HEADER HYDROLASE 11-MAY-11 3RZ2 TITLE CRYSTAL OF PRL-1 COMPLEXED WITH PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN TYROSINE PHOSPHATASE TYPE IVA 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1-169; COMPND 5 SYNONYM: PROTEIN-TYROSINE PHOSPHATASE 4A1, PROTEIN-TYROSINE COMPND 6 PHOSPHATASE OF REGENERATING LIVER 1, PRL-1; COMPND 7 EC: 3.1.3.48; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: PRL-1 (PTP4A1); COMPND 11 CHAIN: C, D; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: NORWAY RAT, ORGANISM_TAXID: 10116, PRL1, PTP4A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES KEYWDS TYROSINE PHOSPHATASE, PRL-1, DUAL SPECIFIC PHOSPHATASE, COMPLEXED KEYWDS 2 WITH PEPTIDE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.-Y.ZHANG,D.LIU,Y.BAI REVDAT 4 06-NOV-24 3RZ2 1 SEQADV REVDAT 3 29-OCT-14 3RZ2 1 AUTHOR REVDAT 2 19-JUN-13 3RZ2 1 JRNL REVDAT 1 26-OCT-11 3RZ2 0 JRNL AUTH Y.BAI,Y.LUO,S.LIU,L.ZHANG,K.SHEN,Y.DONG,C.D.WALLS, JRNL AUTH 2 L.A.QUILLIAM,C.D.WELLS,Y.CAO,Z.Y.ZHANG JRNL TITL PRL-1 PROTEIN PROMOTES ERK1/2 AND RHOA PROTEIN ACTIVATION JRNL TITL 2 THROUGH A NON-CANONICAL INTERACTION WITH THE SRC HOMOLOGY 3 JRNL TITL 3 DOMAIN OF P115 RHO GTPASE-ACTIVATING PROTEIN. JRNL REF J.BIOL.CHEM. V. 286 42316 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 22009749 JRNL DOI 10.1074/JBC.M111.286302 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.500 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 13030 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 437 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2425 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 38 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.330 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3RZ2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1000065554. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13030 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM ACNA, 2.0M AMMONIUM SULFATE, PH REMARK 280 4.8, VAPOR DIFFUSION, TEMPERATURE 277K , VAPOR DIFFUSION, REMARK 280 HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 73.25650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.25650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 73.25650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 73.25650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 73.25650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 73.25650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 73.25650 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 73.25650 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 73.25650 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 73.25650 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 73.25650 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 73.25650 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 73.25650 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 73.25650 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 73.25650 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 73.25650 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 73.25650 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 73.25650 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 73.25650 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 73.25650 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 73.25650 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 73.25650 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 73.25650 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 73.25650 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 73.25650 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 73.25650 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 73.25650 