HEADER SUGAR BINDING PROTEIN/ANTIBIOTIC 05-MAY-11 3RUM TITLE NEW STRATEGY TO ANALYZE STRUCTURES OF GLYCOPEPTIDE ANTIBIOTIC-TARGET TITLE 2 COMPLEXES COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALTOSE-BINDING PERIPLASMIC PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 27-392; COMPND 5 SYNONYM: MBP, MMBP, MALTODEXTRIN-BINDING PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RISTOCETIN; COMPND 9 CHAIN: B, C SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: MALE, B4034, JW3994; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: AMYCOLATOPSIS LURIDA; SOURCE 10 ORGANISM_TAXID: 31959 KEYWDS ANTIBIOTIC, GLYCOPEPTIDE, NATIVE PROTEIN LIGATION, FUSION, KEYWDS 2 CARBOXYMETHYLATION OF CYSTEINE, RISTOCETIN, SUGAR BINDING PROTEIN- KEYWDS 3 ANTIBIOTIC COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR N.J.ECONOMOU,S.D.WEEKS,K.C.GRASTY,V.NAHOUM,P.J.LOLL REVDAT 5 06-DEC-23 3RUM 1 LINK REVDAT 4 13-SEP-23 3RUM 1 HETSYN REVDAT 3 29-JUL-20 3RUM 1 COMPND REMARK SEQADV SEQRES REVDAT 3 2 1 HET HETNAM HETSYN FORMUL REVDAT 3 3 1 LINK SITE ATOM REVDAT 2 17-FEB-16 3RUM 1 HET HETATM LINK REVDAT 1 06-JUN-12 3RUM 0 JRNL AUTH N.J.ECONOMOU,V.NAHOUM,S.D.WEEKS,K.C.GRASTY,I.J.ZENTNER, JRNL AUTH 2 T.M.TOWNSEND,M.W.BHUIYA,S.COCKLIN,P.J.LOLL JRNL TITL A CARRIER PROTEIN STRATEGY YIELDS THE STRUCTURE OF JRNL TITL 2 DALBAVANCIN. JRNL REF J.AM.CHEM.SOC. V. 134 4637 2012 JRNL REFN ISSN 0002-7863 JRNL PMID 22352468 JRNL DOI 10.1021/JA208755J REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.2_432 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 33176 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1702 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.4172 - 3.9774 0.98 3364 197 0.1609 0.1831 REMARK 3 2 3.9774 - 3.1614 0.99 3285 173 0.1555 0.2133 REMARK 3 3 3.1614 - 2.7631 1.00 3266 153 0.1812 0.2112 REMARK 3 4 2.7631 - 2.5110 1.00 3265 150 0.1808 0.2179 REMARK 3 5 2.5110 - 2.3314 1.00 3221 188 0.1734 0.2347 REMARK 3 6 2.3314 - 2.1941 0.99 3182 190 0.1810 0.2466 REMARK 3 7 2.1941 - 2.0843 0.99 3181 185 0.1817 0.2204 REMARK 3 8 2.0843 - 1.9937 0.97 3119 171 0.2021 0.2448 REMARK 3 9 1.9937 - 1.9170 0.92 2995 149 0.2217 0.3144 REMARK 3 10 1.9170 - 1.8509 0.81 2591 146 0.2486 0.2854 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.72 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 50.06 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.080 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.11200 REMARK 3 B22 (A**2) : -4.01710 REMARK 3 B33 (A**2) : 7.12910 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3357 REMARK 3 ANGLE : 1.230 4600 REMARK 3 CHIRALITY : 0.075 519 REMARK 3 PLANARITY : 0.006 567 REMARK 3 DIHEDRAL : 12.305 1267 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3RUM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1000065396. