HEADER CELL INVASION 29-APR-11 3RRC TITLE CRYSTAL STRUCTURE OF REGION II FROM PLASMODIUM VIVAX DUFFY BINDING TITLE 2 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: DUFFY RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: REGION II (UNP RESIDUES 211-525); COMPND 5 SYNONYM: ERYTHROCYTE-BINDING PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM VIVAX; SOURCE 3 ORGANISM_TAXID: 126793; SOURCE 4 STRAIN: SAI-1; SOURCE 5 GENE: PVDR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DUFFY BINDING LIKE, RECEPTOR RECOGNITION, DUFFY ANTIGEN RECEPTOR FOR KEYWDS 2 CHEMOKINES, CELL INVASION EXPDTA X-RAY DIFFRACTION AUTHOR N.H.TOLIA REVDAT 3 08-NOV-17 3RRC 1 REMARK REVDAT 2 30-NOV-11 3RRC 1 JRNL REVDAT 1 13-JUL-11 3RRC 0 JRNL AUTH J.D.BATCHELOR,J.A.ZAHM,N.H.TOLIA JRNL TITL DIMERIZATION OF PLASMODIUM VIVAX DBP IS INDUCED UPON JRNL TITL 2 RECEPTOR BINDING AND DRIVES RECOGNITION OF DARC. JRNL REF NAT.STRUCT.MOL.BIOL. V. 18 908 2011 JRNL REFN ISSN 1545-9993 JRNL PMID 21743458 JRNL DOI 10.1038/NSMB.2088 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7_650) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 19.050 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 49917 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 2557 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.7043 - 5.0827 0.99 2701 155 0.2311 0.2566 REMARK 3 2 5.0827 - 4.0458 1.00 2648 154 0.1719 0.2014 REMARK 3 3 4.0458 - 3.5377 0.99 2624 154 0.1830 0.2201 REMARK 3 4 3.5377 - 3.2158 1.00 2686 124 0.1793 0.2349 REMARK 3 5 3.2158 - 2.9861 1.00 2612 141 0.1717 0.2315 REMARK 3 6 2.9861 - 2.8106 1.00 2624 170 0.1785 0.2406 REMARK 3 7 2.8106 - 2.6702 1.00 2640 144 0.1780 0.2321 REMARK 3 8 2.6702 - 2.5542 0.99 2630 137 0.1861 0.2577 REMARK 3 9 2.5542 - 2.4561 1.00 2659 136 0.1906 0.2518 REMARK 3 10 2.4561 - 2.3715 1.00 2620 135 0.1900 0.2466 REMARK 3 11 2.3715 - 2.2974 1.00 2605 132 0.1872 0.2388 REMARK 3 12 2.2974 - 2.2318 0.99 2592 155 0.2165 0.2631 REMARK 3 13 2.2318 - 2.1732 1.00 2656 132 0.2190 0.2663 REMARK 3 14 2.1732 - 2.1202 1.00 2624 130 0.2020 0.2679 REMARK 3 15 2.1202 - 2.0721 0.99 2607 141 0.2293 0.2843 REMARK 3 16 2.0721 - 2.0280 0.98 2590 124 0.2503 0.2840 REMARK 3 17 2.0280 - 1.9875 1.00 2617 148 0.2378 0.2925 REMARK 3 18 1.9875 - 1.9500 1.00 2625 145 0.2459 0.2983 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.41 REMARK 3 B_SOL : 49.77 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.070 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.78060 REMARK 3 B22 (A**2) : 4.46610 REMARK 3 B33 (A**2) : -1.13960 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 2.72160 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4771 REMARK 3 ANGLE : 1.066 6378 REMARK 3 CHIRALITY : 0.063 665 REMARK 3 