data_3S5A # _entry.id 3S5A # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3S5A pdb_00003s5a 10.2210/pdb3s5a/pdb NDB NA1154 ? ? RCSB RCSB065778 ? ? WWPDB D_1000065778 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-06-06 2 'Structure model' 1 1 2013-07-03 3 'Structure model' 1 2 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_struct_conn_angle 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_ref_seq_dif 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.value' 16 3 'Structure model' '_struct_conn.pdbx_dist_value' 17 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 29 3 'Structure model' '_struct_ref_seq_dif.details' 30 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3S5A _pdbx_database_status.recvd_initial_deposition_date 2011-05-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3BTY 'The same protein complexed with different dsDNA.' unspecified PDB 3S57 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yi, C.' 1 'Chen, B.' 2 'Qi, B.' 3 'Ramirez, B.' 4 'Zhang, W.' 5 'Jia, G.' 6 'Zhang, L.' 7 'Li, C.Q.' 8 'Dinner, A.R.' 9 'Yang, C.-G.' 10 'He, C.' 11 # _citation.id primary _citation.title 'Duplex interrogation by a direct DNA repair protein in search of base damage' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 19 _citation.page_first 671 _citation.page_last 676 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22659876 _citation.pdbx_database_id_DOI 10.1038/nsmb.2320 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yi, C.' 1 ? primary 'Chen, B.' 2 ? primary 'Qi, B.' 3 ? primary 'Zhang, W.' 4 ? primary 'Jia, G.' 5 ? primary 'Zhang, L.' 6 ? primary 'Li, C.J.' 7 ? primary 'Dinner, A.R.' 8 ? primary 'Yang, C.G.' 9 ? primary 'He, C.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2' 23267.611 1 1.14.11.- 'C67S, C165S, C192S, G169C' 'dioxygenase domain (UNP RESIDUES 56-258)' ? 2 polymer syn "5'-D(*CP*TP*GP*TP*CP*TP*CP*AP*CP*TP*GP*TP*CP*G)-3'" 4222.740 1 ? ? ? ? 3 polymer syn "5'-D(*TP*CP*GP*AP*CP*AP*GP*TP*GP*AP*GP*AP*CP*A)-3'" 4313.831 1 ? ? ? ? 4 non-polymer syn 'MANGANESE (II) ION' 54.938 1 ? ? ? ? 5 non-polymer syn '2-OXOGLUTARIC ACID' 146.098 1 ? ? ? ? 6 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 7 non-polymer syn propane-1-thiol 76.161 1 ? ? ? ? 8 water nat water 18.015 338 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Alkylated DNA repair protein alkB homolog 2, Oxy DC1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MSWRHIRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPW IPVLERIRDHVSGVTGQTFNFVLINRYKDGSDHICEHRDDERELAPGSPIASVSFGASRDFVFRHKDSRGKSPSRRVAVV RLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKILL ; ;MSWRHIRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPW IPVLERIRDHVSGVTGQTFNFVLINRYKDGSDHICEHRDDERELAPGSPIASVSFGASRDFVFRHKDSRGKSPSRRVAVV RLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKILL ; A ? 2 polydeoxyribonucleotide no no '(DC)(DT)(DG)(DT)(DC)(DT)(DC)(DA)(DC)(DT)(DG)(DT)(DC)(DG)' CTGTCTCACTGTCG B ? 3 polydeoxyribonucleotide no no '(DT)(DC)(DG)(DA)(DC)(DA)(DG)(DT)(DG)(DA)(DG)(DA)(DC)(DA)' TCGACAGTGAGACA C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MANGANESE (II) ION' MN 5 '2-OXOGLUTARIC ACID' AKG 6 GLYCEROL GOL 7 propane-1-thiol XL3 8 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 TRP n 1 4 ARG n 1 5 HIS n 1 6 ILE n 1 7 ARG n 1 8 ALA n 1 9 GLU n 1 10 GLY n 1 11 LEU n 1 12 ASP n 1 13 SER n 1 14 SER n 1 15 TYR n 1 16 THR n 1 17 VAL n 1 18 LEU n 1 19 PHE n 1 20 GLY n 1 21 LYS n 1 22 ALA n 1 23 GLU n 1 24 ALA n 1 25 ASP n 1 26 GLU n 1 27 ILE n 1 28 PHE n 1 29 GLN n 1 30 GLU n 1 31 LEU n 1 32 GLU n 1 33 LYS n 1 34 GLU n 1 35 VAL n 1 36 GLU n 1 37 TYR n 1 38 PHE n 1 39 THR n 1 40 GLY n 1 41 ALA n 1 42 LEU n 1 43 ALA n 1 44 ARG n 1 45 VAL n 1 46 GLN n 1 47 VAL n 1 48 PHE n 1 49 GLY n 1 50 LYS n 1 51 TRP n 1 52 HIS n 1 53 SER n 1 54 VAL n 1 55 PRO n 1 56 ARG n 1 57 LYS n 1 58 GLN n 1 59 ALA n 1 60 THR n 1 61 TYR n 1 62 GLY n 1 63 ASP n 1 64 ALA n 1 65 GLY n 1 66 LEU n 1 67 THR n 1 68 TYR n 1 69 THR n 1 70 PHE n 1 71 SER n 1 72 GLY n 1 73 LEU n 1 74 THR n 1 75 LEU n 1 76 SER n 1 77 PRO n 1 78 LYS n 1 79 PRO n 1 80 TRP n 1 81 ILE n 1 82 PRO n 1 83 VAL n 1 84 LEU n 1 85 GLU n 1 86 ARG n 1 87 ILE n 1 88 ARG n 1 89 ASP n 1 90 HIS n 1 91 VAL n 1 92 SER n 1 93 GLY n 1 94 VAL n 1 95 THR n 1 96 GLY n 1 97 GLN n 1 98 THR n 1 99 PHE n 1 100 ASN n 1 101 PHE n 1 102 VAL n 1 103 LEU n 1 104 ILE n 1 105 ASN n 1 106 ARG n 1 107 TYR n 1 108 LYS n 1 109 ASP n 1 110 GLY n 1 111 SER n 1 112 ASP n 1 113 HIS n 1 114 ILE n 1 115 CYS n 1 116 GLU n 1 117 HIS n 1 118 ARG n 1 119 ASP n 1 120 ASP n 1 121 GLU n 1 122 ARG n 1 123 GLU n 1 124 LEU n 1 125 ALA n 1 126 PRO n 1 127 GLY n 1 128 SER n 1 129 PRO n 1 130 ILE n 1 131 ALA n 1 132 SER n 1 133 VAL n 1 134 SER n 1 135 PHE n 1 136 GLY n 1 137 ALA n 1 138 SER n 1 139 ARG n 1 140 ASP n 1 141 PHE n 1 142 VAL n 1 143 PHE n 1 144 ARG n 1 145 HIS n 1 146 LYS n 1 147 ASP n 1 148 SER n 1 149 ARG n 1 150 GLY n 1 151 LYS n 1 152 SER n 1 153 PRO n 1 154 SER n 1 155 ARG n 1 156 ARG n 1 157 VAL n 1 158 ALA n 1 159 VAL n 1 160 VAL n 1 161 ARG n 1 162 LEU n 1 163 PRO n 1 164 LEU n 1 165 ALA n 1 166 HIS n 1 167 GLY n 1 168 SER n 1 169 LEU n 1 170 LEU n 1 171 MET n 1 172 MET n 1 173 ASN n 1 174 HIS n 1 175 PRO n 1 176 THR n 1 177 ASN n 1 178 THR n 1 179 HIS n 1 180 TRP n 1 181 TYR n 1 182 HIS n 1 183 SER n 1 184 LEU n 1 185 PRO n 1 186 VAL n 1 187 ARG n 1 188 LYS n 1 189 LYS n 1 190 VAL n 1 191 LEU n 1 192 ALA n 1 193 PRO n 1 194 ARG n 1 195 VAL n 1 196 ASN n 1 197 LEU n 1 198 THR n 1 199 PHE n 1 200 ARG n 1 201 LYS n 1 202 ILE n 1 203 LEU n 1 204 LEU n 2 1 DC n 2 2 DT n 2 3 DG n 2 4 DT n 2 5 DC n 2 6 DT n 2 7 DC n 2 8 DA n 2 9 DC n 2 10 DT n 2 11 DG n 2 12 DT n 2 13 DC n 2 14 DG n 3 1 DT n 3 2 DC n 3 3 DG n 3 4 DA n 3 5 DC n 3 6 DA n 3 7 DG n 3 8 DT n 3 9 DG n 3 10 DA n 3 11 DG n 3 12 DA n 3 13 DC n 3 14 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ABH2, ALKBH2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AKG non-polymer . '2-OXOGLUTARIC ACID' ? 'C5 H6 O5' 146.098 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 XL3 non-polymer . propane-1-thiol ? 'C3 H8 S' 76.161 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 55 55 MET MET A . n A 1 2 SER 2 56 56 SER SER A . n A 1 3 TRP 3 57 57 TRP TRP A . n A 1 4 ARG 4 58 58 ARG ARG A . n A 1 5 HIS 5 59 59 HIS ALA A . n A 1 6 ILE 6 60 60 ILE ILE A . n A 1 7 ARG 7 61 61 ARG ARG A . n A 1 8 ALA 8 62 62 ALA ALA A . n A 1 9 GLU 9 63 63 GLU GLU A . n A 1 10 GLY 10 64 64 GLY GLY A . n A 1 11 LEU 11 65 65 LEU LEU A . n A 1 12 ASP 12 66 66 ASP ASP A . n A 1 13 SER 13 67 67 SER SER A . n A 1 14 SER 14 68 68 SER SER A . n A 1 15 TYR 15 69 69 TYR TYR A . n A 1 16 THR 16 70 70 THR THR A . n A 1 17 VAL 17 71 71 VAL VAL A . n A 1 18 LEU 18 72 72 LEU LEU A . n A 1 19 PHE 19 73 73 PHE PHE A . n A 1 20 GLY 20 74 74 GLY GLY A . n A 1 21 LYS 21 75 75 LYS LYS A . n A 1 22 ALA 22 76 76 ALA ALA A . n A 1 23 GLU 23 77 77 GLU GLU A . n A 1 24 ALA 24 78 78 ALA ALA A . n A 1 25 ASP 25 79 79 ASP ASP A . n A 1 26 GLU 26 80 80 GLU GLU A . n A 1 27 ILE 27 81 81 ILE ILE A . n A 1 28 PHE 28 82 82 PHE PHE A . n A 1 29 GLN 29 83 83 GLN GLN A . n A 1 30 GLU 30 84 84 GLU GLU A . n A 1 31 LEU 31 85 85 LEU LEU A . n A 1 32 GLU 32 86 86 GLU GLU A . n A 1 33 LYS 33 87 87 LYS LYS A . n A 1 34 GLU 34 88 88 GLU GLU A . n A 1 35 VAL 35 89 89 VAL VAL A . n A 1 36 GLU 36 90 90 GLU GLU A . n A 1 37 TYR 37 91 91 TYR TYR A . n A 1 38 PHE 38 92 92 PHE PHE A . n A 1 39 THR 39 93 93 THR THR A . n A 1 40 GLY 40 94 94 GLY GLY A . n A 1 41 ALA 41 95 95 ALA ALA A . n A 1 42 LEU 42 96 96 LEU LEU A . n A 1 43 ALA 43 97 97 ALA ALA A . n A 1 44 ARG 44 98 98 ARG ARG A . n A 1 45 VAL 45 99 99 VAL VAL A . n A 1 46 GLN 46 100 100 GLN GLN A . n A 1 47 VAL 47 101 101 VAL VAL A . n A 1 48 PHE 48 102 102 PHE PHE A . n A 1 49 GLY 49 103 103 GLY GLY A . n A 1 50 LYS 50 104 104 LYS LYS A . n A 1 51 TRP 51 105 105 TRP TRP A . n A 1 52 HIS 52 106 106 HIS HIS A . n A 1 53 SER 53 107 107 SER SER A . n A 1 54 VAL 54 108 108 VAL VAL A . n A 1 55 PRO 55 109 109 PRO PRO A . n A 1 56 ARG 56 110 110 ARG ARG A . n A 1 57 LYS 57 111 111 LYS LYS A . n A 1 58 GLN 58 112 112 GLN GLN A . n A 1 59 ALA 59 113 113 ALA ALA A . n A 1 60 THR 60 114 114 THR THR A . n A 1 61 TYR 61 115 115 TYR TYR A . n A 1 62 GLY 62 116 116 GLY GLY A . n A 1 63 ASP 63 117 117 ASP ASP A . n A 1 64 ALA 64 118 118 ALA ALA A . n A 1 65 GLY 65 119 119 GLY GLY A . n A 1 66 LEU 66 120 120 LEU LEU A . n A 1 67 THR 67 121 121 THR THR A . n A 1 68 TYR 68 122 122 TYR TYR A . n A 1 69 THR 69 123 123 THR THR A . n A 1 70 PHE 70 124 124 PHE PHE A . n A 1 71 SER 71 125 125 SER SER A . n A 1 72 GLY 72 126 126 GLY GLY A . n A 1 73 LEU 73 127 127 LEU ALA A . n A 1 74 THR 74 128 128 THR THR A . n A 1 75 LEU 75 129 129 LEU LEU A . n A 