HEADER PROTON TRANSPORT 29-APR-11 3RRK TITLE CRYSTAL STRUCTURE OF THE CYTOPLASMIC N-TERMINAL DOMAIN OF SUBUNIT I, TITLE 2 HOMOLOG OF SUBUNIT A, OF V-ATPASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: V-TYPE ATPASE 116 KDA SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-344; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MEIOTHERMUS RUBER; SOURCE 3 ORGANISM_TAXID: 504728; SOURCE 4 STRAIN: DSM 1279; SOURCE 5 ATCC: 35948; SOURCE 6 GENE: MRUB_0956; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET44-EK/LIC KEYWDS ALPHA BETA FOLD, PROTON PUMP, SUBUNIT I/A, V-ATPASE, PROTON TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR S.SRINIVASAN,N.K.VYAS,M.L.BAKER,F.A.QUIOCHO REVDAT 4 03-APR-24 3RRK 1 REMARK REVDAT 3 28-FEB-24 3RRK 1 REMARK REVDAT 2 30-NOV-11 3RRK 1 JRNL REVDAT 1 10-AUG-11 3RRK 0 JRNL AUTH S.SRINIVASAN,N.K.VYAS,M.L.BAKER,F.A.QUIOCHO JRNL TITL CRYSTAL STRUCTURE OF THE CYTOPLASMIC N-TERMINAL DOMAIN OF JRNL TITL 2 SUBUNIT I, A HOMOLOG OF SUBUNIT A, OF V-ATPASE. JRNL REF J.MOL.BIOL. V. 412 14 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21787787 JRNL DOI 10.1016/J.JMB.2011.07.014 REMARK 2 REMARK 2 RESOLUTION. 2.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 3 NUMBER OF REFLECTIONS : 14998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 753 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.6200 - 4.5126 0.90 2898 153 0.1732 0.2209 REMARK 3 2 4.5126 - 3.5825 0.96 2987 159 0.1707 0.2668 REMARK 3 3 3.5825 - 3.1299 0.95 2929 154 0.2069 0.2822 REMARK 3 4 3.1299 - 2.8438 0.92 2807 150 0.2358 0.2841 REMARK 3 5 2.8438 - 2.6400 0.86 2624 137 0.2697 0.3020 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.06 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 67.36 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 9.33000 REMARK 3 B22 (A**2) : 7.14860 REMARK 3 B33 (A**2) : -16.47860 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2378 REMARK 3 ANGLE : 1.096 3211 REMARK 3 CHIRALITY : 0.065 363 REMARK 3 PLANARITY : 0.004 416 REMARK 3 DIHEDRAL : 15.230 929 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESSEQ 1:13 REMARK 3 ORIGIN FOR THE GROUP (A): 15.4195 -12.5647 102.0961 REMARK 3 T TENSOR REMARK 3 T11: 0.5062 T22: 0.6347 REMARK 3 T33: 0.6862 T12: -0.0905 REMARK 3 T13: -0.2273 T23: 0.3390 REMARK 3 L TENSOR REMARK 3 L11: 0.8201 L22: -0.0037 REMARK 3 L33: 0.8834 L12: -0.1586 REMARK 3 L13: -0.0521 L23: -0.0993 REMARK 3 S TENSOR REMARK 3 S11: -0.3550 S12: 0.6884 S13: 1.6540 REMARK 3 S21: 0.4888 S22: 0.2107 S23: -0.2734 REMARK 3 S31: -1.6628 S32: -0.6006 S33: -0.0047 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESSEQ 14:31 REMARK 3 ORIGIN FOR THE GROUP (A): 12.8093 -13.1495 109.1321 REMARK 3 T TENSOR REMARK 3 T11: 1.1780 T22: 0.6973 REMARK 3 T33: 0.6412 T12: 0.0664 REMARK 3 T13: 0.1051 T23: 0.2032 REMARK 3 L TENSOR REMARK 3 L11: 0.5258 L22: 0.6642 REMARK 3 L33: 0.8878 L12: -0.7071 REMARK 3 L13: -0.1618 L23: 0.1067 REMARK 3 S TENSOR REMARK 3 S11: 1.0155 S12: -0.3006 S13: 0.2725 REMARK 3 S21: -0.1494 S22: -0.6416 S23: -0.2077 REMARK 3 S31: -1.4884 S32: -0.5795 S33: -0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESSEQ 32:57 REMARK 3 ORIGIN FOR THE GROUP (A): 16.2771 -12.4430 84.5784 REMARK 3 T TENSOR REMARK 3 T11: 0.6173 T22: 0.5981 REMARK 3 T33: 0.4718 T12: 0.0928 REMARK 3 T13: 0.0632 T23: 0.0409 REMARK 3 L TENSOR REMARK 3 L11: 0.9480 L22: 0.7306 REMARK 3 L33: 1.8879 L12: -0.9723 REMARK 3 L13: -1.4199 L23: 0.5656 REMARK 3 S TENSOR REMARK 3 S11: -0.1333 S12: -0.1126 S13: -0.0603 REMARK 3 S21: 0.5724 S22: -0.5477 S23: -0.0709 REMARK 3 S31: 0.7177 S32: -0.0170 S33: 0.0006 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND RESSEQ 58:105 REMARK 3 ORIGIN FOR THE GROUP (A): 14.1463 10.1380 75.2261 REMARK 3 T TENSOR REMARK 3 T11: 0.2790 T22: 0.4977 REMARK 3 T33: 0.3367 T12: 0.1696 REMARK 3 T13: -0.0050 T23: -0.0760 REMARK 3 L TENSOR REMARK 3 L11: 0.2909 L22: 2.5554 REMARK 3 L33: 3.0444 L12: -0.9172 REMARK 3 L13: 0.4121 L23: -1.7082 REMARK 3 S TENSOR REMARK 3 S11: -0.0995 S12: -0.3978 S13: 0.3994 REMARK 3 S21: 0.3820 S22: 0.1721 S23: 0.0259 REMARK 3 S31: -0.2270 S32: -0.3772 S33: -0.0003 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND RESSEQ 106:128 REMARK 3 ORIGIN FOR THE GROUP (A): 38.6091 31.7951 59.4192 REMARK 3 T TENSOR REMARK 3 T11: 0.4941 T22: 0.2166 REMARK 3 T33: 0.5410 T12: 0.0502 REMARK 3 T13: -0.0878 T23: 0.1258 REMARK 3 L TENSOR REMARK 3 L11: 5.6138 L22: 2.1313 REMARK 3 L33: 5.9776 L12: 2.6161 REMARK 3 L13: -2.9852 L23: -1.6031 REMARK 3 S TENSOR REMARK 3 S11: 1.1131 S12: 0.5187 S13: 1.7352 REMARK 3 S21: 0.6466 S22: -0.1277 S23: 0.5767 REMARK 3 S31: -1.7552 S32: -1.2934 S33: 0.1649 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND RESSEQ 129:181 REMARK 3 ORIGIN FOR THE GROUP (A): 56.1924 33.8664 53.9360 REMARK 3 T TENSOR REMARK 3 T11: 0.7024 T22: 0.5697 REMARK 3 T33: 0.6485 T12: -0.1659 REMARK 3 T13: -0.0472 T23: 0.1288 REMARK 3 L TENSOR REMARK 3 L11: 3.6488 L22: 2.2348 REMARK 3 L33: 3.7792 L12: -0.5788 REMARK 3 L13: 0.7485 L23: -3.0246 REMARK 3 S TENSOR REMARK 3 S11: 0.0397 S12: 0.3736 S13: 0.5159 REMARK 3 S21: -0.3903 S22: -0.3863 S23: -0.3271 REMARK 3 S31: -0.7291 S32: 0.5493 S33: 0.0004 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND RESSEQ 182:210 REMARK 3 ORIGIN FOR THE GROUP (A): 52.5606 24.2240 55.0855 REMARK 3 T TENSOR REMARK 3 T11: 0.6579 T22: 