PLANARITY : 0.005 804 REMARK 3 DIHEDRAL : 14.468 1829 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): -50.8239 9.0112 22.1330 REMARK 3 T TENSOR REMARK 3 T11: 0.0784 T22: 0.1605 REMARK 3 T33: 0.0476 T12: -0.0079 REMARK 3 T13: -0.0371 T23: -0.0125 REMARK 3 L TENSOR REMARK 3 L11: 0.8486 L22: 0.3475 REMARK 3 L33: 0.9240 L12: 0.3005 REMARK 3 L13: -0.4239 L23: 0.1177 REMARK 3 S TENSOR REMARK 3 S11: 0.0158 S12: -0.2630 S13: 0.0144 REMARK 3 S21: 0.1036 S22: -0.0679 S23: -0.0071 REMARK 3 S31: -0.0192 S32: 0.2641 S33: 0.0452 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -44.3693 10.3711 78.1746 REMARK 3 T TENSOR REMARK 3 T11: 0.0379 T22: 0.0795 REMARK 3 T33: 0.0358 T12: -0.0246 REMARK 3 T13: -0.0288 T23: 0.0180 REMARK 3 L TENSOR REMARK 3 L11: 0.6175 L22: 0.2035 REMARK 3 L33: 0.9199 L12: -0.1087 REMARK 3 L13: 0.4653 L23: -0.0699 REMARK 3 S TENSOR REMARK 3 S11: 0.0090 S12: 0.0278 S13: -0.0373 REMARK 3 S21: -0.0139 S22: -0.0001 S23: 0.0018 REMARK 3 S31: -0.0285 S32: -0.1066 S33: -0.0095 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3RRC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1000065283. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK MONOCHROMATOR 1: REMARK 200 HIGH-RESOLUTION DOUBLE-CRYSTAL REMARK 200 SAGITTAL FOCUSING, ROSENBAUM- REMARK 200 ROCK MONOCHROMATOR 2: DOUBLE REMARK 200 CRYSTAL, ROSENBAUM-ROCK VERTICAL REMARK 200 FOCUSING MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NOIR-1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49943 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M AMMONIUM PHOSPHATE, 23% REMARK 280 POLYETHYLENE GLYCOL 3350, PH 6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.48500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 209 REMARK 465 VAL A 254 REMARK 465 ASN A 255 REMARK 465 ASN A 256 REMARK 465 THR A 257 REMARK 465 ASP A 258 REMARK 465 THR A 259 REMARK 465 ASN A 260 REMARK 465 PHE A 261 REMARK 465 HIS A 262 REMARK 465 ARG A 263 REMARK 465 ASP A 264 REMARK 465 ILE A 265 REMARK 465 LYS A 366 REMARK 465 LYS A 367 REMARK 465 ARG A 368 REMARK 465 LEU A 369 REMARK 465 LYS A 370 REMARK 465 GLY A 371 REMARK 465 ASN A 372 REMARK 465 PHE A 373 REMARK 465 ILE A 374 REMARK 465 TRP A 375 REMARK 465 ILE A 376 REMARK 465 VAL A 509 REMARK 465 GLU A 510 REMARK 465 GLU A 511 REMARK 465 ALA A 512 REMARK 465 LYS A 513 REMARK 465 LYS A 514 REMARK 465 ASN A 515 REMARK 465 THR A 516 REMARK 465 GLN A 517 REMARK 465 GLU A 518 REMARK 465 VAL A 519 REMARK 465 VAL A 520 REMARK 465 THR A 521 REMARK 465 ASN A 522 REMARK 465 VAL A 523 REMARK 465 ASP A 524 REMARK 465 ASN A 525 REMARK 465 MET B 209 REMARK 465 VAL B 254 REMARK 465 ASN B 255 REMARK 465 ASN B 256 REMARK 465 THR B 257 REMARK 465 ASP B 258 REMARK 465 THR B 259 REMARK 465 ASN