1 76 SER 76 130 130 SER SER A . n A 1 77 PRO 77 131 131 PRO PRO A . n A 1 78 LYS 78 132 132 LYS LYS A . n A 1 79 PRO 79 133 133 PRO PRO A . n A 1 80 TRP 80 134 134 TRP TRP A . n A 1 81 ILE 81 135 135 ILE ILE A . n A 1 82 PRO 82 136 136 PRO PRO A . n A 1 83 VAL 83 137 137 VAL VAL A . n A 1 84 LEU 84 138 138 LEU LEU A . n A 1 85 GLU 85 139 139 GLU GLU A . n A 1 86 ARG 86 140 140 ARG ARG A . n A 1 87 ILE 87 141 141 ILE ILE A . n A 1 88 ARG 88 142 142 ARG ARG A . n A 1 89 ASP 89 143 143 ASP ASP A . n A 1 90 HIS 90 144 144 HIS HIS A . n A 1 91 VAL 91 145 145 VAL VAL A . n A 1 92 SER 92 146 146 SER SER A . n A 1 93 GLY 93 147 147 GLY GLY A . n A 1 94 VAL 94 148 148 VAL VAL A . n A 1 95 THR 95 149 149 THR THR A . n A 1 96 GLY 96 150 150 GLY GLY A . n A 1 97 GLN 97 151 151 GLN GLN A . n A 1 98 THR 98 152 152 THR THR A . n A 1 99 PHE 99 153 153 PHE PHE A . n A 1 100 ASN 100 154 154 ASN ASN A . n A 1 101 PHE 101 155 155 PHE PHE A . n A 1 102 VAL 102 156 156 VAL VAL A . n A 1 103 LEU 103 157 157 LEU LEU A . n A 1 104 ILE 104 158 158 ILE ILE A . n A 1 105 ASN 105 159 159 ASN ASN A . n A 1 106 ARG 106 160 160 ARG ARG A . n A 1 107 TYR 107 161 161 TYR TYR A . n A 1 108 LYS 108 162 162 LYS LYS A . n A 1 109 ASP 109 163 163 ASP ASP A . n A 1 110 GLY 110 164 164 GLY GLY A . n A 1 111 SER 111 165 165 SER SER A . n A 1 112 ASP 112 166 166 ASP ASP A . n A 1 113 HIS 113 167 167 HIS HIS A . n A 1 114 ILE 114 168 168 ILE ILE A . n A 1 115 CYS 115 169 169 CYS CYS A . n A 1 116 GLU 116 170 170 GLU GLU A . n A 1 117 HIS 117 171 171 HIS HIS A . n A 1 118 ARG 118 172 172 ARG ARG A . n A 1 119 ASP 119 173 173 ASP ASP A . n A 1 120 ASP 120 174 174 ASP ASP A . n A 1 121 GLU 121 175 175 GLU GLU A . n A 1 122 ARG 122 176 176 ARG ARG A . n A 1 123 GLU 123 177 177 GLU GLU A . n A 1 124 LEU 124 178 178 LEU LEU A . n A 1 125 ALA 125 179 179 ALA ALA A . n A 1 126 PRO 126 180 180 PRO PRO A . n A 1 127 GLY 127 181 181 GLY GLY A . n A 1 128 SER 128 182 182 SER SER A . n A 1 129 PRO 129 183 183 PRO PRO A . n A 1 130 ILE 130 184 184 ILE ILE A . n A 1 131 ALA 131 185 185 ALA ALA A . n A 1 132 SER 132 186 186 SER SER A . n A 1 133 VAL 133 187 187 VAL VAL A . n A 1 134 SER 134 188 188 SER SER A . n A 1 135 PHE 135 189 189 PHE PHE A . n A 1 136 GLY 136 190 190 GLY GLY A . n A 1 137 ALA 137 191 191 ALA ALA A . n A 1 138 SER 138 192 192 SER SER A . n A 1 139 ARG 139 193 193 ARG ARG A . n A 1 140 ASP 140 194 194 ASP ASP A . n A 1 141 PHE 141 195 195 PHE PHE A . n A 1 142 VAL 142 196 196 VAL VAL A . n A 1 143 PHE 143 197 197 PHE PHE A . n A 1 144 ARG 144 198 198 ARG ARG A . n A 1 145 HIS 145 199 199 HIS HIS A . n A 1 146 LYS 146 200 200 LYS LYS A . n A 1 147 ASP 147 201 201 ASP ASP A . n A 1 148 SER 148 202 202 SER SER A . n A 1 149 ARG 149 203 203 ARG ARG A . n A 1 150 GLY 150 204 204 GLY GLY A . n A 1 151 LYS 151 205 205 LYS LYS A . n A 1 152 SER 152 206 206 SER SER A . n A 1 153 PRO 153 207 207 PRO PRO A . n A 1 154 SER 154 208 208 SER SER A . n A 1 155 ARG 155 209 209 ARG ARG A . n A 1 156 ARG 156 210 210 ARG ARG A . n A 1 157 VAL 157 211 211 VAL VAL A . n A 1 158 ALA 158 212 212 ALA ALA A . n A 1 159 VAL 159 213 213 VAL VAL A . n A 1 160 VAL 160 214 214 VAL VAL A . n A 1 161 ARG 161 215 215 ARG ARG A . n A 1 162 LEU 162 216 216 LEU LEU A . n A 1 163 PRO 163 217 217 PRO PRO A . n A 1 164 LEU 164 218 218 LEU LEU A . n A 1 165 ALA 165 219 219 ALA ALA A . n A 1 166 HIS 166 220 220 HIS HIS A . n A 1 167 GLY 167 221 221 GLY GLY A . n A 1 168 SER 168 222 222 SER SER A . n A 1 169 LEU 169 223 223 LEU LEU A . n A 1 170 LEU 170 224 224 LEU LEU A . n A 1 171 MET 171 225 225 MET MET A . n A 1 172 MET 172 226 226 MET MET A . n A 1 173 ASN 173 227 227 ASN ASN A . n A 1 174 HIS 174 228 228 HIS HIS A . n A 1 175 PRO 175 229 229 PRO PRO A . n A 1 176 THR 176 230 230 THR THR A . n A 1 177 ASN 177 231 231 ASN ASN A . n A 1 178 THR 178 232 232 THR THR A . n A 1 179 HIS 179 233 233 HIS HIS A . n A 1 180 TRP 180 234 234 TRP TRP A . n A 1 181 TYR 181 235 235 TYR TYR A . n A 1 182 HIS 182 236 236 HIS HIS A . n A 1 183 SER 183 237 237 SER SER A . n A 1 184 LEU 184 238 238 LEU LEU A . n A 1 185 PRO 185 239 239 PRO PRO A . n A 1 186 VAL 186 240 240 VAL VAL A . n A 1 187 ARG 187 241 241 ARG ARG A . n A 1 188 LYS 188 242 242 LYS LYS A . n A 1 189 LYS 189 243 243 LYS LYS A . n A 1 190 VAL 190 244 244 VAL VAL A . n A 1 191 LEU 191 245 245 LEU LEU A . n A 1 192 ALA 192 246 246 ALA ALA A . n A 1 193 PRO 193 247 247 PRO PRO A . n A 1 194 ARG 194 248 248 ARG ARG A . n A 1 195 VAL 195 249 249 VAL VAL A . n A 1 196 ASN 196 250 250 ASN ASN A . n A 1 197 LEU 197 251 251 LEU LEU A . n A 1 198 THR 198 252 252 THR THR A . n A 1 199 PHE 199 253 253 PHE PHE A . n A 1 200 ARG 200 254 254 ARG ARG A . n A 1 201 LYS 201 255 255 LYS LYS A . n A 1 202 ILE 202 256 256 ILE ILE A . n A 1 203 LEU 203 257 257 LEU LEU A . n A 1 204 LEU 204 258 258 LEU LEU A . n B 2 1 DC 1 259 259 DC C B . n B 2 2 DT 2 260 260 DT T B . n B 2 3 DG 3 261 261 DG G B . n B 2 4 DT 4 262 262 DT T B . n B 2 5 DC 5 263 263 DC C B . n B 2 6 DT 6 264 264 DT T B . n B 2 7 DC 7 265 265 DC C B . n B 2 8 DA 8 266 266 DA A B . n B 2 9 DC 9 267 267 DC C B . n B 2 10 DT 10 268 268 DT T B . n B 2 11 DG 11 269 269 DG G B . n B 2 12 DT 12 270 270 DT T B . n B 2 13 DC 13 271 271 DC C B . n B 2 14 DG 14 272 272 DG G B . n C 3 1 DT 1 271 271 DT T C . n C 3 2 DC 2 272 272 DC C C . n C 3 3 DG 3 273 273 DG G C . n C 3 4 DA 4 274 274 DA A C . n C 3 5 DC 5 275 275 DC C C . n C 3 6 DA 6 276 276 DA A C . n C 3 7 DG 7 277 277 DG G C . n C 3 8 DT 8 278 278 DT T C . n C 3 9 DG 9 279 279 DG G C . n C 3 10 DA 10 280 280 DA A C . n C 3 11 DG 11 281 281 DG G C . n C 3 12 DA 12 282 282 DA A C . n C 3 13 DC 13 283 283 DC C C . n C 3 14 DA 14 284 284 DA A C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MN 1 1 1 MN MN A . E 5 AKG 1 259 1 AKG SUB A . F 6 GOL 1 260 1 GOL GLO A . G 6 GOL 1 2 2 GOL GLO A . H 6 GOL 1 3 3 GOL GLO A . I 7 XL3 1 1 1 XL3 XL3 B . J 8 HOH 1 4 4 HOH HOH A . J 8 HOH 2 5 5 HOH HOH A . J 8 HOH 3 6 6 HOH HOH A . J 8 HOH 4 7 7 HOH HOH A . J 8 HOH 5 8 8 HOH HOH A . J 8 HOH 6 9 9 HOH HOH A . J 8 HOH 7 10 10 HOH HOH A . J 8 HOH 8 11 11 HOH HOH A . J 8 HOH 9 12 12 HOH HOH A . J 8 HOH 10 13 13 HOH HOH A . J 8 HOH 11 14 14 HOH HOH A . J 8 HOH 12 17 17 HOH HOH A . J 8 HOH 13 18 18 HOH HOH A . J 8 HOH 14 20 20 HOH HOH A . J 8 HOH 15 21 21 HOH HOH A . J 8 HOH 16 22 22 HOH HOH A . J 8 HOH 17 24 24 HOH HOH A . J 8 HOH 18 25 25 HOH HOH A . J 8 HOH 19 26 26 HOH HOH A . J 8 HOH 20 28 28 HOH HOH A . J 8 HOH 21 29 29 HOH HOH A . J 8 HOH 22 30 30 HOH HOH A . J 8 HOH 23 31 31 HOH HOH A . J 8 HOH 24 32 32 HOH HOH A . J 8 HOH 25 33 33 HOH HOH A . J 8 HOH 26 35 35 HOH HOH A . J 8 HOH 27 36 36 HOH HOH A . J 8 HOH 28 37 37 HOH HOH A . J 8 HOH 29 38 38 HOH HOH A . J 8 HOH 30 39 39 HOH HOH A . J 8 HOH 31 40 40 HOH HOH A . J 8 HOH 32 41 41 HOH HOH A . J 8 HOH 33 42 42 HOH HOH A . J 8 HOH 34 43 43 HOH HOH A . J 8 HOH 35 44 44 HOH HOH A . J 8 HOH 36 45 45 HOH HOH A . J 8 HOH 37 46 46 HOH HOH A . J 8 HOH 38 47 47 HOH HOH A . J 8 HOH 39 48 48 HOH HOH A . J 8 HOH 40 49 49 HOH HOH A . J 8 HOH 41 50 50 HOH HOH A . J 8 HOH 42 51 51 HOH HOH A . J 8 HOH 43 52 52 HOH HOH A . J 8 HOH 44 53 53 HOH HOH A . J 8 HOH 45 54 54 HOH HOH A . J 8 HOH 46 261 261 HOH HOH A . J 8 HOH 47 262 262 HOH HOH A . J 8 HOH 48 263 263 HOH HOH A . J 8 HOH 49 264 264 HOH HOH A . J 8 HOH 50 265 1 HOH HOH A . J 8 HOH 51 266 266 HOH HOH A . J 8 HOH 52 267 3 HOH HOH A . J 8 HOH 53 268 55 HOH HOH A . J 8 HOH 54 269 269 HOH HOH A . J 8 HOH 55 270 56 HOH HOH A . J 8 HOH 56 271 271 HOH HOH A . J 8 HOH 57 272 272 HOH HOH A . J 8 HOH 58 273 273 HOH HOH A . J 8 HOH 59 274 274 HOH HOH A . J 8 HOH 60 275 275 HOH HOH A . J 8 HOH 61 276 276 HOH HOH A . J 8 HOH 62 277 277 HOH HOH A . J 8 HOH 63 278 278 HOH HOH A . J 8 HOH 64 279 279 HOH HOH A . J 8 HOH 65 280 280 HOH HOH A . J 8 HOH 66 281 281 HOH HOH A . J 8 HOH 67 282 282 HOH HOH A . J 8 HOH 68 283 283 HOH HOH A . J 8 HOH 69 284 284 HOH HOH A . J 8 HOH 70 285 285 HOH HOH A . J 8 HOH 71 286 286 HOH HOH A . J 8 HOH 72 287 57 HOH HOH A . J 8 HOH 73 288 58 HOH HOH A . J 8 HOH 74 289 289 HOH HOH A . J 8 HOH 75 290 290 HOH HOH A . J 8 HOH 76 291 60 HOH HOH A . J 8 HOH 77 292 61 HOH HOH A . J 8 HOH 78 293 62 HOH HOH A . J 8 HOH 79 294 64 HOH HOH A . J 8 HOH 80 295 65 HOH HOH A . J 8 HOH 81 296 296 HOH HOH A . J 8 HOH 82 297 297 HOH HOH A . J 8 HOH 83 298 298 HOH HOH A . J 8 HOH 84 299 299 HOH HOH A . J 8 HOH 85 300 300 HOH HOH A . J 8 HOH 86 301 301 HOH HOH A . J 8 HOH 87 302 302 HOH HOH A . J 8 HOH 88 303 303 HOH HOH A . J 8 HOH 89 304 304 HOH HOH A . J 8 HOH 90 305 305 HOH HOH A . J 8 HOH 91 306 306 HOH HOH A . J 8 HOH 92 307 307 HOH HOH A . J 8 HOH 93 308 308 HOH HOH A . J 8 HOH 94 309 309 HOH HOH A . J 8 HOH 95 310 66 HOH HOH A . J 8 HOH 96 311 311 HOH HOH A . J 