HEADER ISOMERASE 11-MAY-11 3RYK TITLE 1.63 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF DTDP-4-DEHYDRORHAMNOSE TITLE 2 3,5-EPIMERASE (RFBC) FROM BACILLUS ANTHRACIS STR. AMES WITH TDP AND TITLE 3 PPI BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 5.1.3.13; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS STR. AMES; SOURCE 3 ORGANISM_COMMON: ANTHRAX,ANTHRAX BACTERIUM; SOURCE 4 ORGANISM_TAXID: 198094; SOURCE 5 STRAIN: BACILLUS ANTHRACIS STR. AMES; SOURCE 6 GENE: BAS1136, BA_1229, GBAA_1229, RFBC; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21/MAGIC; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS DTDP-4-DEHYDRORHAMNOSE 3, 5-EPIMERASE, RHAMNOSE PATHWAY, STRUCTURAL KEYWDS 2 GENOMICS, INFECTIOUS DISEASES, CENTER FOR STRUCTURAL GENOMICS OF KEYWDS 3 INFECTIOUS DISEASES (CSGID), JELLY ROLL-LIKE TOPOLOGY, THE ENZYME KEYWDS 4 EPIMERIZES AT TWO CARBON CENTERS, THE 3 AND 5 POSITIONS OF THE SUGAR KEYWDS 5 RING, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.S.HALAVATY,M.KUHN,G.MINASOV,L.SHUVALOVA,K.KWON,W.F.ANDERSON,CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 6 13-SEP-23 3RYK 1 REMARK SEQADV REVDAT 5 18-APR-18 3RYK 1 JRNL REVDAT 4 13-DEC-17 3RYK 1 JRNL REVDAT 3 08-NOV-17 3RYK 1 REMARK REVDAT 2 21-JUN-17 3RYK 1 HETATM REVDAT 1 25-MAY-11 3RYK 0 JRNL AUTH A.SHORNIKOV,H.TRAN,J.MACIAS,A.S.HALAVATY,G.MINASOV, JRNL AUTH 2 W.F.ANDERSON,M.L.KUHN JRNL TITL STRUCTURE OF THE BACILLUS ANTHRACIS JRNL TITL 2 DTDP-L-RHAMNOSE-BIOSYNTHETIC ENZYME DTDP-4-DEHYDRORHAMNOSE JRNL TITL 3 3,5-EPIMERASE (RFBC). JRNL REF ACTA CRYSTALLOGR F STRUCT V. 73 664 2017 JRNL REF 2 BIOL COMMUN JRNL REFN ESSN 2053-230X JRNL PMID 29199987 JRNL DOI 10.1107/S2053230X17015849 REMARK 2 REMARK 2 RESOLUTION. 1.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.63 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 44611 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.125 REMARK 3 R VALUE (WORKING SET) : 0.123 REMARK 3 FREE R VALUE : 0.160 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 2425 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.63 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3149 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.74 REMARK 3 BIN R VALUE (WORKING SET) : 0.1530 REMARK 3 BIN FREE R VALUE SET COUNT : 201 REMARK 3 BIN FREE R VALUE : 0.2530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2814 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 266 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -19.55000 REMARK 3 B22 (A**2) : -19.55000 REMARK 3 B33 (A**2) : 39.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.015 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.946 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.981 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.972 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3001 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2024 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4091 ; 1.852 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4952 ; 0.980 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 364 ; 1.427 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 135 ;24.879 ;24.074 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 515 ; 5.831 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ; 5.375 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 447 ; 0.109 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3306 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 605 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1796 ; 1.248 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 716 ; 0.472 