0.5443 REMARK 3 T33: 0.6479 T12: -0.1474 REMARK 3 T13: -0.0422 T23: 0.0785 REMARK 3 L TENSOR REMARK 3 L11: 0.5659 L22: 0.2038 REMARK 3 L33: 1.4063 L12: -0.2231 REMARK 3 L13: 0.2799 L23: -0.5644 REMARK 3 S TENSOR REMARK 3 S11: 0.2347 S12: 0.2733 S13: -1.2243 REMARK 3 S21: -0.4735 S22: -0.2498 S23: -0.1223 REMARK 3 S31: 0.3769 S32: 0.1823 S33: 0.0012 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN A AND RESSEQ 211:260 REMARK 3 ORIGIN FOR THE GROUP (A): 18.7944 19.2220 70.0513 REMARK 3 T TENSOR REMARK 3 T11: -0.0656 T22: 0.0638 REMARK 3 T33: 0.0751 T12: 0.2385 REMARK 3 T13: -0.1872 T23: -0.0427 REMARK 3 L TENSOR REMARK 3 L11: 1.2052 L22: 3.8127 REMARK 3 L33: 2.9570 L12: -0.8022 REMARK 3 L13: 1.0982 L23: -0.3275 REMARK 3 S TENSOR REMARK 3 S11: 0.0053 S12: -0.1388 S13: 0.5151 REMARK 3 S21: 0.3750 S22: 0.2006 S23: 0.7984 REMARK 3 S31: -0.5135 S32: -0.4847 S33: 0.0078 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN A AND RESSEQ 261:301 REMARK 3 ORIGIN FOR THE GROUP (A): 12.8934 -9.5135 98.5971 REMARK 3 T TENSOR REMARK 3 T11: 0.8162 T22: 0.7918 REMARK 3 T33: 0.5971 T12: 0.2957 REMARK 3 T13: 0.0769 T23: 0.2572 REMARK 3 L TENSOR REMARK 3 L11: 0.0176 L22: 0.2118 REMARK 3 L33: 1.9259 L12: 0.2358 REMARK 3 L13: -0.0893 L23: -1.0614 REMARK 3 S TENSOR REMARK 3 S11: -0.1856 S12: -0.2201 S13: -0.0854 REMARK 3 S21: 0.7885 S22: 0.2800 S23: -0.1969 REMARK 3 S31: -0.6549 S32: -0.4109 S33: -0.0008 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: PHENIX, TLS GROUP REFINEMENT REMARK 4 REMARK 4 3RRK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1000065291. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-AUG-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK HIGH-RESOLUTION REMARK 200 DOUBLE-CRYSTAL MONOCHROMATOR. REMARK 200 LN2 COOLED FIRST CRYSTAL, REMARK 200 SAGITTAL FOCUSING 2ND CRYSTAL REMARK 200 OPTICS : MIRRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16308 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.640 REMARK 200 RESOLUTION RANGE LOW (A) : 39.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : 0.04900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 29.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.46900 REMARK 200 R SYM FOR SHELL (I) : 0.46900 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: SAD PHASING REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 0.8 M SODIUM REMARK 280 -POTASSIUM TRTARATE, 0.1 M CHES, PH 9.