8 HOH 97 312 67 HOH HOH A . J 8 HOH 98 313 313 HOH HOH A . J 8 HOH 99 314 314 HOH HOH A . J 8 HOH 100 315 315 HOH HOH A . J 8 HOH 101 316 316 HOH HOH A . J 8 HOH 102 317 317 HOH HOH A . J 8 HOH 103 318 318 HOH HOH A . J 8 HOH 104 319 68 HOH HOH A . J 8 HOH 105 320 320 HOH HOH A . J 8 HOH 106 321 321 HOH HOH A . J 8 HOH 107 322 322 HOH HOH A . J 8 HOH 108 323 69 HOH HOH A . J 8 HOH 109 324 70 HOH HOH A . J 8 HOH 110 325 325 HOH HOH A . J 8 HOH 111 326 71 HOH HOH A . J 8 HOH 112 327 327 HOH HOH A . J 8 HOH 113 328 328 HOH HOH A . J 8 HOH 114 329 329 HOH HOH A . J 8 HOH 115 330 330 HOH HOH A . J 8 HOH 116 331 331 HOH HOH A . J 8 HOH 117 332 332 HOH HOH A . J 8 HOH 118 333 72 HOH HOH A . J 8 HOH 119 334 334 HOH HOH A . J 8 HOH 120 335 335 HOH HOH A . J 8 HOH 121 336 336 HOH HOH A . J 8 HOH 122 337 337 HOH HOH A . J 8 HOH 123 338 338 HOH HOH A . J 8 HOH 124 339 73 HOH HOH A . J 8 HOH 125 340 75 HOH HOH A . J 8 HOH 126 341 76 HOH HOH A . J 8 HOH 127 342 77 HOH HOH A . J 8 HOH 128 343 78 HOH HOH A . J 8 HOH 129 344 80 HOH HOH A . J 8 HOH 130 345 82 HOH HOH A . J 8 HOH 131 346 83 HOH HOH A . J 8 HOH 132 347 84 HOH HOH A . J 8 HOH 133 348 85 HOH HOH A . J 8 HOH 134 349 87 HOH HOH A . J 8 HOH 135 350 89 HOH HOH A . J 8 HOH 136 351 90 HOH HOH A . J 8 HOH 137 352 91 HOH HOH A . J 8 HOH 138 353 92 HOH HOH A . J 8 HOH 139 354 93 HOH HOH A . J 8 HOH 140 355 94 HOH HOH A . J 8 HOH 141 356 95 HOH HOH A . J 8 HOH 142 357 97 HOH HOH A . J 8 HOH 143 358 100 HOH HOH A . J 8 HOH 144 359 101 HOH HOH A . J 8 HOH 145 360 102 HOH HOH A . J 8 HOH 146 361 103 HOH HOH A . J 8 HOH 147 362 105 HOH HOH A . J 8 HOH 148 363 106 HOH HOH A . J 8 HOH 149 364 108 HOH HOH A . J 8 HOH 150 365 109 HOH HOH A . J 8 HOH 151 366 110 HOH HOH A . J 8 HOH 152 367 111 HOH HOH A . J 8 HOH 153 368 112 HOH HOH A . J 8 HOH 154 369 113 HOH HOH A . J 8 HOH 155 370 114 HOH HOH A . J 8 HOH 156 371 116 HOH HOH A . J 8 HOH 157 372 117 HOH HOH A . J 8 HOH 158 373 118 HOH HOH A . J 8 HOH 159 374 119 HOH HOH A . J 8 HOH 160 375 120 HOH HOH A . J 8 HOH 161 376 121 HOH HOH A . J 8 HOH 162 377 122 HOH HOH A . J 8 HOH 163 378 123 HOH HOH A . J 8 HOH 164 379 124 HOH HOH A . J 8 HOH 165 380 125 HOH HOH A . J 8 HOH 166 381 126 HOH HOH A . J 8 HOH 167 382 127 HOH HOH A . J 8 HOH 168 383 128 HOH HOH A . J 8 HOH 169 384 131 HOH HOH A . J 8 HOH 170 385 132 HOH HOH A . J 8 HOH 171 386 134 HOH HOH A . J 8 HOH 172 387 135 HOH HOH A . J 8 HOH 173 388 136 HOH HOH A . J 8 HOH 174 389 137 HOH HOH A . J 8 HOH 175 390 138 HOH HOH A . J 8 HOH 176 391 141 HOH HOH A . J 8 HOH 177 392 142 HOH HOH A . J 8 HOH 178 393 143 HOH HOH A . J 8 HOH 179 394 144 HOH HOH A . J 8 HOH 180 395 145 HOH HOH A . J 8 HOH 181 396 146 HOH HOH A . J 8 HOH 182 397 148 HOH HOH A . J 8 HOH 183 398 150 HOH HOH A . J 8 HOH 184 399 151 HOH HOH A . J 8 HOH 185 400 152 HOH HOH A . J 8 HOH 186 401 153 HOH HOH A . J 8 HOH 187 402 154 HOH HOH A . J 8 HOH 188 403 155 HOH HOH A . J 8 HOH 189 404 156 HOH HOH A . J 8 HOH 190 405 157 HOH HOH A . J 8 HOH 191 406 158 HOH HOH A . J 8 HOH 192 407 159 HOH HOH A . J 8 HOH 193 408 160 HOH HOH A . J 8 HOH 194 409 161 HOH HOH A . J 8 HOH 195 410 162 HOH HOH A . J 8 HOH 196 411 163 HOH HOH A . J 8 HOH 197 412 164 HOH HOH A . J 8 HOH 198 413 166 HOH HOH A . J 8 HOH 199 414 167 HOH HOH A . J 8 HOH 200 415 168 HOH HOH A . J 8 HOH 201 416 169 HOH HOH A . J 8 HOH 202 417 170 HOH HOH A . J 8 HOH 203 418 175 HOH HOH A . J 8 HOH 204 419 176 HOH HOH A . J 8 HOH 205 420 177 HOH HOH A . J 8 HOH 206 421 178 HOH HOH A . J 8 HOH 207 422 179 HOH HOH A . J 8 HOH 208 423 180 HOH HOH A . J 8 HOH 209 424 182 HOH HOH A . J 8 HOH 210 425 183 HOH HOH A . J 8 HOH 211 426 184 HOH HOH A . J 8 HOH 212 427 185 HOH HOH A . J 8 HOH 213 428 186 HOH HOH A . J 8 HOH 214 429 187 HOH HOH A . J 8 HOH 215 430 189 HOH HOH A . J 8 HOH 216 431 190 HOH HOH A . J 8 HOH 217 432 191 HOH HOH A . J 8 HOH 218 433 192 HOH HOH A . J 8 HOH 219 434 193 HOH HOH A . J 8 HOH 220 435 194 HOH HOH A . J 8 HOH 221 436 195 HOH HOH A . J 8 HOH 222 437 196 HOH HOH A . J 8 HOH 223 438 197 HOH HOH A . J 8 HOH 224 439 198 HOH HOH A . J 8 HOH 225 440 199 HOH HOH A . J 8 HOH 226 441 200 HOH HOH A . J 8 HOH 227 442 201 HOH HOH A . J 8 HOH 228 443 203 HOH HOH A . J 8 HOH 229 444 204 HOH HOH A . J 8 HOH 230 445 208 HOH HOH A . J 8 HOH 231 446 212 HOH HOH A . J 8 HOH 232 447 213 HOH HOH A . J 8 HOH 233 448 214 HOH HOH A . J 8 HOH 234 449 215 HOH HOH A . J 8 HOH 235 450 216 HOH HOH A . J 8 HOH 236 451 217 HOH HOH A . J 8 HOH 237 452 218 HOH HOH A . J 8 HOH 238 453 220 HOH HOH A . J 8 HOH 239 454 221 HOH HOH A . J 8 HOH 240 455 222 HOH HOH A . J 8 HOH 241 456 225 HOH HOH A . J 8 HOH 242 457 226 HOH HOH A . J 8 HOH 243 458 227 HOH HOH A . J 8 HOH 244 459 229 HOH HOH A . J 8 HOH 245 460 230 HOH HOH A . J 8 HOH 246 461 231 HOH HOH A . J 8 HOH 247 462 232 HOH HOH A . J 8 HOH 248 463 233 HOH HOH A . J 8 HOH 249 464 234 HOH HOH A . J 8 HOH 250 465 235 HOH HOH A . J 8 HOH 251 466 236 HOH HOH A . J 8 HOH 252 467 237 HOH HOH A . J 8 HOH 253 468 238 HOH HOH A . J 8 HOH 254 469 239 HOH HOH A . J 8 HOH 255 470 240 HOH HOH A . J 8 HOH 256 471 241 HOH HOH A . J 8 HOH 257 472 242 HOH HOH A . J 8 HOH 258 473 243 HOH HOH A . J 8 HOH 259 474 244 HOH HOH A . J 8 HOH 260 475 245 HOH HOH A . J 8 HOH 261 476 247 HOH HOH A . J 8 HOH 262 477 248 HOH HOH A . J 8 HOH 263 478 250 HOH HOH A . J 8 HOH 264 479 251 HOH HOH A . J 8 HOH 265 480 253 HOH HOH A . J 8 HOH 266 481 254 HOH HOH A . J 8 HOH 267 482 255 HOH HOH A . J 8 HOH 268 483 256 HOH HOH A . J 8 HOH 269 484 257 HOH HOH A . J 8 HOH 270 485 259 HOH HOH A . J 8 HOH 271 486 260 HOH HOH A . K 8 HOH 1 2 2 HOH HOH B . K 8 HOH 2 15 15 HOH HOH B . K 8 HOH 3 19 19 HOH HOH B . K 8 HOH 4 23 23 HOH HOH B . K 8 HOH 5 34 34 HOH HOH B . K 8 HOH 6 63 63 HOH HOH B . K 8 HOH 7 81 81 HOH HOH B . K 8 HOH 8 86 86 HOH HOH B . K 8 HOH 9 96 96 HOH HOH B . K 8 HOH 10 98 98 HOH HOH B . K 8 HOH 11 133 133 HOH HOH B . K 8 HOH 12 140 140 HOH HOH B . K 8 HOH 13 149 149 HOH HOH B . K 8 HOH 14 171 171 HOH HOH B . K 8 HOH 15 172 172 HOH HOH B . K 8 HOH 16 174 174 HOH HOH B . K 8 HOH 17 181 181 HOH HOH B . K 8 HOH 18 205 205 HOH HOH B . K 8 HOH 19 206 206 HOH HOH B . K 8 HOH 20 207 207 HOH HOH B . K 8 HOH 21 211 211 HOH HOH B . K 8 HOH 22 223 223 HOH HOH B . K 8 HOH 23 224 224 HOH HOH B . K 8 HOH 24 249 249 HOH HOH B . K 8 HOH 25 258 258 HOH HOH B . K 8 HOH 26 287 287 HOH HOH B . K 8 HOH 27 288 288 HOH HOH B . K 8 HOH 28 291 291 HOH HOH B . K 8 HOH 29 292 292 HOH HOH B . K 8 HOH 30 293 293 HOH HOH B . K 8 HOH 31 294 294 HOH HOH B . K 8 HOH 32 295 295 HOH HOH B . K 8 HOH 33 310 310 HOH HOH B . K 8 HOH 34 323 323 HOH HOH B . L 8 HOH 1 16 16 HOH HOH C . L 8 HOH 2 27 27 HOH HOH C . L 8 HOH 3 59 59 HOH HOH C . L 8 HOH 4 74 74 HOH HOH C . L 8 HOH 5 79 79 HOH HOH C . L 8 HOH 6 88 88 HOH HOH C . L 8 HOH 7 99 99 HOH HOH C . L 8 HOH 8 104 104 HOH HOH C . L 8 HOH 9 107 107 HOH HOH C . L 8 HOH 10 115 115 HOH HOH C . L 8 HOH 11 129 129 HOH HOH C . L 8 HOH 12 130 130 HOH HOH C . L 8 HOH 13 139 139 HOH HOH C . L 8 HOH 14 147 147 HOH HOH C . L 8 HOH 15 165 165 HOH HOH C . L 8 HOH 16 173 173 HOH HOH C . L 8 HOH 17 188 188 HOH HOH C . L 8 HOH 18 202 202 HOH HOH C . L 8 HOH 19 209 209 HOH HOH C . L 8 HOH 20 210 210 HOH HOH C . L 8 HOH 21 219 219 HOH HOH C . L 8 HOH 22 228 228 HOH HOH C . L 8 HOH 23 246 246 HOH HOH C . L 8 HOH 24 252 252 HOH HOH C . L 8 HOH 25 265 265 HOH HOH C . L 8 HOH 26 267 267 HOH HOH C . L 8 HOH 27 268 268 HOH HOH C . L 8 HOH 28 270 270 HOH HOH C . L 8 HOH 29 312 312 HOH HOH C . L 8 HOH 30 319 319 HOH HOH C . L 8 HOH 31 324 324 HOH HOH C . L 8 HOH 32 326 326 HOH HOH C . L 8 HOH 33 333 333 HOH HOH C . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS 59 ? CG ? A HIS 5 CG 2 1 Y 1 A HIS 59 ? ND1 ? A HIS 5 ND1 3 1 Y 1 A HIS 59 ? CD2 ? A HIS 5 CD2 4 1 Y 1 A HIS 59 ? CE1 ? A HIS 5 CE1 5 1 Y 1 A HIS 59 ? NE2 ? A HIS 5 NE2 6 1 Y 1 A LEU 127 ? CG ? A LEU 73 CG 7 1 Y 1 A LEU 127 ? CD1 ? A LEU 73 CD1 8 1 Y 1 A LEU 127 ? CD2 ? A LEU 73 CD2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 PHASES phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 3S5A _cell.length_a 45.968 _cell.length_b 60.610 _cell.length_c 65.588 _cell.angle_alpha 90.00 _cell.angle_beta 90.52 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3S5A _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3S5A _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.87 _exptl_crystal.density_percent_sol 57.18 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.1 _exptl_crystal_grow.pdbx_details ;12% PEG 8000, 100mM sodium chloride, 50mM Magnesium chloride, 100mM cacodylate, pH 6.1, VAPOR DIFFUSION, HANGING DROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2011-04-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.pdbx_synchrotron_site SSRF _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.entry_id 3S5A _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.55 _reflns.number_obs 52281 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.040 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 30 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.55 _reflns_shell.d_res_low 1.61 _reflns_shell.percent_possible_all 99.5 _reflns_shell.Rmerge_I_obs 0.666 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.pdbx_redundancy 6.