data_3S4G # _entry.id 3S4G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3S4G pdb_00003s4g 10.2210/pdb3s4g/pdb NDB NA1233 ? ? RCSB RCSB065748 ? ? WWPDB D_1000065748 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-08-03 2 'Structure model' 1 1 2011-10-05 3 'Structure model' 1 2 2012-05-23 4 'Structure model' 1 3 2017-11-08 5 'Structure model' 1 4 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Source and taxonomy' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' entity 6 5 'Structure model' entity_name_com 7 5 'Structure model' entity_src_gen 8 5 'Structure model' pdbx_entity_src_syn 9 5 'Structure model' pdbx_struct_oper_list 10 5 'Structure model' struct_ref 11 5 'Structure model' struct_ref_seq # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_entity.pdbx_description' 4 5 'Structure model' '_entity_src_gen.pdbx_beg_seq_num' 5 5 'Structure model' '_entity_src_gen.pdbx_end_seq_num' 6 5 'Structure model' '_entity_src_gen.pdbx_gene_src_scientific_name' 7 5 'Structure model' '_entity_src_gen.pdbx_seq_type' 8 5 'Structure model' '_pdbx_struct_oper_list.name' 9 5 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 10 5 'Structure model' '_pdbx_struct_oper_list.type' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3S4G _pdbx_database_status.recvd_initial_deposition_date 2011-05-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3RQV . unspecified PDB 1VTZ . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lane, S.W.' 1 'Dennis, C.A.' 2 'Lane, C.L.' 3 'Trinh, C.H.' 4 'Rizkallah, P.J.' 5 'Stockley, P.G.' 6 'Phillips, S.E.V.' 7 # _citation.id primary _citation.title 'Construction and crystal structure of recombinant STNV capsids.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 413 _citation.page_first 41 _citation.page_last 50 _citation.year 2011 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21839089 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2011.07.062 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lane, S.W.' 1 ? primary 'Dennis, C.A.' 2 ? primary 'Lane, C.L.' 3 ? primary 'Trinh, C.H.' 4 ? primary 'Rizkallah, P.J.' 5 ? primary 'Stockley, P.G.' 6 ? primary 'Phillips, S.E.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Capsid protein' 21739.645 1 ? ? ? ? 2 polymer syn ;RNA (5'-R(P*AP*AP*A)-3') ; 942.660 1 ? ? ? ? 3 polymer syn ;RNA (5'-R(P*UP*UP*UP*U)-3') ; 1179.706 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Coat protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MAKQQNNRRKSATMRAVKRMINTHLEHKRFALINSGNTNATAGTVQNLSNGIIQGDDINQRSGDQVRIVSHKLHVRGTAI TVSQTFRFIWFRDNMNRGTTPTVLEVLNTANFMSQYNPITLQQKRFTILKDVTLNCSLTGESIKDRIINLPGQLVNYNGA TAVAASNGPGAIFMLQIGDSLVGLWDSSYEAVYTDA ; ;MAKQQNNRRKSATMRAVKRMINTHLEHKRFALINSGNTNATAGTVQNLSNGIIQGDDINQRSGDQVRIVSHKLHVRGTAI TVSQTFRFIWFRDNMNRGTTPTVLEVLNTANFMSQYNPITLQQKRFTILKDVTLNCSLTGESIKDRIINLPGQLVNYNGA TAVAASNGPGAIFMLQIGDSLVGLWDSSYEAVYTDA ; A ? 2 polyribonucleotide no no AAA AAA B ? 3 polyribonucleotide no no UUUU UUUU C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 LYS n 1 4 GLN n 1 5 GLN n 1 6 ASN n 1 7 ASN n 1 8 ARG n 1 9 ARG n 1 10 LYS n 1 11 SER n 1 12 ALA n 1 13 THR n 1 14 MET n 1 15 ARG n 1 16 ALA n 1 17 VAL n 1 18 LYS n 1 19 ARG n 1 20 MET n 1 21 ILE n 1 22 ASN n 1 23 THR n 1 24 HIS n 1 25 LEU n 1 26 GLU n 1 27 HIS n 1 28 LYS n 1 29 ARG n 1 30 PHE n 1 31 ALA n 1 32 LEU n 1 33 ILE n 1 34 ASN n 1 35 SER n 1 36 GLY n 1 37 ASN n 1 38 THR n 1 39 ASN n 1 40 ALA n 1 41 THR n 1 42 ALA n 1 43 GLY n 1 44 THR n 1 45 VAL n 1 46 GLN n 1 47 ASN n 1 48 LEU n 1 49 SER n 1 50 ASN n 1 51 GLY n 1 52 ILE n 1 53 ILE n 1 54 GLN n 1 55 GLY n 1 56 ASP n 1 57 ASP n 1 58 ILE n 1 59 ASN n 1 60 GLN n 1 61 ARG n 1 62 SER n 1 63 GLY n 1 64 ASP n 1 65 GLN n 1 66 VAL n 1 67 ARG n 1 68 ILE n 1 69 VAL n 1 70 SER n 1 71 HIS n 1 72 LYS n 1 73 LEU n 1 74 HIS n 1 75 VAL n 1 76 ARG n 1 77 GLY n 1 78 THR n 1 79 ALA n 1 80 ILE n 1 81 THR n 1 82 VAL n 1 83 SER n 1 84 GLN n 1 85 THR n 1 86 PHE n 1 87 ARG n 1 88 PHE n 1 89 ILE n 1 90 TRP n 1 91 PHE n 1 92 ARG n 1 93 ASP n 1 94 ASN n 1 95 MET n 1 96 ASN n 1 97 ARG n 1 98 GLY n 1 99 THR n 1 100 THR n 1 101 PRO n 1 102 THR n 1 103 VAL n 1 104 LEU n 1 105 GLU n 1 106 VAL n 1 107 LEU n 1 108 ASN n 1 109 THR n 1 110 ALA n 1 111 ASN n 1 112 PHE n 1 113 MET n 1 114 SER n 1 115 GLN n 1 116 TYR n 1 117 ASN n 1 118 PRO n 1 119 ILE n 1 120 THR n 1 121 LEU n 1 122 GLN n 1 123 GLN n 1 124 LYS n 1 125 ARG n 1 126 PHE n 1 127 THR n 1 128 ILE n 1 129 LEU n 1 130 LYS n 1 131 ASP n 1 132 VAL n 1 133 THR n 1 134 LEU n 1 135 ASN n 1 136 CYS n 1 137 SER n 1 138 LEU n 1 139 THR n 1 140 GLY n 1 141 GLU n 1 142 SER n 1 143 ILE n 1 144 LYS n 1 145 ASP n 1 146 ARG n 1 147 ILE n 1 148 ILE n 1 149 ASN n 1 150 LEU n 1 151 PRO n 1 152 GLY n 1 153 GLN n 1 154 LEU n 1 155 VAL n 1 156 ASN n 1 157 TYR n 1 158 ASN n 1 159 GLY n 1 160 ALA n 1 161 THR n 1 162 ALA n 1 163 VAL n 1 164 ALA n 1 165 ALA n 1 166 SER n 1 167 ASN n 1 168 GLY n 1 169 PRO n 1 170 GLY n 1 171 ALA n 1 172 ILE n 1 173 PHE n 1 174 MET n 1 175 LEU n 1 176 GLN n 1 177 ILE n 1 178 GLY n 1 179 ASP n 1 180 SER n 1 181 LEU n 1 182 VAL n 1 183 GLY n 1 184 LEU n 1 185 TRP n 1 186 ASP n 1 187 SER n 1 188 SER n 1 189 TYR n 1 190 GLU n 1 191 ALA n 1 192 VAL n 1 193 TYR n 1 194 THR n 1 195 ASP n 1 196 ALA n 2 1 A n 2 2 A n 2 3 A n 3 1 U n 3 2 U n 3 3 U n 3 4 U n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 196 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Satellite tobacco necrosis virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 12445 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 3 'Synthetic construct' ? 32630 'Arbitrary modelled RNA structure' 3 1 sample 1 4 'Synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 ? ? ? A . n A 1 2 ALA 2 1 ? ? ? A . n A 1 3 LYS 3 2 ? ? ? A . n A 1 4 GLN 4 3 ? ? ? A . n A 1 5 GLN 5 4 ? ? ? A . n A 1 6 ASN 6 5 ? ? ? A . n A 1 7 ASN 7 6 ? ? ? A . n A 1 8 ARG 8 7 ? ? ? A . n A 1 9 ARG 9 8 ? ? ? A . n A 1 10 LYS 10 9 ? ? ? A . n A 1 11 SER 11 10 ? ? ? A . n A 1 12 ALA 12 11 ? ? ? A . n A 1 13 THR 13 12 12 THR THR A . n A 1 14 MET 14 13 13 MET MET A . n A 1 15 ARG 15 14 14 ARG ARG A . n A 1 16 ALA 16 15 15 ALA ALA A . n A 1 17 VAL 17 16 16 VAL VAL A . n A 1 18 LYS 18 17 17 LYS LYS A . n A 1 19 ARG 19 18 18 ARG ARG A . n A 1 20 MET 20 19 19 MET MET A . n A 1 21 ILE 21 20 20 ILE ILE A . n A 1 22 ASN 22 21 21 ASN ASN A . n A 1 23 THR 23 22 22 THR THR A . n A 1 24 HIS 24 23 23 HIS HIS A . n A 1 25 LEU 25 24 24 LEU LEU A . n A 1 26 GLU 26 25 25 GLU GLU A . n A 1 27 HIS 27 26 26 HIS HIS A . n A 1 28 LYS 28 27 27 LYS LYS A . n A 1 29 ARG 29 28 28 ARG ARG A . n A 1 30 PHE 30 29 29 PHE PHE A . n A 1 31 ALA 31 30 30 ALA ALA