HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 06-MAY-11 3RVH TITLE CRYSTAL STRUCTURE OF JMJD2A COMPLEXED WITH INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSINE-SPECIFIC DEMETHYLASE 4A; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN; COMPND 5 SYNONYM: JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 3A, COMPND 6 JUMONJI DOMAIN-CONTAINING PROTEIN 2A; COMPND 7 EC: 1.14.11.-; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: JHDM3A, JMJD2, JMJD2A, KDM4A, KIAA0677; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS OXIDOREDUCTASE, JMJC DOMAIN, CHROMATIN REGULATOR, DIOXYGENASE, KEYWDS 2 TRANSCRIPTION, IRON, 2-OXOGLUTARATE, ALPHA-KETOGLUTARATE, KEYWDS 3 DEMETHYLATION, NUCLEUS, OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR KEYWDS 4 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR O.N.F.KING,D.J.MALONEY,A.TUMBER,G.RAI,A.JADHAV,I.J.CLIFTON, AUTHOR 2 T.D.HEIGHTMAN,A.SIMEONOV,M.A.MCDONOUGH,C.J.SCHOFIELD REVDAT 3 13-SEP-23 3RVH 1 REMARK SEQADV LINK REVDAT 2 08-NOV-17 3RVH 1 REMARK REVDAT 1 09-MAY-12 3RVH 0 JRNL AUTH O.N.F.KING,D.J.MALONEY,A.TUMBER,G.RAI,A.JADHAV,I.J.CLIFTON, JRNL AUTH 2 T.D.HEIGHTMAN,A.SIMEONOV,M.A.MCDONOUGH,C.J.SCHOFIELD JRNL TITL CRYSTAL STRUCTURE OF JMJD2A COMPLEXED WITH INHIBITOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.1_743 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 41635 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 2117 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.3943 - 5.5475 0.99 2814 149 0.1813 0.2042 REMARK 3 2 5.5475 - 4.4044 1.00 2692 148 0.1339 0.1565 REMARK 3 3 4.4044 - 3.8480 1.00 2676 150 0.1426 0.2093 REMARK 3 4 3.8480 - 3.4963 1.00 2662 134 0.1704 0.1964 REMARK 3 5 3.4963 - 3.2458 1.00 2660 131 0.1802 0.2466 REMARK 3 6 3.2458 - 3.0545 1.00 2611 153 0.1706 0.2140 REMARK 3 7 3.0545 - 2.9015 1.00 2633 154 0.1860 0.2492 REMARK 3 8 2.9015 - 2.7752 1.00 2627 124 0.2005 0.2628 REMARK 3 9 2.7752 - 2.6684 1.00 2588 153 0.1961 0.2547 REMARK 3 10 2.6684 - 2.5763 1.00 2590 129 0.2013 0.2781 REMARK 3 11 2.5763 - 2.4958 1.00 2596 162 0.2159 0.2757 REMARK 3 12 2.4958 - 2.4245 1.00 2596 131 0.2106 0.3179 REMARK 3 13 2.4245 - 2.3606 1.00 2609 135 0.2192 0.2797 REMARK 3 14 2.3606 - 2.3030 1.00 2589 138 0.2211 0.2695 REMARK 3 15 2.3030 - 2.2510 0.99 2575 126 0.2389 0.3314 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 37.79 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.630 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.05060 REMARK 3 B22 (A**2) : 0.78290 REMARK 3 B33 (A**2) : 1.26770 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5955 REMARK 3 ANGLE : 1.068 8115 REMARK 3 CHIRALITY : 0.073 841 REMARK 3 PLANARITY : 0.005 1043 REMARK 3 DIHEDRAL : 13.143 2165 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 3:11) REMARK 3 ORIGIN FOR THE GROUP (A): -49.7519 -35.3671 -20.7297 REMARK 3 T TENSOR REMARK 3 T11: 0.7906 T22: 0.6965 REMARK 3 T33: 0.8175 T12: -0.2334 REMARK 3 T13: -0.0741 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 0.0451 L22: 0.0077 REMARK 3 L33: 0.0016 L12: -0.0182 REMARK 3 L13: 0.0077 L23: -0.0026 REMARK 3 S TENSOR REMARK 3 S11: -0.2769 S12: -0.5041 S13: 0.3817 REMARK 3 S21: 0.7902 S22: -0.1655 S23: 0.9376 REMARK 3 S31: -0.0775 S32: -0.4982 S33: 0.0539 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 12:70) REMARK 3 ORIGIN FOR THE GROUP (A): -35.7068 -22.6985 -34.3159 REMARK 3 T TENSOR REMARK 3 T11: 0.4243 T22: 0.4863 REMARK 3 