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 5173 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3S5A _refine.ls_number_reflns_obs 37531 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 99.50 _refine.ls_R_factor_obs 0.19922 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19707 _refine.ls_R_factor_R_free 0.23796 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1996 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.958 _refine.correlation_coeff_Fo_to_Fc_free 0.942 _refine.B_iso_mean 32.871 _refine.aniso_B[1][1] 0.35 _refine.aniso_B[2][2] 0.78 _refine.aniso_B[3][3] -1.14 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.06 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.149 _refine.pdbx_overall_ESU_R_Free 0.109 _refine.overall_SU_ML 0.070 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.591 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1636 _refine_hist.pdbx_number_atoms_nucleic_acid 566 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.number_atoms_solvent 338 _refine_hist.number_atoms_total 2573 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.021 ? 2419 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.487 2.254 ? 3397 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.619 5.000 ? 219 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 31.473 21.807 ? 83 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.455 15.000 ? 292 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.120 15.000 ? 18 'X-RAY DIFFRACTION' ? r_chiral_restr 0.081 0.200 ? 365 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1686 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.190 0.200 ? 1001 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.302 0.200 ? 1569 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.158 0.200 ? 296 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.122 0.200 ? 20 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.153 0.200 ? 15 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.205 1.500 ? 1088 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.870 2.000 ? 1732 'X-RAY DIFFRACTION' ? r_scbond_it 2.421 3.000 ? 1693 'X-RAY DIFFRACTION' ? r_scangle_it 3.366 4.500 ? 1665 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2.038 3.000 ? 2781 'X-RAY DIFFRACTION' ? r_sphericity_free 5.097 3.000 ? 339 'X-RAY DIFFRACTION' ? r_sphericity_bonded 4.454 3.000 ? 2301 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.700 _refine_ls_shell.d_res_low 1.744 _refine_ls_shell.number_reflns_R_work 2726 _refine_ls_shell.R_factor_R_work 0.232 _refine_ls_shell.percent_reflns_obs 99.83 _refine_ls_shell.R_factor_R_free 0.278 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 150 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _database_PDB_matrix.entry_id 3S5A _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3S5A _struct.title 'ABH2 cross-linked to undamaged dsDNA-2 with cofactors' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3S5A _struct_keywords.pdbx_keywords OXIDOREDUCTASE/DNA _struct_keywords.text 'PROTEIN-DNA COMPLEX, DOUBLE HELIX, Jelly-roll fold, dioxygenase, DNA Binding, cross-linking, OXIDOREDUCTASE-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? I N N 7 ? J N N 8 ? K N N 8 ? L N N 8 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP ALKB2_HUMAN Q6NS38 1 ;SWRHIRAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWI PVLERIRDHVSGVTGQTFNFVLINRYKDGCDHIGEHRDDERELAPGSPIASVSFGACRDFVFRHKDSRGKSPSRRVAVVR LPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKILL ; 56 ? 2 PDB 3S5A 3S5A 2 ? ? ? 3 PDB 3S5A 3S5A 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3S5A A 2 ? 204 ? Q6NS38 56 ? 258 ? 56 258 2 2 3S5A B 1 ? 14 ? 3S5A 259 ? 272 ? 259 272 3 3 3S5A C 1 ? 14 ? 3S5A 271 ? 284 ? 271 284 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3S5A MET A 1 ? UNP Q6NS38 ? ? 'expression tag' 55 1 1 3S5A SER A 13 ? UNP Q6NS38 CYS 67 'engineered mutation' 67 2 1 3S5A SER A 111 ? UNP Q6NS38 CYS 165 'engineered mutation' 165 3 1 3S5A CYS A 115 ? UNP Q6NS38 GLY 169 'engineered mutation' 169 4 1 3S5A SER A 138 ? UNP Q6NS38 CYS 192 'engineered mutation' 192 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4580 ? 1 MORE -36 ? 1 'SSA (A^2)' 13840 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 20 ? VAL A 35 ? GLY A 74 VAL A 89 1 ? 16 HELX_P HELX_P2 2 THR A 39 ? LEU A 42 ? THR A 93 LEU A 96 5 ? 4 HELX_P HELX_P3 3 ILE A 81 ? GLY A 96 ? ILE A 135 GLY A 150 1 ? 16 HELX_P HELX_P4 4 ASP A 147 ? ARG A 149 ? ASP A 201 ARG A 203 5 ? 3 HELX_P HELX_P5 5 PRO A 175 ? HIS A 179 ? PRO A 229 HIS A 233 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? D MN . MN ? ? ? 1_555 A HIS 117 NE2 ? ? A MN 1 A HIS 171 1_555 ? ? ? ? ? ? ? 2.127 ? ? metalc2 metalc ? ? D MN . MN ? ? ? 1_555 A ASP 119 OD1 ? ? A MN 1 A ASP 173 1_555 ? ? ? ? ? ? ? 2.158 ? ? metalc3 metalc ? ? D MN . MN ? ? ? 1_555 A HIS 182 NE2 ? ? A MN 1 A HIS 236 1_555 ? ? ? ? ? ? ? 2.230 ? ? metalc4 metalc ? ? D MN . MN ? ? ? 1_555 E AKG . O5 ? ? A MN 1 A AKG 259 1_555 ? ? ? ? ? ? ? 2.202 ? ? metalc5 metalc ? ? D MN . MN ? ? ? 1_555 E AKG . O2 ? ? A MN 1 A AKG 259 1_555 ? ? ? ? ? ? ? 2.205 ? ? metalc6 metalc ? ? D MN . MN ? ? ? 1_555 J HOH . O ? ? A MN 1 A HOH 265 1_555 ? ? ? ? ? ? ? 2.253 ? ? hydrog1 hydrog ? ? B DT 2 N3 ? ? ? 1_555 C DA 14 N1 ? ? B DT 260 C DA 284 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DT 2 O4 ? ? ? 1_555 C DA 14 N6 ? ? B DT 260 C DA 284 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 13 N3 ? ? B DG 261 C DC 283 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 13 O2 ? ? B DG 261 C DC 283 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 13 N4 ? ? B DG 261 C DC 283 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 12 N1 ? ? B DT 262 C DA 282 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 12 N6 ? ? B DT 262 C DA 282 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 11 N1 ? ? B DC 263 C DG 281 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 11 O6 ? ? B DC 263 C DG 281 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 11 N2 ? ? B DC 263 C DG 281 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C DA 10 N1 ? ? B DT 264 C DA 280 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DT 6 O4 ? ? ? 1_555 C DA 10 N6 ? ? B DT 264 C DA 280 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 7 N3 ? ? ? 1_555 C DG 9 N1 ? ? B DC 265 C DG 279 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 7 N4 ? ? ? 1_555 C DG 9 O6 ? ? B DC 265 C DG 279 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 7 O2 ? ? ? 1_555 C DG 9 N2 ? ? B DC 265 C DG 279 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DA 8 N1 ? ? ? 1_555 C DT 8 N3 ? ? B DA 266 C DT 278 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DA 8 N6 ? ? ? 1_555 C DT 8 O4 ? ? B DA 266 C DT 278 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DC 9 N3 ? ? ? 1_555 C DG 7 N1 ? ? B DC 267 C DG 277 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DC 9 N4 ? ? ? 1_555 C DG 7 O6 ? ? B DC 267 C DG 277 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DC 9 O2 ? ? ? 1_555 C DG 7 N2 ? ? B DC 267 C DG 277 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DT 10 N3 ? ? ? 1_555 C DA 6 N1 ? ? B DT 268 C DA 276 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DT 10 O4 ? ? ? 1_555 C DA 6 N6 ? ? B DT 268 C DA 276 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DG 11 N1 ? ? ? 1_555 C DC 5 N3 ? ? B DG 269 C DC 275 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DG 11 N2 ? ? ? 1_555 C DC 5 O2 ? ? B DG 269 C DC 275 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DG 11 O6 ? ? ? 1_555 C DC 5 N4 ? ? B DG 269 C DC 275 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DT 12 N3 ? ? ? 1_555 C DA 4 N1 ? ? B DT 270 C DA 274 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DT 12 O4 ? ? ? 1_555 C DA 4 N6 ? ? B DT 270 C DA 274 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DC 13 N3 ? ? ? 1_555 C DG 3 N1 ? ? B DC 271 C DG 273 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DC 13 N4 ? ? ? 1_555 C DG 3 O6 ? ? B DC 271 C DG 273 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DC 13 O2 ? ? ? 1_555 C DG 3 N2 ? ? B DC 271 C DG 273 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DG 14 N1 ? ? ? 1_555 C DC 2 N3 ? ? B DG 272 C DC 272 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DG 14 N2 ? ? ? 