A . n A 1 32 LEU 32 31 31 LEU LEU A . n A 1 33 ILE 33 32 32 ILE ILE A . n A 1 34 ASN 34 33 33 ASN ASN A . n A 1 35 SER 35 34 34 SER SER A . n A 1 36 GLY 36 35 35 GLY GLY A . n A 1 37 ASN 37 36 36 ASN ASN A . n A 1 38 THR 38 37 37 THR THR A . n A 1 39 ASN 39 38 38 ASN ASN A . n A 1 40 ALA 40 39 39 ALA ALA A . n A 1 41 THR 41 40 40 THR THR A . n A 1 42 ALA 42 41 41 ALA ALA A . n A 1 43 GLY 43 42 42 GLY GLY A . n A 1 44 THR 44 43 43 THR THR A . n A 1 45 VAL 45 44 44 VAL VAL A . n A 1 46 GLN 46 45 45 GLN GLN A . n A 1 47 ASN 47 46 46 ASN ASN A . n A 1 48 LEU 48 47 47 LEU LEU A . n A 1 49 SER 49 48 48 SER SER A . n A 1 50 ASN 50 49 49 ASN ASN A . n A 1 51 GLY 51 50 50 GLY GLY A . n A 1 52 ILE 52 51 51 ILE ILE A . n A 1 53 ILE 53 52 52 ILE ILE A . n A 1 54 GLN 54 53 53 GLN GLN A . n A 1 55 GLY 55 54 54 GLY GLY A . n A 1 56 ASP 56 55 55 ASP ASP A . n A 1 57 ASP 57 56 56 ASP ASP A . n A 1 58 ILE 58 57 57 ILE ILE A . n A 1 59 ASN 59 58 58 ASN ASN A . n A 1 60 GLN 60 59 59 GLN GLN A . n A 1 61 ARG 61 60 60 ARG ARG A . n A 1 62 SER 62 61 61 SER SER A . n A 1 63 GLY 63 62 62 GLY GLY A . n A 1 64 ASP 64 63 63 ASP ASP A . n A 1 65 GLN 65 64 64 GLN GLN A . n A 1 66 VAL 66 65 65 VAL VAL A . n A 1 67 ARG 67 66 66 ARG ARG A . n A 1 68 ILE 68 67 67 ILE ILE A . n A 1 69 VAL 69 68 68 VAL VAL A . n A 1 70 SER 70 69 69 SER SER A . n A 1 71 HIS 71 70 70 HIS HIS A . n A 1 72 LYS 72 71 71 LYS LYS A . n A 1 73 LEU 73 72 72 LEU LEU A . n A 1 74 HIS 74 73 73 HIS HIS A . n A 1 75 VAL 75 74 74 VAL VAL A . n A 1 76 ARG 76 75 75 ARG ARG A . n A 1 77 GLY 77 76 76 GLY GLY A . n A 1 78 THR 78 77 77 THR THR A . n A 1 79 ALA 79 78 78 ALA ALA A . n A 1 80 ILE 80 79 79 ILE ILE A . n A 1 81 THR 81 80 80 THR THR A . n A 1 82 VAL 82 81 81 VAL VAL A . n A 1 83 SER 83 82 82 SER SER A . n A 1 84 GLN 84 83 83 GLN GLN A . n A 1 85 THR 85 84 84 THR THR A . n A 1 86 PHE 86 85 85 PHE PHE A . n A 1 87 ARG 87 86 86 ARG ARG A . n A 1 88 PHE 88 87 87 PHE PHE A . n A 1 89 ILE 89 88 88 ILE ILE A . n A 1 90 TRP 90 89 89 TRP TRP A . n A 1 91 PHE 91 90 90 PHE PHE A . n A 1 92 ARG 92 91 91 ARG ARG A . n A 1 93 ASP 93 92 92 ASP ASP A . n A 1 94 ASN 94 93 93 ASN ASN A . n A 1 95 MET 95 94 94 MET MET A . n A 1 96 ASN 96 95 95 ASN ASN A . n A 1 97 ARG 97 96 96 ARG ARG A . n A 1 98 GLY 98 97 97 GLY GLY A . n A 1 99 THR 99 98 98 THR THR A . n A 1 100 THR 100 99 99 THR THR A . n A 1 101 PRO 101 100 100 PRO PRO A . n A 1 102 THR 102 101 101 THR THR A . n A 1 103 VAL 103 102 102 VAL VAL A . n A 1 104 LEU 104 103 103 LEU LEU A . n A 1 105 GLU 105 104 104 GLU GLU A . n A 1 106 VAL 106 105 105 VAL VAL A . n A 1 107 LEU 107 106 106 LEU LEU A . n A 1 108 ASN 108 107 107 ASN ASN A . n A 1 109 THR 109 108 108 THR THR A . n A 1 110 ALA 110 109 109 ALA ALA A . n A 1 111 ASN 111 110 110 ASN ASN A . n A 1 112 PHE 112 111 111 PHE PHE A . n A 1 113 MET 113 112 112 MET MET A . n A 1 114 SER 114 113 113 SER SER A . n A 1 115 GLN 115 114 114 GLN GLN A . n A 1 116 TYR 116 115 115 TYR TYR A . n A 1 117 ASN 117 116 116 ASN ASN A . n A 1 118 PRO 118 117 117 PRO PRO A . n A 1 119 ILE 119 118 118 ILE ILE A . n A 1 120 THR 120 119 119 THR THR A . n A 1 121 LEU 121 120 120 LEU LEU A . n A 1 122 GLN 122 121 121 GLN GLN A . n A 1 123 GLN 123 122 122 GLN GLN A . n A 1 124 LYS 124 123 123 LYS LYS A . n A 1 125 ARG 125 124 124 ARG ARG A . n A 1 126 PHE 126 125 125 PHE PHE A . n A 1 127 THR 127 126 126 THR THR A . n A 1 128 ILE 128 127 127 ILE ILE A . n A 1 129 LEU 129 128 128 LEU LEU A . n A 1 130 LYS 130 129 129 LYS LYS A . n A 1 131 ASP 131 130 130 ASP ASP A . n A 1 132 VAL 132 131 131 VAL VAL A . n A 1 133 THR 133 132 132 THR THR A . n A 1 134 LEU 134 133 133 LEU LEU A . n A 1 135 ASN 135 134 134 ASN ASN A . n A 1 136 CYS 136 135 135 CYS CYS A . n A 1 137 SER 137 136 136 SER SER A . n A 1 138 LEU 138 137 137 LEU LEU A . n A 1 139 THR 139 138 138 THR THR A . n A 1 140 GLY 140 139 139 GLY GLY A . n A 1 141 GLU 141 140 140 GLU GLU A . n A 1 142 SER 142 141 141 SER SER A . n A 1 143 ILE 143 142 142 ILE ILE A . n A 1 144 LYS 144 143 143 LYS LYS A . n A 1 145 ASP 145 144 144 ASP ASP A . n A 1 146 ARG 146 145 145 ARG ARG A . n A 1 147 ILE 147 146 146 ILE ILE A . n A 1 148 ILE 148 147 147 ILE ILE A . n A 1 149 ASN 149 148 148 ASN ASN A . n A 1 150 LEU 150 149 149 LEU LEU A . n A 1 151 PRO 151 150 150 PRO PRO A . n A 1 152 GLY 152 151 151 GLY GLY A . n A 1 153 GLN 153 152 152 GLN GLN A . n A 1 154 LEU 154 153 153 LEU LEU A . n A 1 155 VAL 155 154 154 VAL VAL A . n A 1 156 ASN 156 155 155 ASN ASN A . n A 1 157 TYR 157 156 156 TYR TYR A . n A 1 158 ASN 158 157 157 ASN ASN A . n A 1 159 GLY 159 158 158 GLY GLY A . n A 1 160 ALA 160 159 159 ALA ALA A . n A 1 161 THR 161 160 160 THR THR A . n A 1 162 ALA 162 161 161 ALA ALA A . n A 1 163 VAL 163 162 162 VAL VAL A . n A 1 164 ALA 164 163 163 ALA ALA A . n A 1 165 ALA 165 164 164 ALA ALA A . n A 1 166 SER 166 165 165 SER SER A . n A 1 167 ASN 167 166 166 ASN ASN A . n A 1 168 GLY 168 167 167 GLY GLY A . n A 1 169 PRO 169 168 168 PRO PRO A . n A 1 170 GLY 170 169 169 GLY GLY A . n A 1 171 ALA 171 170 170 ALA ALA A . n A 1 172 ILE 172 171 171 ILE ILE A . n A 1 173 PHE 173 172 172 PHE PHE A . n A 1 174 MET 174 173 173 MET MET A . n A 1 175 LEU 175 174 174 LEU LEU A . n A 1 176 GLN 176 175 175 GLN GLN A . n A 1 177 ILE 177 176 176 ILE ILE A . n A 1 178 GLY 178 177 177 GLY GLY A . n A 1 179 ASP 179 178 178 ASP ASP A . n A 1 180 SER 180 179 179 SER SER A . n A 1 181 LEU 181 180 180 LEU LEU A . n A 1 182 VAL 182 181 181 VAL VAL A . n A 1 183 GLY 183 182 182 GLY GLY A . n A 1 184 LEU 184 183 183 LEU LEU A . n A 1 185 TRP 185 184 184 TRP TRP A . n A 1 186 ASP 186 185 185 ASP ASP A . n A 1 187 SER 187 186 186 SER SER A . n A 1 188 SER 188 187 187 SER SER A . n A 1 189 TYR 189 188 188 TYR TYR A . n A 1 190 GLU 190 189 189 GLU GLU A . n A 1 191 ALA 191 190 190 ALA ALA A . n A 1 192 VAL 192 191 191 VAL VAL A . n A 1 193 TYR 193 192 192 TYR TYR A . n A 1 194 THR 194 193 193 THR THR A . n A 1 195 ASP 195 194 194 ASP ASP A . n A 1 196 ALA 196 195 195 ALA ALA A . n B 2 1 A 1 196 196 A A B . n B 2 2 A 2 197 197 A A B . n B 2 3 A 3 198 198 A A B . n C 3 1 U 1 199 199 U U C . n C 3 2 U 2 200 200 U U C . n C 3 3 U 3 201 201 U U C . n C 3 4 U 4 202 202 U U C . n # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 FFT 'model building' . ? 2 MOSFLM 'data reduction' . ? 3 SCALA 'data scaling' . ? 4 CNS refinement . ? 