T33: 0.1735 T12: 0.1635 REMARK 3 T13: -0.0914 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 1.3743 L22: 1.5882 REMARK 3 L33: 1.4060 L12: -0.4539 REMARK 3 L13: -0.0105 L23: -0.2440 REMARK 3 S TENSOR REMARK 3 S11: 0.3469 S12: 1.0895 S13: -0.0612 REMARK 3 S21: -0.9111 S22: -0.5340 S23: 0.3117 REMARK 3 S31: 0.2074 S32: 0.0756 S33: 0.0157 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 71:123) REMARK 3 ORIGIN FOR THE GROUP (A): -13.1097 -27.7652 -24.2572 REMARK 3 T TENSOR REMARK 3 T11: 0.2371 T22: 0.5623 REMARK 3 T33: 0.2276 T12: 0.1076 REMARK 3 T13: 0.1951 T23: 0.1212 REMARK 3 L TENSOR REMARK 3 L11: 1.5358 L22: 1.2560 REMARK 3 L33: 1.3580 L12: 0.3872 REMARK 3 L13: -0.0557 L23: -0.8039 REMARK 3 S TENSOR REMARK 3 S11: 0.3902 S12: 0.6508 S13: -0.0845 REMARK 3 S21: -0.2778 S22: -0.3681 S23: -0.4593 REMARK 3 S31: 0.3434 S32: 0.6064 S33: 0.1579 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 124:213) REMARK 3 ORIGIN FOR THE GROUP (A): -28.4979 -17.8213 -26.3339 REMARK 3 T TENSOR REMARK 3 T11: 0.2398 T22: 0.3250 REMARK 3 T33: 0.1917 T12: 0.0458 REMARK 3 T13: 0.0180 T23: 0.0526 REMARK 3 L TENSOR REMARK 3 L11: 1.4907 L22: 1.5491 REMARK 3 L33: 0.5409 L12: -0.6791 REMARK 3 L13: 0.3095 L23: 0.0534 REMARK 3 S TENSOR REMARK 3 S11: 0.1978 S12: 0.3519 S13: 0.2033 REMARK 3 S21: -0.3359 S22: -0.2816 S23: -0.0105 REMARK 3 S31: -0.0641 S32: 0.2030 S33: 0.0592 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 214:240) REMARK 3 ORIGIN FOR THE GROUP (A): -29.6029 -27.5712 -5.6761 REMARK 3 T TENSOR REMARK 3 T11: 0.4020 T22: 0.3283 REMARK 3 T33: 0.2769 T12: -0.0235 REMARK 3 T13: 0.0714 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 3.7131 L22: 3.5706 REMARK 3 L33: 3.3888 L12: 0.1930 REMARK 3 L13: 0.6788 L23: -0.6665 REMARK 3 S TENSOR REMARK 3 S11: -0.1138 S12: -0.5669 S13: -0.1877 REMARK 3 S21: 0.5100 S22: -0.2406 S23: 0.0058 REMARK 3 S31: -0.0987 S32: 0.2369 S33: 0.3574 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 241:254) REMARK 3 ORIGIN FOR THE GROUP (A): -24.9301 -35.0402 -12.3552 REMARK 3 T TENSOR REMARK 3 T11: 0.2146 T22: 0.2205 REMARK 3 T33: 0.2587 T12: -0.0241 REMARK 3 T13: 0.0502 T23: 0.0239 REMARK 3 L TENSOR REMARK 3 L11: 2.6869 L22: 4.0383 REMARK 3 L33: 2.3230 L12: 1.7758 REMARK 3 L13: -0.7237 L23: 0.1120 REMARK 3 S TENSOR REMARK 3 S11: 0.1058 S12: -0.0457 S13: -0.2053 REMARK 3 S21: 0.0071 S22: -0.2195 S23: -0.5608 REMARK 3 S31: -0.0762 S32: 0.1106 S33: 0.0142 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 255:307) REMARK 3 ORIGIN FOR THE GROUP (A): -33.5795 -23.5018 -22.0184 REMARK 3 T TENSOR REMARK 3 T11: 0.1996 T22: 0.2448 REMARK 3 T33: 0.2012 T12: 0.0032 REMARK 3 T13: -0.0325 T23: -0.0394 REMARK 3 L TENSOR REMARK 3 L11: 2.3412 L22: 2.0121 REMARK 3 L33: 1.0558 L12: -1.1032 REMARK 3 L13: 0.4342 L23: -0.9789 REMARK 3 S TENSOR REMARK 3 S11: 0.1940 S12: 0.1474 S13: -0.0937 REMARK 3 S21: -0.2518 S22: -0.1869 S23: 0.2421 REMARK 3 S31: 0.0382 S32: 0.1068 S33: -0.0002 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 308:353) REMARK 3 ORIGIN FOR THE GROUP (A): -47.2740 -13.6944 -13.1023 REMARK 3 T TENSOR REMARK 3 T11: 0.2777 T22: 0.3085 REMARK 3 T33: 0.4143 T12: 0.0349 REMARK 3 T13: -0.0282 T23: -0.0647 REMARK 3 L TENSOR REMARK 3 L11: 1.6724 L22: 2.6670 REMARK 3 L33: 2.2250 L12: -1.0742 REMARK 3 L13: -1.0469 L23: -0.1367 REMARK 3 S TENSOR REMARK 3 S11: 0.0749 S12: -0.0698 S13: -0.2085 REMARK 3 S21: 0.2253 S22: -0.0005 S23: 0.2406 REMARK 3 S31: -0.2309 