1_555 C DC 2 O2 ? ? B DG 272 C DC 272 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DG 14 O6 ? ? ? 1_555 C DC 2 N4 ? ? B DG 272 C DC 272 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 117 ? A HIS 171 ? 1_555 MN ? D MN . ? A MN 1 ? 1_555 OD1 ? A ASP 119 ? A ASP 173 ? 1_555 99.4 ? 2 NE2 ? A HIS 117 ? A HIS 171 ? 1_555 MN ? D MN . ? A MN 1 ? 1_555 NE2 ? A HIS 182 ? A HIS 236 ? 1_555 90.4 ? 3 OD1 ? A ASP 119 ? A ASP 173 ? 1_555 MN ? D MN . ? A MN 1 ? 1_555 NE2 ? A HIS 182 ? A HIS 236 ? 1_555 100.9 ? 4 NE2 ? A HIS 117 ? A HIS 171 ? 1_555 MN ? D MN . ? A MN 1 ? 1_555 O5 ? E AKG . ? A AKG 259 ? 1_555 89.3 ? 5 OD1 ? A ASP 119 ? A ASP 173 ? 1_555 MN ? D MN . ? A MN 1 ? 1_555 O5 ? E AKG . ? A AKG 259 ? 1_555 165.8 ? 6 NE2 ? A HIS 182 ? A HIS 236 ? 1_555 MN ? D MN . ? A MN 1 ? 1_555 O5 ? E AKG . ? A AKG 259 ? 1_555 90.2 ? 7 NE2 ? A HIS 117 ? A HIS 171 ? 1_555 MN ? D MN . ? A MN 1 ? 1_555 O2 ? E AKG . ? A AKG 259 ? 1_555 90.4 ? 8 OD1 ? A ASP 119 ? A ASP 173 ? 1_555 MN ? D MN . ? A MN 1 ? 1_555 O2 ? E AKG . ? A AKG 259 ? 1_555 91.2 ? 9 NE2 ? A HIS 182 ? A HIS 236 ? 1_555 MN ? D MN . ? A MN 1 ? 1_555 O2 ? E AKG . ? A AKG 259 ? 1_555 167.6 ? 10 O5 ? E AKG . ? A AKG 259 ? 1_555 MN ? D MN . ? A MN 1 ? 1_555 O2 ? E AKG . ? A AKG 259 ? 1_555 77.5 ? 11 NE2 ? A HIS 117 ? A HIS 171 ? 1_555 MN ? D MN . ? A MN 1 ? 1_555 O ? J HOH . ? A HOH 265 ? 1_555 177.4 ? 12 OD1 ? A ASP 119 ? A ASP 173 ? 1_555 MN ? D MN . ? A MN 1 ? 1_555 O ? J HOH . ? A HOH 265 ? 1_555 82.9 ? 13 NE2 ? A HIS 182 ? A HIS 236 ? 1_555 MN ? D MN . ? A MN 1 ? 1_555 O ? J HOH . ? A HOH 265 ? 1_555 90.4 ? 14 O5 ? E AKG . ? A AKG 259 ? 1_555 MN ? D MN . ? A MN 1 ? 1_555 O ? J HOH . ? A HOH 265 ? 1_555 88.2 ? 15 O2 ? E AKG . ? A AKG 259 ? 1_555 MN ? D MN . ? A MN 1 ? 1_555 O ? J HOH . ? A HOH 265 ? 1_555 88.3 ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 HIS 174 A . ? HIS 228 A PRO 175 A ? PRO 229 A 1 2.56 2 HIS 174 A . ? HIS 228 A PRO 175 A ? PRO 229 A 1 1.43 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 2 ? C ? 2 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 4 ? ALA A 8 ? ARG A 58 ALA A 62 A 2 LEU A 11 ? VAL A 17 ? LEU A 65 VAL A 71 A 3 SER A 168 ? MET A 172 ? SER A 222 MET A 226 A 4 ILE A 130 ? GLY A 136 ? ILE A 184 GLY A 190 A 5 ARG A 194 ? ARG A 200 ? ARG A 248 ARG A 254 A 6 PHE A 101 ? TYR A 107 ? PHE A 155 TYR A 161 A 7 LYS A 57 ? GLY A 62 ? LYS A 111 GLY A 116 A 8 LYS A 78 ? PRO A 79 ? LYS A 132 PRO A 133 B 1 ARG A 44 ? VAL A 47 ? ARG A 98 VAL A 101 B 2 LYS A 50 ? SER A 53 ? LYS A 104 SER A 107 C 1 TYR A 68 ? THR A 69 ? TYR A 122 THR A 123 C 2 THR A 74 ? LEU A 75 ? THR A 128 LEU A 129 D 1 ILE A 114 ? HIS A 117 ? ILE A 168 HIS A 171 D 2 TRP A 180 ? LEU A 184 ? TRP A 234 LEU A 238 D 3 ARG A 139 ? HIS A 145 ? ARG A 193 HIS A 199 D 4 VAL A 160 ? LEU A 164 ? VAL A 214 LEU A 218 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 6 ? N ILE A 60 O SER A 13 ? O SER A 67 A 2 3 N THR A 16 ? N THR A 70 O LEU A 169 ? O LEU A 223 A 3 4 O LEU A 170 ? O LEU A 224 N SER A 132 ? N SER A 186 A 4 5 N VAL A 133 ? N VAL A 187 O LEU A 197 ? O LEU A 251 A 5 6 O ASN A 196 ? O ASN A 250 N ASN A 105 ? N ASN A 159 A 6 7 O ILE A 104 ? O ILE A 158 N ALA A 59 ? N ALA A 113 A 7 8 N THR A 60 ? N THR A 114 O LYS A 78 ? O LYS A 132 B 1 2 N VAL A 47 ? N VAL A 101 O LYS A 50 ? O LYS A 104 C 1 2 N TYR A 68 ? N TYR A 122 O LEU A 75 ? O LEU A 129 D 1 2 N HIS A 117 ? N HIS A 171 O HIS A 182 ? O HIS A 236 D 2 3 O TYR A 181 ? O TYR A 235 N ARG A 144 ? N ARG A 198 D 3 4 N PHE A 143 ? N PHE A 197 O VAL A 160 ? O VAL A 214 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MN 1 ? 5 'BINDING SITE FOR RESIDUE MN A 1' AC2 Software A AKG 259 ? 14 'BINDING SITE FOR RESIDUE AKG A 259' AC3 Software A GOL 260 ? 8 'BINDING SITE FOR RESIDUE GOL A 260' AC4 Software A GOL 2 ? 5 'BINDING SITE FOR RESIDUE GOL A 2' AC5 Software A GOL 3 ? 6 'BINDING SITE FOR RESIDUE GOL A 3' AC6 Software B XL3 1 ? 3 'BINDING SITE FOR RESIDUE XL3 B 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 117 ? HIS A 171 . ? 1_555 ? 2 AC1 5 ASP A 119 ? ASP A 173 . ? 1_555 ? 3 AC1 5 HIS A 182 ? HIS A 236 . ? 1_555 ? 4 AC1 5 AKG E . ? AKG A 259 . ? 1_555 ? 5 AC1 5 HOH J . ? HOH A 265 . ? 1_555 ? 6 AC2 14 MN D . ? MN A 1 . ? 1_555 ? 7 AC2 14 LEU A 103 ? LEU A 157 . ? 1_555 ? 8 AC2 14 ASN A 105 ? ASN A 159 . ? 1_555 ? 9 AC2 14 TYR A 107 ? TYR A 161 . ? 1_555 ? 10 AC2 14 ILE A 114 ? ILE A 168 . ? 1_555 ? 11 AC2 14 HIS A 117 ? HIS A 171 . ? 1_555 ? 12 AC2 14 ASP A 119 ? ASP A 173 . ? 1_555 ? 13 AC2 14 HIS A 182 ? HIS A 236 . ? 1_555 ? 14 AC2 14 ARG A 194 ? ARG A 248 . ? 1_555 ? 15 AC2 14 ASN A 196 ? ASN A 250 . ? 1_555 ? 16 AC2 14 ARG A 200 ? ARG A 254 . ? 1_555 ? 17 AC2 14 HOH J . ? HOH A 265 . ? 1_555 ? 18 AC2 14 HOH J . ? HOH A 339 . ? 1_555 ? 19 AC2 14 HOH J . ? HOH A 370 . ? 1_555 ? 20 AC3 8 HOH J . ? HOH A 50 . ? 1_555 ? 21 AC3 8 SER A 53 ? SER A 107 . ? 1_555 ? 22 AC3 8 VAL A 54 ? VAL A 108 . ? 1_555 ? 23 AC3 8 ARG A 56 ? ARG A 110 . ? 1_555 ? 24 AC3 8 LYS A 108 ? LYS A 162 . ? 1_555 ? 25 AC3 8 ASP A 112 ? ASP A 166 . ? 1_555 ? 26 AC3 8 HOH J . ? HOH A 267 . ? 1_555 ? 27 AC3 8 HOH J . ? HOH A 270 . ? 1_555 ? 28 AC4 5 ARG A 4 ? ARG A 58 . ? 1_555 ? 29 AC4 5 HIS A 5 ? HIS A 59 . ? 1_555 ? 30 AC4 5 ILE A 6 ? ILE A 60 . ? 1_555 ? 31 AC4 5 ARG A 7 ? ARG A 61 . ? 1_555 ? 32 AC4 5 HOH J . ? HOH A 378 . ? 1_555 ? 33 AC5 6 VAL A 142 ? VAL A 196 . ? 1_555 ? 34 AC5 6 ARG A 161 ? ARG A 215 . ? 1_555 ? 35 AC5 6 PRO A 185 ? PRO A 239 . ? 1_555 ? 36 AC5 6 ARG A 187 ? ARG A 241 . ? 1_555 ? 37 AC5 6 HOH J . ? HOH A 367 . ? 1_555 ? 38 AC5 6 DA C 4 ? DA C 274 . ? 1_555 ? 39 AC6 3 CYS A 115 ? CYS A 169 . ? 1_555 ? 40 AC6 3 DA B 8 ? DA B 266 . ? 1_555 ? 41 AC6 3 DC B 9 ? DC B 267 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N4 B DC 267 ? ? CA B XL3 1 ? ? 1.48 2 1 SG A CYS 169 ? ? SG B XL3 1 ? ? 2.07 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 C _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 279 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_bond.auth_asym_id_2 C _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 279 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.377 _pdbx_validate_rmsd_bond.bond_target_value 1.419 _pdbx_validate_rmsd_bond.bond_deviation -0.042 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DC 259 ? ? "C1'" B DC 259 ? ? N1 B DC 259 ? ? 112.35 108.30 4.05 0.30 N 2 1 "O4'" B DT 260 ? ? "C1'" B DT 260 ? ? N1 B DT 260 ? ? 111.09 108.30 2.79 0.30 N 3 1 "O4'" B DG 261 ? ? "C1'" B DG 261 ? ? "C2'" B DG 261 ? ? 109.84 106.80 3.04 0.50 N 4 1 C2 B DC 265 ? ? N3 B DC 265 ? ? C4 B DC 265 ? ? 122.95 119.90 3.05 0.50 N 5 1 "O4'" B DA 266 ? ? "C1'" B DA 266 ? ? N9 B DA 266 ? ? 111.70 108.30 3.40 0.30 N 6 1 "O4'" B DT 268 ? ? "C1'" B DT 268 ? ? N1 B DT 268 ? ? 110.58 108.30 2.28 0.30 N 7 1 "O4'" C DG 273 ? ? "C1'" C DG 273 ? ? N9 C DG 273 ? ? 112.85 108.30 4.55 0.30 N 8 1 "O4'" C DT 278 ? ? "C4'" C DT 278 ? ? "C3'" C DT 278 ? ? 100.72 104.50 -3.78 0.40 N 9 1 N3 C DT 278 ? ? C4 C DT 278 ? ? O4 C DT 278 ? ? 124.70 119.90 4.80 0.60 N 10 1 C5 C DT 278 ? ? C4 C DT 278 ? ? O4 C DT 278 ? ? 120.54 124.90 -4.36 0.70 N 11 1 "C3'" C DG 279 ? ? "C2'" C DG 279 ? ? "C1'" C DG 279 ? ? 96.89 102.40 -5.51 0.80 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 110 ? ? 173.54 151.09 2 1 PHE A 124 ? A -133.02 -47.46 3 1 SER A 125 ? ? -140.42 -106.45 4 1 SER A 125 ? ? 93.32 -106.45 5 1 ASP A 163 ? ? -169.24 -169.34 6 1 ARG A 210 ? ? -107.41 60.18 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal AKG C1 C N N 1 AKG O1 O N N 2 AKG O2 O N N 3 AKG C2 C N N 4 AKG O5 O N N 5 AKG C3 C N N 6 AKG C4 C N N 7 AKG C5 C N N 8 AKG O3 O N N 9 AKG O4 O N N 10 AKG HO2 H N N 11 AKG H31 H N N 12 AKG H32 H N N 13 AKG H41 H N N 14 AKG H42 H N N 15 AKG HO4 H N N 16 ALA N N N N 17 ALA CA C N S 18 ALA C C N N 19 ALA O O N N 20 ALA CB C N N 21 ALA OXT O N N 22 ALA H H N N 23 ALA H2 H N N 24 ALA HA H N N 25 ALA HB1 H N N 26 ALA HB2 H N N 27 ALA HB3 H N N 28 ALA HXT H N N 29 ARG N N N N 30 ARG CA C N S 31 ARG C C N N 32 ARG O O N N 33 ARG CB C N N 34 ARG CG C N N 35 ARG CD C N N 36 ARG NE N N N 37 ARG CZ C N N 38 ARG NH1 N N N 39 ARG NH2 N N N 40 ARG OXT O N N 41 ARG H H N N 42 ARG H2 H N N 43 ARG HA H N N 44 ARG HB2 H N N 45 ARG HB3 H N N 46 ARG HG2 H N N 47 ARG HG3 H N N 48 ARG HD2 H N N 49 ARG HD3 H N N 50 ARG HE H N N 51 ARG HH11 H N N 52 ARG HH12 H N N 53 ARG HH21 H N N 54 ARG HH22 H N N 55 ARG HXT H N N 56 ASN N N N N 57 ASN CA C N S 58 ASN C C N N 59 ASN O O N N 60 ASN CB C N N 61 ASN CG C N N 62 ASN OD1 O N N 63 ASN ND2 N N N 64 ASN OXT O N N 65 ASN H H N N 66 ASN H2 H N N 67 ASN HA H N N 68 ASN HB2 H N N 69 ASN HB3 H N N 70 ASN HD21 H N N 71 ASN HD22 H N N 72 ASN HXT H N N 73 ASP N N N N 74 ASP CA C N S 75 ASP C C N N 76 ASP O O N N 77 ASP CB C N N 78 ASP CG C N N 