5 # _cell.entry_id 3S4G _cell.length_a 313.146 _cell.length_b 302.121 _cell.length_c 183.385 _cell.angle_alpha 90.00 _cell.angle_beta 93.82 _cell.angle_gamma 90.00 _cell.Z_PDB 240 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3S4G _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3S4G _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.2 _exptl_crystal_grow.pdbx_details '0.4 % PEG 6000, pH 6.2-7.0, 1 mM MgCl2, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4r' _diffrn_detector.pdbx_collection_date 2007-01-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SAGITALLY FOCUSED Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.488 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX14.1' _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX14.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.488 # _reflns.entry_id 3S4G _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 140 _reflns.d_resolution_high 6 _reflns.number_obs 24647 _reflns.number_all ? _reflns.percent_possible_obs 99 _reflns.pdbx_Rmerge_I_obs 0.128 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 6 _reflns_shell.d_res_low 6.32 _reflns_shell.percent_possible_all 97 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3S4G _refine.ls_number_reflns_obs 24647 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 95.85 _refine.ls_d_res_high 6.0 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.38 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.43 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values NR _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details NR _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1427 _refine_hist.pdbx_number_atoms_nucleic_acid 147 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1574 _refine_hist.d_res_high 6.0 _refine_hist.d_res_low 95.85 # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 1 given ? 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000 0.00000 0.00000 2 generate ? -0.97320000 -0.22321000 -0.05534000 -0.22037000 0.83644000 0.50181000 -0.06572000 0.50055000 -0.86321000 148.87123 -6.96992 90.41208 3 generate ? -0.40356000 -0.24593000 -0.88128000 -0.91082000 0.01656000 0.41246000 -0.08684000 0.96915000 -0.23068000 144.47185 48.53883 62.77232 4 generate ? 0.32817000 0.55577000 0.76382000 0.87728000 0.12052000 -0.46461000 -0.35027000 0.82255000 -0.44801000 15.03239 -43.88661 92.34768 5 generate ? -0.03926000 -0.97833000 0.20329000 -0.42887000 -0.16726000 -0.88775000 0.90251000 -0.12204000 -0.41301000 67.63017 72.38328 -2.43241 6 generate ? -0.49578000 -0.62054000 -0.60756000 0.48057000 0.38669000 -0.78710000 0.72337000 -0.68220000 0.10650000 138.85167 0.57686 -13.04252 7 generate ? -0.94304000 0.02515000 0.33173000 0.02594000 -0.98854000 0.14868000 0.33166000 0.14882000 0.93158000 129.27132 -8.92447 -21.51191 8 generate ? -0.26687000 -0.89301000 0.36237000 0.66047000 -0.44329000 -0.60603000 0.70183000 0.07761000 0.70811000 77.38263 -21.30423 -38.88194 9 generate ? -0.99800000 0.04261000 0.04664000 0.03794000 -0.18600000 0.98182000 0.05051000 0.98162000 0.18402000 146.21280 -47.58636 33.56308 10 generate ? -0.30706000 -0.50537000 -0.80642000 -0.48688000 0.81149000 -0.32316000 0.81772000 0.29340000 -0.49523000 133.89391 50.45002 7.32154 11 generate ? 0.46554000 0.31715000 -0.82625000 -0.75726000 0.62594000 -0.18641000 0.45806000 0.71247000 0.53157000 77.29893 64.62584 -12.68185 12 generate ? 0.71807000 -0.38904000 0.57708000 0.36318000 -0.49786000 -0.78755000 0.59369000 0.77510000 -0.21621000 -5.35738 9.07461 11.34176 13 generate ? -0.67534000 0.40453000 -0.61666000 0.54414000 0.83771000 -0.04637000 0.49783000 -0.36686000 -0.78586000 152.51253 -38.39476 45.04448 14 generate ? -0.30612000 0.82832000 0.46923000 -0.04738000 -0.50554000 0.86150000 0.95081000 0.24150000 0.19400000 75.68676 -35.65438 -33.93148 15 generate ? -0.30082000 -0.04400000 0.95267000 0.82975000 -0.50452000 0.23871000 0.47013000 0.86228000 0.18828000 52.77769 -72.45176 2.30129 16 generate ? -0.46898000 0.60685000 -0.64171000 -0.25928000 0.59995000 0.75685000 0.84430000 0.52133000 -0.12402000 138.46211 -15.02369 -11.39559 17 generate ? 0.33008000 0.87681000 -0.34963000 0.55679000 0.11825000 0.82219000 0.76226000 -0.46606000 -0.44917000 65.67338 -78.99164 9.88116 18 generate ? 0.60142000 -0.71495000 -0.35657000 0.17885000 0.55547000 -0.81208000 0.77866000 0.42462000 0.46194000 45.95425 23.69934 -33.37909 19 generate ? 0.06404000 0.96411000 -0.25767000 0.96479000 -0.12582000 -0.23098000 -0.25511000 -0.23380000 -0.93822000 81.62112 -61.47903 107.48206 20 generate ? 0.95757000 -0.05914000 -0.28207000 0.28553000 0.32760000 0.90064000 0.03914000 -0.94296000 0.33058000 16.19232 -62.50926 27.73519 21 generate ? 0.35945000 0.29196000 0.88632000 0.06903000 0.93887000 -0.33727000 -0.93061000 0.18242000 0.31732000 7.13055 10.03797 100.45338 22 generate ? 0.60307000 0.17515000 0.77823000 -0.71294000 0.55596000 0.42735000 -0.35782000 -0.81254000 0.46015000 -6.02246 33.24167 51.33627 23 generate ? 0.07936000 0.99639000 0.03015000 0.10510000 0.02171000 -0.99422000 -0.99129000 0.08207000 -0.10300000 67.15411 37.52291 124.15989 24 generate ? 0.34410000 -0.83743000 -0.42462000 0.93236000 0.35819000 0.04913000 0.11095000 -0.41280000 0.90404000 68.35440 -71.56564 -3.43945 25 generate ? -0.48908000 -0.85309000 0.18178000 0.77402000 -0.32840000 0.54133000 -0.40211000 0.40546000 0.82092000 102.04567 -82.42929 38.22800 26 generate ? 0.89113000 0.18891000 -0.41255000 0.39923000 -0.75852000 0.51504000 -0.21564000 -0.62367000 -0.75136000 26.93027 -53.23392 96.04679 27 generate ? 0.54968000 0.59829000 0.58301000 0.59779000 -0.76921000 0.22576000 0.58353000 0.22443000 -0.78047000 6.83574 -54.73974 38.08333 28 generate ? 0.95898000 0.28137000 0.03440000 -0.06199000 0.32657000 -0.94314000 -0.27661000 0.90232000 0.33062000 1.67641 47.87468 51.01036 29 generate ? -0.55627000 0.75636000 0.34421000 0.75729000 0.29086000 0.58473000 0.34215000 0.58593000 -0.73458000 99.89864 -83.12364 54.37728 30 generate ? 0.35103000 0.92935000 0.11442000 -0.83480000 0.36596000 -0.41132000 -0.42413000 0.04887000 0.90428000 42.91896 80.62047 35.93227 31 generate ? 0.89041000 0.40068000 -0.21594000 0.19001000 -0.75832000 -0.62358000 -0.41361000 0.51421000 -0.75134000 18.10781 14.21761 110.87966 32 generate ? 0.71865000 0.36533000 0.59168000 -0.38479000 -0.49982000 0.77596000 0.57921000 -0.78531000 -0.21862000 -6.05806 -7.04824 12.63749 33 generate ? -0.04061000 -0.15298000 0.98739000 -0.15036000 -0.97602000 -0.15741000 0.98780000 -0.15486000 0.01664000 32.23494 18.24876 -28.53622 34 generate ? -0.48904000 0.77489000 -0.40049000 -0.85240000 -0.32711000 0.40794000 0.18510000 0.54087000 0.82048000 128.72354 44.43108 -5.66446 35 generate ? 0.65800000 -0.51112000 -0.55299000 -0.71050000 -0.17811000 -0.68079000 0.24947000 0.84085000 -0.48035000 50.65151 83.70034 49.14962 36 generate ? -0.47573000 -0.25685000 0.84126000 0.60538000 0.59825000 0.52499000 -0.63813000 0.75903000 -0.12912000 71.49503 -69.25034 99.24734 37 generate ? 