B 260 REMARK 465 PHE B 261 REMARK 465 HIS B 262 REMARK 465 ARG B 263 REMARK 465 ASP B 264 REMARK 465 ILE B 265 REMARK 465 THR B 266 REMARK 465 PHE B 267 REMARK 465 ARG B 268 REMARK 465 LYS B 269 REMARK 465 LEU B 270 REMARK 465 LYS B 465 REMARK 465 VAL B 466 REMARK 465 GLN B 467 REMARK 465 VAL B 509 REMARK 465 GLU B 510 REMARK 465 GLU B 511 REMARK 465 ALA B 512 REMARK 465 LYS B 513 REMARK 465 LYS B 514 REMARK 465 ASN B 515 REMARK 465 THR B 516 REMARK 465 GLN B 517 REMARK 465 GLU B 518 REMARK 465 VAL B 519 REMARK 465 VAL B 520 REMARK 465 THR B 521 REMARK 465 ASN B 522 REMARK 465 VAL B 523 REMARK 465 ASP B 524 REMARK 465 ASN B 525 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 267 -27.71 59.39 REMARK 500 TYR A 293 18.71 59.74 REMARK 500 GLU A 320 -70.85 -69.38 REMARK 500 ASP A 339 170.30 -58.32 REMARK 500 LYS A 428 -11.92 -141.58 REMARK 500 LYS A 465 67.20 37.49 REMARK 500 ASN B 211 -130.42 -146.87 REMARK 500 MET B 247 33.01 -140.64 REMARK 500 ASP B 339 178.50 -51.96 REMARK 500 LYS B 370 -137.48 52.39 REMARK 500 ALA B 463 32.41 -86.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 13 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 526 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 12 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 526 DBREF 3RRC A 211 525 UNP P22290 PVDR_PLAVS 211 525 DBREF 3RRC B 211 525 UNP P22290 PVDR_PLAVS 211 525 SEQADV 3RRC MET A 209 UNP P22290 EXPRESSION TAG SEQADV 3RRC GLY A 210 UNP P22290 EXPRESSION TAG SEQADV 3RRC MET B 209 UNP P22290 EXPRESSION TAG SEQADV 3RRC GLY B 210 UNP P22290 EXPRESSION TAG SEQRES 1 A 317 MET GLY ASN THR VAL MET LYS ASN CYS ASN TYR LYS ARG SEQRES 2 A 317 LYS ARG ARG GLU ARG ASP TRP ASP CYS ASN THR LYS LYS SEQRES 3 A 317 ASP VAL CYS ILE PRO ASP ARG ARG TYR GLN LEU CYS MET SEQRES 4 A 317 LYS GLU LEU THR ASN LEU VAL ASN ASN THR ASP THR ASN SEQRES 5 A 317 PHE HIS ARG ASP ILE THR PHE ARG LYS LEU TYR LEU LYS SEQRES 6 A 317 ARG LYS LEU ILE TYR ASP ALA ALA VAL GLU GLY ASP LEU SEQRES 7 A 317 LEU LEU LYS LEU ASN ASN TYR ARG TYR ASN LYS ASP PHE SEQRES 8 A 317 CYS LYS ASP ILE ARG TRP SER LEU GLY ASP PHE GLY ASP SEQRES 9 A 317 ILE ILE MET GLY THR ASP MET GLU GLY ILE GLY TYR SER SEQRES 10 A 317 LYS VAL VAL GLU ASN ASN LEU ARG SER ILE PHE GLY THR SEQRES 11 A 317 ASP GLU LYS ALA GLN GLN ARG ARG LYS GLN TRP TRP ASN SEQRES 12 A 317 GLU SER LYS ALA GLN ILE TRP THR ALA MET MET TYR SER SEQRES 13 A 317 VAL LYS LYS ARG LEU LYS GLY ASN PHE ILE TRP ILE CYS SEQRES 14 A 317 LYS LEU ASN VAL ALA VAL ASN ILE GLU PRO GLN ILE TYR SEQRES 15 A 317 ARG TRP ILE ARG GLU TRP GLY ARG ASP TYR VAL SER GLU SEQRES 16 A 317 LEU PRO THR GLU VAL GLN LYS LEU LYS GLU LYS CYS ASP SEQRES 17 A 317 GLY LYS ILE ASN TYR THR ASP LYS LYS VAL CYS LYS VAL SEQRES 18 A 317 PRO