S32: -0.2909 S33: -0.0446 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 5:9) REMARK 3 ORIGIN FOR THE GROUP (A): -18.9667 -43.0180 0.9421 REMARK 3 T TENSOR REMARK 3 T11: 0.5366 T22: 1.0890 REMARK 3 T33: 1.4866 T12: -0.2985 REMARK 3 T13: 0.0558 T23: -0.2555 REMARK 3 L TENSOR REMARK 3 L11: 2.4819 L22: 1.0563 REMARK 3 L33: 0.7844 L12: -0.4242 REMARK 3 L13: 0.9175 L23: -0.8183 REMARK 3 S TENSOR REMARK 3 S11: 0.1207 S12: -0.3517 S13: -0.1467 REMARK 3 S21: 0.3077 S22: -0.3231 S23: -0.8114 REMARK 3 S31: -0.2096 S32: 0.5850 S33: -0.0823 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN B AND RESID 10:64) REMARK 3 ORIGIN FOR THE GROUP (A): -31.2061 -55.1320 -9.8124 REMARK 3 T TENSOR REMARK 3 T11: 0.4856 T22: 0.2261 REMARK 3 T33: 0.2298 T12: -0.0099 REMARK 3 T13: 0.0492 T23: 0.0015 REMARK 3 L TENSOR REMARK 3 L11: 3.0702 L22: 2.2665 REMARK 3 L33: 1.7004 L12: -0.2343 REMARK 3 L13: -0.4574 L23: -0.2550 REMARK 3 S TENSOR REMARK 3 S11: 0.0985 S12: 0.4436 S13: 0.0147 REMARK 3 S21: -0.7221 S22: 0.0604 S23: -0.5788 REMARK 3 S31: 0.3329 S32: 0.1194 S33: -0.1340 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN B AND RESID 65:103) REMARK 3 ORIGIN FOR THE GROUP (A): -56.3436 -56.0366 3.0524 REMARK 3 T TENSOR REMARK 3 T11: 0.3042 T22: 0.4260 REMARK 3 T33: 0.2796 T12: -0.1984 REMARK 3 T13: -0.1347 T23: 0.0425 REMARK 3 L TENSOR REMARK 3 L11: 0.9412 L22: 1.1985 REMARK 3 L33: 1.1556 L12: -0.2029 REMARK 3 L13: 0.1600 L23: 0.9051 REMARK 3 S TENSOR REMARK 3 S11: -0.1087 S12: 0.0058 S13: 0.0018 REMARK 3 S21: -0.1323 S22: 0.1774 S23: 0.4881 REMARK 3 S31: 0.2267 S32: -0.5124 S33: 0.0535 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN B AND RESID 104:128) REMARK 3 ORIGIN FOR THE GROUP (A): -54.3548 -41.4380 -1.6102 REMARK 3 T TENSOR REMARK 3 T11: 0.2983 T22: 0.3371 REMARK 3 T33: 0.3238 T12: -0.0203 REMARK 3 T13: -0.1253 T23: 0.1492 REMARK 3 L TENSOR REMARK 3 L11: 2.6616 L22: 0.6565 REMARK 3 L33: 2.5973 L12: -0.6772 REMARK 3 L13: 1.0182 L23: 0.7694 REMARK 3 S TENSOR REMARK 3 S11: -0.0029 S12: 0.1730 S13: 0.4421 REMARK 3 S21: -0.4049 S22: 0.1464 S23: 0.3523 REMARK 3 S31: -0.1477 S32: -0.3484 S33: 0.0858 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN B AND RESID 129:211) REMARK 3 ORIGIN FOR THE GROUP (A): -39.9580 -61.0017 -0.8340 REMARK 3 T TENSOR REMARK 3 T11: 0.4271 T22: 0.1534 REMARK 3 T33: 0.2531 T12: -0.0555 REMARK 3 T13: -0.0658 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 1.6664 L22: 0.8838 REMARK 3 L33: 1.3307 L12: -0.0767 REMARK 3 L13: 0.0036 L23: 0.1173 REMARK 3 S TENSOR REMARK 3 S11: 0.0742 S12: -0.0464 S13: -0.2774 REMARK 3 S21: -0.2951 S22: 0.1226 S23: -0.1473 REMARK 3 S31: 0.5822 S32: -0.1476 S33: -0.1319 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN B AND RESID 212:241) REMARK 3 ORIGIN FOR THE GROUP (A): -38.1357 -48.0044 17.9859 REMARK 3 T TENSOR REMARK 3 T11: 0.3379 T22: 0.4355 REMARK 3 T33: 0.3817 T12: -0.0248 REMARK 3 T13: -0.0807 T23: -0.0482 REMARK 3 L TENSOR REMARK 3 L11: 3.3723 L22: 2.5545 REMARK 3 L33: 2.7965 L12: 0.6838 REMARK 3 L13: -1.1719 L23: 0.1065 REMARK 3 S TENSOR REMARK 3 S11: 0.0793 S12: -0.9890 S13: 0.2045 REMARK 3 S21: 0.4976 S22: -0.1828 S23: -0.1040 REMARK 3 S31: -0.2572 S32: 0.0732 S33: 0.2057 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN B AND RESID 242:294) REMARK 3 ORIGIN FOR THE GROUP (A): -38.9727 -48.7608 2.2770 REMARK 3 T TENSOR REMARK 3 T11: 0.2221 T22: 0.1455 REMARK 3 T33: 0.2523 T12: -0.0541 REMARK 3 T13: -0.0251 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 0.9977 L22: 1.4498 REMARK 3 L33: 1.3909 L12: -0.4756 REMARK 3 L13: -0.3407 L23: -0.1595 REMARK 3 S TENSOR REMARK 3 S11: 0.0138 S12: -0.0184 S13: 0.0837 REMARK 3 S21: -0.0820 S22: 0.1211 S23: -0.2254 REMARK 3 S31: 0.1144 S32: -0.0300 S33: -0.0852 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN B AND RESID 295:354) REMARK 3 ORIGIN FOR THE GROUP (A): -22.8558 -61.5612 12.9960 REMARK 3 T TENSOR REMARK 3 T11: 0.2867 T22: 0.2859 REMARK 3 T33: 0.4133 T12: 0.0464 REMARK 3 T13: -0.0258 T23: 0.0138 REMARK 3 L TENSOR REMARK 3 L11: 1.8665 L22: 2.7822 REMARK 3 L33: 1.8595 L12: -0.9965 REMARK 3 L13: 1.0712 L23: -0.5839 REMARK 3 S TENSOR REMARK 3 S11: -0.0649 S12: -0.1697 S13: 0.0247 REMARK 3 S21: 0.0506 S22: -0.0338 S23: -0.0907 REMARK 3 S31: 0.1259 S32: -0.0266 S33: -0.0013 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3RVH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1000065426. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97930 REMARK 200 MONOCHROMATOR : SI (111) DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41678 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.62100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 2OX0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CITRATE, 4MM NICL2, 20% PEG 3350, REMARK 280 2:1 PROTEIN:WELL, PH 5.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 50.41000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 74.67000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 50.41000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 74.67000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LEU A 354 REMARK 465 LYS A 355 REMARK 465 GLU A 356 REMARK 465 SER A 357 REMARK 465 GLU A 358 REMARK 465 LEU A 359 REMARK 465 MET B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 SER B -14 REMARK 465 SER B -13 REMARK 465 GLY B -12 REMARK 465 VAL B -11 REMARK 465 ASP B -10 REMARK 465 LEU B -9 REMARK 465 GLY B -8 REMARK 465 THR B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 SER B 3 REMARK 465 GLU B 4 REMARK 465 LYS B 355 REMARK 465 GLU B 356 REMARK 465 SER B 357 REMARK 465 GLU B 358 REMARK 465 LEU B 359 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 4 CG CD OE1 OE2 REMARK 470 THR A 7 OG1 CG2 REMARK 470 GLU A 22 CG CD OE1 OE2 REMARK 470 ARG A 29 NE CZ NH1 NH2 REMARK 470 LYS A 51 CG CD CE NZ REMARK 470 LYS A 54 CG CD CE NZ REMARK 470 LYS A 90 CE NZ REMARK 470 ARG A 95 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 99 CG CD CE NZ REMARK 470 SER A 112 OG REMARK 470 GLU A 113 CG CD OE1 OE2 REMARK 470 GLU A 115 CG CD OE1 OE2 REMARK 470 LYS A 143 CG CD CE NZ REMARK 470 LYS A 162 CG CD CE NZ REMARK 470 LYS A 224 CG CD CE NZ REMARK 470 GLU A 235 CG CD OE1 OE2 REMARK 470 ARG A 309 NE CZ NH1 NH2 REMARK 470 LYS A 310 CE NZ REMARK 470 ASP A 311 CG OD1 OD2 REMARK 470 LYS A 314 CE NZ REMARK 470 LYS A 330 CE NZ REMARK 470 LYS A 336 CD CE NZ REMARK 470 GLU B 6 CG CD OE1 OE2 REMARK 470 THR B 7 OG1 CG2 REMARK 470 ARG B 13 NE CZ NH1 NH2 REMARK 470 ARG B 29 CD NE CZ NH1 NH2 REMARK 470 LYS B 51 CD CE NZ REMARK 470 LYS B 54 CD CE NZ REMARK 470 LYS B 90 CG CD CE NZ REMARK 470 LYS B 99 CD CE NZ REMARK 470 ARG B 110 CG CD NE CZ NH1 NH2 REMARK 470 SER B 112 OG REMARK 470 ARG B 154 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 162 CG CD CE NZ REMARK 470 GLU B 163 CG CD OE1 OE2 REMARK 470 LYS B 224 CD CE NZ REMARK 470 LYS B 310 CG CD CE NZ REMARK 470 