0.50147000 0.85699000 -0.11869000 -0.55767000 0.42506000 0.71297000 0.66146000 -0.29135000 0.69108000 42.45128 8.84365 -35.04607 38 generate ? 0.24839000 0.50805000 -0.82473000 -0.70542000 -0.48862000 -0.51345000 -0.66384000 0.70932000 0.23702000 93.51123 75.68497 84.43878 39 generate ? 0.81416000 -0.48188000 0.32394000 -0.48234000 -0.87188000 -0.08469000 0.32325000 -0.08730000 -0.94228000 -0.88127 39.67362 64.86946 40 generate ? -0.26917000 0.66237000 0.69915000 -0.89360000 -0.44251000 0.07520000 0.35919000 -0.60452000 0.71101000 62.43854 62.85320 -13.55944 41 generate ? -0.88221000 -0.24975000 0.39915000 -0.25245000 -0.46469000 -0.84873000 0.39745000 -0.84952000 0.34690000 121.32668 57.44682 0.36035 42 generate ? 0.36097000 0.06466000 -0.93033000 0.29185000 0.93965000 0.17855000 0.88573000 -0.33596000 0.32031000 90.00611 -29.46930 -34.81621 43 generate ? -0.64798000 -0.19202000 -0.73705000 -0.19545000 -0.89337000 0.40458000 -0.73615000 0.40622000 0.54136000 156.03133 -4.08331 75.66092 44 generate ? -0.12273000 -0.98971000 -0.07362000 -0.98943000 0.11625000 0.08664000 -0.07719000 0.08348000 -0.99352000 86.47758 69.42669 97.08543 45 generate ? 0.43996000 -0.50703000 -0.74118000 -0.50717000 -0.82142000 0.26087000 -0.74109000 0.26113000 -0.61854000 75.34903 25.76724 129.10930 46 generate ? -0.03723000 -0.42550000 0.90419000 -0.98003000 -0.16131000 -0.11627000 0.19532000 -0.89047000 -0.41099000 35.38430 77.83802 50.34671 47 generate ? -0.40452000 -0.91038000 -0.08706000 -0.24782000 0.01748000 0.96865000 -0.88031000 0.41341000 -0.23268000 108.42786 -26.00991 121.76114 48 generate ? -0.70325000 0.67046000 -0.23647000 -0.42339000 -0.66216000 -0.61829000 -0.57112000 -0.33470000 0.74953000 137.15263 59.57811 53.99150 49 generate ? -0.81593000 0.44158000 -0.37317000 0.44150000 0.05918000 -0.89531000 -0.37327000 -0.89527000 -0.24325000 151.87914 7.81284 84.71953 50 generate ? 0.25009000 -0.70790000 -0.66056000 0.51061000 -0.48323000 0.71118000 -0.82264000 -0.51514000 0.24061000 85.77174 -70.96624 95.70348 51 generate ? -0.30953000 -0.49057000 0.81457000 -0.50940000 0.80890000 0.29359000 -0.80293000 -0.32407000 -0.50028000 60.02832 24.44744 128.33191 52 generate ? 0.65682000 -0.71177000 0.24892000 -0.51131000 -0.17779000 0.84081000 -0.55421000 -0.67954000 -0.48071000 14.19488 -0.47872 108.91917 53 generate ? -0.49368000 0.48458000 0.72212000 -0.61792000 0.38883000 -0.68336000 -0.61193000 -0.78358000 0.10748000 77.82272 77.13026 86.27694 54 generate ? 0.50125000 -0.55672000 0.66243000 0.85703000 0.42503000 -0.29130000 -0.11938000 0.71373000 0.69017000 6.74827 -50.33623 23.11616 55 generate ? 0.01297000 0.37741000 -0.92595000 0.37686000 -0.85959000 -0.34508000 -0.92618000 -0.34447000 -0.15338000 115.52331 -12.34954 121.61179 56 generate ? 0.46145000 -0.76201000 0.45431000 0.31809000 0.62016000 0.71709000 -0.82818000 -0.18639000 0.52856000 19.55496 -56.69216 83.16889 57 generate ? -0.67318000 0.54353000 0.50140000 0.40257000 0.83813000 -0.36806000 -0.62029000 -0.04592000 -0.78302000 101.40125 -13.19423 127.57780 58 generate ? -0.90132000 -0.40445000 0.15504000 -0.40566000 0.66272000 -0.62948000 0.15184000 -0.63025000 -0.76140000 134.00621 58.76748 69.37045 59 generate ? 0.08600000 0.10815000 -0.99041000 0.99597000 0.01599000 0.08823000 0.02538000 -0.99401000 -0.10634000 112.75107 -78.36338 49.22248 60 generate ? -0.70632000 -0.42074000 -0.56929000 0.66670000 -0.66571000 -0.33517000 -0.23796000 -0.61628000 0.75071000 152.70837 -34.14207 29.12600 # _database_PDB_matrix.entry_id 3S4G _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3S4G _struct.title 'Low Resolution Structure of STNV complexed with RNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3S4G _struct_keywords.pdbx_keywords VIRUS _struct_keywords.text 'Protein-RNA complex, Low resolution structure, jelly-roll -sandwich, Virus Capsid Protein, VIRUS' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP CAPSD_STNV1 P03606 ? 1 ;MAKQQNNRRKSATMRAVKRMINTHLEHKRFALINSGNTNATAGTVQNLSNGIIQGDDINQRSGDQVRIVSHKLHVRGTAI TVSQTFRFIWFRDNMNRGTTPTVLEVLNTANFMSQYNPITLQQKRFTILKDVTLNCSLTGESIKDRIINLPGQLVNYNGA TAVAASNGPGAIFMLQIGDSLVGLWDSSYEAVYTDA ; 1 2 PDB 3S4G 3S4G ? 2 ? 1 3 PDB 3S4G 3S4G ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3S4G A 1 ? 196 ? P03606 1 ? 196 ? 0 195 2 2 3S4G B 1 ? 3 ? 3S4G 196 ? 198 ? 196 198 3 3 3S4G C 1 ? 4 ? 3S4G 199 ? 202 ? 199 202 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete icosahedral assembly' ? 180-MERIC 180 2 'icosahedral asymmetric unit' ? trimeric 3 3 'icosahedral pentamer' ? pentadecameric 15 4 'icosahedral 23 hexamer' ? octadecameric 18 5 'icosahedral asymmetric unit, std point frame' ? trimeric 3 6 'crystal asymmetric unit, crystal frame' ? 180-meric 180 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-60)' A,B,C 2 1 A,B,C 3 '(1-5)' A,B,C 4 '(1,2,6,10,23,24)' A,B,C 5 P A,B,C 6 '(X0)(1-60)' A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? -0.22233344 0.91155546 -0.34588218 32.42302 -0.41982337 0.23067744 0.87780194 -8.95735 0.87995237 0.34037415 0.33140498 -80.48441 X0 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'point symmetry operation' ? ? 0.50151922 -0.55718398 0.66183419 6.69087 0.85684249 0.42563283 -0.29095985 -50.38094 -0.11958019 0.71300962 0.69088195 23.09077 3 'point symmetry operation' ? ? -0.30503964 -0.04470012 0.95129002 53.40018 0.82921630 -0.50371278 0.24222668 -72.81019 0.46834938 0.86271394 0.19071843 2.32158 4 'point symmetry operation' ? ? -0.30503964 0.82921630 0.46834938 75.57726 -0.04470011 -0.50371277 0.86271393 -36.29129 0.95129003 0.24222668 0.19071843 -33.60526 5 'point symmetry operation' ? ? 0.50151921 0.85684250 -0.11958019 42.57413 -0.55718397 0.42563283 0.71300961 8.70788 0.66183420 -0.29095986 0.69088195 -35.04007 6 'point symmetry operation' ? ? 0.54863235 0.59902608 0.58324120 6.89643 0.59902608 -0.76829088 0.22560338 -54.97824 0.58324119 0.22560338 -0.78034148 38.15465 7 'point symmetry operation' ? ? 0.71867657 0.36513259 0.59176192 -6.14475 -0.38485887 -0.49992017 0.77586304 -7.05367 0.57912661 -0.78533943 -0.21875640 12.67224 8 'point symmetry operation' ? ? 0.60252823 0.17690929 0.77824343 -6.06766 -0.71414482 0.55485257 0.42677371 33.47302 -0.35631014 -0.81292173 0.46065318 51.06198 9 'point symmetry operation' ? ? 0.36070038 0.29447438 0.88497462 7.02116 0.06623023 0.93836728 -0.33923503 10.59531 -0.93032725 0.18097428 0.31896633 100.27056 10 'point symmetry operation' ? ? 