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 38.16000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.09050 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 69.53100 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 38.16000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.09050 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 69.53100 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 38.16000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 51.09050 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 69.53100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 38.16000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 51.09050 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 69.53100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -12 REMARK 465 SER A -11 REMARK 465 ALA A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 THR A -6 REMARK 465 ILE A -5 REMARK 465 ASP A -4 REMARK 465 ASP A -3 REMARK 465 ASP A -2 REMARK 465 ASP A -1 REMARK 465 LYS A 0 REMARK 465 THR A 302 REMARK 465 PHE A 303 REMARK 465 GLU A 304 REMARK 465 PRO A 305 REMARK 465 VAL A 306 REMARK 465 ASP A 307 REMARK 465 GLU A 308 REMARK 465 HIS A 309 REMARK 465 HIS A 310 REMARK 465 GLU A 311 REMARK 465 SER A 312 REMARK 465 HIS A 313 REMARK 465 GLN A 314 REMARK 465 VAL A 315 REMARK 465 PRO A 316 REMARK 465 VAL A 317 REMARK 465 THR A 318 REMARK 465 LEU A 319 REMARK 465 GLU A 320 REMARK 465 ASN A 321 REMARK 465 PRO A 322 REMARK 465 ALA A 323 REMARK 465 TRP A 324 REMARK 465 ALA A 325 REMARK 465 LYS A 326 REMARK 465 PRO A 327 REMARK 465 PHE A 328 REMARK 465 GLU A 329 REMARK 465 LEU A 330 REMARK 465 LEU A 331 REMARK 465 HIS A 332 REMARK 465 GLY A 333 REMARK 465 PHE A 334 REMARK 465 LEU A 335 REMARK 465 ASN A 336 REMARK 465 THR A 337 REMARK 465 PRO A 338 REMARK 465 ALA A 339 REMARK 465 TYR A 340 REMARK 465 GLY A 341 REMARK 465 SER A 342 REMARK 465 HIS A 343 REMARK 465 ASP A 344 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 160 -112.62 57.61 REMARK 500 ARG A 162 55.09 -95.37 REMARK 500 ASN A 172 -52.98 -122.49 REMARK 500 ALA A 291 40.17 -74.18 REMARK 500 ARG A 294 -25.63 92.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NHE A 540 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NHE A 520 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 345 DBREF 3RRK A 1 344 UNP D3PQI8 D3PQI8_MEIRD 1 344 SEQRES 1 A 357 GLY SER ALA GLY SER GLY THR ILE ASP ASP ASP ASP LYS SEQRES 2 A 357 MET GLU LYS LEU ILE VAL ALA GLY PRO LYS ARG LEU ALA SEQRES 3 A 357 ARG GLU LEU LEU ALA GLU LEU GLN LYS ALA GLY VAL VAL SEQRES 4 A 357 HIS ILE ASP PRO LEU ARG PRO ASP GLU LEU GLY GLU TYR SEQRES 5 A 357 ARG LEU SER PRO THR GLU GLU ALA GLU LEU LYS ARG TRP SEQRES 6 A 357 GLU ALA VAL VAL SER GLN ALA GLU GLN SER LEU THR VAL SEQRES 7 A 357 VAL GLY LEU ALA THR VAL PRO SER SER LYS PRO PHE THR SEQRES 8 A 357 GLY SER LEU GLU GLU ALA GLU ALA VAL LEU ARG PRO VAL SEQRES 9 A 357 ALA SER ARG ALA GLU