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2934 ; 1.897 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1205 ; 3.093 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1157 ; 4.441 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5025 ; 1.252 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 4 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.303 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : -H, H+K, -L REMARK 3 TWIN FRACTION : 0.298 REMARK 3 TWIN DOMAIN : 3 REMARK 3 TWIN OPERATOR : K, H, -L REMARK 3 TWIN FRACTION : 0.199 REMARK 3 TWIN DOMAIN : 4 REMARK 3 TWIN OPERATOR : -H,-K,L REMARK 3 TWIN FRACTION : 0.200 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3RYK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1000065536. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97919 REMARK 200 MONOCHROMATOR : SI(111) CHANNEL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47039 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.630 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.5300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.48800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.870 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1DZR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 7.5 MG/ML IN 10 MM TRIS/HCL REMARK 280 PH 8.3, 0.5 M NACL, 5 MM BME. CRYSTALLIZATION CONDITION: THE REMARK 280 JCSG+ SUITE (CONDITION A3(#3): 0.2 M DI-AMMONIUM CITRATE PH 5.0, REMARK 280 20 % W/V PEG3350). CRYSTALLIZED AT 1:1 V/V RATIO. CRYO: SOAK IN REMARK 280 THE JCSG+ A3. , VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 GLY A -14 REMARK 465 VAL A -13 REMARK 465 ASP A -12 REMARK 465 LEU A -11 REMARK 465 GLY A -10 REMARK 465 THR A -9 REMARK 465 GLU A -8 REMARK 465 ASN A -7 REMARK 465 LEU A -6 REMARK 465 TYR A -5 REMARK 465 PHE A -4 REMARK 465 GLN A -3 REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 GLN A 175 REMARK 465 GLU A 176 REMARK 465 CYS A 177 REMARK 465 GLU A 178 REMARK 465 ASP A 179 REMARK 465 SER A 180 REMARK 465 PHE A 181 REMARK 465 MET B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 SER B -16 REMARK 465 SER B -15 REMARK 465 GLY B -14 REMARK 465 VAL B -13 REMARK 465 ASP B -12 REMARK 465 LEU B -11 REMARK 465 GLY B -10 REMARK 465 THR B -9 REMARK 465 GLU B -8 REMARK 465 ASN B -7 REMARK 465 LEU B -6 REMARK 465 TYR B -5 REMARK 465 PHE B -4 REMARK 465 GLN B -3 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 GLN B 175 REMARK 465 GLU B 176 REMARK 465 CYS B 177 REMARK 465 GLU B 178 REMARK 465 ASP B 179 REMARK 465 SER B 180 REMARK 465 PHE B 181 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 9 -49.98 73.35 REMARK 500 PRO A 67 7.48 -68.75 REMARK 500 LYS A 96 -14.93 76.11 REMARK 500 SER A 144 -157.34 -139.92 REMARK 500 PRO A 158 32.87 -79.88 REMARK 500 THR B 9 -44.83 71.40 REMARK 500 LYS B 68 45.00 -104.46 REMARK 500 LYS B 96 6.48 82.56 REMARK 500 ILE B 155 97.21 -4.45 REMARK 500 PRO B 158 45.21 -92.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 277 DISTANCE = 6.71 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE POP A 182 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TYD A 183 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP01110 RELATED DB: TARGETDB DBREF 3RYK A 1 181 UNP Q81TP1 Q81TP1_BACAN 1 181 DBREF 3RYK B 1 181 UNP Q81TP1 Q81TP1_BACAN 1 181 SEQADV 3RYK MET A -23 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK HIS A -22 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK HIS A -21 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK HIS A -20 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK HIS A -19 