0.32739090 0.55535691 0.76445661 15.03341 0.87781448 0.12061965 -0.46356513 -44.07057 -0.34965260 0.82281809 -0.44801056 92.29339 11 'point symmetry operation' ? ? -0.64749667 -0.19368756 -0.73704355 156.06234 -0.19368756 -0.89357584 0.40497820 -4.32114 -0.73704355 0.40497821 0.54107251 75.77496 12 'point symmetry operation' ? ? -0.40255595 -0.24718416 -0.88139021 144.46928 -0.91121915 0.01633775 0.41159778 48.75338 -0.08734052 0.96883078 -0.23181579 62.93410 13 'point symmetry operation' ? ? -0.30829062 -0.50935167 -0.80344121 133.87722 -0.49221398 0.80814377 -0.32346414 51.33753 0.81405301 0.29574403 -0.49985315 8.18630 14 'point symmetry operation' ? ? -0.49497217 -0.61788351 -0.61091941 138.92402 0.48427705 0.38759321 -0.78437697 -0.13989 0.72144181 -0.68409903 0.10737896 -12.80884 15 'point symmetry operation' ? ? -0.70461304 -0.42279236 -0.56988340 152.63518 0.66877653 -0.66412735 -0.33417484 -34.53884 -0.23718858 -0.61658859 0.75070639 28.96325 16 'point symmetry operation' ? ? -0.90113568 -0.40533852 0.15380235 134.12389 -0.40533852 0.66186671 -0.63058158 58.92214 0.15380235 -0.63058159 -0.76073103 69.07143 17 'point symmetry operation' ? ? -0.81763984 0.43923554 -0.37220590 152.06726 0.43923553 0.05794960 -0.89650096 8.30399 -0.37220590 -0.89650098 -0.24030975 84.30392 18 'point symmetry operation' ? ? 0.01080203 0.37714249 -0.92609225 115.87292 0.37714249 -0.85928356 -0.34553625 -12.37760 -0.92609225 -0.34553625 -0.15151847 121.43117 19 'point symmetry operation' ? ? 0.43931143 -0.50580718 -0.74240458 75.56021 -0.50580717 -0.82224771 0.26089806 25.45863 -0.74240459 0.26089807 -0.61706371 129.14457 20 'point symmetry operation' ? ? -0.12429708 -0.98940704 -0.07499302 86.83993 -0.98940703 0.11787486 0.08473036 69.52429 -0.07499302 0.08473036 -0.99357778 96.78447 21 'point symmetry operation' ? ? -0.47172663 -0.25538368 0.84395092 70.67106 0.60794106 0.59906183 0.52108789 -69.02990 -0.63865613 0.75888346 -0.12733520 99.08086 22 'point symmetry operation' ? ? -0.55632338 0.75588397 0.34517204 99.86875 0.75588396 0.28778605 0.58806345 -83.11123 0.34517204 0.58806345 -0.73146267 53.63417 23 'point symmetry operation' ? ? 0.32739090 0.87781448 -0.34965259 66.03461 0.55535690 0.12061966 0.82281809 -78.97380 0.76445661 -0.46356514 -0.44801056 9.42644 24 'point symmetry operation' ? ? 0.95815310 -0.05809596 -0.28029895 15.92627 0.28348146 0.32858093 0.90092887 -62.33541 0.03976056 -0.94268735 0.33129996 27.55125 25 'point symmetry operation' ? ? 0.46427130 -0.75845095 0.45738859 18.79175 0.31598026 0.62427445 0.71444935 -56.18974 -0.82741081 -0.18717257 0.52948823 82.96073 26 'point symmetry operation' ? ? 0.08044096 0.10403057 -0.99131573 113.65902 0.99630972 0.02147800 0.08310014 -77.89072 0.02993643 -0.99434217 -0.10191896 48.09590 27 'point symmetry operation' ? ? 0.24802223 -0.70735924 -0.66191229 86.06584 0.50813460 -0.48673487 0.71055499 -70.38778 -0.82479343 -0.51257397 0.23871264 96.03871 28 'point symmetry operation' ? ? -0.40255594 -0.91121916 -0.08734052 108.07868 -0.24718415 0.01633775 0.96883077 -26.05850 -0.88139021 0.41159779 -0.23181580 121.85615 29 'point symmetry operation' ? ? -0.97221664 -0.22582169 -0.06163908 149.27655 -0.22582169 0.83546659 0.50099914 -6.16443 -0.06163908 0.50099914 -0.86324996 89.86939 30 'point symmetry operation' ? ? -0.67370813 0.40163715 -0.62032649 152.72539 0.54269978 0.83864344 -0.04641249 -38.19851 0.50159176 -0.36791954 -0.78296930 44.28305 31 'point symmetry operation' ? ? -0.26712251 0.66135401 0.70089689 62.10619 -0.89373510 -0.44202855 0.07647428 62.74358 0.36039302 -0.60598815 0.70915106 -13.51737 32 'point symmetry operation' ? ? 0.34889576 0.93007658 0.11501873 43.18352 -0.83611898 0.36435992 -0.41005718 80.79939 -0.42329279 0.04689787 0.90477832 35.79908 33 'point symmetry operation' ? ? 0.95815310 0.28348146 0.03976056 1.31568 -0.05809596 0.32858093 -0.94268734 47.37969 -0.28029895 0.90092888 0.33129996 51.49616 34 'point symmetry operation' ? ? 0.71867658 -0.38485888 0.57912661 -5.63741 0.36513259 -0.49992018 -0.78533942 8.66938 0.59176192 0.77586305 -0.21875640 11.88104 35 'point symmetry operation' ? ? -0.03858540 -0.15132080 0.98773133 31.93319 -0.15132080 -0.97618303 -0.15546289 18.16479 0.98773133 -0.15546289 0.01476842 -28.29952 36 'point symmetry operation' ? ? 0.65840818 -0.51000090 -0.55353207 50.64639 -0.71051567 -0.17851128 -0.68066232 83.79980 0.24832668 0.84144686 -0.47989691 49.34164 37 'point symmetry operation' ? ? -0.04059461 -0.97860130 0.20172152 67.96455 -0.42789958 -0.16541110 -0.88856126 72.32238 0.90291419 -0.12238735 -0.41202828 -2.47092 38 'point symmetry operation' ? ? -0.88298805 -0.25007679 0.39723255 121.65370 -0.25007679 -0.46553833 -0.84896151 57.27536 0.39723255 -0.84896152 0.34852639 0.22230 39 'point symmetry operation' ? ? -0.70461304 0.66877653 -0.23718858 137.51725 -0.42279236 -0.66412735 -0.61658859 59.45321 -0.56988340 -0.33417484 0.75070639 53.69935 40 'point symmetry operation' ? ? 0.24802223 0.50813460 -0.82479343 93.63232 -0.70735924 -0.48673487 -0.51257397 75.84622 -0.66191229 0.71055500 0.23871264 84.05677 41 'point symmetry operation' ? ? -0.47172664 0.60794106 -0.63865613 138.58213 -0.25538368 0.59906183 0.75888345 -15.78941 0.84395092 0.52108789 -0.12733519 -11.05578 42 'point symmetry operation' ? ? 0.36070038 0.06623023 -0.93032725 90.05017 0.29447438 0.93836728 0.18097428 -30.15624 0.88497462 -0.33923503 0.31896633 -34.60218 43 'point symmetry operation' ? ? 0.34889576 -0.83611899 -0.42329280 67.64485 0.93007658 0.36435992 0.04689787 -71.28294 0.11501873 -0.41005718 0.90477832 -4.22477 44 'point symmetry operation' ? ? -0.49082692 -0.85209065 0.18174285 102.32956 0.77304228 -0.32970159 0.54194326 -82.33381 -0.40186388 0.40649526 0.82052851 38.09590 45 'point symmetry operation' ? ? -0.99799945 0.04038754 0.04864099 146.17122 0.04038754 -0.18464783 0.98197455 -48.03692 0.04864099 0.98197456 0.18264728 33.87411 46 'point symmetry operation' ? ? -0.26712251 -0.89373511 0.36039301 77.53767 0.66135400 -0.44202856 -0.60598815 -21.53108 0.70089689 0.07647429 0.70915107 -38.74245 47 'point symmetry operation' ? ? -0.94285315 0.02539707 0.33223925 129.09936 0.02539707 -0.98871310 0.14765298 -8.82897 0.33223926 0.14765299 0.93156625 -21.53084 48 'point symmetry operation' ? ? -0.49082692 0.77304228 -0.40186388 129.18299 -0.85209064 -0.32970159 0.40649524 44.56267 0.18174286 0.54194326 0.82052851 -5.23619 49 'point symmetry operation' ? ? 0.46427130 0.31598025 -0.82741080 77.67298 -0.75845094 0.62427445 -0.18717257 64.85841 0.45738859 0.71444936 0.52948824 -12.37714 50 'point symmetry operation' ? ? 0.60252823 -0.71414482 -0.35631014 45.75442 0.17690929 0.55485257 -0.81292172 24.01023 0.77824343 0.42677371 0.46065319 -33.08515 51 'point symmetry operation' ? ? 