VAL LEU GLY LYS GLU ARG ALA ALA SEQRES 10 A 357 LEU GLU GLU GLU ILE GLN THR ILE GLU LEU PHE GLY LYS SEQRES 11 A 357 ALA ALA GLU LYS LEU ALA ALA LEU ALA HIS GLY LEU ASP SEQRES 12 A 357 GLU SER PRO ARG LEU GLY VAL ILE PRO PHE LEU VAL ALA SEQRES 13 A 357 LYS PRO GLU GLU LEU GLU ALA VAL ARG LYS ALA LEU GLN SEQRES 14 A 357 GLU ALA LEU ALA ASP ARG PHE VAL LEU GLU ALA GLU PRO SEQRES 15 A 357 LEU GLU ASN GLN LEU ALA ALA LEU VAL VAL VAL LYS ARG SEQRES 16 A 357 SER GLU LEU GLU ALA ALA ARG SER SER LEU SER ARG LEU SEQRES 17 A 357 GLY LEU ALA GLU LEU ARG PHE PRO GLY ALA TYR GLY ALA SEQRES 18 A 357 MET PRO LEU GLY LYS ALA ALA ALA ARG MET LYS GLU ARG SEQRES 19 A 357 ALA ARG LEU ALA PRO GLU GLU LEU VAL GLY ILE ARG GLU SEQRES 20 A 357 GLU VAL ALA ARG LEU SER ARG GLU SER GLY GLU ALA LEU SEQRES 21 A 357 ILE ALA LEU TRP THR ARG ALA LYS ASP GLU VAL ALA ARG SEQRES 22 A 357 TYR LYS ALA VAL ALA ASP MET ALA ALA GLY LYS TYR GLY SEQRES 23 A 357 ALA ALA LEU MET GLY TRP VAL PRO GLN LYS ALA LYS GLY SEQRES 24 A 357 LYS VAL GLU GLU ALA LEU GLY ARG LEU ARG ASP GLN ILE SEQRES 25 A 357 VAL TYR THR PHE GLU PRO VAL ASP GLU HIS HIS GLU SER SEQRES 26 A 357 HIS GLN VAL PRO VAL THR LEU GLU ASN PRO ALA TRP ALA SEQRES 27 A 357 LYS PRO PHE GLU LEU LEU HIS GLY PHE LEU ASN THR PRO SEQRES 28 A 357 ALA TYR GLY SER HIS ASP HET NHE A 540 13 HET NHE A 520 13 HET SO4 A 345 5 HETNAM NHE 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID HETNAM SO4 SULFATE ION HETSYN NHE N-CYCLOHEXYLTAURINE; CHES FORMUL 2 NHE 2(C8 H17 N O3 S) FORMUL 4 SO4 O4 S 2- FORMUL 5 HOH *38(H2 O) HELIX 1 1 PRO A 9 ARG A 11 5 3 HELIX 2 2 LEU A 12 GLY A 24 1 13 HELIX 3 3 ARG A 32 ARG A 40 5 9 HELIX 4 4 SER A 42 GLY A 67 1 26 HELIX 5 5 SER A 80 ALA A 126 1 47 HELIX 6 6 LYS A 144 ALA A 160 1 17 HELIX 7 7 GLU A 184 ARG A 194 1 11 HELIX 8 8 PRO A 203 MET A 209 5 7 HELIX 9 9 PRO A 210 ALA A 269 1 60 HELIX 10 10 ALA A 284 ALA A 291 1 8 SHEET 1 A 4 VAL A 26 LEU A 31 0 SHEET 2 A 4 ALA A 274 VAL A 280 -1 O ALA A 275 N LEU A 31 SHEET 3 A 4 GLU A 2 GLY A 8 -1 N LEU A 4 O GLY A 278 SHEET 4 A 4 ASP A 297 VAL A 300 -1 O ASP A 297 N ALA A 7 SHEET 1 B 3 LEU A 135 VAL A 142 0 SHEET 2 B 3 LEU A 174 LYS A 181 -1 O LEU A 174 N VAL A 142 SHEET 3 B 3 VAL A 164 PRO A 169 -1 N GLU A 168 O ALA A 175 SITE 1 AC1 7 GLU A 113 LEU A 114 PHE A 115 LEU A 141 SITE 2 AC1 7 GLU A 171 ASN A 172 GLN A 173 SITE 1 AC2 4 LYS A 10 ALA A 13 ARG A 162 LYS A 181 SITE 1 AC3 5 ILE A 112 GLY A 116 LYS A 117 GLU A 120 SITE 2 AC3 5 LYS A 219 CRYST1 76.320 102.181 139.062 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013103 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009787 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007191 0.00000