HEADER IMMUNE SYSTEM 06-MAY-11 3RVT TITLE STRUCTURE OF 4C1 FAB IN P212121 SPACE GROUP COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB FRAGMENT OF 4C1 ANTIBODY - LIGHT CHAIN; COMPND 3 CHAIN: C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FAB FRAGMENT OF 4C1 ANTIBODY - HEAVY CHAIN; COMPND 7 CHAIN: D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: HYBRIDOMA; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_COMMON: MOUSE; SOURCE 11 ORGANISM_TAXID: 10090; SOURCE 12 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 14 EXPRESSION_SYSTEM_CELL_LINE: HYBRIDOMA KEYWDS IGG, ANTIBODY, DER F 1, DER P 1, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR M.CHRUSZCZ,L.D.VAILES,M.D.CHAPMAN,A.POMES,W.MINOR REVDAT 3 13-APR-22 3RVT 1 AUTHOR JRNL REVDAT 2 23-MAY-12 3RVT 1 JRNL REVDAT 1 11-JAN-12 3RVT 0 JRNL AUTH M.CHRUSZCZ,A.POMES,J.GLESNER,L.D.VAILES,T.OSINSKI, JRNL AUTH 2 P.J.POREBSKI,K.A.MAJOREK,P.W.HEYMANN,T.A.PLATTS-MILLS, JRNL AUTH 3 W.MINOR,M.D.CHAPMAN JRNL TITL MOLECULAR DETERMINANTS FOR ANTIBODY BINDING ON GROUP 1 HOUSE JRNL TITL 2 DUST MITE ALLERGENS. JRNL REF J.BIOL.CHEM. V. 287 7388 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 22210776 JRNL DOI 10.1074/JBC.M111.311159 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 28688 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1524 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2075 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.38 REMARK 3 BIN R VALUE (WORKING SET) : 0.2520 REMARK 3 BIN FREE R VALUE SET COUNT : 105 REMARK 3 BIN FREE R VALUE : 0.2990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3378 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 219 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.71000 REMARK 3 B22 (A**2) : 1.30000 REMARK 3 B33 (A**2) : -0.59000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.203 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.173 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.137 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.918 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3482 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2318 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4751 ; 1.680 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5673 ; 4.271 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 435 ; 6.821 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 140 ;34.681 ;24.071 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 559 ;15.114 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;20.471 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 532 ; 0.117 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3855 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 695 ; 0.013 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2176 ; 0.829 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 873 ; 0.000 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3551 ; 1.512 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1306 ; 2.281 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1200 ; 3.446 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 107 REMARK 3 ORIGIN FOR THE GROUP (A): 13.9150 -9.6550 -10.4560 REMARK 3 T TENSOR REMARK 3 T11: 0.1700 T22: 0.2270 REMARK 3 T33: 0.2998 T12: 0.0388 REMARK 3 T13: 0.0675 