ASP B 311 CG OD1 OD2 REMARK 470 LYS B 323 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG B 328 OG1 THR B 339 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 59 40.18 -101.47 REMARK 500 ALA A 69 65.04 -150.16 REMARK 500 SER A 112 -81.22 -102.24 REMARK 500 ARG A 152 73.15 -165.85 REMARK 500 MET A 192 19.05 51.83 REMARK 500 ALA A 236 52.24 -149.49 REMARK 500 ALA B 91 151.77 -49.99 REMARK 500 ASN B 128 68.39 39.60 REMARK 500 ASN B 128 70.32 37.14 REMARK 500 LYS B 182 -0.60 81.09 REMARK 500 MET B 192 18.35 58.05 REMARK 500 ALA B 236 56.50 -102.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 501 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 188 NE2 REMARK 620 2 GLU A 190 OE2 95.8 REMARK 620 3 HOH A 484 O 95.2 102.1 REMARK 620 4 HQ2 A 503 OAR 96.5 76.7 168.4 REMARK 620 5 HQ2 A 503 NAA 86.9 154.8 102.6 78.1 REMARK 620 6 HOH A 529 O 167.3 96.7 84.4 84.3 80.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 234 SG REMARK 620 2 HIS A 240 NE2 110.0 REMARK 620 3 CYS A 306 SG 114.0 120.7 REMARK 620 4 CYS A 308 SG 107.5 87.9 113.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 501 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 188 NE2 REMARK 620 2 GLU B 190 OE2 96.7 REMARK 620 3 HOH B 467 O 171.7 88.9 REMARK 620 4 HQ2 B 503 OAR 95.8 81.6 79.0 REMARK 620 5 HQ2 B 503 NAA 86.8 156.8 85.7 75.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 234 SG REMARK 620 2 CYS B 306 SG 121.8 REMARK 620 3 CYS B 308 SG 107.4 113.7 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HQ2 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HQ2 B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 504 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2OQ7 RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF JMJD2A COMPLEXED WITH NI AND N- REMARK 900 OXALYLGLYCINE REMARK 900 RELATED ID: 2OX0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJD2A COMPLEXED WITH HISTONE H3 PEPTIDE REMARK 900 DIMETHYLATED AT LYS9 REMARK 900 RELATED ID: 2VD7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJD2A COMPLEXED WITH INHIBITOR PYRIDINE-2,4- REMARK 900 DICARBOXYLIC ACID REMARK 900 RELATED ID: 2WWJ RELATED DB: PDB REMARK 900 STRUCTURE OF JMJD2A COMPLEXED WITH INHIBITOR 10A REMARK 900 RELATED ID: 3NJY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJD2A COMPLEXED WITH 5-CARBOXY-8- REMARK 900 HYDROXYQUINOLINE REMARK 900 RELATED ID: 3PDQ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJD2A COMPLEXED WITH BIPYRIDYL INHIBITOR DBREF 3RVH A 1 359 UNP O75164 KDM4A_HUMAN 1 359 DBREF 3RVH B 1 359 UNP O75164 KDM4A_HUMAN 1 359 SEQADV 3RVH MET A -21 UNP O75164 EXPRESSION TAG SEQADV 3RVH HIS A -20 UNP O75164 EXPRESSION TAG SEQADV 3RVH HIS A -19 UNP O75164 EXPRESSION TAG SEQADV 3RVH HIS A -18 UNP O75164 EXPRESSION TAG SEQADV 3RVH HIS A -17 UNP O75164 EXPRESSION TAG SEQADV 3RVH HIS A -16 UNP O75164 EXPRESSION TAG SEQADV 3RVH HIS A -15 UNP O75164 EXPRESSION TAG SEQADV 3RVH SER A -14 UNP O75164 EXPRESSION TAG SEQADV 3RVH SER A -13 UNP O75164 EXPRESSION TAG SEQADV 3RVH GLY A -12 UNP O75164 EXPRESSION TAG SEQADV 3RVH VAL A -11 UNP O75164 EXPRESSION TAG SEQADV 3RVH ASP A -10 UNP O75164 EXPRESSION TAG SEQADV 3RVH LEU A -9 UNP O75164 EXPRESSION TAG SEQADV 3RVH GLY A -8 UNP O75164 EXPRESSION TAG SEQADV 3RVH THR A -7 UNP O75164 EXPRESSION TAG SEQADV 3RVH GLU A -6 UNP O75164 EXPRESSION TAG SEQADV 3RVH ASN A -5 UNP O75164 EXPRESSION TAG SEQADV 3RVH LEU A -4 UNP O75164 EXPRESSION TAG SEQADV 