HEADER MOTOR PROTEIN 13-MAY-11 3S0W TITLE THE CRYSTAL STRUCTURE OF THE PERIPLASMIC DOMAIN OF HELICOBACTER PYLORI TITLE 2 MOTB (RESIDUES 78-256). COMPND MOL_ID: 1; COMPND 2 MOLECULE: MOTILITY PROTEIN B; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: C-TERMINAL FRAGMENT (UNP RESIDUES 79-257); COMPND 5 SYNONYM: CHEMOTAXIS PROTEIN MOTB; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; SOURCE 3 ORGANISM_TAXID: 85962; SOURCE 4 STRAIN: 26695; SOURCE 5 GENE: HP_0816, MOTB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET-151-D-TOPO KEYWDS PEPTIDOGLYCAN BINDING, FLAGELLAR ROTATION, CHEMOTAXIS, BACTERIAL KEYWDS 2 FLAGELLAR MOTOR, MEMBRANE, MOTOR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.R.ROUJEINIKOVA REVDAT 2 28-FEB-24 3S0W 1 REMARK SEQADV REVDAT 1 14-MAR-12 3S0W 0 JRNL AUTH J.O'NEILL,M.XIE,M.HIJNEN,A.ROUJEINIKOVA JRNL TITL ROLE OF THE MOTB LINKER IN THE ASSEMBLY AND ACTIVATION OF JRNL TITL 2 THE BACTERIAL FLAGELLAR MOTOR. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 67 1009 2011 JRNL REFN ISSN 0907-4449 JRNL PMID 22120737 JRNL DOI 10.1107/S0907444911041102 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.O'NEILL,A.ROUJEINIKOVA REMARK 1 TITL CLONING, PURIFICATION AND CRYSTALLIZATION OF MOTB, A STATOR REMARK 1 TITL 2 COMPONENT OF THE PROTON-DRIVEN BACTERIAL FLAGELLAR MOTOR. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 64 561 2008 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 18540076 REMARK 1 DOI 10.1107/S1744309108012219 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 12850 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 624 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 874 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.81 REMARK 3 BIN R VALUE (WORKING SET) : 0.2320 REMARK 3 BIN FREE R VALUE SET COUNT : 40 REMARK 3 BIN FREE R VALUE : 0.3760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2504 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 89 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.72000 REMARK 3 B22 (A**2) : 0.72000 REMARK 3 B33 (A**2) : -1.44000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.726 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.306 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.207 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.110 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.896 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2705 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3679 ; 1.453 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 341 ; 6.305 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 135 ;36.715 ;24.667 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 486 ;17.175 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;22.415 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 410 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2086 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1668 ; 0.826 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2728 ; 1.574 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1037 ; 2.159 