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 3.7944 L22: 3.5105 REMARK 3 L33: 3.7802 L12: 0.3022 REMARK 3 L13: -0.6033 L23: 1.6347 REMARK 3 S TENSOR REMARK 3 S11: -0.0770 S12: 0.1415 S13: -0.5300 REMARK 3 S21: 0.4444 S22: -0.0957 S23: 0.2930 REMARK 3 S31: 0.5542 S32: -0.0198 S33: 0.1726 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 108 C 212 REMARK 3 ORIGIN FOR THE GROUP (A): -18.9000 -0.4240 4.5440 REMARK 3 T TENSOR REMARK 3 T11: 0.0433 T22: 0.3485 REMARK 3 T33: 0.2634 T12: -0.0086 REMARK 3 T13: 0.0262 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 4.4826 L22: 3.2506 REMARK 3 L33: 3.1977 L12: -0.6568 REMARK 3 L13: -2.2514 L23: 1.0867 REMARK 3 S TENSOR REMARK 3 S11: -0.1976 S12: 0.2501 S13: -0.3833 REMARK 3 S21: -0.1455 S22: 0.0169 S23: -0.0812 REMARK 3 S31: 0.1206 S32: -0.5951 S33: 0.1807 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 121 REMARK 3 ORIGIN FOR THE GROUP (A): 22.2410 6.6490 0.4790 REMARK 3 T TENSOR REMARK 3 T11: 0.0341 T22: 0.3143 REMARK 3 T33: 0.1727 T12: 0.0021 REMARK 3 T13: 0.0233 T23: 0.0264 REMARK 3 L TENSOR REMARK 3 L11: 3.4613 L22: 1.8176 REMARK 3 L33: 2.1880 L12: -0.3991 REMARK 3 L13: -0.1131 L23: 0.8086 REMARK 3 S TENSOR REMARK 3 S11: -0.0068 S12: -0.0674 S13: 0.0214 REMARK 3 S21: 0.0101 S22: 0.0728 S23: -0.0015 REMARK 3 S31: 0.0063 S32: 0.4713 S33: -0.0660 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 122 D 222 REMARK 3 ORIGIN FOR THE GROUP (A): -8.0280 0.3860 15.7810 REMARK 3 T TENSOR REMARK 3 T11: 0.1078 T22: 0.3228 REMARK 3 T33: 0.3030 T12: 0.0346 REMARK 3 T13: -0.0027 T23: 0.1066 REMARK 3 L TENSOR REMARK 3 L11: 6.3185 L22: 3.4424 REMARK 3 L33: 2.4268 L12: 1.9013 REMARK 3 L13: -1.1457 L23: 0.1229 REMARK 3 S TENSOR REMARK 3 S11: 0.0469 S12: -0.6533 S13: -0.4693 REMARK 3 S21: 0.2923 S22: -0.0737 S23: 0.0921 REMARK 3 S31: 0.2849 S32: -0.0516 S33: 0.0268 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3RVT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1000065438. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30422 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : 0.05800 REMARK 200 FOR THE DATA SET : 30.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.56400 REMARK 200 R SYM FOR SHELL (I) : 0.56400 REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000, MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL, 15% W/V PEG4000, 0.1M REMARK 280 KCL, PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.52500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.47400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.82800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.47400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.52500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.82800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS D 223 REMARK 465 GLY D 224 REMARK 465 CYS D 225 REMARK 465 LYS D 226 REMARK 465 PRO D 227 REMARK 465 CYS D 228 REMARK 465 ILE D 229 REMARK 465 CYS D 230 REMARK 465 THR D 231 REMARK 465 VAL D 232 REMARK 465 PRO D 233 REMARK 465 GLU D 234 REMARK 465 VAL D 235 REMARK 465 SER D 236 REMARK 465 SER D 237 REMARK 465 VAL D 238 REMARK 465 PHE D 239 REMARK 465 ILE D 240 REMARK 465 PHE D 241 REMARK 465 PRO D 242 REMARK 465 PRO D 243 REMARK 465 LYS D 244 REMARK 465 PRO D 245 REMARK 465 LYS D 246 REMARK 465 ASP D 247 REMARK 465 VAL D 