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33176 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 19.420 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 200 DATA REDUNDANCY : 4.060 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1ANF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% ISOPROPANOL, 2M AMMONIUM SULFATE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.91650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.38900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.50250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.38900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.91650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.50250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 RISTOCETIN IS A TETRACYCLIC GLYCOPEPTIDE. THE SCAFFOLD IS REMARK 400 A HEPTAPEPTIDE WITH THE CONFIGURATION D-L-L-D-D-L-L. IT IS REMARK 400 FURTHER GLYCOSYLATED BY A TETRASACCHARIDE MADE OF D-GLUCOSE REMARK 400 L-RHAMNOSE, D-MANNOSE, AND D-ARABINOFURANOSE, AND REMARK 400 MONSACCHARIDES RISTOSAMINE AND D-MANNOSE. REMARK 400 HERE, RISTOCETIN IS REPRESENTED BY GROUPING TOGETHER THE REMARK 400 SEQUENCE (SEQRES) AND THE SIX LIGANDS (HET) BGC, RAM, REMARK 400 MAN, BXY, RST, AND MAN. REMARK 400 REMARK 400 GROUP: 1 REMARK 400 NAME: RISTOCETIN REMARK 400 CHAIN: B, C REMARK 400 COMPONENT_1: PEPTIDE LIKE SEQUENCE RESIDUES 1 TO 7 REMARK 400 COMPONENT_2: SUGAR (4-MER) 8, 9, 10, 11 REMARK 400 COMPONENT_3: SUGAR (RISTOSAMINE) 12 REMARK 400 COMPONENT_4: SUGAR (ALPHA-D-MANNOSE) 13 REMARK 400 DESCRIPTION: RISTOCETIN IS A TETRACYCLIC GLYCOPEPTIDE, REMARK 400 GLYCOSYLATED BY A TETRASACCHARIDE (RESIDUES 8, REMARK 400 9, 10, AND 11) ON RESIDUE 4, A MONOSACCHARIDE REMARK 400 ON RESIDUE 6 (RESIDUE 12), AND A MONOSACCHARIDE REMARK 400 ON RESIDUE 7 (RESIDUE 13). REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 CCS A 375 CD CE OZ1 OZ2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 56 44.40 -85.55 REMARK 500 LEU A 123 80.10 -153.41 REMARK 500 ALA A 169 -78.17 -82.80 REMARK 500 MP4 B 3 -51.15 -122.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ANF RELATED DB: PDB REMARK 900 MALTODEXTRIN BINDING PROTEIN WITH BOUND MALTOSE REMARK 900 RELATED ID: 3RUL RELATED DB: PDB REMARK 900 RELATED ID: 3RUN RELATED DB: PDB REMARK 900 RELATED ID: 3VFJ RELATED DB: PDB REMARK 900 RELATED ID: 3VFK RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE AUTHORS STATE THAT THESE RESIDUES ARE LIGATED NON-RECOMBINANTLY REMARK 999 WITH NATIVE PROTEIN LIGATION AFTER PROTEIN EXPRESSION AND REMARK 999 PURIFICATION. DBREF 3RUM A 2 367 UNP P0AEX9 MALE_ECOLI 27 392 DBREF 3RUM B 1 7 PDB 3RUM 3RUM 1 7 DBREF 3RUM C 1 7 PDB 3RUM 