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 951 ; 3.684 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 93 A 251 REMARK 3 ORIGIN FOR THE GROUP (A): 12.1090 39.8590 23.7530 REMARK 3 T TENSOR REMARK 3 T11: 0.2039 T22: 0.1592 REMARK 3 T33: 0.0461 T12: 0.0338 REMARK 3 T13: 0.0127 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 2.7998 L22: 1.7083 REMARK 3 L33: 1.1026 L12: 0.4722 REMARK 3 L13: 0.4104 L23: 0.0509 REMARK 3 S TENSOR REMARK 3 S11: -0.2615 S12: -0.0031 S13: 0.1683 REMARK 3 S21: -0.0827 S22: 0.2268 S23: 0.1641 REMARK 3 S31: 0.0373 S32: -0.1849 S33: 0.0347 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 94 B 251 REMARK 3 ORIGIN FOR THE GROUP (A): 24.0940 27.7880 23.1580 REMARK 3 T TENSOR REMARK 3 T11: 0.2410 T22: 0.1444 REMARK 3 T33: 0.2208 T12: 0.0556 REMARK 3 T13: 0.0639 T23: -0.0605 REMARK 3 L TENSOR REMARK 3 L11: 2.6338 L22: 1.7756 REMARK 3 L33: 1.4355 L12: 0.7791 REMARK 3 L13: -0.4182 L23: 0.7529 REMARK 3 S TENSOR REMARK 3 S11: -0.2661 S12: 0.0635 S13: -0.5914 REMARK 3 S21: 0.0132 S22: 0.2638 S23: -0.5123 REMARK 3 S31: 0.3518 S32: 0.0861 S33: 0.0023 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3S0W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1000065620. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.87 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.1 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12864 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 64.282 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : 0.06700 REMARK 200 FOR THE DATA SET : 17.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.33300 REMARK 200 R SYM FOR SHELL (I) : 0.33300 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS PH 8.5, 2.5 M AS , VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.25350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 37.35200 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 37.35200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 94.88025 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 37.35200 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 37.35200 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 31.62675 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 37.35200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.35200 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 94.88025 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 37.35200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.35200 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 31.62675 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 63.25350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -157.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 74.70400 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 74.70400 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 63.25350 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 72 REMARK 465 ILE A 73 REMARK 465 ASP A 74 REMARK 465 PRO A 75 REMARK 465 PHE A 76 REMARK 465 THR A 77 REMARK 465 GLU A 78 REMARK 465 GLU A 79 REMARK 465 GLN A 80 REMARK 465 MET A 81 REMARK 465 ALA A 82 REMARK 465 SER A 83 REMARK 