0.65840819 -0.71051568 0.24832668 13.94223 -0.51000089 -0.17851127 0.84144685 -0.72945 -0.55353207 -0.68066233 -0.47989691 108.75267 52 'point symmetry operation' ? ? -0.30829061 -0.49221397 0.81405300 59.87806 -0.50935166 0.80814377 0.29574403 24.28143 -0.80344121 -0.32346415 -0.49985315 128.26028 53 'point symmetry operation' ? ? -0.67370813 0.54269979 0.50159176 101.41064 0.40163714 0.83864344 -0.36791953 -13.01266 -0.62032649 -0.04641250 -0.78296930 127.63899 54 'point symmetry operation' ? ? 0.06715023 0.96400997 -0.25724623 81.14337 0.96400997 -0.12916177 -0.23238334 -61.07255 -0.25724624 -0.23238335 -0.93798846 107.74741 55 'point symmetry operation' ? ? 0.89044339 0.18948022 -0.41377266 27.08492 0.40058668 -0.75779795 0.51504619 -53.48111 -0.21596502 -0.62437130 -0.75067943 96.07502 56 'point symmetry operation' ? ? 0.08044096 0.99630972 0.02993644 67.02062 0.10403057 0.02147800 -0.99434216 37.67271 -0.99131574 0.08310014 -0.10191896 124.04659 57 'point symmetry operation' ? ? 0.89044339 0.40058668 -0.21596501 18.05508 0.18948022 -0.75779795 -0.62437129 14.32655 -0.41377267 0.51504619 -0.75067942 110.87378 58 'point symmetry operation' ? ? 0.81563929 -0.47962308 0.32356491 -1.15582 -0.47962307 -0.87330176 -0.08547358 39.35569 0.32356491 -0.08547358 -0.94233753 64.82300 59 'point symmetry operation' ? ? -0.04059461 -0.42789957 0.90291419 35.93674 -0.97860130 -0.16541109 -0.12238735 78.17071 0.20172152 -0.88856127 -0.41202829 49.53487 60 'point symmetry operation' ? ? -0.49497216 0.48427706 0.72144181 78.07210 -0.61788351 0.38759321 -0.68409902 77.13057 -0.61091941 -0.78437698 0.10737895 86.13706 # _struct_biol.id 1 _struct_biol.details ;The biological assembly is 60 capsid subunits generated from a monomer using the matrices provided. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 15 ? HIS A 24 ? ARG A 14 HIS A 23 1 ? 10 HELX_P HELX_P2 2 THR A 102 ? LEU A 107 ? THR A 101 LEU A 106 1 ? 6 HELX_P HELX_P3 3 ASN A 117 ? GLN A 123 ? ASN A 116 GLN A 122 1 ? 7 HELX_P HELX_P4 4 VAL A 163 ? ASN A 167 ? VAL A 162 ASN A 166 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B A 1 N1 ? ? ? 1_555 C U 3 N3 ? ? B A 196 C U 201 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B A 1 N6 ? ? ? 1_555 C U 3 O4 ? ? B A 196 C U 201 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B A 3 N1 ? ? ? 1_555 C U 1 N3 ? ? B A 198 C U 199 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B A 3 N6 ? ? ? 1_555 C U 1 O4 ? ? B A 198 C U 199 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 27 ? THR A 38 ? HIS A 26 THR A 37 A 2 LEU A 184 ? THR A 194 ? LEU A 183 THR A 193 A 3 GLN A 65 ? THR A 78 ? GLN A 64 THR A 77 A 4 ILE A 143 ? PRO A 151 ? ILE A 142 PRO A 150 B 1 HIS A 27 ? THR A 38 ? HIS A 26 THR A 37 B 2 LEU A 184 ? THR A 194 ? LEU A 183 THR A 193 B 3 GLN A 65 ? THR A 78 ? GLN A 64 THR A 77 B 4 LEU A 154 ? ASN A 156 ? LEU A 153 ASN A 155 C 1 THR A 44 ? ASN A 47 ? THR A 43 ASN A 46 C 2 ILE A 172 ? GLY A 178 ? ILE A 171 GLY A 177 C 3 GLN A 84 ? ASP A 93 ? GLN A 83 ASP A 92 C 4 PHE A 126 ? CYS A 136 ? PHE A 125 CYS A 135 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASN A 34 ? N ASN A 33 O SER A 187 ? O SER A 186 A 2 3 O VAL A 192 ? O VAL A 191 N SER A 70 ? N SER A 69 A 3 4 N LEU A 73 ? N LEU A 72 O ILE A 148 ? O ILE A 147 B 1 2 N ASN A 34 ? N ASN A 33 O SER A 187 ? O SER A 186 B 2 3 O VAL A 192 ? O VAL A 191 N SER A 70 ? N SER A 69 B 3 4 N VAL A 66 ? N VAL A 65 O VAL A 155 ? O VAL A 154 C 1 2 N GLN A 46 ? N GLN A 45 O MET A 174 ? O MET A 173 C 2 3 O LEU A 175 ? O LEU A 174 N ILE A 89 ? N ILE A 88 C 3 4 N PHE A 86 ? N PHE A 85 O LEU A 134 ? O LEU A 133 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NH2 A ARG 18 ? ? "O5'" C U 201 ? ? 2.06 2 1 NH1 A ARG 18 ? ? OP2 C U 201 ? ? 2.09 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 A _pdbx_validate_rmsd_bond.auth_seq_id_1 196 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 A _pdbx_validate_rmsd_bond.auth_seq_id_2 196 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.512 _pdbx_validate_rmsd_bond.bond_target_value 1.427 _pdbx_validate_rmsd_bond.bond_deviation 0.085 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O3'" B A 196 ? ? P B A 197 ? ? OP2 B A 197 ? ? 89.55 105.20 -15.65 2.20 Y 2 1 "O3'" B A 196 ? ? P B A 197 ? ? OP1 B A 197 ? ? 121.83 110.50 11.33 1.10 Y 3 1 "O5'" C U 201 ? ? P C U 201 ? ? OP2 C U 201 ? ? 100.15 105.70 -5.55 0.90 N 4 1 "O5'" C U 202 ? ? P C U 202 ? ? OP2 C U 202 ? ? 97.49 105.70 -8.21 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 14 ? ? 69.09 -27.85 2 1 LEU A 47 ? ? -121.78 -50.36 3 1 THR A 80 ? ? 71.95 -51.17 4 1 ASP A 194 ? ? -143.42 48.45 # _pdbx_point_symmetry.entry_id 3S4G _pdbx_point_symmetry.Schoenflies_symbol I _pdbx_point_symmetry.circular_symmetry ? _pdbx_point_symmetry.H-M_notation ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 0 ? A MET 1 2 1 Y 1 A ALA 1 ? A ALA 2 3 1 Y 1 A LYS 2 ? A LYS 3 4 1 Y 1 A GLN 3 ? A GLN 4 5 1 Y 1 A GLN 4 ? A GLN 5 6 1 Y 1 A ASN 5 ? A ASN 6 7 1 Y 1 A ASN 6 ? A ASN 7 8 1 Y 1 A ARG 7 ? A ARG 8 9 1 Y 1 A ARG 8 ? A ARG 9 10 1 Y 1 A LYS 9 ? A LYS 10 11 1 Y 1 A SER 10 ? A SER 11 12 1 Y 1 A ALA 11 ? A ALA 12 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 CYS N N N N 111 CYS CA C N R 112 CYS C C N N 113 CYS O O N N 114 CYS CB C N N 115 CYS SG S N N 116 CYS OXT O N N 117 CYS H H N N 118 CYS H2 H N N 119 CYS HA H N N 120 CYS HB2 H N N 121 CYS HB3 H N N 122 CYS HG H N N 123 CYS HXT H N N 124 GLN N N N N 125 GLN CA C N S 126 GLN C C N N 127 GLN O O N N 128 GLN CB C N N 129 GLN CG C N N 130 GLN CD C N N 131 GLN OE1 O N N 132 GLN NE2 N N N 133 GLN OXT O N N 134 GLN H H N N 135 GLN H2 H N N 136 GLN HA H N N 137 GLN HB2 H N N 138 GLN HB3 H N N 139 GLN HG2 H N N 140 GLN HG3 H N N 141 GLN HE21 H N N 142 GLN HE22 H N N 143 GLN HXT H N N 144 GLU N N N N 145 GLU CA C N S 146 GLU C C N N 147 GLU O O N N 148 GLU CB C N N 149 GLU CG C N N 150 GLU CD C N N 151 GLU OE1 O N N 152 GLU OE2 O N N 153 GLU OXT O N N 154 GLU H H N N 155 GLU H2 H N N 156 GLU HA H N N 157 GLU HB2 H N N 158 GLU HB3 H N N 159 GLU HG2 H N N 160 GLU HG3 H N N 161 GLU HE2 H N N 162 GLU HXT H N N 163 GLY N N N N 164 GLY CA C N N 165 GLY C C N N 166 GLY O O N N 167 GLY OXT O N N 168 GLY H H N N 169 GLY H2 H N N 170 GLY HA2 H N N 171 GLY HA3 H N N 172 GLY HXT H N N 173 HIS N N N N 174 HIS CA C N S 175 HIS C C N N 176 HIS O O N N 177 HIS CB C N N 178 HIS CG C Y N 179 HIS ND1 N Y N 180 HIS CD2 C Y N 181 HIS CE1 C Y N 182 HIS NE2 N Y N 183 HIS OXT O N N 184 HIS H H N N 185 HIS H2 H N N 186 HIS HA H N N 187 HIS HB2 H N N 188 HIS HB3 H N N 189 HIS HD1 H N N 190 HIS HD2 H N