3RUM 1 7 SEQADV 3RUM MET A 1 UNP P0AEX9 INITIATING METHIONINE SEQADV 3RUM ASN A 368 UNP P0AEX9 SEE REMARK 999 SEQADV 3RUM ALA A 369 UNP P0AEX9 SEE REMARK 999 SEQADV 3RUM ALA A 370 UNP P0AEX9 SEE REMARK 999 SEQADV 3RUM ALA A 371 UNP P0AEX9 SEE REMARK 999 SEQADV 3RUM ALA A 372 UNP P0AEX9 SEE REMARK 999 SEQADV 3RUM ALA A 373 UNP P0AEX9 SEE REMARK 999 SEQADV 3RUM GLY A 374 UNP P0AEX9 SEE REMARK 999 SEQADV 3RUM CCS A 375 UNP P0AEX9 SEE REMARK 999 SEQADV 3RUM LYS A 376 UNP P0AEX9 SEE REMARK 999 SEQADV 3RUM DAL A 377 UNP P0AEX9 SEE REMARK 999 SEQADV 3RUM DAL A 378 UNP P0AEX9 SEE REMARK 999 SEQRES 1 A 378 MET LYS ILE GLU GLU GLY LYS LEU VAL ILE TRP ILE ASN SEQRES 2 A 378 GLY ASP LYS GLY TYR ASN GLY LEU ALA GLU VAL GLY LYS SEQRES 3 A 378 LYS PHE GLU LYS ASP THR GLY ILE LYS VAL THR VAL GLU SEQRES 4 A 378 HIS PRO ASP LYS LEU GLU GLU LYS PHE PRO GLN VAL ALA SEQRES 5 A 378 ALA THR GLY ASP GLY PRO ASP ILE ILE PHE TRP ALA HIS SEQRES 6 A 378 ASP ARG PHE GLY GLY TYR ALA GLN SER GLY LEU LEU ALA SEQRES 7 A 378 GLU ILE THR PRO ASP LYS ALA PHE GLN ASP LYS LEU TYR SEQRES 8 A 378 PRO PHE THR TRP ASP ALA VAL ARG TYR ASN GLY LYS LEU SEQRES 9 A 378 ILE ALA TYR PRO ILE ALA VAL GLU ALA LEU SER LEU ILE SEQRES 10 A 378 TYR ASN LYS ASP LEU LEU PRO ASN PRO PRO LYS THR TRP SEQRES 11 A 378 GLU GLU ILE PRO ALA LEU ASP LYS GLU LEU LYS ALA LYS SEQRES 12 A 378 GLY LYS SER ALA LEU MET PHE ASN LEU GLN GLU PRO TYR SEQRES 13 A 378 PHE THR TRP PRO LEU ILE ALA ALA ASP GLY GLY TYR ALA SEQRES 14 A 378 PHE LYS TYR GLU ASN GLY LYS TYR ASP ILE LYS ASP VAL SEQRES 15 A 378 GLY VAL ASP ASN ALA GLY ALA LYS ALA GLY LEU THR PHE SEQRES 16 A 378 LEU VAL ASP LEU ILE LYS ASN LYS HIS MET ASN ALA ASP SEQRES 17 A 378 THR ASP TYR SER ILE ALA GLU ALA ALA PHE ASN LYS GLY SEQRES 18 A 378 GLU THR ALA MET THR ILE ASN GLY PRO TRP ALA TRP SER SEQRES 19 A 378 ASN ILE ASP THR SER LYS VAL ASN TYR GLY VAL THR VAL SEQRES 20 A 378 LEU PRO THR PHE LYS GLY GLN PRO SER LYS PRO PHE VAL SEQRES 21 A 378 GLY VAL LEU SER ALA GLY ILE ASN ALA ALA SER PRO ASN SEQRES 22 A 378 LYS GLU LEU ALA LYS GLU PHE LEU GLU ASN TYR LEU LEU SEQRES 23 A 378 THR ASP GLU GLY LEU GLU ALA VAL ASN LYS ASP LYS PRO SEQRES 24 A 378 LEU GLY ALA VAL ALA LEU LYS SER TYR GLU GLU GLU LEU SEQRES 25 A 378 ALA LYS ASP PRO ARG ILE ALA ALA THR MET GLU ASN ALA SEQRES 26 A 378 GLN LYS GLY GLU ILE MET PRO ASN ILE PRO GLN MET SER SEQRES 27 A 378 ALA PHE TRP TYR ALA VAL ARG THR ALA VAL ILE ASN ALA SEQRES 28 A 378 ALA SER GLY ARG GLN THR VAL ASP GLU ALA LEU LYS ASP SEQRES 29 A 378 ALA GLN THR ASN ALA ALA ALA ALA ALA GLY CCS LYS DAL SEQRES 30 A 378 DAL SEQRES 1 B 7 GHP HTY MP4 GHP GHP OMX MDF SEQRES 1 C 7 GHP HTY MP4 GHP GHP OMX MDF MODRES 3RUM CCS A 375 CYS CARBOXYMETHYLATED CYSTEINE HET CCS A 375 6 HET DAL A 377 5 HET DAL A 