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK HIS A -18 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK HIS A -17 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK SER A -16 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK SER A -15 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK GLY A -14 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK VAL A -13 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK ASP A -12 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK LEU A -11 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK GLY A -10 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK THR A -9 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK GLU A -8 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK ASN A -7 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK LEU A -6 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK TYR A -5 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK PHE A -4 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK GLN A -3 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK SER A -2 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK ASN A -1 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK ALA A 0 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK MET B -23 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK HIS B -22 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK HIS B -21 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK HIS B -20 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK HIS B -19 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK HIS B -18 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK HIS B -17 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK SER B -16 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK SER B -15 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK GLY B -14 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK VAL B -13 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK ASP B -12 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK LEU B -11 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK GLY B -10 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK THR B -9 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK GLU B -8 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK ASN B -7 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK LEU B -6 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK TYR B -5 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK PHE B -4 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK GLN B -3 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK SER B -2 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK ASN B -1 UNP Q81TP1 EXPRESSION TAG SEQADV 3RYK ALA B 0 UNP Q81TP1 EXPRESSION TAG SEQRES 1 A 205 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 205 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET LYS SEQRES 3 A 205 VAL ILE GLU THR ASN PHE THR ASP ALA LYS LEU LEU GLU SEQRES 4 A 205 PRO ARG LEU PHE GLY ASP ASP ARG GLY PHE PHE THR GLU SEQRES 5 A 205 SER TYR ASN LYS LYS VAL LEU GLU THR LEU GLY VAL THR SEQRES 6 A 205 HIS SER PHE VAL GLN ASP ASN VAL SER TYR SER ALA GLU SEQRES 7 A 205 ALA GLY THR ILE ARG GLY LEU HIS PHE GLN LYS ASN PRO SEQRES 8 A 205 LYS ALA GLN THR LYS LEU ILE GLN VAL MET GLN GLY ALA SEQRES 9 A 205 ILE TYR ASP VAL ILE VAL ASP LEU ARG LYS ASP SER PRO SEQRES 10 A 205 THR PHE LYS GLN TRP ARG GLY TYR ILE LEU SER ALA ASP SEQRES 11 A 205 ASN HIS ARG GLN LEU LEU VAL PRO LYS GLY PHE ALA HIS SEQRES 12 A 205 GLY PHE CYS THR LEU VAL PRO HIS THR ILE VAL MET TYR SEQRES 13 A 205 LYS VAL ASP GLU TYR TYR SER ALA ASP HIS ASP SER