248 REMARK 465 LEU D 249 REMARK 465 THR D 250 REMARK 465 ILE D 251 REMARK 465 THR D 252 REMARK 465 LEU D 253 REMARK 465 THR D 254 REMARK 465 PRO D 255 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP D 222 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER C 31 19.07 59.46 REMARK 500 ALA C 51 -46.71 73.61 REMARK 500 SER C 77 68.85 62.93 REMARK 500 GLU C 81 5.80 -68.72 REMARK 500 SER D 15 -11.11 85.76 REMARK 500 TYR D 33 170.41 83.77 REMARK 500 ASN D 44 -3.33 85.59 REMARK 500 ASN D 141 -154.98 -110.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3RVU RELATED DB: PDB REMARK 900 RELATED ID: 3RVV RELATED DB: PDB REMARK 900 RELATED ID: 3RVW RELATED DB: PDB REMARK 900 RELATED ID: 3RVX RELATED DB: PDB DBREF 3RVT C 1 213 PDB 3RVT 3RVT 1 213 DBREF 3RVT D 1 243 PDB 3RVT 3RVT 1 243 SEQRES 1 C 213 GLN ILE VAL MET THR GLN SER PRO PHE SER MET TYR ALA SEQRES 2 C 213 THR LEU GLY GLU ARG VAL THR ILE THR CYS LYS ALA SER SEQRES 3 C 213 GLN ASP ILE TYR SER TYR LEU SER TRP LEU GLN GLN LYS SEQRES 4 C 213 PRO GLY LYS SER LEU LYS THR LEU ILE TYR ARG ALA ASN SEQRES 5 C 213 ARG LEU ILE THR GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 C 213 GLY SER GLY GLN ASP TYR SER LEU THR ILE SER SER LEU SEQRES 7 C 213 GLU TYR GLU ASP MET GLY ILE TYR TYR CYS LEU GLN TYR SEQRES 8 C 213 ASP GLU PHE PRO TYR THR PHE GLY GLY GLY THR LYS LEU SEQRES 9 C 213 GLU MET LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE SEQRES 10 C 213 PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SEQRES 11 C 213 SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP SEQRES 12 C 213 ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN SEQRES 13 C 213 ASN GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS SEQRES 14 C 213 ASP SER THR TYR SER MET SER SER THR LEU THR LEU THR SEQRES 15 C 213 LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU SEQRES 16 C 213 ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER SEQRES 17 C 213 PHE ASN ARG ASN GLU SEQRES 1 D 255 GLU VAL GLN LEU GLN GLU SER GLY PRO GLY LEU VAL LYS SEQRES 2 D 255 PRO SER GLN SER LEU SER LEU THR CYS THR VAL THR GLY SEQRES 3 D 255 TYR SER ILE THR SER ASP TYR ALA TRP ASN TRP ILE ARG SEQRES 4 D 255 GLN PHE PRO GLY ASN LYS LEU GLU TRP MET GLY TYR ILE SEQRES 5 D 255 SER TYR SER GLY THR THR SER TYR ASN PRO SER LEU LYS SEQRES 6 D 255 SER ARG ILE SER ILE THR ARG ASP THR SER LYS ASN GLN SEQRES 7 D 255 PHE PHE LEU GLN LEU ASN SER VAL THR THR GLU ASP THR SEQRES 8 D 255 ALA THR TYR TYR CYS GLY ARG THR GLY VAL TYR ARG TYR SEQRES 9 D 255 PRO GLU ARG ALA PRO TYR TRP GLY GLN GLY THR LEU VAL SEQRES 10 D 255 THR VAL SER ALA ALA LYS THR THR PRO PRO SER VAL TYR SEQRES 11 D 255 PRO LEU ALA PRO GLY SER ALA ALA GLN THR ASN SER MET SEQRES 12 D 255 VAL THR LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU SEQRES 13 D 255 PRO VAL THR VAL THR TRP ASN SER GLY SER LEU SER SER SEQRES 14 D 255 GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER ASP LEU SEQRES 15 D 255 TYR THR LEU SER SER SER VAL THR VAL PRO SER SER THR SEQRES 16 D 255 TRP PRO SER GLU THR VAL THR CYS ASN VAL ALA HIS PRO SEQRES 17 D 255 ALA SER SER THR LYS VAL ASP LYS LYS ILE VAL PRO ARG SEQRES 18 D 255 ASP CYS GLY CYS LYS PRO CYS ILE CYS THR VAL PRO GLU SEQRES 19 D 255 VAL SER SER VAL PHE ILE PHE PRO PRO LYS PRO LYS ASP SEQRES 20 D 255 VAL LEU THR ILE THR LEU THR