PRO CYS GLN ASN ALA CYS LYS SER TYR ASP GLN TRP SEQRES 19 A 317 ILE THR ARG LYS LYS ASN GLN TRP ASP VAL LEU SER ASN SEQRES 20 A 317 LYS PHE ILE SER VAL LYS ASN ALA GLU LYS VAL GLN THR SEQRES 21 A 317 ALA GLY ILE VAL THR PRO TYR ASP ILE LEU LYS GLN GLU SEQRES 22 A 317 LEU ASP GLU PHE ASN GLU VAL ALA PHE GLU ASN GLU ILE SEQRES 23 A 317 ASN LYS ARG ASP GLY ALA TYR ILE GLU LEU CYS VAL CYS SEQRES 24 A 317 SER VAL GLU GLU ALA LYS LYS ASN THR GLN GLU VAL VAL SEQRES 25 A 317 THR ASN VAL ASP ASN SEQRES 1 B 317 MET GLY ASN THR VAL MET LYS ASN CYS ASN TYR LYS ARG SEQRES 2 B 317 LYS ARG ARG GLU ARG ASP TRP ASP CYS ASN THR LYS LYS SEQRES 3 B 317 ASP VAL CYS ILE PRO ASP ARG ARG TYR GLN LEU CYS MET SEQRES 4 B 317 LYS GLU LEU THR ASN LEU VAL ASN ASN THR ASP THR ASN SEQRES 5 B 317 PHE HIS ARG ASP ILE THR PHE ARG LYS LEU TYR LEU LYS SEQRES 6 B 317 ARG LYS LEU ILE TYR ASP ALA ALA VAL GLU GLY ASP LEU SEQRES 7 B 317 LEU LEU LYS LEU ASN ASN TYR ARG TYR ASN LYS ASP PHE SEQRES 8 B 317 CYS LYS ASP ILE ARG TRP SER LEU GLY ASP PHE GLY ASP SEQRES 9 B 317 ILE ILE MET GLY THR ASP MET GLU GLY ILE GLY TYR SER SEQRES 10 B 317 LYS VAL VAL GLU ASN ASN LEU ARG SER ILE PHE GLY THR SEQRES 11 B 317 ASP GLU LYS ALA GLN GLN ARG ARG LYS GLN TRP TRP ASN SEQRES 12 B 317 GLU SER LYS ALA GLN ILE TRP THR ALA MET MET TYR SER SEQRES 13 B 317 VAL LYS LYS ARG LEU LYS GLY ASN PHE ILE TRP ILE CYS SEQRES 14 B 317 LYS LEU ASN VAL ALA VAL ASN ILE GLU PRO GLN ILE TYR SEQRES 15 B 317 ARG TRP ILE ARG GLU TRP GLY ARG ASP TYR VAL SER GLU SEQRES 16 B 317 LEU PRO THR GLU VAL GLN LYS LEU LYS GLU LYS CYS ASP SEQRES 17 B 317 GLY LYS ILE ASN TYR THR ASP LYS LYS VAL CYS LYS VAL SEQRES 18 B 317 PRO PRO CYS GLN ASN ALA CYS LYS SER TYR ASP GLN TRP SEQRES 19 B 317 ILE THR ARG LYS LYS ASN GLN TRP ASP VAL LEU SER ASN SEQRES 20 B 317 LYS PHE ILE SER VAL LYS ASN ALA GLU LYS VAL GLN THR SEQRES 21 B 317 ALA GLY ILE VAL THR PRO TYR ASP ILE LEU LYS GLN GLU SEQRES 22 B 317 LEU ASP GLU PHE ASN GLU VAL ALA PHE GLU ASN GLU ILE SEQRES 23 B 317 ASN LYS ARG ASP GLY ALA TYR ILE GLU LEU CYS VAL CYS SEQRES 24 B 317 SER VAL GLU GLU ALA LYS LYS ASN THR GLN GLU VAL VAL SEQRES 25 B 317 THR ASN VAL ASP ASN HET EDO A 2 10 HET EDO A 3 10 HET EDO A 5 10 HET EDO A 6 10 HET EDO A 7 10 HET EDO A 13 10 HET PO4 A 1 5 HET PO4 A 526 5 HET EDO B 1 10 HET EDO B 4 10 HET EDO B 9 10 HET EDO B 11 10 HET EDO B 12 10 HET PO4 B 3 5 HET PO4 B 526 5 HETNAM EDO 1,2-ETHANEDIOL HETNAM PO4 PHOSPHATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 11(C2 H6 O2) FORMUL 9 PO4 4(O4 P 3-) FORMUL 18 HOH *364(H2 O) HELIX 1 1 MET A 214 ASN A 218 5 5 HELIX 2 2 PRO A 239 LEU A 245 1 7 HELIX 3 3 MET A 247 ASN A 252 1 6 HELIX 4 4 PHE A 267 ASN A 291 1 25 HELIX 5 5 ASN A 296 GLY A 316 1 21 HELIX 6 6 GLY A 323 GLY A 337 