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 73.25650 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 73.25650 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 73.25650 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 73.25650 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 73.25650 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 73.25650 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 73.25650 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 73.25650 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 73.25650 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ARG A 3 REMARK 465 MET A 4 REMARK 465 ASN A 5 REMARK 465 ARG A 6 REMARK 465 PRO A 7 REMARK 465 ALA A 8 REMARK 465 LYS A 161 REMARK 465 ASP A 162 REMARK 465 SER A 163 REMARK 465 ASN A 164 REMARK 465 GLY A 165 REMARK 465 HIS A 166 REMARK 465 ARG A 167 REMARK 465 ASN A 168 REMARK 465 ASN A 169 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ARG B 3 REMARK 465 MET B 4 REMARK 465 ASN B 5 REMARK 465 ARG B 6 REMARK 465 PRO B 7 REMARK 465 ALA B 8 REMARK 465 LYS B 161 REMARK 465 ASP B 162 REMARK 465 SER B 163 REMARK 465 ASN B 164 REMARK 465 GLY B 165 REMARK 465 HIS B 166 REMARK 465 ARG B 167 REMARK 465 ASN B 168 REMARK 465 ASN B 169 REMARK 465 GLY C 1 REMARK 465 TRP C 2 REMARK 465 TRP C 3 REMARK 465 GLY D 1 REMARK 465 TRP D 2 REMARK 465 TRP D 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 30 CG CD1 CD2 REMARK 470 ASN A 31 CG OD1 ND2 REMARK 470 LYS A 32 CG CD CE NZ REMARK 470 GLU A 35 CG CD OE1 OE2 REMARK 470 GLU A 36 CG CD OE1 OE2 REMARK 470 LYS A 38 CG CD CE NZ REMARK 470 GLU A 50 CG CD OE1 OE2 REMARK 470 LEU A 57 CG CD1 CD2 REMARK 470 LYS A 60 CG CD CE NZ REMARK 470 ASP A 71 CG OD1 OD2 REMARK 470 ARG A 93 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 102 CG1 CG2 REMARK 470 VAL A 105 CG1 CG2 REMARK 470 LEU A 108 CG CD1 CD2 REMARK 470 LYS A 144 CG CD CE NZ REMARK 470 LYS A 151 CG CD CE NZ REMARK 470 LYS A 155 CG CD CE NZ REMARK 470 ARG A 157 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 27 CG OD1 ND2 REMARK 470 THR B 29 OG1 CG2 REMARK 470 LEU B 30 CG CD1 CD2 REMARK 470 LYS B 32 CG CD CE NZ REMARK 470 GLU B 35 CG CD OE1 OE2 REMARK 470 GLU B 36 CG CD OE1 OE2 REMARK 470 LYS B 38 CG CD CE NZ REMARK 470 VAL B 46 CG1 CG2 REMARK 470 VAL B 48 CG1 CG2 REMARK 470 GLU B 50 CG CD OE1 OE2 REMARK 470 ASP B 54 CG OD1 OD2 REMARK 470 LEU B 57 CG CD1 CD2 REMARK 470 VAL B 58 CG1 CG2 REMARK 470 GLU B 59 CG CD OE1 OE2 REMARK 470 LYS B 60 CG CD CE NZ REMARK 470 VAL B 65 CG1 CG2 REMARK 470 ASP B 71 CG OD1 OD2 REMARK 470 ILE B 80 CG1 CG2 CD1 REMARK 470 ASP B 82 CG OD1 OD2 REMARK 470 LYS B 89 CG CD CE NZ REMARK 470 ILE B 90 CG1 CG2 CD1 REMARK 470 ARG B 93 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 95 CG CD OE1 OE2 REMARK 470 LEU B 108 CG CD1 CD2 REMARK 470 LYS B 125 CG CD CE NZ REMARK 470 LYS B 136 CD CE NZ REMARK 470 SER B 143 OG REMARK 470 LYS B 144 CG CD CE NZ REMARK 470 LYS B 151 CG CD CE NZ REMARK 470 LYS B 155 CD CE NZ REMARK 470 ARG B 157 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 14 119.64 -173.64 REMARK 500 LYS A 15 -131.43 55.88 REMARK 500 ASN A 24 98.64 -45.08 REMARK 500 TYR A 53 160.92 179.48 REMARK 500 PRO A 69 -159.86 -84.50 REMARK 500 PHE A 70 142.34 157.90 REMARK 500 PRO A 76 88.17 -65.82 REMARK 500 SER A 77 -146.35 28.78 REMARK 500 ASN A 78 -30.60 -132.73 REMARK 500 ASP A 82 -73.12 -54.45 REMARK 500 ILE A 90 -74.77 -69.40 REMARK 500 LYS A 91 -39.08 -37.44 REMARK 500 ALA A 106 -74.06 -76.12 REMARK 500 LEU A 114 -71.65 -62.87 REMARK 500 GLU A 121 3.52 -69.13 REMARK 500 ARG A 134 -3.25 -59.91 REMARK 500 PHE A 141 64.16 76.44 REMARK 500 SER A 143 -47.77 -20.30 REMARK 500 ARG A 157 54.66 -109.04 REMARK 500 LYS B 15 -119.12 59.22 REMARK 500 HIS B 23 -109.52 -81.57 REMARK 500 LEU B 30 -72.42 -7.13 REMARK 500 ASN B 31 -78.15 -45.38 REMARK 500 GLU B 35 -86.94 -66.16 REMARK 500 CYS B 49 -127.07 -109.12 REMARK 500 GLU B 50 -165.13 -71.34 REMARK 500 THR B 52 38.24 -168.17 REMARK 500 ASP B 71 119.46 -27.75 REMARK 500 PRO B 75 140.54 -29.87 REMARK 500 SER B 77 143.26 77.72 REMARK 500 ASN B 78 -6.62 -56.05 REMARK 500 LYS B 89 -71.99 -57.64 REMARK 500 ILE B 90 -81.26 -45.86 REMARK 500 CYS B 104 -81.09 -103.63 REMARK 500 VAL B 105 -38.86 160.67 REMARK 500 ALA B 106 40.74 -96.97 REMARK 500 LEU B 108 -131.61 82.21 REMARK 500 LEU B 119 -74.80 -67.44 REMARK 500 MET B 124 113.10 76.75 REMARK 500 ARG B 137 -28.46 -146.76 REMARK 500 ARG B 138 -8.59 48.62 REMARK 500 PHE B 141 146.98 65.34 REMARK 500 SER B 143 -39.39 -32.03 REMARK 500 MET B 156 0.22 105.09 REMARK 500 ARG B 157 14.40 -52.55 REMARK 500 LEU C 5 -62.59 -137.92 REMARK 500 ILE C 6 -174.41 43.61 REMARK 500 PRO C 8 -101.44 -81.20 REMARK 500 LYS C 9 -139.71 33.06 REMARK 500 TYR C 10 177.43 54.65 REMARK 500 REMARK 500 THIS ENTRY HAS 54 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN C OF PRL-1 (PTP4A1) REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN D OF PRL-1 (PTP4A1) DBREF 3RZ2 A 1 169 UNP Q78EG7 TP4A1_RAT 1 169 DBREF 3RZ2 B 1 169 UNP Q78EG7 TP4A1_RAT 1 169 DBREF 3RZ2 C 1 12 PDB 3RZ2 3RZ2 1 12 DBREF 3RZ2 D 1 12 PDB 3RZ2 3RZ2 1 12 SEQADV 3RZ2 MET A -19 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 GLY A -18 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 SER A -17 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 SER A -16 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 HIS A -15 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 HIS A -14 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 HIS A -13 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 HIS A -12 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 HIS A -11 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 HIS A -10 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 SER A -9 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 SER A -8 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 GLY A -7 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 LEU A -6 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 VAL A -5 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 PRO A -4 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 ARG A -3 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 GLY A -2 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 SER A -1 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 HIS A 0 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 MET B -19 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 GLY B -18 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 SER B -17 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 SER B -16 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 HIS B -15 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 HIS B -14 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 HIS B -13 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 HIS B -12 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 HIS B -11 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 HIS B -10 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 SER B -9 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 SER B -8 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 GLY B -7 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 LEU B -6 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 VAL B -5 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 PRO B -4 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 ARG B -3 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 GLY B -2 