HEADER MOTOR PROTEIN 13-MAY-11 3S0Y TITLE THE CRYSTAL STRUCTURE OF THE PERIPLASMIC DOMAIN OF MOTB (RESIDUES 64- TITLE 2 256). COMPND MOL_ID: 1; COMPND 2 MOLECULE: MOTILITY PROTEIN B; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: N-TERMINALLY TRUNCATED (UNP RESIDUES 65-257); COMPND 5 SYNONYM: CHEMOTAXIS PROTEIN MOTB; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; SOURCE 3 ORGANISM_TAXID: 85962; SOURCE 4 STRAIN: 26695; SOURCE 5 GENE: HP_0816, MOTB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET-151-D-TOPO KEYWDS PEPTIDOGLYCAN BINDING, FLAGELLAR ROTATION, CHEMOTAXIS, BACTERIAL KEYWDS 2 FLAGELLAR MOTOR, MEMBRANE, MOTOR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.R.ROUJEINIKOVA,J.O'NEILL,M.XIE REVDAT 2 28-FEB-24 3S0Y 1 REMARK REVDAT 1 14-MAR-12 3S0Y 0 JRNL AUTH J.O'NEILL,M.XIE,M.HIJNEN,A.ROUJEINIKOVA JRNL TITL ROLE OF THE MOTB LINKER IN THE ASSEMBLY AND ACTIVATION OF JRNL TITL 2 THE BACTERIAL FLAGELLAR MOTOR. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 67 1009 2011 JRNL REFN ISSN 0907-4449 JRNL PMID 22120737 JRNL DOI 10.1107/S0907444911041102 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.O'NEILL,A.ROUJEINIKOVA REMARK 1 TITL CLONING, PURIFICATION AND CRYSTALLIZATION OF MOTB, A STATOR REMARK 1 TITL 2 COMPONENT OF THE PROTON-DRIVEN BACTERIAL FLAGELLAR MOTOR. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 64 561 2008 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 18540076 REMARK 1 DOI 10.1107/S1744309108012219 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.72 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.4 REMARK 3 NUMBER OF REFLECTIONS : 30668 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1566 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2113 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.97 REMARK 3 BIN R VALUE (WORKING SET) : 0.2460 REMARK 3 BIN FREE R VALUE SET COUNT : 102 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2737 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 225 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.88000 REMARK 3 B22 (A**2) : 0.88000 REMARK 3 B33 (A**2) : -1.76000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.145 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.137 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.087 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.177 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2936 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1960 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4008 ; 1.325 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4830 ; 0.886 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 380 ; 5.897 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 141 ;37.032 ;25.390 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 521 ;14.343 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;16.259 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 454 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3337 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 548 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1840 ; 0.736 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 722 ; 0.183 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3015 ; 1.350 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1096 ; 2.122 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 