N 191 HIS HE1 H N N 192 HIS HE2 H N N 193 HIS HXT H N N 194 ILE N N N N 195 ILE CA C N S 196 ILE C C N N 197 ILE O O N N 198 ILE CB C N S 199 ILE CG1 C N N 200 ILE CG2 C N N 201 ILE CD1 C N N 202 ILE OXT O N N 203 ILE H H N N 204 ILE H2 H N N 205 ILE HA H N N 206 ILE HB H N N 207 ILE HG12 H N N 208 ILE HG13 H N N 209 ILE HG21 H N N 210 ILE HG22 H N N 211 ILE HG23 H N N 212 ILE HD11 H N N 213 ILE HD12 H N N 214 ILE HD13 H N N 215 ILE HXT H N N 216 LEU N N N N 217 LEU CA C N S 218 LEU C C N N 219 LEU O O N N 220 LEU CB C N N 221 LEU CG C N N 222 LEU CD1 C N N 223 LEU CD2 C N N 224 LEU OXT O N N 225 LEU H H N N 226 LEU H2 H N N 227 LEU HA H N N 228 LEU HB2 H N N 229 LEU HB3 H N N 230 LEU HG H N N 231 LEU HD11 H N N 232 LEU HD12 H N N 233 LEU HD13 H N N 234 LEU HD21 H N N 235 LEU HD22 H N N 236 LEU HD23 H N N 237 LEU HXT H N N 238 LYS N N N N 239 LYS CA C N S 240 LYS C C N N 241 LYS O O N N 242 LYS CB C N N 243 LYS CG C N N 244 LYS CD C N N 245 LYS CE C N N 246 LYS NZ N N N 247 LYS OXT O N N 248 LYS H H N N 249 LYS H2 H N N 250 LYS HA H N N 251 LYS HB2 H N N 252 LYS HB3 H N N 253 LYS HG2 H N N 254 LYS HG3 H N N 255 LYS HD2 H N N 256 LYS HD3 H N N 257 LYS HE2 H N N 258 LYS HE3 H N N 259 LYS HZ1 H N N 260 LYS HZ2 H N N 261 LYS HZ3 H N N 262 LYS HXT H N N 263 MET N N N N 264 MET CA C N S 265 MET C C N N 266 MET O O N N 267 MET CB C N N 268 MET CG C N N 269 MET SD S N N 270 MET CE C N N 271 MET OXT O N N 272 MET H H N N 273 MET H2 H N N 274 MET HA H N N 275 MET HB2 H N N 276 MET HB3 H N N 277 MET HG2 H N N 278 MET HG3 H N N 279 MET HE1 H N N 280 MET HE2 H N N 281 MET HE3 H N N 282 MET HXT H N N 283 PHE N N N N 284 PHE CA C N S 285 PHE C C N N 286 PHE O O N N 287 PHE CB C N N 288 PHE CG C Y N 289 PHE CD1 C Y N 290 PHE CD2 C Y N 291 PHE CE1 C Y N 292 PHE CE2 C Y N 293 PHE CZ C Y N 294 PHE OXT O N N 295 PHE H H N N 296 PHE H2 H N N 297 PHE HA H N N 298 PHE HB2 H N N 299 PHE HB3 H N N 300 PHE HD1 H N N 301 PHE HD2 H N N 302 PHE HE1 H N N 303 PHE HE2 H N N 304 PHE HZ H N N 305 PHE HXT H N N 306 PRO N N N N 307 PRO CA C N S 308 PRO C C N N 309 PRO O O N N 310 PRO CB C N N 311 PRO CG C N N 312 PRO CD C N N 313 PRO OXT O N N 314 PRO H H N N 315 PRO HA H N N 316 PRO HB2 H N N 317 PRO HB3 H N N 318 PRO HG2 H N N 319 PRO HG3 H N N 320 PRO HD2 H N N 321 PRO HD3 H N N 322 PRO HXT H N N 323 SER N N N N 324 SER CA C N S 325 SER C C N N 326 SER O O N N 327 SER CB C N N 328 SER OG O N N 329 SER OXT O N N 330 SER H H N N 331 SER H2 H N N 332 SER HA H N N 333 SER HB2 H N N 334 SER HB3 H N N 335 SER HG H N N 336 SER HXT H N N 337 THR N N N N 338 THR CA C N S 339 THR C C N N 340 THR O O N N 341 THR CB C N R 342 THR OG1 O N N 343 THR CG2 C N N 344 THR OXT O N N 345 THR H H N N 346 THR H2 H N N 347 THR HA H N N 348 THR HB H N N 349 THR HG1 H N N 350 THR HG21 H N N 351 THR HG22 H N N 352 THR HG23 H N N 353 THR HXT H N N 354 TRP N N N N 355 TRP CA C N S 356 TRP C C N N 357 TRP O O N N 358 TRP CB C N N 359 TRP CG C Y N 360 TRP CD1 C Y N 361 TRP CD2 C Y N 362 TRP NE1 N Y N 363 TRP CE2 C Y N 364 TRP CE3 C Y N 365 TRP CZ2 C Y N 366 TRP CZ3 C Y N 367 TRP CH2 C Y N 368 TRP OXT O N N 369 TRP H H N N 370 TRP H2 H N N 371 TRP HA H N N 372 TRP HB2 H N N 373 TRP HB3 H N N 374 TRP HD1 H N N 375 TRP HE1 H N N 376 TRP HE3 H N N 377 TRP HZ2 H N N 378 TRP HZ3 H N N 379 TRP HH2 H N N 380 TRP HXT H N N 381 TYR N N N N 382 TYR CA C N S 383 TYR C C N N 384 TYR O O N N 385 TYR CB C N N 386 TYR CG C Y N 387 TYR CD1 C Y N 388 TYR CD2 C Y N 389 TYR CE1 C Y N 390 TYR CE2 C Y N 391 TYR CZ C Y N 392 TYR OH O N N 393 TYR OXT O N N 394 TYR H H N N 395 TYR H2 H N N 396 TYR HA H N N 397 TYR HB2 H N N 398 TYR HB3 H N N 399 TYR HD1 H N N 400 TYR HD2 H N N 401 TYR HE1 H N N 402 TYR HE2 H N N 403 TYR HH H N N 404 TYR HXT H N N 405 U OP3 O N N 406 U P P N N 407 U OP1 O N N 408 U OP2 O N N 409 U "O5'" O N N 410 U "C5'" C N N 411 U "C4'" C N R 412 U "O4'" O N N 413 U "C3'" C N S 414 U "O3'" O N N 415 U "C2'" C N R 416 U "O2'" O N N 417 U "C1'" C N R 418 U N1 N N N 419 U C2 C N N 420 U O2 O N N 421 U N3 N N N 422 U C4 C N N 423 U O4 O N N 424 U C5 C N N 425 U C6 C N N 426 U HOP3 H N N 427 U HOP2 H N N 428 U "H5'" H N N 429 U "H5''" H N N 430 U "H4'" H N N 431 U "H3'" H N N 432 U "HO3'" H N N 433 U "H2'" H N N 434 U "HO2'" H N N 435 U "H1'" H N N 436 U H3 H N N 437 U H5 H N N 438 U H6 H N N 439 VAL N N N N 440 VAL CA C N S 441 VAL C C N N 442 VAL O O N N 443 VAL CB C N N 444 VAL CG1 C N N 445 VAL CG2 C N N 446 VAL OXT O N N 447 VAL H H N N 448 VAL H2 H N N 449 VAL HA H N N 450 VAL HB H N N 451 VAL HG11 H N N 452 VAL HG12 H N N 453 VAL HG13 H N N 454 VAL HG21 H N N 455 VAL HG22 H N N 456 VAL HG23 H N N 457 VAL HXT H N N 458 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 CYS N CA sing N N 109 CYS N H sing N N 110 CYS N H2 sing N N 111 CYS CA C sing N N 112 CYS CA CB sing N N 113 CYS CA HA sing N N 114 CYS C O doub N N 115 CYS C OXT sing N N 116 CYS CB SG sing N N 117 CYS CB HB2 sing N N 118 CYS CB HB3 sing N N 119 CYS SG HG sing N N 120 CYS OXT HXT sing N N 121 GLN N CA sing N N 122 GLN N H sing N N 123 GLN N H2 sing N N 124 GLN CA C sing N N 125 GLN CA CB sing N N 126 GLN CA HA sing N N 127 GLN C O doub N N 128 GLN C OXT sing N N 129 GLN CB CG sing N N 130 GLN CB HB2 sing N N 131 GLN CB HB3 sing N N 132 GLN CG CD sing N N 133 GLN CG HG2 sing N N 134 GLN CG HG3 sing N N 135 GLN CD OE1 doub N N 136 GLN CD NE2 sing N N 137 GLN NE2 HE21 sing N N 138 GLN NE2 HE22 sing N N 139 GLN OXT HXT sing N N 140 GLU N CA sing N N 141 GLU N H sing N N 142 GLU N H2 sing N N 143 GLU CA C sing N N 144 GLU CA CB sing N N 145 GLU CA HA sing N N 146 GLU C O doub N N 147 GLU C OXT sing N N 148 GLU CB CG sing N N 149 GLU CB HB2 sing N N 150 GLU CB HB3 sing N N 151 GLU CG CD sing N N 152 GLU CG HG2 sing N N 153 GLU CG HG3 sing N N 154 GLU CD OE1 doub N N 155 GLU CD OE2 sing N N 156 GLU OE2 HE2 sing N N 157 GLU OXT HXT sing N N 158 GLY N CA sing N N 159 GLY N H sing N N 160 GLY N H2 sing N N 161 GLY CA C sing N N 162 GLY CA HA2 sing N N 163 GLY CA HA3 sing N N 164 GLY C O doub N N 165 GLY C OXT sing N N 166 GLY OXT HXT sing N N 167 HIS N CA sing N N 168 HIS N H sing N N 169 HIS N H2 sing N N 170 HIS CA C sing N N 171 HIS CA CB sing N N 172 HIS CA HA sing N N 173 HIS C O doub N N 174 HIS C OXT sing N N 175 HIS CB CG sing N N 176 HIS CB HB2 sing N N 177 HIS CB HB3 sing N N 178 HIS CG ND1 sing Y N 179 HIS CG CD2 doub Y N 180 HIS ND1 CE1 doub Y N 181 HIS ND1 HD1 sing N N 182 HIS CD2 NE2 sing Y N 183 HIS CD2 HD2 sing N N 184 HIS CE1 NE2 sing Y N 185 HIS CE1 HE1 sing N N 186 HIS NE2 HE2 sing N N 187 HIS OXT HXT sing N N 188 ILE N CA sing N N 189 ILE N H sing N N 190 ILE N H2 sing N N 191 ILE CA C sing N N 192 ILE