465 GLU A 84 REMARK 465 SER A 85 REMARK 465 SER A 86 REMARK 465 LYS A 87 REMARK 465 PRO A 88 REMARK 465 ALA A 89 REMARK 465 SER A 90 REMARK 465 GLN A 91 REMARK 465 ALA A 100 REMARK 465 ARG A 101 REMARK 465 LYS A 102 REMARK 465 HIS A 252 REMARK 465 LYS A 253 REMARK 465 GLN A 254 REMARK 465 GLN A 255 REMARK 465 GLU A 256 REMARK 465 GLY B 72 REMARK 465 ILE B 73 REMARK 465 ASP B 74 REMARK 465 PRO B 75 REMARK 465 PHE B 76 REMARK 465 THR B 77 REMARK 465 GLU B 78 REMARK 465 GLU B 79 REMARK 465 GLN B 80 REMARK 465 MET B 81 REMARK 465 ALA B 82 REMARK 465 SER B 83 REMARK 465 GLU B 84 REMARK 465 SER B 85 REMARK 465 SER B 86 REMARK 465 LYS B 87 REMARK 465 PRO B 88 REMARK 465 ALA B 89 REMARK 465 SER B 90 REMARK 465 GLN B 91 REMARK 465 ASN B 92 REMARK 465 HIS B 252 REMARK 465 LYS B 253 REMARK 465 GLN B 254 REMARK 465 GLN B 255 REMARK 465 GLU B 256 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE B 99 CG1 CG2 CD1 REMARK 470 LEU B 123 CG CD1 CD2 REMARK 470 MET B 137 CG SD CE REMARK 470 TYR B 140 CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 177 O HOH A 280 2.14 REMARK 500 O HOH B 263 O HOH B 272 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 93 35.72 -93.86 REMARK 500 THR A 98 -131.25 -134.08 REMARK 500 LEU A 124 -41.56 -136.94 REMARK 500 ASN A 134 121.79 -36.45 REMARK 500 LYS A 170 -35.74 -21.11 REMARK 500 ASN A 210 57.62 -116.94 REMARK 500 ASN A 210 61.51 -119.86 REMARK 500 SER A 217 -137.50 -159.33 REMARK 500 ASP A 234 40.02 -103.04 REMARK 500 ASP A 234 46.69 -107.60 REMARK 500 ILE B 99 -54.96 -144.48 REMARK 500 ASP B 164 -179.02 -66.66 REMARK 500 ASN B 250 -101.41 -104.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1002 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3S02 RELATED DB: PDB REMARK 900 RELATED ID: 3S03 RELATED DB: PDB REMARK 900 RELATED ID: 3S06 RELATED DB: PDB REMARK 900 RELATED ID: 3S0H RELATED DB: PDB REMARK 900 RELATED ID: 3S0Y RELATED DB: PDB DBREF 3S0W A 78 256 UNP P56427 MOTB_HELPY 79 257 DBREF 3S0W B 78 256 UNP P56427 MOTB_HELPY 79 257 SEQADV 3S0W GLY A 72 UNP P56427 EXPRESSION TAG SEQADV 3S0W ILE A 73 UNP P56427 EXPRESSION TAG SEQADV 3S0W ASP A 74 UNP P56427 EXPRESSION TAG SEQADV 3S0W PRO A 75 UNP P56427 EXPRESSION TAG SEQADV 3S0W PHE A 76 UNP P56427 EXPRESSION TAG SEQADV 3S0W THR A 77 UNP P56427 EXPRESSION TAG SEQADV 3S0W GLY B 72 UNP P56427 EXPRESSION TAG SEQADV 3S0W ILE B 73 UNP P56427 EXPRESSION TAG SEQADV 3S0W ASP B 74 UNP P56427 EXPRESSION TAG SEQADV 3S0W PRO B 75 UNP P56427 EXPRESSION TAG SEQADV 3S0W PHE B 76 UNP P56427 EXPRESSION TAG SEQADV 3S0W THR B 77 UNP P56427 EXPRESSION TAG SEQRES 1 A 185 GLY ILE ASP PRO PHE THR GLU GLU GLN MET ALA SER GLU SEQRES 2 A 185 SER SER LYS PRO ALA SER GLN ASN THR GLU THR LYS ALA SEQRES 3 A 185 THR ILE ALA ARG LYS GLY GLU GLY SER VAL LEU GLU GLN SEQRES 4 A 185 ILE ASP GLN GLY SER ILE LEU LYS LEU PRO SER ASN LEU SEQRES 5 A 185 LEU PHE GLU ASN ALA THR SER ASP ALA ILE ASN GLN ASP SEQRES 6 A 185 MET MET LEU TYR ILE GLU ARG ILE ALA LYS ILE ILE GLN SEQRES 7 A 185 LYS LEU PRO LYS ARG VAL HIS ILE ASN VAL ARG GLY PHE SEQRES 8 A 185 THR ASP ASP THR PRO LEU VAL LYS THR ARG