990 ; 3.538 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 64 A 89 REMARK 3 ORIGIN FOR THE GROUP (A): -1.0280 50.5730 64.6260 REMARK 3 T TENSOR REMARK 3 T11: 0.3704 T22: 0.2111 REMARK 3 T33: 0.1152 T12: -0.0910 REMARK 3 T13: 0.1648 T23: 0.0443 REMARK 3 L TENSOR REMARK 3 L11: 3.1668 L22: 4.1418 REMARK 3 L33: 11.4432 L12: -3.4057 REMARK 3 L13: -2.7524 L23: 5.0040 REMARK 3 S TENSOR REMARK 3 S11: 0.6821 S12: 0.3573 S13: 0.5815 REMARK 3 S21: -0.9918 S22: -0.1028 S23: -0.6534 REMARK 3 S31: -1.5185 S32: 0.8652 S33: -0.5793 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 93 A 234 REMARK 3 ORIGIN FOR THE GROUP (A): 7.8180 39.9790 22.4700 REMARK 3 T TENSOR REMARK 3 T11: 0.0408 T22: 0.0367 REMARK 3 T33: 0.0203 T12: 0.0218 REMARK 3 T13: -0.0062 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 1.2525 L22: 1.2110 REMARK 3 L33: 1.6156 L12: 0.3024 REMARK 3 L13: -0.1700 L23: -0.0185 REMARK 3 S TENSOR REMARK 3 S11: -0.0507 S12: 0.0021 S13: 0.0861 REMARK 3 S21: -0.0719 S22: 0.0698 S23: 0.1454 REMARK 3 S31: -0.0974 S32: -0.1774 S33: -0.0192 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 235 A 252 REMARK 3 ORIGIN FOR THE GROUP (A): 44.1030 39.4540 28.3100 REMARK 3 T TENSOR REMARK 3 T11: 0.0930 T22: 0.1560 REMARK 3 T33: 0.2477 T12: 0.0282 REMARK 3 T13: -0.0067 T23: -0.1313 REMARK 3 L TENSOR REMARK 3 L11: 13.4835 L22: 1.5275 REMARK 3 L33: 4.5005 L12: -3.5727 REMARK 3 L13: 4.2517 L23: 0.1445 REMARK 3 S TENSOR REMARK 3 S11: 0.1213 S12: -0.0165 S13: -0.5726 REMARK 3 S21: 0.0674 S22: 0.2310 S23: -0.0358 REMARK 3 S31: 0.3057 S32: 0.3518 S33: -0.3523 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 92 B 234 REMARK 3 ORIGIN FOR THE GROUP (A): 24.7890 24.6400 21.0970 REMARK 3 T TENSOR REMARK 3 T11: 0.0877 T22: 0.0397 REMARK 3 T33: 0.0902 T12: 0.0475 REMARK 3 T13: 0.0056 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 1.9819 L22: 1.4889 REMARK 3 L33: 1.8952 L12: -0.2324 REMARK 3 L13: -0.1551 L23: 0.3752 REMARK 3 S TENSOR REMARK 3 S11: 0.0182 S12: 0.0330 S13: -0.2942 REMARK 3 S21: -0.0013 S22: 0.0682 S23: -0.2029 REMARK 3 S31: 0.2688 S32: 0.1544 S33: -0.0863 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 235 B 251 REMARK 3 ORIGIN FOR THE GROUP (A): 20.1860 56.5750 38.3670 REMARK 3 T TENSOR REMARK 3 T11: 0.0228 T22: 0.0752 REMARK 3 T33: 0.0834 T12: 0.0122 REMARK 3 T13: -0.0043 T23: -0.0318 REMARK 3 L TENSOR REMARK 3 L11: 2.0124 L22: 12.8809 REMARK 3 L33: 1.9861 L12: -0.6989 REMARK 3 L13: 0.3330 L23: 1.8010 REMARK 3 S TENSOR REMARK 3 S11: -0.0704 S12: -0.0680 S13: 0.2920 REMARK 3 S21: -0.0064 S22: 0.0324 S23: 0.4129 REMARK 3 S31: -0.0585 S32: -0.1173 S33: 0.0380 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3S0Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-MAY-11. REMARK 100 THE DEPOSITION ID IS D_1000065622. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.004 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30716 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.1 M AMMONIUM SULPHATE, 100 MM MES REMARK 280 MONOHYDRATE PH 6.5 AND 2.5% V/V 1,4-DIOXANE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.35350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 37.60500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 37.60500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 93.53025 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 