3RVH TYR A -3 UNP O75164 EXPRESSION TAG SEQADV 3RVH PHE A -2 UNP O75164 EXPRESSION TAG SEQADV 3RVH GLN A -1 UNP O75164 EXPRESSION TAG SEQADV 3RVH SER A 0 UNP O75164 EXPRESSION TAG SEQADV 3RVH MET B -21 UNP O75164 EXPRESSION TAG SEQADV 3RVH HIS B -20 UNP O75164 EXPRESSION TAG SEQADV 3RVH HIS B -19 UNP O75164 EXPRESSION TAG SEQADV 3RVH HIS B -18 UNP O75164 EXPRESSION TAG SEQADV 3RVH HIS B -17 UNP O75164 EXPRESSION TAG SEQADV 3RVH HIS B -16 UNP O75164 EXPRESSION TAG SEQADV 3RVH HIS B -15 UNP O75164 EXPRESSION TAG SEQADV 3RVH SER B -14 UNP O75164 EXPRESSION TAG SEQADV 3RVH SER B -13 UNP O75164 EXPRESSION TAG SEQADV 3RVH GLY B -12 UNP O75164 EXPRESSION TAG SEQADV 3RVH VAL B -11 UNP O75164 EXPRESSION TAG SEQADV 3RVH ASP B -10 UNP O75164 EXPRESSION TAG SEQADV 3RVH LEU B -9 UNP O75164 EXPRESSION TAG SEQADV 3RVH GLY B -8 UNP O75164 EXPRESSION TAG SEQADV 3RVH THR B -7 UNP O75164 EXPRESSION TAG SEQADV 3RVH GLU B -6 UNP O75164 EXPRESSION TAG SEQADV 3RVH ASN B -5 UNP O75164 EXPRESSION TAG SEQADV 3RVH LEU B -4 UNP O75164 EXPRESSION TAG SEQADV 3RVH TYR B -3 UNP O75164 EXPRESSION TAG SEQADV 3RVH PHE B -2 UNP O75164 EXPRESSION TAG SEQADV 3RVH GLN B -1 UNP O75164 EXPRESSION TAG SEQADV 3RVH SER B 0 UNP O75164 EXPRESSION TAG SEQRES 1 A 381 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 381 GLY THR GLU ASN LEU TYR PHE GLN SER MET ALA SER GLU SEQRES 3 A 381 SER GLU THR LEU ASN PRO SER ALA ARG ILE MET THR PHE SEQRES 4 A 381 TYR PRO THR MET GLU GLU PHE ARG ASN PHE SER ARG TYR SEQRES 5 A 381 ILE ALA TYR ILE GLU SER GLN GLY ALA HIS ARG ALA GLY SEQRES 6 A 381 LEU ALA LYS VAL VAL PRO PRO LYS GLU TRP LYS PRO ARG SEQRES 7 A 381 ALA SER TYR ASP ASP ILE ASP ASP LEU VAL ILE PRO ALA SEQRES 8 A 381 PRO ILE GLN GLN LEU VAL THR GLY GLN SER GLY LEU PHE SEQRES 9 A 381 THR GLN TYR ASN ILE GLN LYS LYS ALA MET THR VAL ARG SEQRES 10 A 381 GLU PHE ARG LYS ILE ALA ASN SER ASP LYS TYR CYS THR SEQRES 11 A 381 PRO ARG TYR SER GLU PHE GLU GLU LEU GLU ARG LYS TYR SEQRES 12 A 381 TRP LYS ASN LEU THR PHE ASN PRO PRO ILE TYR GLY ALA SEQRES 13 A 381 ASP VAL ASN GLY THR LEU TYR GLU LYS HIS VAL ASP GLU SEQRES 14 A 381 TRP ASN ILE GLY ARG LEU ARG THR ILE LEU ASP LEU VAL SEQRES 15 A 381 GLU LYS GLU SER GLY ILE THR ILE GLU GLY VAL ASN THR SEQRES 16 A 381 PRO TYR LEU TYR PHE GLY MET TRP LYS THR SER PHE ALA SEQRES 17 A 381 TRP HIS THR GLU ASP MET ASP LEU TYR SER ILE ASN TYR SEQRES 18 A 381 LEU HIS PHE GLY GLU PRO LYS SER TRP TYR SER VAL PRO SEQRES 19 A 381 PRO GLU HIS GLY LYS ARG LEU GLU ARG LEU ALA LYS GLY SEQRES 20 A 381 PHE PHE PRO GLY SER ALA GLN SER CYS GLU ALA PHE LEU SEQRES 21 A 381 ARG HIS LYS MET THR LEU ILE SER PRO LEU MET LEU LYS SEQRES 22 A 381 LYS TYR GLY ILE PRO PHE ASP LYS VAL THR GLN GLU ALA SEQRES 23 A 381 GLY GLU PHE MET ILE THR PHE PRO TYR GLY TYR HIS ALA SEQRES 24 A 381 GLY PHE ASN HIS GLY PHE ASN CYS ALA GLU SER THR ASN SEQRES 25 A 381 PHE ALA THR ARG ARG TRP ILE GLU TYR GLY LYS GLN ALA SEQRES 26 A 381 VAL LEU CYS SER CYS ARG LYS ASP MET VAL LYS ILE SER SEQRES 27 A 381 MET ASP VAL PHE VAL ARG LYS PHE GLN PRO GLU ARG TYR SEQRES 28 A 381 LYS LEU TRP LYS ALA GLY LYS ASP ASN THR VAL ILE ASP SEQRES 29 A 381 HIS THR LEU PRO THR PRO GLU ALA ALA GLU PHE LEU LYS SEQRES 30 A 381 GLU SER GLU LEU SEQRES 1 B 381 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 381 GLY THR GLU ASN LEU TYR PHE GLN SER MET ALA SER GLU SEQRES 3 B 381 SER GLU THR LEU ASN PRO SER ALA ARG ILE MET THR PHE SEQRES 4 B 381 TYR PRO THR MET GLU