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 SER B -1 UNP Q78EG7 EXPRESSION TAG SEQADV 3RZ2 HIS B 0 UNP Q78EG7 EXPRESSION TAG SEQRES 1 A 189 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 189 LEU VAL PRO ARG GLY SER HIS MET ALA ARG MET ASN ARG SEQRES 3 A 189 PRO ALA PRO VAL GLU VAL THR TYR LYS ASN MET ARG PHE SEQRES 4 A 189 LEU ILE THR HIS ASN PRO THR ASN ALA THR LEU ASN LYS SEQRES 5 A 189 PHE ILE GLU GLU LEU LYS LYS TYR GLY VAL THR THR ILE SEQRES 6 A 189 VAL ARG VAL CYS GLU ALA THR TYR ASP THR THR LEU VAL SEQRES 7 A 189 GLU LYS GLU GLY ILE HIS VAL LEU ASP TRP PRO PHE ASP SEQRES 8 A 189 ASP GLY ALA PRO PRO SER ASN GLN ILE VAL ASP ASP TRP SEQRES 9 A 189 LEU SER LEU VAL LYS ILE LYS PHE ARG GLU GLU PRO GLY SEQRES 10 A 189 CYS CYS ILE ALA VAL HIS CYS VAL ALA GLY LEU GLY ARG SEQRES 11 A 189 ALA PRO VAL LEU VAL ALA LEU ALA LEU ILE GLU GLY GLY SEQRES 12 A 189 MET LYS TYR GLU ASP ALA VAL GLN PHE ILE ARG GLN LYS SEQRES 13 A 189 ARG ARG GLY ALA PHE ASN SER LYS GLN LEU LEU TYR LEU SEQRES 14 A 189 GLU LYS TYR ARG PRO LYS MET ARG LEU ARG PHE LYS ASP SEQRES 15 A 189 SER ASN GLY HIS ARG ASN ASN SEQRES 1 B 189 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 189 LEU VAL PRO ARG GLY SER HIS MET ALA ARG MET ASN ARG SEQRES 3 B 189 PRO ALA PRO VAL GLU VAL THR TYR LYS ASN MET ARG PHE SEQRES 4 B 189 LEU ILE THR HIS ASN PRO THR ASN ALA THR LEU ASN LYS SEQRES 5 B 189 PHE ILE GLU GLU LEU LYS LYS TYR GLY VAL THR THR ILE SEQRES 6 B 189 VAL ARG VAL CYS GLU ALA THR TYR ASP THR THR LEU VAL SEQRES 7 B 189 GLU LYS GLU GLY ILE HIS VAL LEU ASP TRP PRO PHE ASP SEQRES 8 B 189 ASP GLY ALA PRO PRO SER ASN GLN ILE VAL ASP ASP TRP SEQRES 9 B 189 LEU SER LEU VAL LYS ILE LYS PHE ARG GLU GLU PRO GLY SEQRES 10 B 189 CYS CYS ILE ALA VAL HIS CYS VAL ALA GLY LEU GLY ARG SEQRES 11 B 189 ALA PRO VAL LEU VAL ALA LEU ALA LEU ILE GLU GLY GLY SEQRES 12 B 189 MET LYS TYR GLU ASP ALA VAL GLN PHE ILE ARG GLN LYS SEQRES 13 B 189 ARG ARG GLY ALA PHE ASN SER LYS GLN LEU LEU TYR LEU SEQRES 14 B 189 GLU LYS TYR ARG PRO LYS MET ARG LEU ARG PHE LYS ASP SEQRES 15 B 189 SER ASN GLY HIS ARG ASN ASN SEQRES 1 C 12 GLY TRP TRP SER LEU ILE PRO PRO LYS TYR ILE THR SEQRES 1 D 12 GLY TRP TRP SER LEU ILE PRO PRO LYS TYR ILE THR FORMUL 5 HOH *38(H2 O) HELIX 1 1 THR A 29 LYS A 39 1 11 HELIX 2 2 THR A 55 GLU A 61 1 7 HELIX 3 3 ASN A 78 GLU A 95 1 18 HELIX 4 4 ARG A 110 GLU A 121 1 12 HELIX 5 5 LYS A 125 GLN A 135 1 11 HELIX 6 6 ASN A 142 TYR A 152 1 11 HELIX 7 7 THR B 29 LYS B 39 1 11 HELIX 8 8 ASP B 54 LYS B 60 1 7 HELIX 9 9 PRO B 76 GLU B 95 1 20 HELIX 10 10 GLY B 109 GLY B 122 1 14 HELIX 11 11 LYS B 125 GLN B 135 1 11 HELIX 12 12 ASN B 142 LYS B 151 1 10 SHEET 1 A 5 VAL A 12 TYR A 14 0 SHEET 2 A 5 MET A 17 THR A 22 -1 O PHE A 19 N VAL A 12 SHEET 3 A 5 CYS A 99 HIS A 103 1 O ILE A 100 N ARG A 18 SHEET 4 A 5 VAL A 42 ARG A 47 1 N THR A 44 O ALA A 101 SHEET 5 A 5 HIS A 64 ASP A 67 1 O LEU A 66 N ARG A 47 SHEET 1 B 4 VAL B 10 TYR B 14 0 SHEET 2 B 4 MET B 17 THR B 22 -1 O PHE B 19 N VAL B 12 SHEET 3 B 4 CYS B 99 HIS B 103 1 O ILE B 100 N ARG B 18 SHEET 4 B 4 VAL B 42 ARG B 47 1 N VAL B 46 O ALA B 101 SSBOND 1 CYS A 49 CYS A 104 1555 1555 2.04 SSBOND 2 CYS B 49 CYS B 104 1555 1555 2.03 SITE 1 AC1 20 ARG A 47 TYR A 53 ASP A 54 THR A 55 SITE 2 AC1 20 THR A 56 GLU A 59 HIS A 64 VAL A 65 SITE 3 AC1 20 LEU A 66 ASP A 67 TRP A 68 LYS A 89 SITE 4 AC1 20 ILE A 90 ARG A 93 ARG A 153 ARG A 157 SITE 5 AC1 20 ARG A 159 SER B 86 ARG B 157 ARG B 159 SITE 1 AC2 7 ASP B 54 THR B 55 THR B 56 TRP B 68 SITE 2 AC2 7 ASP B 83 HOH D 20 HOH D 36 CRYST1 146.513 146.513 146.513 90.00 90.00 90.00 I 21 3 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006825 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006825 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006825 0.00000