PHE LYS SER SEQRES 9 A 185 HIS TYR GLU LEU ALA ALA ASN ARG ALA TYR ARG VAL MET SEQRES 10 A 185 LYS VAL LEU ILE GLN TYR GLY VAL ASN PRO ASN GLN LEU SEQRES 11 A 185 SER PHE SER SER TYR GLY SER THR ASN PRO ILE ALA PRO SEQRES 12 A 185 ASN ASP SER LEU GLU ASN ARG MET LYS ASN ASN ARG VAL SEQRES 13 A 185 GLU ILE PHE PHE SER THR ASP ALA ASN ASP LEU SER LYS SEQRES 14 A 185 ILE HIS SER ILE LEU ASP ASN GLU PHE ASN PRO HIS LYS SEQRES 15 A 185 GLN GLN GLU SEQRES 1 B 185 GLY ILE ASP PRO PHE THR GLU GLU GLN MET ALA SER GLU SEQRES 2 B 185 SER SER LYS PRO ALA SER GLN ASN THR GLU THR LYS ALA SEQRES 3 B 185 THR ILE ALA ARG LYS GLY GLU GLY SER VAL LEU GLU GLN SEQRES 4 B 185 ILE ASP GLN GLY SER ILE LEU LYS LEU PRO SER ASN LEU SEQRES 5 B 185 LEU PHE GLU ASN ALA THR SER ASP ALA ILE ASN GLN ASP SEQRES 6 B 185 MET MET LEU TYR ILE GLU ARG ILE ALA LYS ILE ILE GLN SEQRES 7 B 185 LYS LEU PRO LYS ARG VAL HIS ILE ASN VAL ARG GLY PHE SEQRES 8 B 185 THR ASP ASP THR PRO LEU VAL LYS THR ARG PHE LYS SER SEQRES 9 B 185 HIS TYR GLU LEU ALA ALA ASN ARG ALA TYR ARG VAL MET SEQRES 10 B 185 LYS VAL LEU ILE GLN TYR GLY VAL ASN PRO ASN GLN LEU SEQRES 11 B 185 SER PHE SER SER TYR GLY SER THR ASN PRO ILE ALA PRO SEQRES 12 B 185 ASN ASP SER LEU GLU ASN ARG MET LYS ASN ASN ARG VAL SEQRES 13 B 185 GLU ILE PHE PHE SER THR ASP ALA ASN ASP LEU SER LYS SEQRES 14 B 185 ILE HIS SER ILE LEU ASP ASN GLU PHE ASN PRO HIS LYS SEQRES 15 B 185 GLN GLN GLU HET SO4 A1000 5 HET SO4 A1001 5 HET SO4 B1002 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 3(O4 S 2-) FORMUL 6 HOH *89(H2 O) HELIX 1 1 PRO A 120 LEU A 124 5 5 HELIX 2 2 ASN A 134 ASP A 136 5 3 HELIX 3 3 MET A 137 GLN A 149 1 13 HELIX 4 4 SER A 175 TYR A 194 1 20 HELIX 5 5 ASN A 197 ASN A 199 5 3 HELIX 6 6 LEU A 218 ASN A 225 1 8 HELIX 7 7 ASN A 236 ASN A 250 1 15 HELIX 8 8 PRO B 120 PHE B 125 1 6 HELIX 9 9 MET B 137 LYS B 150 1 14 HELIX 10 10 SER B 175 TYR B 194 1 20 HELIX 11 11 ASN B 197 ASN B 199 5 3 HELIX 12 12 SER B 217 ASN B 224 1 8 HELIX 13 13 ASN B 236 ASN B 250 1 15 SHEET 1 A12 GLU A 94 LYS A 96 0 SHEET 2 A12 VAL A 107 ILE A 111 -1 O LEU A 108 N THR A 95 SHEET 3 A12 GLY A 114 LEU A 119 -1 O ILE A 116 N GLU A 109 SHEET 4 A12 VAL A 227 SER A 232 -1 O VAL A 227 N LEU A 119 SHEET 5 A12 HIS A 156 GLY A 161 -1 N ARG A 160 O GLU A 228 SHEET 6 A12 LEU A 201 SER A 205 1 O SER A 202 N VAL A 159 SHEET 7 A12 LEU B 201 SER B 205 -1 O SER B 205 N PHE A 203 SHEET 8 A12 HIS B 156 GLY B 161 1 N VAL B 159 O SER B 204 SHEET 9 A12 VAL B 227 SER B 232 -1 O GLU B 228 N ARG B 160 SHEET 10 A12 GLY B 114 LEU B 119 -1 N LEU B 119 O VAL B 227 SHEET 11 A12 VAL B 107 ILE B 111 -1 N VAL B 107 O LYS B 118 SHEET 12 A12 GLU B 94 LYS B 96 -1 N THR B 95 O LEU B 108 SITE 1 AC1 4 TYR A 185 ARG A 186 ASN A 215 HOH A 275 SITE 1 AC2 4 HOH A 29 SER A 175 HIS A 176 TYR A 177 SITE 1 AC3 7 ALA B 100 ARG B 101 LYS B 102 GLY B 103 SITE 2 AC3 7 GLU B 104 GLY B 105 SER B 106 CRYST1 74.704 74.704 126.507 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013386 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013386 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007905 0.00000