79 ASP OD1 O N N 80 ASP OD2 O N N 81 ASP OXT O N N 82 ASP H H N N 83 ASP H2 H N N 84 ASP HA H N N 85 ASP HB2 H N N 86 ASP HB3 H N N 87 ASP HD2 H N N 88 ASP HXT H N N 89 CYS N N N N 90 CYS CA C N R 91 CYS C C N N 92 CYS O O N N 93 CYS CB C N N 94 CYS SG S N N 95 CYS OXT O N N 96 CYS H H N N 97 CYS H2 H N N 98 CYS HA H N N 99 CYS HB2 H N N 100 CYS HB3 H N N 101 CYS HG H N N 102 CYS HXT H N N 103 DA OP3 O N N 104 DA P P N N 105 DA OP1 O N N 106 DA OP2 O N N 107 DA "O5'" O N N 108 DA "C5'" C N N 109 DA "C4'" C N R 110 DA "O4'" O N N 111 DA "C3'" C N S 112 DA "O3'" O N N 113 DA "C2'" C N N 114 DA "C1'" C N R 115 DA N9 N Y N 116 DA C8 C Y N 117 DA N7 N Y N 118 DA C5 C Y N 119 DA C6 C Y N 120 DA N6 N N N 121 DA N1 N Y N 122 DA C2 C Y N 123 DA N3 N Y N 124 DA C4 C Y N 125 DA HOP3 H N N 126 DA HOP2 H N N 127 DA "H5'" H N N 128 DA "H5''" H N N 129 DA "H4'" H N N 130 DA "H3'" H N N 131 DA "HO3'" H N N 132 DA "H2'" H N N 133 DA "H2''" H N N 134 DA "H1'" H N N 135 DA H8 H N N 136 DA H61 H N N 137 DA H62 H N N 138 DA H2 H N N 139 DC OP3 O N N 140 DC P P N N 141 DC OP1 O N N 142 DC OP2 O N N 143 DC "O5'" O N N 144 DC "C5'" C N N 145 DC "C4'" C N R 146 DC "O4'" O N N 147 DC "C3'" C N S 148 DC "O3'" O N N 149 DC "C2'" C N N 150 DC "C1'" C N R 151 DC N1 N N N 152 DC C2 C N N 153 DC O2 O N N 154 DC N3 N N N 155 DC C4 C N N 156 DC N4 N N N 157 DC C5 C N N 158 DC C6 C N N 159 DC HOP3 H N N 160 DC HOP2 H N N 161 DC "H5'" H N N 162 DC "H5''" H N N 163 DC "H4'" H N N 164 DC "H3'" H N N 165 DC "HO3'" H N N 166 DC "H2'" H N N 167 DC "H2''" H N N 168 DC "H1'" H N N 169 DC H41 H N N 170 DC H42 H N N 171 DC H5 H N N 172 DC H6 H N N 173 DG OP3 O N N 174 DG P P N N 175 DG OP1 O N N 176 DG OP2 O N N 177 DG "O5'" O N N 178 DG "C5'" C N N 179 DG "C4'" C N R 180 DG "O4'" O N N 181 DG "C3'" C N S 182 DG "O3'" O N N 183 DG "C2'" C N N 184 DG "C1'" C N R 185 DG N9 N Y N 186 DG C8 C Y N 187 DG N7 N Y N 188 DG C5 C Y N 189 DG C6 C N N 190 DG O6 O N N 191 DG N1 N N N 192 DG C2 C N N 193 DG N2 N N N 194 DG N3 N N N 195 DG C4 C Y N 196 DG HOP3 H N N 197 DG HOP2 H N N 198 DG "H5'" H N N 199 DG "H5''" H N N 200 DG "H4'" H N N 201 DG "H3'" H N N 202 DG "HO3'" H N N 203 DG "H2'" H N N 204 DG "H2''" H N N 205 DG "H1'" H N N 206 DG H8 H N N 207 DG H1 H N N 208 DG H21 H N N 209 DG H22 H N N 210 DT OP3 O N N 211 DT P P N N 212 DT OP1 O N N 213 DT OP2 O N N 214 DT "O5'" O N N 215 DT "C5'" C N N 216 DT "C4'" C N R 217 DT "O4'" O N N 218 DT "C3'" C N S 219 DT "O3'" O N N 220 DT "C2'" C N N 221 DT "C1'" C N R 222 DT N1 N N N 223 DT C2 C N N 224 DT O2 O N N 225 DT N3 N N N 226 DT C4 C N N 227 DT O4 O N N 228 DT C5 C N N 229 DT C7 C N N 230 DT C6 C N N 231 DT HOP3 H N N 232 DT HOP2 H N N 233 DT "H5'" H N N 234 DT "H5''" H N N 235 DT "H4'" H N N 236 DT "H3'" H N N 237 DT "HO3'" H N N 238 DT "H2'" H N N 239 DT "H2''" H N N 240 DT "H1'" H N N 241 DT H3 H N N 242 DT H71 H N N 243 DT H72 H N N 244 DT H73 H N N 245 DT H6 H N N 246 GLN N N N N 247 GLN CA C N S 248 GLN C C N N 249 GLN O O N N 250 GLN CB C N N 251 GLN CG C N N 252 GLN CD C N N 253 GLN OE1 O N N 254 GLN NE2 N N N 255 GLN OXT O N N 256 GLN H H N N 257 GLN H2 H N N 258 GLN HA H N N 259 GLN HB2 H N N 260 GLN HB3 H N N 261 GLN HG2 H N N 262 GLN HG3 H N N 263 GLN HE21 H N N 264 GLN HE22 H N N 265 GLN HXT H N N 266 GLU N N N N 267 GLU CA C N S 268 GLU C C N N 269 GLU O O N N 270 GLU CB C N N 271 GLU CG C N N 272 GLU CD C N N 273 GLU OE1 O N N 274 GLU OE2 O N N 275 GLU OXT O N N 276 GLU H H N N 277 GLU H2 H N N 278 GLU HA H N N 279 GLU HB2 H N N 280 GLU HB3 H N N 281 GLU HG2 H N N 282 GLU HG3 H N N 283 GLU HE2 H N N 284 GLU HXT H N N 285 GLY N N N N 286 GLY CA C N N 287 GLY C C N N 288 GLY O O N N 289 GLY OXT O N N 290 GLY H H N N 291 GLY H2 H N N 292 GLY HA2 H N N 293 GLY HA3 H N N 294 GLY HXT H N N 295 GOL C1 C N N 296 GOL O1 O N N 297 GOL C2 C N N 298 GOL O2 O N N 299 GOL C3 C N N 300 GOL O3 O N N 301 GOL H11 H N N 302 GOL H12 H N N 303 GOL HO1 H N N 304 GOL H2 H N N 305 GOL HO2 H N N 306 GOL H31 H N N 307 GOL H32 H N N 308 GOL HO3 H N N 309 HIS N N N N 310 HIS CA C N S 311 HIS C C N N 312 HIS O O N N 313 HIS CB C N N 314 HIS CG C Y N 315 HIS ND1 N Y N 316 HIS CD2 C Y N 317 HIS CE1 C Y N 318 HIS NE2 N Y N 319 HIS OXT O N N 320 HIS H H N N 321 HIS H2 H N N 322 HIS HA H N N 323 HIS HB2 H N N 324 HIS HB3 H N N 325 HIS HD1 H N N 326 HIS HD2 H N N 327 HIS HE1 H N N 328 HIS HE2 H N N 329 HIS HXT H N N 330 HOH O O N N 331 HOH H1 H N N 332 HOH H2 H N N 333 ILE N N N N 334 ILE CA C N S 335 ILE C C N N 336 ILE O O N N 337 ILE CB C N S 338 ILE CG1 C N N 339 ILE CG2 C N N 340 ILE CD1 C N N 341 ILE OXT O N N 342 ILE H H N N 343 ILE H2 H N N 344 ILE HA H N N 345 ILE HB H N N 346 ILE HG12 H N N 347 ILE HG13 H N N 348 ILE HG21 H N N 349 ILE HG22 H N N 350 ILE HG23 H N N 351 ILE HD11 H N N 352 ILE HD12 H N N 353 ILE HD13 H N N 354 ILE HXT H N N 355 LEU N N N N 356 LEU CA C N S 357 LEU C C N N 358 LEU O O N N 359 LEU CB C N N 360 LEU CG C N N 361 LEU CD1 C N N 362 LEU CD2 C N N 363 LEU OXT O N N 364 LEU H H N N 365 LEU H2 H N N 366 LEU HA H N N 367 LEU HB2 H N N 368 LEU HB3 H N N 369 LEU HG H N N 370 LEU HD11 H N N 371 LEU HD12 H N N 372 LEU HD13 H N N 373 LEU HD21 H N N 374 LEU HD22 H N N 375 LEU HD23 H N N 376 LEU HXT H N N 377 LYS N N N N 378 LYS CA C N S 379 LYS C C N N 380 LYS O O N N 381 LYS CB C N N 382 LYS CG C N N 383 LYS CD C N N 384 LYS CE C N N 385 LYS NZ N N N 386 LYS OXT O N N 387 LYS H H N N 388 LYS H2 H N N 389 LYS HA H N N 390 LYS HB2 H N N 391 LYS HB3 H N N 392 LYS HG2 H N N 393 LYS HG3 H N N 394 LYS HD2 H N N 395 LYS HD3 H N N 396 LYS HE2 H N N 397 LYS HE3 H N N 398 LYS HZ1 H N N 399 LYS HZ2 H N N 400 LYS HZ3 H N N 401 LYS HXT H N N 402 MET N N N N 403 MET CA C N S 404 MET C C N N 405 MET O O N N 406 MET CB C N N 407 MET CG C N N 408 MET SD S N N 409 MET CE C N N 410 MET OXT O N N 411 MET H H N N 412 MET H2 H N N 413 MET HA H N N 414 MET HB2 H N N 415 MET HB3 H N N 416 MET HG2 H N N 417 MET HG3 H N N 418 MET HE1 H N N 419 MET HE2 H N N 420 MET HE3 H N N 421 MET HXT H N N 422 MN MN MN N N 423 PHE N N N N 424 PHE CA C N S 425 PHE C C N N 426 PHE O O N N 427 PHE CB C N N 428 PHE CG C Y N 429 PHE CD1 C Y N 430 PHE CD2 C Y N 431 PHE CE1 C Y N 432 PHE CE2 C Y N 433 PHE CZ C Y N 434 PHE OXT O N N 435 PHE H H N N 436 PHE H2 H N N 437 PHE HA H N N 438 PHE HB2 H N N 439 PHE HB3 H N N 440 PHE HD1 H N N 441 PHE HD2 H N N 442 PHE HE1 H N N 443 PHE HE2 H N N 444 PHE HZ H N N 445 PHE HXT H N N 446 PRO N N N N 447 PRO CA C N S 448 PRO C C N N 449 PRO O O N N 450 PRO CB C N N 451 PRO CG C N N 452 PRO CD C N N 453 PRO OXT O N N 454 PRO H H N N 455 PRO HA H N N 456 PRO HB2 H N N 457 PRO HB3 H N N 458 PRO HG2 H N N 459 PRO HG3 H N N 460 PRO HD2 H N N 461 PRO HD3 H N N 462 PRO HXT H N N 463 SER N N N N 464 SER CA C N S 465 SER C C N N 466 SER O O N N 467 SER CB C N N 468 SER OG O N N 469 SER OXT O N N 470 SER H H N N 471 SER H2 H N N 472 SER HA H N N 473 SER HB2 H N N 474 SER HB3 H N N 475 SER HG H N N 476 SER HXT H N N 477 THR N N N N 478 THR CA C N S 479 THR C C N N 480 THR O O N N 481 THR CB C N R 482 THR OG1 O N N 483 THR CG2 C N N 484 THR OXT O N N 485 THR H H N N 486 THR H2 H N N 487 THR HA H N N 488 THR HB H N N 489 THR HG1 H N N 490 THR HG21 H N N 491 THR HG22 H N N 492 THR HG23 H N N 493 THR HXT H N N 494 TRP N N N N 495 TRP CA C N S 496 TRP C C N N 497 TRP O O N N 498 TRP CB C N N 499 TRP CG C Y N 500 TRP CD1 C Y N 501 TRP CD2 C Y N 502 TRP NE1 N Y N 503 TRP CE2 C Y N 504 TRP CE3 C Y N 505 TRP CZ2 C Y N 506 TRP CZ3 C Y N 507 TRP CH2 C Y N 508 TRP OXT O N N 509 TRP H H N N 510 TRP H2 H N N 511 TRP HA H N N 512 TRP HB2 H N N 513 TRP HB3 H N N 514 TRP HD1 H N N 515 TRP HE1 H N N 516 TRP HE3 H N N 517 TRP HZ2 H N N 518 TRP HZ3 H N N 519 TRP HH2 H N N 520 TRP HXT H N N 521 TYR N N N N 522 TYR CA C N S 523 TYR C C N N 524 TYR O O N N 525 TYR CB C N N 526 TYR CG C Y N 527 TYR CD1 C Y N 528 TYR CD2 C Y N 529 TYR CE1 C Y N 530 TYR CE2 C Y N 531 TYR CZ C Y N 532 TYR OH O N N 533 TYR OXT O N N 534 TYR H H N N 535 TYR H2 H N N 536 TYR HA H N N 537 TYR HB2 H N N 538 TYR HB3 H N N 539 TYR HD1 H N N 540 TYR HD2 H N N 541 TYR HE1 H N N 542 TYR HE2 H N N 543 TYR HH H N N 544 TYR HXT H N N 545 VAL N N N N 546 VAL CA C N S 547 VAL C C N N 548 VAL O O N N 549 VAL CB C N N 550 VAL CG1 C N N 551 VAL CG2 C N N 552 VAL OXT O N N 553 VAL H H N N 554 VAL H2 H N N 555 VAL HA H N N 556 VAL HB H N N 557 VAL HG11 H N N 558 VAL HG12 H N N 559 VAL HG13 H N N 560 VAL HG21 H N N 561 VAL HG22 H N N 562 VAL HG23 H N N 563 VAL HXT H N N 564 XL3 CA C N N 565 XL3 CB C N N 566 XL3 CC C N N 567 XL3 SG S N N 568 XL3 HA H N N 569 XL3 HAA H N N 570 XL3 HAB H N N 571 XL3 HB H N N 572 XL3 HBA H N N 573 XL3 HC H N N 574 XL3 HCA H N N 575 XL3 HSG H N N 576 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AKG C1 O1 doub N N 1 AKG C1 O2 sing N N 2 AKG C1 