37.60500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 37.60500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 31.17675 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 37.60500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.60500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 93.53025 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 37.60500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.60500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 31.17675 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 62.35350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -57.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -161.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 75.21000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 75.21000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 62.35350 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 253 REMARK 465 GLN A 254 REMARK 465 GLN A 255 REMARK 465 GLU A 256 REMARK 465 MET B 64 REMARK 465 GLN B 65 REMARK 465 PRO B 66 REMARK 465 VAL B 67 REMARK 465 VAL B 68 REMARK 465 VAL B 69 REMARK 465 ILE B 70 REMARK 465 PRO B 71 REMARK 465 PRO B 72 REMARK 465 ASP B 73 REMARK 465 SER B 74 REMARK 465 GLY B 75 REMARK 465 LYS B 76 REMARK 465 GLU B 77 REMARK 465 GLU B 78 REMARK 465 GLU B 79 REMARK 465 GLN B 80 REMARK 465 MET B 81 REMARK 465 ALA B 82 REMARK 465 SER B 83 REMARK 465 GLU B 84 REMARK 465 SER B 85 REMARK 465 SER B 86 REMARK 465 LYS B 87 REMARK 465 PRO B 88 REMARK 465 ALA B 89 REMARK 465 SER B 90 REMARK 465 GLN B 91 REMARK 465 HIS B 252 REMARK 465 LYS B 253 REMARK 465 GLN B 254 REMARK 465 GLN B 255 REMARK 465 GLU B 256 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 64 CG SD CE REMARK 470 SER A 83 OG REMARK 470 GLU A 84 CG CD OE1 OE2 REMARK 470 SER A 86 OG REMARK 470 LYS A 87 CG CD CE NZ REMARK 470 GLN A 91 CG CD OE1 NE2 REMARK 470 ARG A 101 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 102 CG CD CE NZ REMARK 470 LYS B 102 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 315 O HOH A 335 1.76 REMARK 500 O HOH A 315 O HOH A 334 1.85 REMARK 500 O HOH A 321 O HOH A 335 1.92 REMARK 500 ND2 ASN B 210 O HOH B 318 2.12 REMARK 500 OH TYR A 177 O HOH B 330 2.13 REMARK 500 O HOH B 21 O HOH B 338 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 83 25.79 -79.69 REMARK 500 LYS A 102 11.16 -162.47 REMARK 500 LEU A 124 -47.88 -135.45 REMARK 500 ASN A 215 45.32 -94.07 REMARK 500 ASN B 215 45.75 -81.29 REMARK 500 ASN B 250 -83.81 -75.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1003 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3S02 RELATED DB: PDB REMARK 900 RELATED ID: 3S03 RELATED DB: PDB REMARK 900 RELATED ID: 3S06 RELATED DB: PDB REMARK 900 RELATED ID: 3S0H RELATED DB: PDB REMARK 900 RELATED ID: 3S0W RELATED DB: PDB DBREF 3S0Y A 64 256 UNP P56427 MOTB_HELPY 65 257 DBREF 3S0Y B 64 256 UNP P56427 MOTB_HELPY 65 257 SEQRES 1 A 193 MET GLN PRO VAL VAL VAL ILE PRO PRO ASP SER GLY LYS SEQRES 2 A 193 GLU GLU GLU GLN MET ALA SER GLU SER SER LYS PRO ALA SEQRES 3 A 193 SER GLN ASN THR GLU THR LYS ALA THR ILE ALA ARG LYS SEQRES 4 A 193 GLY GLU GLY SER VAL LEU GLU GLN ILE ASP GLN GLY SER SEQRES 5 A 193 ILE LEU LYS LEU PRO SER ASN LEU LEU PHE GLU ASN ALA SEQRES 6 A 193 THR SER ASP ALA ILE ASN GLN ASP MET MET LEU TYR ILE SEQRES 7 A 193 GLU ARG ILE ALA LYS ILE ILE GLN LYS LEU PRO LYS ARG SEQRES 8 A 193 VAL HIS ILE ASN