CA CB sing N N 193 ILE CA HA sing N N 194 ILE C O doub N N 195 ILE C OXT sing N N 196 ILE CB CG1 sing N N 197 ILE CB CG2 sing N N 198 ILE CB HB sing N N 199 ILE CG1 CD1 sing N N 200 ILE CG1 HG12 sing N N 201 ILE CG1 HG13 sing N N 202 ILE CG2 HG21 sing N N 203 ILE CG2 HG22 sing N N 204 ILE CG2 HG23 sing N N 205 ILE CD1 HD11 sing N N 206 ILE CD1 HD12 sing N N 207 ILE CD1 HD13 sing N N 208 ILE OXT HXT sing N N 209 LEU N CA sing N N 210 LEU N H sing N N 211 LEU N H2 sing N N 212 LEU CA C sing N N 213 LEU CA CB sing N N 214 LEU CA HA sing N N 215 LEU C O doub N N 216 LEU C OXT sing N N 217 LEU CB CG sing N N 218 LEU CB HB2 sing N N 219 LEU CB HB3 sing N N 220 LEU CG CD1 sing N N 221 LEU CG CD2 sing N N 222 LEU CG HG sing N N 223 LEU CD1 HD11 sing N N 224 LEU CD1 HD12 sing N N 225 LEU CD1 HD13 sing N N 226 LEU CD2 HD21 sing N N 227 LEU CD2 HD22 sing N N 228 LEU CD2 HD23 sing N N 229 LEU OXT HXT sing N N 230 LYS N CA sing N N 231 LYS N H sing N N 232 LYS N H2 sing N N 233 LYS CA C sing N N 234 LYS CA CB sing N N 235 LYS CA HA sing N N 236 LYS C O doub N N 237 LYS C OXT sing N N 238 LYS CB CG sing N N 239 LYS CB HB2 sing N N 240 LYS CB HB3 sing N N 241 LYS CG CD sing N N 242 LYS CG HG2 sing N N 243 LYS CG HG3 sing N N 244 LYS CD CE sing N N 245 LYS CD HD2 sing N N 246 LYS CD HD3 sing N N 247 LYS CE NZ sing N N 248 LYS CE HE2 sing N N 249 LYS CE HE3 sing N N 250 LYS NZ HZ1 sing N N 251 LYS NZ HZ2 sing N N 252 LYS NZ HZ3 sing N N 253 LYS OXT HXT sing N N 254 MET N CA sing N N 255 MET N H sing N N 256 MET N H2 sing N N 257 MET CA C sing N N 258 MET CA CB sing N N 259 MET CA HA sing N N 260 MET C O doub N N 261 MET C OXT sing N N 262 MET CB CG sing N N 263 MET CB HB2 sing N N 264 MET CB HB3 sing N N 265 MET CG SD sing N N 266 MET CG HG2 sing N N 267 MET CG HG3 sing N N 268 MET SD CE sing N N 269 MET CE HE1 sing N N 270 MET CE HE2 sing N N 271 MET CE HE3 sing N N 272 MET OXT HXT sing N N 273 PHE N CA sing N N 274 PHE N H sing N N 275 PHE N H2 sing N N 276 PHE CA C sing N N 277 PHE CA CB sing N N 278 PHE CA HA sing N N 279 PHE C O doub N N 280 PHE C OXT sing N N 281 PHE CB CG sing N N 282 PHE CB HB2 sing N N 283 PHE CB HB3 sing N N 284 PHE CG CD1 doub Y N 285 PHE CG CD2 sing Y N 286 PHE CD1 CE1 sing Y N 287 PHE CD1 HD1 sing N N 288 PHE CD2 CE2 doub Y N 289 PHE CD2 HD2 sing N N 290 PHE CE1 CZ doub Y N 291 PHE CE1 HE1 sing N N 292 PHE CE2 CZ sing Y N 293 PHE CE2 HE2 sing N N 294 PHE CZ HZ sing N N 295 PHE OXT HXT sing N N 296 PRO N CA sing N N 297 PRO N CD sing N N 298 PRO N H sing N N 299 PRO CA C sing N N 300 PRO CA CB sing N N 301 PRO CA HA sing N N 302 PRO C O doub N N 303 PRO C OXT sing N N 304 PRO CB CG sing N N 305 PRO CB HB2 sing N N 306 PRO CB HB3 sing N N 307 PRO CG CD sing N N 308 PRO CG HG2 sing N N 309 PRO CG HG3 sing N N 310 PRO CD HD2 sing N N 311 PRO CD HD3 sing N N 312 PRO OXT HXT sing N N 313 SER N CA sing N N 314 SER N H sing N N 315 SER N H2 sing N N 316 SER CA C sing N N 317 SER CA CB sing N N 318 SER CA HA sing N N 319 SER C O doub N N 320 SER C OXT sing N N 321 SER CB OG sing N N 322 SER CB HB2 sing N N 323 SER CB HB3 sing N N 324 SER OG HG sing N N 325 SER OXT HXT sing N N 326 THR N CA sing N N 327 THR N H sing N N 328 THR N H2 sing N N 329 THR CA C sing N N 330 THR CA CB sing N N 331 THR CA HA sing N N 332 THR C O doub N N 333 THR C OXT sing N N 334 THR CB OG1 sing N N 335 THR CB CG2 sing N N 336 THR CB HB sing N N 337 THR OG1 HG1 sing N N 338 THR CG2 HG21 sing N N 339 THR CG2 HG22 sing N N 340 THR CG2 HG23 sing N N 341 THR OXT HXT sing N N 342 TRP N CA sing N N 343 TRP N H sing N N 344 TRP N H2 sing N N 345 TRP CA C sing N N 346 TRP CA CB sing N N 347 TRP CA HA sing N N 348 TRP C O doub N N 349 TRP C OXT sing N N 350 TRP CB CG sing N N 351 TRP CB HB2 sing N N 352 TRP CB HB3 sing N N 353 TRP CG CD1 doub Y N 354 TRP CG CD2 sing Y N 355 TRP CD1 NE1 sing Y N 356 TRP CD1 HD1 sing N N 357 TRP CD2 CE2 doub Y N 358 TRP CD2 CE3 sing Y N 359 TRP NE1 CE2 sing Y N 360 TRP NE1 HE1 sing N N 361 TRP CE2 CZ2 sing Y N 362 TRP CE3 CZ3 doub Y N 363 TRP CE3 HE3 sing N N 364 TRP CZ2 CH2 doub Y N 365 TRP CZ2 HZ2 sing N N 366 TRP CZ3 CH2 sing Y N 367 TRP CZ3 HZ3 sing N N 368 TRP CH2 HH2 sing N N 369 TRP OXT HXT sing N N 370 TYR N CA sing N N 371 TYR N H sing N N 372 TYR N H2 sing N N 373 TYR CA C sing N N 374 TYR CA CB sing N N 375 TYR CA HA sing N N 376 TYR C O doub N N 377 TYR C OXT sing N N 378 TYR CB CG sing N N 379 TYR CB HB2 sing N N 380 TYR CB HB3 sing N N 381 TYR CG CD1 doub Y N 382 TYR CG CD2 sing Y N 383 TYR CD1 CE1 sing Y N 384 TYR CD1 HD1 sing N N 385 TYR CD2 CE2 doub Y N 386 TYR CD2 HD2 sing N N 387 TYR CE1 CZ doub Y N 388 TYR CE1 HE1 sing N N 389 TYR CE2 CZ sing Y N 390 TYR CE2 HE2 sing N N 391 TYR CZ OH sing N N 392 TYR OH HH sing N N 393 TYR OXT HXT sing N N 394 U OP3 P sing N N 395 U OP3 HOP3 sing N N 396 U P OP1 doub N N 397 U P OP2 sing N N 398 U P "O5'" sing N N 399 U OP2 HOP2 sing N N 400 U "O5'" "C5'" sing N N 401 U "C5'" "C4'" sing N N 402 U "C5'" "H5'" sing N N 403 U "C5'" "H5''" sing N N 404 U "C4'" "O4'" sing N N 405 U "C4'" "C3'" sing N N 406 U "C4'" "H4'" sing N N 407 U "O4'" "C1'" sing N N 408 U "C3'" "O3'" sing N N 409 U "C3'" "C2'" sing N N 410 U "C3'" "H3'" sing N N 411 U "O3'" "HO3'" sing N N 412 U "C2'" "O2'" sing N N 413 U "C2'" "C1'" sing N N 414 U "C2'" "H2'" sing N N 415 U "O2'" "HO2'" sing N N 416 U "C1'" N1 sing N N 417 U "C1'" "H1'" sing N N 418 U N1 C2 sing N N 419 U N1 C6 sing N N 420 U C2 O2 doub N N 421 U C2 N3 sing N N 422 U N3 C4 sing N N 423 U N3 H3 sing N N 424 U C4 O4 doub N N 425 U C4 C5 sing N N 426 U C5 C6 doub N N 427 U C5 H5 sing N N 428 U C6 H6 sing N N 429 VAL N CA sing N N 430 VAL N H sing N N 431 VAL N H2 sing N N 432 VAL CA C sing N N 433 VAL CA CB sing N N 434 VAL CA HA sing N N 435 VAL C O doub N N 436 VAL C OXT sing N N 437 VAL CB CG1 sing N N 438 VAL CB CG2 sing N N 439 VAL CB HB sing N N 440 VAL CG1 HG11 sing N N 441 VAL CG1 HG12 sing N N 442 VAL CG1 HG13 sing N N 443 VAL CG2 HG21 sing N N 444 VAL CG2 HG22 sing N N 445 VAL CG2 HG23 sing N N 446 VAL OXT HXT sing N N 447 # _ndb_struct_conf_na.entry_id 3S4G _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B A 1 1_555 C U 3 1_555 -1.055 -0.489 -0.248 17.433 4.329 3.955 1 B_A196:U201_C B 196 ? C 201 ? 20 1 1 B A 3 1_555 C U 1 1_555 -0.205 -0.180 0.038 7.962 -10.981 -1.237 2 B_A198:U199_C B 198 ? C 199 ? 20 1 # _atom_sites.entry_id 3S4G _atom_sites.fract_transf_matrix[1][1] 0.003193 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000213 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.003310 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005465 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_