C2 sing N N 3 AKG O2 HO2 sing N N 4 AKG C2 O5 doub N N 5 AKG C2 C3 sing N N 6 AKG C3 C4 sing N N 7 AKG C3 H31 sing N N 8 AKG C3 H32 sing N N 9 AKG C4 C5 sing N N 10 AKG C4 H41 sing N N 11 AKG C4 H42 sing N N 12 AKG C5 O3 doub N N 13 AKG C5 O4 sing N N 14 AKG O4 HO4 sing N N 15 ALA N CA sing N N 16 ALA N H sing N N 17 ALA N H2 sing N N 18 ALA CA C sing N N 19 ALA CA CB sing N N 20 ALA CA HA sing N N 21 ALA C O doub N N 22 ALA C OXT sing N N 23 ALA CB HB1 sing N N 24 ALA CB HB2 sing N N 25 ALA CB HB3 sing N N 26 ALA OXT HXT sing N N 27 ARG N CA sing N N 28 ARG N H sing N N 29 ARG N H2 sing N N 30 ARG CA C sing N N 31 ARG CA CB sing N N 32 ARG CA HA sing N N 33 ARG C O doub N N 34 ARG C OXT sing N N 35 ARG CB CG sing N N 36 ARG CB HB2 sing N N 37 ARG CB HB3 sing N N 38 ARG CG CD sing N N 39 ARG CG HG2 sing N N 40 ARG CG HG3 sing N N 41 ARG CD NE sing N N 42 ARG CD HD2 sing N N 43 ARG CD HD3 sing N N 44 ARG NE CZ sing N N 45 ARG NE HE sing N N 46 ARG CZ NH1 sing N N 47 ARG CZ NH2 doub N N 48 ARG NH1 HH11 sing N N 49 ARG NH1 HH12 sing N N 50 ARG NH2 HH21 sing N N 51 ARG NH2 HH22 sing N N 52 ARG OXT HXT sing N N 53 ASN N CA sing N N 54 ASN N H sing N N 55 ASN N H2 sing N N 56 ASN CA C sing N N 57 ASN CA CB sing N N 58 ASN CA HA sing N N 59 ASN C O doub N N 60 ASN C OXT sing N N 61 ASN CB CG sing N N 62 ASN CB HB2 sing N N 63 ASN CB HB3 sing N N 64 ASN CG OD1 doub N N 65 ASN CG ND2 sing N N 66 ASN ND2 HD21 sing N N 67 ASN ND2 HD22 sing N N 68 ASN OXT HXT sing N N 69 ASP N CA sing N N 70 ASP N H sing N N 71 ASP N H2 sing N N 72 ASP CA C sing N N 73 ASP CA CB sing N N 74 ASP CA HA sing N N 75 ASP C O doub N N 76 ASP C OXT sing N N 77 ASP CB CG sing N N 78 ASP CB HB2 sing N N 79 ASP CB HB3 sing N N 80 ASP CG OD1 doub N N 81 ASP CG OD2 sing N N 82 ASP OD2 HD2 sing N N 83 ASP OXT HXT sing N N 84 CYS N CA sing N N 85 CYS N H sing N N 86 CYS N H2 sing N N 87 CYS CA C sing N N 88 CYS CA CB sing N N 89 CYS CA HA sing N N 90 CYS C O doub N N 91 CYS C OXT sing N N 92 CYS CB SG sing N N 93 CYS CB HB2 sing N N 94 CYS CB HB3 sing N N 95 CYS SG HG sing N N 96 CYS OXT HXT sing N N 97 DA OP3 P sing N N 98 DA OP3 HOP3 sing N N 99 DA P OP1 doub N N 100 DA P OP2 sing N N 101 DA P "O5'" sing N N 102 DA OP2 HOP2 sing N N 103 DA "O5'" "C5'" sing N N 104 DA "C5'" "C4'" sing N N 105 DA "C5'" "H5'" sing N N 106 DA "C5'" "H5''" sing N N 107 DA "C4'" "O4'" sing N N 108 DA "C4'" "C3'" sing N N 109 DA "C4'" "H4'" sing N N 110 DA "O4'" "C1'" sing N N 111 DA "C3'" "O3'" sing N N 112 DA "C3'" "C2'" sing N N 113 DA "C3'" "H3'" sing N N 114 DA "O3'" "HO3'" sing N N 115 DA "C2'" "C1'" sing N N 116 DA "C2'" "H2'" sing N N 117 DA "C2'" "H2''" sing N N 118 DA "C1'" N9 sing N N 119 DA "C1'" "H1'" sing N N 120 DA N9 C8 sing Y N 121 DA N9 C4 sing Y N 122 DA C8 N7 doub Y N 123 DA C8 H8 sing N N 124 DA N7 C5 sing Y N 125 DA C5 C6 sing Y N 126 DA C5 C4 doub Y N 127 DA C6 N6 sing N N 128 DA C6 N1 doub Y N 129 DA N6 H61 sing N N 130 DA N6 H62 sing N N 131 DA N1 C2 sing Y N 132 DA C2 N3 doub Y N 133 DA C2 H2 sing N N 134 DA N3 C4 sing Y N 135 DC OP3 P sing N N 136 DC OP3 HOP3 sing N N 137 DC P OP1 doub N N 138 DC P OP2 sing N N 139 DC P "O5'" sing N N 140 DC OP2 HOP2 sing N N 141 DC "O5'" "C5'" sing N N 142 DC "C5'" "C4'" sing N N 143 DC "C5'" "H5'" sing N N 144 DC "C5'" "H5''" sing N N 145 DC "C4'" "O4'" sing N N 146 DC "C4'" "C3'" sing N N 147 DC "C4'" "H4'" sing N N 148 DC "O4'" "C1'" sing N N 149 DC "C3'" "O3'" sing N N 150 DC "C3'" "C2'" sing N N 151 DC "C3'" "H3'" sing N N 152 DC "O3'" "HO3'" sing N N 153 DC "C2'" "C1'" sing N N 154 DC "C2'" "H2'" sing N N 155 DC "C2'" "H2''" sing N N 156 DC "C1'" N1 sing N N 157 DC "C1'" "H1'" sing N N 158 DC N1 C2 sing N N 159 DC N1 C6 sing N N 160 DC C2 O2 doub N N 161 DC C2 N3 sing N N 162 DC N3 C4 doub N N 163 DC C4 N4 sing N N 164 DC C4 C5 sing N N 165 DC N4 H41 sing N N 166 DC N4 H42 sing N N 167 DC C5 C6 doub N N 168 DC C5 H5 sing N N 169 DC C6 H6 sing N N 170 DG OP3 P sing N N 171 DG OP3 HOP3 sing N N 172 DG P OP1 doub N N 173 DG P OP2 sing N N 174 DG P "O5'" sing N N 175 DG OP2 HOP2 sing N N 176 DG "O5'" "C5'" sing N N 177 DG "C5'" "C4'" sing N N 178 DG "C5'" "H5'" sing N N 179 DG "C5'" "H5''" sing N N 180 DG "C4'" "O4'" sing N N 181 DG "C4'" "C3'" sing N N 182 DG "C4'" "H4'" sing N N 183 DG "O4'" "C1'" sing N N 184 DG "C3'" "O3'" sing N N 185 DG "C3'" "C2'" sing N N 186 DG "C3'" "H3'" sing N N 187 DG "O3'" "HO3'" sing N N 188 DG "C2'" "C1'" sing N N 189 DG "C2'" "H2'" sing N N 190 DG "C2'" "H2''" sing N N 191 DG "C1'" N9 sing N N 192 DG "C1'" "H1'" sing N N 193 DG N9 C8 sing Y N 194 DG N9 C4 sing Y N 195 DG C8 N7 doub Y N 196 DG C8 H8 sing N N 197 DG N7 C5 sing Y N 198 DG C5 C6 sing N N 199 DG C5 C4 doub Y N 200 DG C6 O6 doub N N 201 DG C6 N1 sing N N 202 DG N1 C2 sing N N 203 DG N1 H1 sing N N 204 DG C2 N2 sing N N 205 DG C2 N3 doub N N 206 DG N2 H21 sing N N 207 DG N2 H22 sing N N 208 DG N3 C4 sing N N 209 DT OP3 P sing N N 210 DT OP3 HOP3 sing N N 211 DT P OP1 doub N N 212 DT P OP2 sing N N 213 DT P "O5'" sing N N 214 DT OP2 HOP2 sing N N 215 DT "O5'" "C5'" sing N N 216 DT "C5'" "C4'" sing N N 217 DT "C5'" "H5'" sing N N 218 DT "C5'" "H5''" sing N N 219 DT "C4'" "O4'" sing N N 220 DT "C4'" "C3'" sing N N 221 DT "C4'" "H4'" sing N N 222 DT "O4'" "C1'" sing N N 223 DT "C3'" "O3'" sing N N 224 DT "C3'" "C2'" sing N N 225 DT "C3'" "H3'" sing N N 226 DT "O3'" "HO3'" sing N N 227 DT "C2'" "C1'" sing N N 228 DT "C2'" "H2'" sing N N 229 DT "C2'" "H2''" sing N N 230 DT "C1'" N1 sing N N 231 DT "C1'" "H1'" sing N N 232 DT N1 C2 sing N N 233 DT N1 C6 sing N N 234 DT C2 O2 doub N N 235 DT C2 N3 sing N N 236 DT N3 C4 sing N N 237 DT N3 H3 sing N N 238 DT C4 O4 doub N N 239 DT C4 C5 sing N N 240 DT C5 C7 sing N N 241 DT C5 C6 doub N N 242 DT C7 H71 sing N N 243 DT C7 H72 sing N N 244 DT C7 H73 sing N N 245 DT C6 H6 sing N N 246 GLN N CA sing N N 247 GLN N H sing N N 248 GLN N H2 sing N N 249 GLN CA C sing N N 250 GLN CA CB sing N N 251 GLN CA HA sing N N 252 GLN C O doub N N 253 GLN C OXT sing N N 254 GLN CB CG sing N N 255 GLN CB HB2 sing N N 256 GLN CB HB3 sing N N 257 GLN CG CD sing N N 258 GLN CG HG2 sing N N 259 GLN CG HG3 sing N N 260 GLN CD OE1 doub N N 261 GLN CD NE2 sing N N 262 GLN NE2 HE21 sing N N 263 GLN NE2 HE22 sing N N 264 GLN OXT HXT sing N N 265 GLU N CA sing N N 266 GLU N H sing N N 267 GLU N H2 sing N N 268 GLU CA C sing N N 269 GLU CA CB sing N N 270 GLU CA HA sing N N 271 GLU C O doub N N 272 GLU C OXT sing N N 273 GLU CB CG sing N N 274 GLU CB HB2 sing N N 275 GLU CB HB3 sing N N 276 GLU CG CD sing N N 277 GLU CG HG2 sing N N 278 GLU CG HG3 sing N N 279 GLU CD OE1 doub N N 280 GLU CD OE2 sing N N 281 GLU OE2 HE2 sing N N 282 GLU OXT HXT sing N N 283 GLY N CA sing N N 284 GLY N H sing N N 285 GLY N H2 sing N N 286 GLY CA C sing N N 287 GLY CA HA2 sing N N 288 GLY CA HA3 sing N N 289 GLY C O doub N N 290 GLY C OXT sing N N 291 GLY OXT HXT sing N N 292 GOL C1 O1 sing N N 293 GOL C1 C2 sing N N 294 GOL C1 H11 sing N N 295 GOL C1 H12 sing N N 296 GOL O1 HO1 sing N N 297 GOL C2 O2 sing N N 298 GOL C2 C3 sing N N 299 GOL C2 H2 sing N N 300 GOL O2 HO2 sing N N 301 GOL C3 O3 sing N N 302 GOL C3 H31 sing N N 303 GOL C3 H32 sing N N 304 GOL O3 HO3 sing N N 305 HIS N CA sing N N 306 HIS N H sing N N 307 HIS N H2 sing N N 308 HIS CA C sing N N 309 HIS CA CB sing N N 310 HIS CA HA sing N N 311 HIS C O doub N N 312 HIS C OXT sing N N 313 HIS CB CG sing N N 314 HIS CB HB2 sing N N 315 HIS CB HB3 sing N N 316 HIS CG ND1 sing Y N 317 HIS CG CD2 doub Y N 318 HIS ND1 CE1 doub Y N 319 HIS ND1 HD1 sing N N 320 HIS CD2 NE2 sing Y N 321 HIS CD2 HD2 sing N N 322 HIS CE1 NE2 sing Y N 323 HIS CE1 HE1 sing N N 324 HIS NE2 HE2 sing N N 325 HIS OXT HXT sing N N 326 HOH O H1 sing N N 327 HOH O H2 sing N N 328 ILE N CA sing N N 329 ILE N H sing N N 330 ILE N H2 sing N N 331 ILE CA C sing N N 332 ILE CA CB sing N N 333 ILE CA HA sing N N 334 ILE C O doub N N 335 ILE C OXT sing N N 336 ILE CB CG1 sing N N 337 ILE CB CG2 sing N N 338 ILE CB HB sing N N 339 ILE CG1 CD1 sing N N 340 ILE CG1 HG12 sing N N 341 ILE CG1 HG13 sing N N 342 ILE CG2 HG21 sing N N 343 ILE CG2 HG22 sing N N 344 ILE CG2 HG23 sing N N 345 ILE CD1 HD11 sing N N 346 ILE CD1 HD12 sing N N 347 ILE CD1 HD13 sing N N 348 ILE OXT HXT sing N N 349 LEU N CA sing N N 350 LEU N H sing N N 351 LEU N H2 sing N N 352 LEU CA C sing N N 353 LEU CA CB sing N N 354 LEU CA HA sing N N 355 LEU C O doub N N 356 LEU C OXT sing N N 357 LEU CB CG sing N N 358 LEU CB HB2 sing N N 359 LEU CB HB3 sing N N 360 LEU CG CD1 sing N N 361 LEU CG CD2 sing N N 362 LEU CG HG sing N N 363 LEU CD1 HD11 sing N N 364 LEU CD1 HD12 sing N N 365 LEU CD1 HD13 sing N N 366 LEU CD2 HD21 sing N N 367 LEU CD2 HD22 sing N N 368 LEU CD2 HD23 sing N N 369 LEU OXT HXT sing N N 370 LYS N CA sing N N 371 LYS