PRO FORMUL 3 HOH *219(H2 O) HELIX 1 1 GLU C 79 MET C 83 5 5 HELIX 2 2 SER C 121 SER C 127 1 7 HELIX 3 3 LYS C 183 GLU C 187 1 5 HELIX 4 4 PRO D 62 LYS D 65 5 4 HELIX 5 5 THR D 87 THR D 91 5 5 HELIX 6 6 SER D 164 SER D 166 5 3 HELIX 7 7 PRO D 208 SER D 211 5 4 SHEET 1 A 4 MET C 4 SER C 7 0 SHEET 2 A 4 VAL C 19 ALA C 25 -1 O THR C 22 N SER C 7 SHEET 3 A 4 ASP C 70 ILE C 75 -1 O TYR C 71 N CYS C 23 SHEET 4 A 4 PHE C 62 SER C 67 -1 N SER C 63 O THR C 74 SHEET 1 B 6 SER C 10 THR C 14 0 SHEET 2 B 6 THR C 102 LYS C 107 1 O GLU C 105 N MET C 11 SHEET 3 B 6 GLY C 84 GLN C 90 -1 N GLY C 84 O LEU C 104 SHEET 4 B 6 LEU C 33 GLN C 38 -1 N SER C 34 O LEU C 89 SHEET 5 B 6 LYS C 45 TYR C 49 -1 O LEU C 47 N TRP C 35 SHEET 6 B 6 ARG C 53 LEU C 54 -1 O ARG C 53 N TYR C 49 SHEET 1 C 4 SER C 10 THR C 14 0 SHEET 2 C 4 THR C 102 LYS C 107 1 O GLU C 105 N MET C 11 SHEET 3 C 4 GLY C 84 GLN C 90 -1 N GLY C 84 O LEU C 104 SHEET 4 C 4 THR C 97 PHE C 98 -1 O THR C 97 N GLN C 90 SHEET 1 D 4 THR C 114 PHE C 118 0 SHEET 2 D 4 GLY C 129 PHE C 139 -1 O ASN C 137 N THR C 114 SHEET 3 D 4 TYR C 173 THR C 182 -1 O LEU C 181 N ALA C 130 SHEET 4 D 4 VAL C 159 TRP C 163 -1 N LEU C 160 O THR C 178 SHEET 1 E 4 SER C 153 ARG C 155 0 SHEET 2 E 4 ASN C 145 ILE C 150 -1 N TRP C 148 O ARG C 155 SHEET 3 E 4 SER C 191 THR C 197 -1 O THR C 197 N ASN C 145 SHEET 4 E 4 ILE C 205 ASN C 210 -1 O ILE C 205 N ALA C 196 SHEET 1 F 4 GLN D 3 SER D 7 0 SHEET 2 F 4 LEU D 18 THR D 25 -1 O THR D 21 N SER D 7 SHEET 3 F 4 GLN D 78 LEU D 83 -1 O LEU D 83 N LEU D 18 SHEET 4 F 4 ILE D 68 ASP D 73 -1 N ASP D 73 O GLN D 78 SHEET 1 G 6 LEU D 11 VAL D 12 0 SHEET 2 G 6 THR D 115 VAL D 119 1 O THR D 118 N VAL D 12 SHEET 3 G 6 ALA D 92 THR D 99 -1 N TYR D 94 O THR D 115 SHEET 4 G 6 ALA D 34 GLN D 40 -1 N ALA D 34 O THR D 99 SHEET 5 G 6 LEU D 46 SER D 53 -1 O GLY D 50 N TRP D 37 SHEET 6 G 6 THR D 58 TYR D 60 -1 O SER D 59 N TYR D 51 SHEET 1 H 4 LEU D 11 VAL D 12 0 SHEET 2 H 4 THR D 115 VAL D 119 1 O THR D 118 N VAL D 12 SHEET 3 H 4 ALA D 92 THR D 99 -1 N TYR D 94 O THR D 115 SHEET 4 H 4 TYR D 110 TRP D 111 -1 O TYR D 110 N ARG D 98 SHEET 1 I 4 SER D 128 LEU D 132 0 SHEET 2 I 4 MET D 143 TYR D 153 -1 O LYS D 151 N SER D 128 SHEET 3 I 4 LEU D 182 PRO D 192 -1 O TYR D 183 N TYR D 153 SHEET 4 I 4 VAL D 171 THR D 173 -1 N HIS D 172 O SER D 188 SHEET 1 J 4 SER D 128 LEU D 132 0 SHEET 2 J 4 MET D 143 TYR D 153 -1 O LYS D 151 N SER D 128 SHEET 3 J 4 LEU D 182 PRO D 192 -1 O TYR D 183 N TYR D 153 SHEET 4 J 4 VAL D 177 GLN D 179 -1 N GLN D 179 O LEU D 182 SHEET 1 K 3 THR D 159 TRP D 162 0 SHEET 2 K 3 THR D 202 HIS D 207 -1 O ALA D 206 N THR D 159 SHEET 3 K 3 THR D 212 LYS D 217 -1 O VAL D 214 N VAL D 205 SSBOND 1 CYS C 23 CYS C 88 1555 1555 2.23 SSBOND 2 CYS C 134 CYS C 194 1555 1555 1.82 SSBOND 3 CYS D 22 CYS D 96 1555 1555 2.19 SSBOND 4 CYS D 148 CYS D 203 1555 1555 2.04 CISPEP 1 SER C 7 PRO C 8 0 -8.62 CISPEP 2 PHE C 94 PRO C 95 0 -12.06 CISPEP 3 TYR C 140 PRO C 141 0 -0.55 CISPEP 4 TYR D 104 PRO D 105 0 -1.41 CISPEP 5 PHE D 154 PRO D 155 0 -12.06 CISPEP 6 GLU D 156 PRO D 157 0 0.76 CISPEP 7 TRP D 196 PRO D 197 0 4.30 CRYST1 73.050 79.656 80.948 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013689 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012554 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012354 0.00000