GLU PHE ARG ASN PHE SER ARG TYR SEQRES 5 B 381 ILE ALA TYR ILE GLU SER GLN GLY ALA HIS ARG ALA GLY SEQRES 6 B 381 LEU ALA LYS VAL VAL PRO PRO LYS GLU TRP LYS PRO ARG SEQRES 7 B 381 ALA SER TYR ASP ASP ILE ASP ASP LEU VAL ILE PRO ALA SEQRES 8 B 381 PRO ILE GLN GLN LEU VAL THR GLY GLN SER GLY LEU PHE SEQRES 9 B 381 THR GLN TYR ASN ILE GLN LYS LYS ALA MET THR VAL ARG SEQRES 10 B 381 GLU PHE ARG LYS ILE ALA ASN SER ASP LYS TYR CYS THR SEQRES 11 B 381 PRO ARG TYR SER GLU PHE GLU GLU LEU GLU ARG LYS TYR SEQRES 12 B 381 TRP LYS ASN LEU THR PHE ASN PRO PRO ILE TYR GLY ALA SEQRES 13 B 381 ASP VAL ASN GLY THR LEU TYR GLU LYS HIS VAL ASP GLU SEQRES 14 B 381 TRP ASN ILE GLY ARG LEU ARG THR ILE LEU ASP LEU VAL SEQRES 15 B 381 GLU LYS GLU SER GLY ILE THR ILE GLU GLY VAL ASN THR SEQRES 16 B 381 PRO TYR LEU TYR PHE GLY MET TRP LYS THR SER PHE ALA SEQRES 17 B 381 TRP HIS THR GLU ASP MET ASP LEU TYR SER ILE ASN TYR SEQRES 18 B 381 LEU HIS PHE GLY GLU PRO LYS SER TRP TYR SER VAL PRO SEQRES 19 B 381 PRO GLU HIS GLY LYS ARG LEU GLU ARG LEU ALA LYS GLY SEQRES 20 B 381 PHE PHE PRO GLY SER ALA GLN SER CYS GLU ALA PHE LEU SEQRES 21 B 381 ARG HIS LYS MET THR LEU ILE SER PRO LEU MET LEU LYS SEQRES 22 B 381 LYS TYR GLY ILE PRO PHE ASP LYS VAL THR GLN GLU ALA SEQRES 23 B 381 GLY GLU PHE MET ILE THR PHE PRO TYR GLY TYR HIS ALA SEQRES 24 B 381 GLY PHE ASN HIS GLY PHE ASN CYS ALA GLU SER THR ASN SEQRES 25 B 381 PHE ALA THR ARG ARG TRP ILE GLU TYR GLY LYS GLN ALA SEQRES 26 B 381 VAL LEU CYS SER CYS ARG LYS ASP MET VAL LYS ILE SER SEQRES 27 B 381 MET ASP VAL PHE VAL ARG LYS PHE GLN PRO GLU ARG TYR SEQRES 28 B 381 LYS LEU TRP LYS ALA GLY LYS ASP ASN THR VAL ILE ASP SEQRES 29 B 381 HIS THR LEU PRO THR PRO GLU ALA ALA GLU PHE LEU LYS SEQRES 30 B 381 GLU SER GLU LEU HET NI A 501 1 HET ZN A 502 1 HET HQ2 A 503 20 HET GOL A 504 6 HET NI B 501 1 HET ZN B 502 1 HET HQ2 B 503 20 HET GOL B 504 6 HETNAM NI NICKEL (II) ION HETNAM ZN ZINC ION HETNAM HQ2 8-HYDROXY-3-(PIPERAZIN-1-YL)QUINOLINE-5-CARBOXYLIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NI 2(NI 2+) FORMUL 4 ZN 2(ZN 2+) FORMUL 5 HQ2 2(C14 H15 N3 O3) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 11 HOH *356(H2 O) HELIX 1 1 THR A 20 ARG A 25 1 6 HELIX 2 2 ASN A 26 GLN A 37 1 12 HELIX 3 3 GLY A 38 ALA A 42 5 5 HELIX 4 4 VAL A 94 SER A 103 1 10 HELIX 5 5 GLU A 113 LEU A 125 1 13 HELIX 6 6 THR A 155 LEU A 157 5 3 HELIX 7 7 ASP A 158 GLY A 165 1 8 HELIX 8 8 GLU A 190 LEU A 194 5 5 HELIX 9 9 PRO A 212 GLU A 214 5 3 HELIX 10 10 HIS A 215 PHE A 227 1 13 HELIX 11 11 PHE A 227 CYS A 234 1 8 HELIX 12 12 ALA A 236 LYS A 241 5 6 HELIX 13 13 SER A 246 TYR A 253 1 8 HELIX 14 14 ARG A 295 ALA A 303 1 9 HELIX 15 15 MET A 317 GLN A 325 1 9 HELIX 16 16 ARG A 328 ALA A 334 1 7 HELIX 17 17 THR A 347 PHE A 353 5 7 HELIX 18 18 THR B 20 ASN B 26 1 7 HELIX 19 19 ASN B 26 GLN B 37 1 12 HELIX 20 20 GLY B 38 ALA B 42 5 5 HELIX 21 21 VAL B 94 SER B 103 1 10 HELIX 22 22 GLU B 113 LEU B 125 1 13 HELIX 23 23 THR B 155 LEU B 157 5 3 HELIX 24 24 ASP B 158 GLY B 165 1 8 HELIX 25 25 GLU B 190 LEU B 194 5 5 HELIX 26 26 PRO B 212 GLU B 214 5 3 HELIX 27 27 HIS B 215 PHE B 227 1 13 HELIX 28 28 PHE B 227 CYS B 234 1 8 HELIX 29 29 ALA B 236 LYS B 241 5 6 HELIX 30 30 SER B 246 TYR B 253 1 8 HELIX 31 31 ARG B 295 ALA B 303 1 9 HELIX 32 32 MET B 317 GLN B 325 1 9 HELIX 33 33 GLN B 325 ALA B 334 1 10 HELIX 34 34 THR B 347 LEU B 354 5 8 SHEET 1 A10 MET A 15 PHE A 17 0 SHEET 2 A10 LEU A 44 VAL A 47 1 