1 15 HELIX 7 7 LYS A 341 MET A 362 1 22 HELIX 8 8 LYS A 378 ASN A 384 1 7 HELIX 9 9 PRO A 387 ASP A 416 1 30 HELIX 10 10 LYS A 424 LYS A 428 5 5 HELIX 11 11 VAL A 429 LYS A 465 1 37 HELIX 12 12 THR A 473 LEU A 482 1 10 HELIX 13 13 ASN A 486 ASN A 495 1 10 HELIX 14 14 ASP A 498 VAL A 506 1 9 HELIX 15 15 MET B 214 ASN B 218 5 5 HELIX 16 16 PRO B 239 GLN B 244 1 6 HELIX 17 17 MET B 247 LEU B 253 1 7 HELIX 18 18 TYR B 271 ASN B 291 1 21 HELIX 19 19 ASN B 296 GLY B 316 1 21 HELIX 20 20 GLY B 323 GLY B 337 1 15 HELIX 21 21 LYS B 341 MET B 362 1 22 HELIX 22 22 MET B 362 LYS B 370 1 9 HELIX 23 23 GLY B 371 ILE B 376 5 6 HELIX 24 24 LYS B 378 VAL B 383 1 6 HELIX 25 25 PRO B 387 ASP B 416 1 30 HELIX 26 26 LYS B 424 VAL B 429 1 6 HELIX 27 27 VAL B 429 ALA B 463 1 35 HELIX 28 28 THR B 473 LEU B 482 1 10 HELIX 29 29 ASN B 486 ASN B 495 1 10 HELIX 30 30 ASP B 498 VAL B 506 1 9 SSBOND 1 CYS A 217 CYS A 246 1555 1555 2.05 SSBOND 2 CYS A 230 CYS A 237 1555 1555 2.05 SSBOND 3 CYS A 300 CYS A 377 1555 1555 2.04 SSBOND 4 CYS A 415 CYS A 432 1555 1555 2.09 SSBOND 5 CYS A 427 CYS A 507 1555 1555 2.04 SSBOND 6 CYS A 436 CYS A 505 1555 1555 2.07 SSBOND 7 CYS B 217 CYS B 246 1555 1555 2.05 SSBOND 8 CYS B 230 CYS B 237 1555 1555 2.05 SSBOND 9 CYS B 300 CYS B 377 1555 1555 2.08 SSBOND 10 CYS B 415 CYS B 432 1555 1555 2.06 SSBOND 11 CYS B 427 CYS B 507 1555 1555 2.05 SSBOND 12 CYS B 436 CYS B 505 1555 1555 2.08 SITE 1 AC1 5 EDO A 13 HOH A 166 LEU A 404 ASN A 486 SITE 2 AC1 5 GLU A 493 SITE 1 AC2 8 HOH A 49 HOH A 50 HOH A 206 ASP A 312 SITE 2 AC2 8 GLY A 316 THR A 317 ASP A 318 GLU A 329 SITE 1 AC3 5 EDO A 6 HOH A 61 HOH A 85 SER A 454 SITE 2 AC3 5 TYR A 475 SITE 1 AC4 7 EDO A 5 LYS A 447 ASP A 451 GLU A 491 SITE 2 AC4 7 ILE A 494 ASN A 495 HOH B 46 SITE 1 AC5 5 ARG A 221 ARG A 223 ARG A 241 GLN A 244 SITE 2 AC5 5 LEU A 290 SITE 1 AC6 4 EDO A 2 HOH A 159 ALA A 489 GLU A 493 SITE 1 AC7 5 LYS A 273 GLN A 356 HOH B 115 ARG B 274 SITE 2 AC7 5 ILE B 277 SITE 1 AC8 6 GLN A 356 HOH A 563 HOH A 601 LYS B 273 SITE 2 AC8 6 ARG B 274 GLN B 356 SITE 1 AC9 5 HOH B 108 LEU B 404 ASN B 486 ALA B 489 SITE 2 AC9 5 GLU B 493 SITE 1 BC1 6 HOH B 20 HOH B 33 GLY B 316 THR B 317 SITE 2 BC1 6 ASP B 318 LYS B 326 SITE 1 BC2 5 HOH B 46 HOH B 141 SER B 454 TYR B 475 SITE 2 BC2 5 HOH B 578 SITE 1 BC3 6 HOH B 91 ARG B 221 LYS B 222 ARG B 223 SITE 2 BC3 6 ARG B 241 GLN B 244 SITE 1 BC4 4 GLY B 470 ASP B 476 LYS B 479 GLN B 480 SITE 1 BC5 2 ASN B 351 LYS B 354 SITE 1 BC6 5 HOH B 179 THR B 212 VAL B 213 MET B 214 SITE 2 BC6 5 LYS B 215 CRYST1 59.500 66.970 91.830 90.00 108.06 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016807 0.000000 0.005479 0.00000 SCALE2 0.000000 0.014932 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011454 0.00000