VAL ARG GLY PHE THR ASP ASP THR PRO SEQRES 9 A 193 LEU VAL LYS THR ARG PHE LYS SER HIS TYR GLU LEU ALA SEQRES 10 A 193 ALA ASN ARG ALA TYR ARG VAL MET LYS VAL LEU ILE GLN SEQRES 11 A 193 TYR GLY VAL ASN PRO ASN GLN LEU SER PHE SER SER TYR SEQRES 12 A 193 GLY SER THR ASN PRO ILE ALA PRO ASN ASP SER LEU GLU SEQRES 13 A 193 ASN ARG MET LYS ASN ASN ARG VAL GLU ILE PHE PHE SER SEQRES 14 A 193 THR ASP ALA ASN ASP LEU SER LYS ILE HIS SER ILE LEU SEQRES 15 A 193 ASP ASN GLU PHE ASN PRO HIS LYS GLN GLN GLU SEQRES 1 B 193 MET GLN PRO VAL VAL VAL ILE PRO PRO ASP SER GLY LYS SEQRES 2 B 193 GLU GLU GLU GLN MET ALA SER GLU SER SER LYS PRO ALA SEQRES 3 B 193 SER GLN ASN THR GLU THR LYS ALA THR ILE ALA ARG LYS SEQRES 4 B 193 GLY GLU GLY SER VAL LEU GLU GLN ILE ASP GLN GLY SER SEQRES 5 B 193 ILE LEU LYS LEU PRO SER ASN LEU LEU PHE GLU ASN ALA SEQRES 6 B 193 THR SER ASP ALA ILE ASN GLN ASP MET MET LEU TYR ILE SEQRES 7 B 193 GLU ARG ILE ALA LYS ILE ILE GLN LYS LEU PRO LYS ARG SEQRES 8 B 193 VAL HIS ILE ASN VAL ARG GLY PHE THR ASP ASP THR PRO SEQRES 9 B 193 LEU VAL LYS THR ARG PHE LYS SER HIS TYR GLU LEU ALA SEQRES 10 B 193 ALA ASN ARG ALA TYR ARG VAL MET LYS VAL LEU ILE GLN SEQRES 11 B 193 TYR GLY VAL ASN PRO ASN GLN LEU SER PHE SER SER TYR SEQRES 12 B 193 GLY SER THR ASN PRO ILE ALA PRO ASN ASP SER LEU GLU SEQRES 13 B 193 ASN ARG MET LYS ASN ASN ARG VAL GLU ILE PHE PHE SER SEQRES 14 B 193 THR ASP ALA ASN ASP LEU SER LYS ILE HIS SER ILE LEU SEQRES 15 B 193 ASP ASN GLU PHE ASN PRO HIS LYS GLN GLN GLU HET SO4 A1001 5 HET SO4 B1002 5 HET SO4 B1003 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 3(O4 S 2-) FORMUL 6 HOH *225(H2 O) HELIX 1 1 GLY A 75 SER A 83 1 9 HELIX 2 2 PRO A 120 LEU A 124 5 5 HELIX 3 3 ASN A 134 ASP A 136 5 3 HELIX 4 4 MET A 137 LYS A 150 1 14 HELIX 5 5 SER A 175 TYR A 194 1 20 HELIX 6 6 ASN A 197 ASN A 199 5 3 HELIX 7 7 SER A 217 ASN A 225 1 9 HELIX 8 8 ASN A 236 ASN A 250 1 15 HELIX 9 9 PRO B 120 PHE B 125 1 6 HELIX 10 10 ASN B 134 ASP B 136 5 3 HELIX 11 11 MET B 137 GLN B 149 1 13 HELIX 12 12 SER B 175 TYR B 194 1 20 HELIX 13 13 ASN B 197 ASN B 199 5 3 HELIX 14 14 SER B 217 ASN B 224 1 8 HELIX 15 15 ASN B 236 ASN B 250 1 15 SHEET 1 A12 GLU A 94 ILE A 99 0 SHEET 2 A12 GLY A 103 ILE A 111 -1 O SER A 106 N ALA A 97 SHEET 3 A12 GLY A 114 LEU A 119 -1 O ILE A 116 N GLU A 109 SHEET 4 A12 VAL A 227 SER A 232 -1 O ILE A 229 N LEU A 117 SHEET 5 A12 HIS A 156 GLY A 161 -1 N ARG A 160 O GLU A 228 SHEET 6 A12 LEU A 201 SER A 205 1 O SER A 202 N VAL A 159 SHEET 7 A12 LEU B 201 SER B 205 -1 O PHE B 203 N SER A 205 SHEET 8 A12 HIS B 156 GLY B 161 1 N VAL B 159 O SER B 204 SHEET 9 A12 VAL B 227 SER B 232 -1 O GLU B 228 N ARG B 160 SHEET 10 A12 GLY B 114 LEU B 119 -1 N LEU B 117 O ILE B 229 SHEET 11 A12 VAL B 107 ILE B 111 -1 N VAL B 107 O LYS B 118 SHEET 12 A12 GLU B 94 LYS B 96 -1 N THR B 95 O LEU B 108 SITE 1 AC1 5 HOH A 29 SER A 175 HIS A 176 TYR A 177 SITE 2 AC1 5 HOH A 260 SITE 1 AC2 10 LYS B 96 ILE B 99 ALA B 100 ARG B 101 SITE 2 AC2 10 LYS B 102 GLY B 103 GLU B 104 GLY B 105 SITE 3 AC2 10 SER B 106 LEU B 123 SITE 1 AC3 7 HOH B 26 HOH B 37 SER B 175 HIS B 176 SITE 2 AC3 7 TYR B 177 HOH B 280 HOH B 322 CRYST1 75.210 75.210 124.707 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013296 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013296 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008019 0.00000