O LYS A 46 N PHE A 17 SHEET 3 A10 PHE A 267 THR A 270 -1 O ILE A 269 N ALA A 45 SHEET 4 A10 TYR A 195 GLY A 203 -1 N ASN A 198 O MET A 268 SHEET 5 A10 ASN A 284 PHE A 291 -1 O GLU A 287 N TYR A 199 SHEET 6 A10 TYR A 175 GLY A 179 -1 N TYR A 177 O ALA A 286 SHEET 7 A10 ILE A 131 ASN A 137 -1 N GLY A 133 O PHE A 178 SHEET 8 A10 ILE A 71 GLN A 78 -1 N ILE A 71 O TYR A 132 SHEET 9 A10 LEU A 81 GLN A 88 -1 O TYR A 85 N LEU A 74 SHEET 10 A10 THR A 243 ILE A 245 -1 O LEU A 244 N PHE A 82 SHEET 1 B 2 VAL A 66 ILE A 67 0 SHEET 2 B 2 MET A 92 THR A 93 -1 O MET A 92 N ILE A 67 SHEET 1 C 4 SER A 184 HIS A 188 0 SHEET 2 C 4 TYR A 275 ASN A 280 -1 O GLY A 278 N PHE A 185 SHEET 3 C 4 LYS A 206 VAL A 211 -1 N TYR A 209 O ALA A 277 SHEET 4 C 4 ASP A 258 GLN A 262 -1 O VAL A 260 N TRP A 208 SHEET 1 D10 MET B 15 PHE B 17 0 SHEET 2 D10 LEU B 44 VAL B 47 1 O LYS B 46 N MET B 15 SHEET 3 D10 PHE B 267 THR B 270 -1 O ILE B 269 N ALA B 45 SHEET 4 D10 TYR B 195 GLY B 203 -1 N ASN B 198 O MET B 268 SHEET 5 D10 ASN B 284 PHE B 291 -1 O GLU B 287 N TYR B 199 SHEET 6 D10 TYR B 175 GLY B 179 -1 N TYR B 177 O ALA B 286 SHEET 7 D10 ILE B 131 ASN B 137 -1 N GLY B 133 O PHE B 178 SHEET 8 D10 ILE B 71 GLN B 78 -1 N ILE B 71 O TYR B 132 SHEET 9 D10 LEU B 81 GLN B 88 -1 O TYR B 85 N LEU B 74 SHEET 10 D10 THR B 243 ILE B 245 -1 O LEU B 244 N PHE B 82 SHEET 1 E 2 VAL B 66 ILE B 67 0 SHEET 2 E 2 MET B 92 THR B 93 -1 O MET B 92 N ILE B 67 SHEET 1 F 4 SER B 184 HIS B 188 0 SHEET 2 F 4 TYR B 275 ASN B 280 -1 O GLY B 278 N PHE B 185 SHEET 3 F 4 LYS B 206 VAL B 211 -1 N TYR B 209 O ALA B 277 SHEET 4 F 4 ASP B 258 GLN B 262 -1 O GLN B 262 N LYS B 206 LINK NE2 HIS A 188 NI NI A 501 1555 1555 2.31 LINK OE2 GLU A 190 NI NI A 501 1555 1555 2.41 LINK SG CYS A 234 ZN ZN A 502 1555 1555 2.46 LINK NE2 HIS A 240 ZN ZN A 502 1555 1555 2.35 LINK SG CYS A 306 ZN ZN A 502 1555 1555 2.38 LINK SG CYS A 308 ZN ZN A 502 1555 1555 2.55 LINK O HOH A 484 NI NI A 501 1555 1555 2.53 LINK NI NI A 501 OAR HQ2 A 503 1555 1555 2.23 LINK NI NI A 501 NAA HQ2 A 503 1555 1555 2.25 LINK NI NI A 501 O HOH A 529 1555 1555 2.57 LINK NE2 HIS B 188 NI NI B 501 1555 1555 2.30 LINK OE2 GLU B 190 NI NI B 501 1555 1555 2.42 LINK SG CYS B 234 ZN ZN B 502 1555 1555 2.44 LINK SG CYS B 306 ZN ZN B 502 1555 1555 2.37 LINK SG CYS B 308 ZN ZN B 502 1555 1555 2.53 LINK O HOH B 467 NI NI B 501 1555 1555 2.43 LINK NI NI B 501 OAR HQ2 B 503 1555 1555 2.17 LINK NI NI B 501 NAA HQ2 B 503 1555 1555 2.35 SITE 1 AC1 5 HIS A 188 GLU A 190 HOH A 484 HQ2 A 503 SITE 2 AC1 5 HOH A 529 SITE 1 AC2 4 CYS A 234 HIS A 240 CYS A 306 CYS A 308 SITE 1 AC3 13 TYR A 132 ASP A 135 TYR A 177 PHE A 185 SITE 2 AC3 13 HIS A 188 GLU A 190 LYS A 206 TRP A 208 SITE 3 AC3 13 HIS A 276 HOH A 456 HOH A 486 NI A 501 SITE 4 AC3 13 HOH A 521 SITE 1 AC4 5 LYS A 217 TYR A 273 GLN A 302 HOH A 386 SITE 2 AC4 5 HOH A 387 SITE 1 AC5 5 HIS B 188 GLU B 190 HOH B 467 HQ2 B 503 SITE 2 AC5 5 HOH B 508 SITE 1 AC6 4 CYS B 234 HIS B 240 CYS B 306 CYS B 308 SITE 1 AC7 13 TYR B 132 ASP B 135 PHE B 185 HIS B 188 SITE 2 AC7 13 GLU B 190 LYS B 206 TRP B 208 HIS B 276 SITE 3 AC7 13 HOH B 432 HOH B 467 NI B 501 HOH B 514 SITE 4 AC7 13 HOH B 542 SITE 1 AC8 5 TYR B 59 ASP B 60 ARG B 98 PHE B 283 SITE 2 AC8 5 HOH B 533 CRYST1 100.820 149.340 57.154 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009919 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006696 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017497 0.00000