378 6 HET GHP B 1 11 HET HTY B 2 13 HET MP4 B 3 13 HET GHP B 4 11 HET GHP B 5 11 HET OMX B 6 13 HET MDF B 7 14 HET GHP C 1 11 HET HTY C 2 13 HET MP4 C 3 13 HET GHP C 4 11 HET GHP C 5 11 HET OMX C 6 13 HET MDF C 7 14 HET BGC D 1 11 HET MAN D 2 11 HET BXY D 3 9 HET RAM D 4 10 HET BGC E 1 11 HET MAN E 2 11 HET BXY E 3 9 HET RAM E 4 10 HET GLC F 1 12 HET GLC F 2 11 HET IPA A 402 4 HET IPA A 403 4 HET IPA A 404 4 HET SO4 A 405 5 HET SO4 A 406 5 HET SO4 A 407 5 HET RST B 12 9 HET MAN B 13 11 HET RST C 12 9 HET MAN C 13 11 HET SO4 C 107 5 HETNAM CCS CARBOXYMETHYLATED CYSTEINE HETNAM DAL D-ALANINE HETNAM GHP (2R)-AMINO(4-HYDROXYPHENYL)ETHANOIC ACID HETNAM HTY (BETAR)-BETA-HYDROXY-D-TYROSINE HETNAM MP4 (2S)-AMINO(3,5-DIHYDROXY-4-METHYLPHENYL)ETHANOIC ACID HETNAM OMX (BETAR)-BETA-HYDROXY-L-TYROSINE HETNAM MDF META, META'-DI-HYDROXY-PHENYLALANINE HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM BXY ALPHA-D-ARABINOFURANOSE HETNAM RAM ALPHA-L-RHAMNOPYRANOSE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM IPA ISOPROPYL ALCOHOL HETNAM SO4 SULFATE ION HETNAM RST 3-AMINO-2,3,6-TRIDEOXY-ALPHA-L-RIBO-HEXOPYRANOSE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN BXY ALPHA-D-ARABINOSE; D-ARABINOSE; ARABINOSE HETSYN RAM ALPHA-L-RHAMNOSE; 6-DEOXY-ALPHA-L-MANNOPYRANOSE; L- HETSYN 2 RAM RHAMNOSE; RHAMNOSE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN IPA 2-PROPANOL HETSYN RST RISTOSAMINE; 3-AMINO-2,3,6-TRIDEOXY-ALPHA-L-RIBO- HETSYN 2 RST HEXOSE; 3-AMINO-2,3,6-TRIDEOXY-L-RIBO-HEXOSE; 3-AMINO- HETSYN 3 RST 2,3,6-TRIDEOXY-RIBO-HEXOSE FORMUL 1 CCS C5 H9 N O4 S FORMUL 1 DAL 2(C3 H7 N O2) FORMUL 2 GHP 6(C8 H9 N O3) FORMUL 2 HTY 2(C9 H11 N O4) FORMUL 2 MP4 2(C9 H11 N O4) FORMUL 2 OMX 2(C9 H11 N O4) FORMUL 2 MDF 2(C9 H11 N O4) FORMUL 4 BGC 2(C6 H12 O6) FORMUL 4 MAN 4(C6 H12 O6) FORMUL 4 BXY 2(C5 H10 O5) FORMUL 4 RAM 2(C6 H12 O5) FORMUL 6 GLC 2(C6 H12 O6) FORMUL 7 IPA 3(C3 H8 O) FORMUL 10 SO4 4(O4 S 2-) FORMUL 13 RST 2(C6 H13 N O3) FORMUL 18 HOH *383(H2 O) HELIX 1 1 GLY A 17 GLY A 33 1 17 HELIX 2 2 LYS A 43 ALA A 53 1 11 HELIX 3 3 ARG A 67 SER A 74 1 8 HELIX 4 4 ASP A 83 ASP A 88 1 6 HELIX 5 5 TYR A 91 VAL A 98 1 8 HELIX 6 6 THR A 129 GLU A 131 5 3 HELIX 7 7 GLU A 132 ALA A 142 1 11 HELIX 8 8 GLU A 154 ASP A 165 1 12 HELIX 9 9 ASN A 186 ASN A 202 1 17 HELIX 10 10 ASP A 210 LYS A 220 1 11 HELIX 11 11 GLY A 229 TRP A 231 5 3 HELIX 12 12 ALA A 232 LYS A 240 1 9 HELIX 13 13 ASN A 273 TYR A 284 1 12 HELIX 14 14 THR A 287 LYS A 298 1 12 HELIX 15 15 LEU A 305 ALA A 313 1 9 HELIX 16 16 ASP A 315 LYS A 327 1 13 HELIX 17 17 GLN A 336 SER A 353 1 18 HELIX 18 18 THR A 357 ALA A 371 1 15 SHEET 1 A 6 LYS A 35 GLU A 39 0 SHEET 2 A 6 LYS A 7 TRP A 11 1 N ILE A 10 O GLU A 39 SHEET 3 A 6 ILE A 60 ALA A 64 1 O PHE A 62 N TRP A 