GLY SEQRES 14 A 205 VAL LEU TRP ASN ASP LYS GLU LEU ALA ILE PRO TRP PRO SEQRES 15 A 205 VAL THR SER PRO ILE LEU SER ASP LYS ASP ARG ILE LEU SEQRES 16 A 205 PRO LEU LEU GLN GLU CYS GLU ASP SER PHE SEQRES 1 B 205 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 205 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET LYS SEQRES 3 B 205 VAL ILE GLU THR ASN PHE THR ASP ALA LYS LEU LEU GLU SEQRES 4 B 205 PRO ARG LEU PHE GLY ASP ASP ARG GLY PHE PHE THR GLU SEQRES 5 B 205 SER TYR ASN LYS LYS VAL LEU GLU THR LEU GLY VAL THR SEQRES 6 B 205 HIS SER PHE VAL GLN ASP ASN VAL SER TYR SER ALA GLU SEQRES 7 B 205 ALA GLY THR ILE ARG GLY LEU HIS PHE GLN LYS ASN PRO SEQRES 8 B 205 LYS ALA GLN THR LYS LEU ILE GLN VAL MET GLN GLY ALA SEQRES 9 B 205 ILE TYR ASP VAL ILE VAL ASP LEU ARG LYS ASP SER PRO SEQRES 10 B 205 THR PHE LYS GLN TRP ARG GLY TYR ILE LEU SER ALA ASP SEQRES 11 B 205 ASN HIS ARG GLN LEU LEU VAL PRO LYS GLY PHE ALA HIS SEQRES 12 B 205 GLY PHE CYS THR LEU VAL PRO HIS THR ILE VAL MET TYR SEQRES 13 B 205 LYS VAL ASP GLU TYR TYR SER ALA ASP HIS ASP SER GLY SEQRES 14 B 205 VAL LEU TRP ASN ASP LYS GLU LEU ALA ILE PRO TRP PRO SEQRES 15 B 205 VAL THR SER PRO ILE LEU SER ASP LYS ASP ARG ILE LEU SEQRES 16 B 205 PRO LEU LEU GLN GLU CYS GLU ASP SER PHE HET POP A 182 9 HET TYD B 182 25 HETNAM POP PYROPHOSPHATE 2- HETNAM TYD THYMIDINE-5'-DIPHOSPHATE FORMUL 3 POP H2 O7 P2 2- FORMUL 4 TYD C10 H16 N2 O11 P2 FORMUL 5 HOH *266(H2 O) HELIX 1 1 LYS A 32 LEU A 38 1 7 HELIX 2 2 SER A 165 ILE A 170 1 6 HELIX 3 3 LYS B 32 LEU B 38 1 7 HELIX 4 4 SER B 139 ASP B 141 5 3 HELIX 5 5 SER B 165 LEU B 171 1 7 SHEET 1 A 8 LYS A 2 ASN A 7 0 SHEET 2 A 8 ALA A 11 GLU A 15 -1 O LEU A 13 N ILE A 4 SHEET 3 A 8 GLN A 110 VAL A 113 -1 O GLN A 110 N LEU A 14 SHEET 4 A 8 LYS A 72 GLN A 78 -1 N LYS A 72 O VAL A 113 SHEET 5 A 8 THR A 128 VAL A 134 -1 O MET A 131 N GLN A 75 SHEET 6 A 8 GLN A 46 SER A 52 -1 N SER A 50 O VAL A 130 SHEET 7 A 8 GLY B 24 ASN B 31 -1 O PHE B 25 N TYR A 51 SHEET 8 A 8 LEU B 18 ASP B 21 -1 N PHE B 19 O PHE B 26 SHEET 1 B 8 LEU A 18 ASP A 21 0 SHEET 2 B 8 GLY A 24 ASN A 31 -1 O GLY A 24 N ASP A 21 SHEET 3 B 8 GLN B 46 SER B 52 -1 O VAL B 49 N THR A 27 SHEET 4 B 8 THR B 128 VAL B 134 -1 O TYR B 132 N ASN B 48 SHEET 5 B 8 LYS B 72 GLN B 78 -1 N GLN B 75 O MET B 131 SHEET 6 B 8 GLN B 110 VAL B 113 -1 O VAL B 113 N LYS B 72 SHEET 7 B 8 ALA B 11 GLU B 15 -1 N LEU B 14 O GLN B 110 SHEET 8 B 8 LYS B 2 ASN B 7 -1 N LYS B 2 O GLU B 15 SHEET 1 C 5 TRP A 98 SER A 104 0 SHEET 2 C 5 ALA A 80 ASP A 87 -1 N ASP A 83 O TYR A 101 SHEET 3 C 5 PHE A 117 THR A 123 -1 O GLY A 120 N VAL A 84 SHEET 4 C 5 ILE A 58 GLN A 64 -1 N HIS A 62 O HIS A 119 SHEET 5 C 5 ASP A 143 GLY A 145 -1 O SER A 144 N PHE A 63 SHEET 1 D 5 TRP B 98 SER B 104 0 SHEET 2 D 5 ALA B 80 ASP B 87 -1 N ASP B 83 O TYR B 101 SHEET 3 D 5 PHE B 117 THR B 123 -1 O GLY B 120 N VAL B 84 SHEET 4 D 5 ILE B 58 GLN B 64 -1 N ARG B 59 O PHE B 121 SHEET 5 D 5 ASP B 143 GLY B 145 -1 O SER B 144 N PHE B 63 CISPEP 1 GLY A 60 LEU A 61 0 -0.60 CISPEP 2 ASN A 66 PRO A 67 0 0.41 CISPEP 3 GLY B 60 LEU B 61 0 -0.67 CISPEP 4 ASN B 66 PRO B 67 0 1.37 SITE 1 AC1 8 ASP A 143 SER A 165 LYS A 167 ASP A 168 SITE 2 AC1 8 HOH A 219 HOH A 220 HOH A 255 HOH A 314 SITE 1 AC2 13 PHE A 26 GLU A 28 HOH A 258 HOH A 307 SITE 2 AC2 13 HOH A 313 GLN B 46 ASN B 48 TYR B 138 SITE 3 AC2 13 SER B 165 LYS B 167 ASP B 168 HOH B 225 SITE 4 AC2 13 HOH B 290 CRYST1 86.652 86.652 45.101 90.00 90.00 120.00 P 3 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011540 0.006663 0.000000 0.00000 SCALE2 0.000000 0.013326 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022172 0.00000