N H sing N N 372 LYS N H2 sing N N 373 LYS CA C sing N N 374 LYS CA CB sing N N 375 LYS CA HA sing N N 376 LYS C O doub N N 377 LYS C OXT sing N N 378 LYS CB CG sing N N 379 LYS CB HB2 sing N N 380 LYS CB HB3 sing N N 381 LYS CG CD sing N N 382 LYS CG HG2 sing N N 383 LYS CG HG3 sing N N 384 LYS CD CE sing N N 385 LYS CD HD2 sing N N 386 LYS CD HD3 sing N N 387 LYS CE NZ sing N N 388 LYS CE HE2 sing N N 389 LYS CE HE3 sing N N 390 LYS NZ HZ1 sing N N 391 LYS NZ HZ2 sing N N 392 LYS NZ HZ3 sing N N 393 LYS OXT HXT sing N N 394 MET N CA sing N N 395 MET N H sing N N 396 MET N H2 sing N N 397 MET CA C sing N N 398 MET CA CB sing N N 399 MET CA HA sing N N 400 MET C O doub N N 401 MET C OXT sing N N 402 MET CB CG sing N N 403 MET CB HB2 sing N N 404 MET CB HB3 sing N N 405 MET CG SD sing N N 406 MET CG HG2 sing N N 407 MET CG HG3 sing N N 408 MET SD CE sing N N 409 MET CE HE1 sing N N 410 MET CE HE2 sing N N 411 MET CE HE3 sing N N 412 MET OXT HXT sing N N 413 PHE N CA sing N N 414 PHE N H sing N N 415 PHE N H2 sing N N 416 PHE CA C sing N N 417 PHE CA CB sing N N 418 PHE CA HA sing N N 419 PHE C O doub N N 420 PHE C OXT sing N N 421 PHE CB CG sing N N 422 PHE CB HB2 sing N N 423 PHE CB HB3 sing N N 424 PHE CG CD1 doub Y N 425 PHE CG CD2 sing Y N 426 PHE CD1 CE1 sing Y N 427 PHE CD1 HD1 sing N N 428 PHE CD2 CE2 doub Y N 429 PHE CD2 HD2 sing N N 430 PHE CE1 CZ doub Y N 431 PHE CE1 HE1 sing N N 432 PHE CE2 CZ sing Y N 433 PHE CE2 HE2 sing N N 434 PHE CZ HZ sing N N 435 PHE OXT HXT sing N N 436 PRO N CA sing N N 437 PRO N CD sing N N 438 PRO N H sing N N 439 PRO CA C sing N N 440 PRO CA CB sing N N 441 PRO CA HA sing N N 442 PRO C O doub N N 443 PRO C OXT sing N N 444 PRO CB CG sing N N 445 PRO CB HB2 sing N N 446 PRO CB HB3 sing N N 447 PRO CG CD sing N N 448 PRO CG HG2 sing N N 449 PRO CG HG3 sing N N 450 PRO CD HD2 sing N N 451 PRO CD HD3 sing N N 452 PRO OXT HXT sing N N 453 SER N CA sing N N 454 SER N H sing N N 455 SER N H2 sing N N 456 SER CA C sing N N 457 SER CA CB sing N N 458 SER CA HA sing N N 459 SER C O doub N N 460 SER C OXT sing N N 461 SER CB OG sing N N 462 SER CB HB2 sing N N 463 SER CB HB3 sing N N 464 SER OG HG sing N N 465 SER OXT HXT sing N N 466 THR N CA sing N N 467 THR N H sing N N 468 THR N H2 sing N N 469 THR CA C sing N N 470 THR CA CB sing N N 471 THR CA HA sing N N 472 THR C O doub N N 473 THR C OXT sing N N 474 THR CB OG1 sing N N 475 THR CB CG2 sing N N 476 THR CB HB sing N N 477 THR OG1 HG1 sing N N 478 THR CG2 HG21 sing N N 479 THR CG2 HG22 sing N N 480 THR CG2 HG23 sing N N 481 THR OXT HXT sing N N 482 TRP N CA sing N N 483 TRP N H sing N N 484 TRP N H2 sing N N 485 TRP CA C sing N N 486 TRP CA CB sing N N 487 TRP CA HA sing N N 488 TRP C O doub N N 489 TRP C OXT sing N N 490 TRP CB CG sing N N 491 TRP CB HB2 sing N N 492 TRP CB HB3 sing N N 493 TRP CG CD1 doub Y N 494 TRP CG CD2 sing Y N 495 TRP CD1 NE1 sing Y N 496 TRP CD1 HD1 sing N N 497 TRP CD2 CE2 doub Y N 498 TRP CD2 CE3 sing Y N 499 TRP NE1 CE2 sing Y N 500 TRP NE1 HE1 sing N N 501 TRP CE2 CZ2 sing Y N 502 TRP CE3 CZ3 doub Y N 503 TRP CE3 HE3 sing N N 504 TRP CZ2 CH2 doub Y N 505 TRP CZ2 HZ2 sing N N 506 TRP CZ3 CH2 sing Y N 507 TRP CZ3 HZ3 sing N N 508 TRP CH2 HH2 sing N N 509 TRP OXT HXT sing N N 510 TYR N CA sing N N 511 TYR N H sing N N 512 TYR N H2 sing N N 513 TYR CA C sing N N 514 TYR CA CB sing N N 515 TYR CA HA sing N N 516 TYR C O doub N N 517 TYR C OXT sing N N 518 TYR CB CG sing N N 519 TYR CB HB2 sing N N 520 TYR CB HB3 sing N N 521 TYR CG CD1 doub Y N 522 TYR CG CD2 sing Y N 523 TYR CD1 CE1 sing Y N 524 TYR CD1 HD1 sing N N 525 TYR CD2 CE2 doub Y N 526 TYR CD2 HD2 sing N N 527 TYR CE1 CZ doub Y N 528 TYR CE1 HE1 sing N N 529 TYR CE2 CZ sing Y N 530 TYR CE2 HE2 sing N N 531 TYR CZ OH sing N N 532 TYR OH HH sing N N 533 TYR OXT HXT sing N N 534 VAL N CA sing N N 535 VAL N H sing N N 536 VAL N H2 sing N N 537 VAL CA C sing N N 538 VAL CA CB sing N N 539 VAL CA HA sing N N 540 VAL C O doub N N 541 VAL C OXT sing N N 542 VAL CB CG1 sing N N 543 VAL CB CG2 sing N N 544 VAL CB HB sing N N 545 VAL CG1 HG11 sing N N 546 VAL CG1 HG12 sing N N 547 VAL CG1 HG13 sing N N 548 VAL CG2 HG21 sing N N 549 VAL CG2 HG22 sing N N 550 VAL CG2 HG23 sing N N 551 VAL OXT HXT sing N N 552 XL3 CA CB sing N N 553 XL3 CA HA sing N N 554 XL3 CA HAA sing N N 555 XL3 CA HAB sing N N 556 XL3 CC CB sing N N 557 XL3 CB HB sing N N 558 XL3 CB HBA sing N N 559 XL3 SG CC sing N N 560 XL3 CC HC sing N N 561 XL3 CC HCA sing N N 562 XL3 SG HSG sing N N 563 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3S5A 'double helix' 3S5A 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DT 2 1_555 C DA 14 1_555 -0.581 -0.358 -0.160 -6.002 -8.668 12.244 1 B_DT260:DA284_C B 260 ? C 284 ? 20 1 1 B DG 3 1_555 C DC 13 1_555 -0.530 -0.460 0.396 -3.080 -13.272 -0.778 2 B_DG261:DC283_C B 261 ? C 283 ? 19 1 1 B DT 4 1_555 C DA 12 1_555 -0.274 -0.281 0.118 -0.949 -6.007 -1.964 3 B_DT262:DA282_C B 262 ? C 282 ? 20 1 1 B DC 5 1_555 C DG 11 1_555 0.082 -0.116 -0.084 2.514 -7.613 0.533 4 B_DC263:DG281_C B 263 ? C 281 ? 19 1 1 B DT 6 1_555 C DA 10 1_555 -0.041 -0.174 0.117 5.735 -7.368 4.065 5 B_DT264:DA280_C B 264 ? C 280 ? 20 1 1 B DC 7 1_555 C DG 9 1_555 0.321 -0.168 -0.183 23.554 -17.778 -2.233 6 B_DC265:DG279_C B 265 ? C 279 ? 19 1 1 B DA 8 1_555 C DT 8 1_555 0.206 -0.153 -0.304 -19.314 6.802 0.568 7 B_DA266:DT278_C B 266 ? C 278 ? 20 1 1 B DC 9 1_555 C DG 7 1_555 0.184 -0.130 0.469 -12.084 -13.171 -0.580 8 B_DC267:DG277_C B 267 ? C 277 ? 19 1 1 B DT 10 1_555 C DA 6 1_555 -0.025 -0.142 0.244 -4.255 -9.597 -2.083 9 B_DT268:DA276_C B 268 ? C 276 ? 20 1 1 B DG 11 1_555 C DC 5 1_555 -0.141 -0.094 0.117 -0.912 -10.138 2.430 10 B_DG269:DC275_C B 269 ? C 275 ? 19 1 1 B DT 12 1_555 C DA 4 1_555 -0.134 -0.268 0.136 -3.277 -10.086 -4.196 11 B_DT270:DA274_C B 270 ? C 274 ? 20 1 1 B DC 13 1_555 C DG 3 1_555 0.262 -0.268 0.032 -7.506 -7.565 -2.693 12 B_DC271:DG273_C B 271 ? C 273 ? 19 1 1 B DG 14 1_555 C DC 2 1_555 0.069 -0.149 -0.174 -5.057 -8.340 -3.746 13 B_DG272:DC272_C B 272 ? C 272 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DT 2 1_555 C DA 14 1_555 B DG 3 1_555 C DC 13 1_555 0.646 1.130 3.214 -7.473 6.584 40.139 0.899 -1.714 3.188 9.418 10.690 41.307 1 BB_DT260DG261:DC283DA284_CC B 260 ? C 284 ? B 261 ? C 283 ? 1 B DG 3 1_555 C DC 13 1_555 B DT 4 1_555 C DA 12 1_555 -0.939 -0.831 3.273 3.422 2.898 32.441 -1.961 2.241 3.077 5.156 -6.089 32.741 2 BB_DG261DT262:DA282DC283_CC B 261 ? C 283 ? B 262 ? C 282 ? 1 B DT 4 1_555 C DA 12 1_555 B DC 5 1_555 C DG 11 1_555 0.250 -0.169 3.184 2.700 1.854 36.384 -0.519 -0.036 3.182 2.962 -4.313 36.526 3 BB_DT262DC263:DG281DA282_CC B 262 ? C 282 ? B 263 ? C 281 ? 1 B DC 5 1_555 C DG 11 1_555 B DT 6 1_555 C DA 10 1_555 0.195 -0.209 3.235 0.986 7.382 31.456 -1.663 -0.179 3.112 13.383 -1.787 32.304 4 BB_DC263DT264:DA280DG281_CC B 263 ? C 281 ? B 264 ? C 280 ? 1 B DT 6 1_555 C DA 10 1_555 B DC 7 1_555 C DG 9 1_555 0.007 1.900 2.912 8.993 0.633 35.979 2.914 1.071 2.863 1.005 -14.284 37.055 5 BB_DT264DC265:DG279DA280_CC B 264 ? C 280 ? B 265 ? C 279 ? 1 B DC 7 1_555 C DG 9 1_555 B DA 8 1_555 C DT 8 1_555 0.103 0.850 6.763 -12.959 35.770 17.681 -7.423 -3.265 3.602 62.029 22.472 41.814 6 BB_DC265DA266:DT278DG279_CC B 265 ? C 279 ? B 266 ? C 278 ? 1 B DA 8 1_555 C DT 8 1_555 B DC 9 1_555 C DG 7 1_555 -0.828 -0.062 3.388 -4.223 -14.961 35.838 1.825 0.700 3.235 -23.025 6.500 38.962 7 BB_DA266DC267:DG277DT278_CC B 266 ? C 278 ? B 267 ? C 277 ? 1 B DC 9 1_555 C DG 7 1_555 B DT 10 1_555 C DA 6 1_555 -0.229 -0.334 3.077 3.023 4.591 32.281 -1.329 0.892 2.970 8.183 -5.388 32.733 8 BB_DC267DT268:DA276DG277_CC B 267 ? C 277 ? B 268 ? C 276 ? 1 B DT 10 1_555 C DA 6 1_555 B DG 11 1_555 C DC 5 1_555 0.137 0.006 3.221 -0.859 6.728 34.991 -0.952 -0.347 3.164 11.060 1.412 35.622 9 BB_DT268DG269:DC275DA276_CC B 268 ? C 276 ? B 269 ? C 275 ? 1 B DG 11 1_555 C DC 5 1_555 B DT 12 1_555 C DA 4 1_555 -0.721 -0.432 3.400 -1.332 1.128 32.133 -0.989 1.052 3.410 2.037 2.404 32.180 10 BB_DG269DT270:DA274DC275_CC B 269 ? C 275 ? B 270 ? C 274 ? 1 B DT 12 1_555 C DA 4 1_555 B DC 13 1_555 C DG 3 1_555 0.616 0.098 3.355 4.510 2.613 41.329 -0.148 -0.373 3.401 3.685 -6.359 41.642 11 BB_DT270DC271:DG273DA274_CC B 270 ? C 274 ? B 271 ? C 273 ? 1 B DC 13 1_555 C DG 3 1_555 B DG 14 1_555 C DC 2 1_555 -0.056 -0.586 3.194 5.112 9.848 24.800 -3.595 1.337 2.704 21.602 -11.214 27.134 12 BB_DC271DG272:DC272DG273_CC B 271 ? C 273 ? B 272 ? C 272 ? # _atom_sites.entry_id 3S5A _atom_sites.fract_transf_matrix[1][1] 0.021754 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000198 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016499 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015247 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MN N O P S # loop_