11 SHEET 4 A 6 PHE A 259 ILE A 267 -1 O GLY A 266 N ILE A 61 SHEET 5 A 6 TYR A 107 GLU A 112 -1 N GLU A 112 O GLY A 261 SHEET 6 A 6 ALA A 302 VAL A 303 -1 O ALA A 302 N VAL A 111 SHEET 1 B 5 LYS A 35 GLU A 39 0 SHEET 2 B 5 LYS A 7 TRP A 11 1 N ILE A 10 O GLU A 39 SHEET 3 B 5 ILE A 60 ALA A 64 1 O PHE A 62 N TRP A 11 SHEET 4 B 5 PHE A 259 ILE A 267 -1 O GLY A 266 N ILE A 61 SHEET 5 B 5 GLU A 329 ILE A 330 1 O GLU A 329 N VAL A 260 SHEET 1 C 2 ARG A 99 TYR A 100 0 SHEET 2 C 2 LYS A 103 LEU A 104 -1 O LYS A 103 N TYR A 100 SHEET 1 D 4 SER A 146 LEU A 148 0 SHEET 2 D 4 THR A 223 ASN A 228 1 O ALA A 224 N SER A 146 SHEET 3 D 4 SER A 115 ASN A 119 -1 N ASN A 119 O ALA A 224 SHEET 4 D 4 TYR A 243 THR A 246 -1 O THR A 246 N LEU A 116 SHEET 1 E 2 TYR A 168 GLU A 173 0 SHEET 2 E 2 LYS A 176 GLY A 183 -1 O ASP A 178 N LYS A 171 SHEET 1 F 2 THR A 250 PHE A 251 0 SHEET 2 F 2 GLN A 254 PRO A 255 -1 O GLN A 254 N PHE A 251 LINK C GLY A 374 N CCS A 375 1555 1555 1.33 LINK C CCS A 375 N LYS A 376 1555 1555 1.33 LINK C LYS A 376 N DAL A 377 1555 1555 1.33 LINK C DAL A 377 N DAL A 378 1555 1555 1.33 LINK C GHP B 1 N HTY B 2 1555 1555 1.33 LINK C3 GHP B 1 O10 MP4 B 3 1555 1555 1.36 LINK C HTY B 2 N MP4 B 3 1555 1555 1.33 LINK OH HTY B 2 C3 GHP B 4 1555 1555 1.39 LINK C MP4 B 3 N GHP B 4 1555 1555 1.33 LINK C GHP B 4 N GHP B 5 1555 1555 1.33 LINK C5 GHP B 4 OH OMX B 6 1555 1555 1.39 LINK O4 GHP B 4 C1 BGC D 1 1555 1555 1.39 LINK C GHP B 5 N OMX B 6 1555 1555 1.34 LINK C3 GHP B 5 CD2 MDF B 7 1555 1555 1.40 LINK C OMX B 6 N MDF B 7 1555 1555 1.33 LINK OC OMX B 6 C1 RST B 12 1555 1555 1.39 LINK OH2 MDF B 7 C1 MAN B 13 1555 1555 1.40 LINK C GHP C 1 N HTY C 2 1555 1555 1.33 LINK C3 GHP C 1 O10 MP4 C 3 1555 1555 1.37 LINK C HTY C 2 N MP4 C 3 1555 1555 1.34 LINK OH HTY C 2 C3 GHP C 4 1555 1555 1.39 LINK C MP4 C 3 N GHP C 4 1555 1555 1.34 LINK C GHP C 4 N GHP C 5 1555 1555 1.33 LINK C5 GHP C 4 OH OMX C 6 1555 1555 1.39 LINK O4 GHP C 4 C1 BGC E 1 1555 1555 1.38 LINK C GHP C 5 N OMX C 6 1555 1555 1.34 LINK C3 GHP C 5 CD2 MDF C 7 1555 1555 1.41 LINK C OMX C 6 N MDF C 7 1555 1555 1.33 LINK OC OMX C 6 C1 RST C 12 1555 1555 1.38 LINK OH2 MDF C 7 C1 MAN C 13 1555 1555 1.43 LINK O2 BGC D 1 C1 MAN D 2 1555 1555 1.38 LINK O6 BGC D 1 C1 RAM D 4 1555 1555 1.38 LINK O2 MAN D 2 C1 BXY D 3 1555 1555 1.39 LINK O2 BGC E 1 C1 MAN E 2 1555 1555 1.38 LINK O6 BGC E 1 C1 RAM E 4 1555 1555 1.39 LINK O2 MAN E 2 C1 BXY E 3 1555 1555 1.38 LINK O4 GLC F 1 C1 GLC F 2 1555 1555 1.41 CISPEP 1 GHP B 5 OMX B 6 0 5.43 CISPEP 2 GHP C 5 OMX C 6 0 1.93 CRYST1 57.833 75.005 90.778 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017291 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013332 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011016 0.00000