data_3S5O # _entry.id 3S5O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3S5O RCSB RCSB065792 WWPDB D_1000065792 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3S5N _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3S5O _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-05-23 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Riedel, T.J.' 1 'Lowther, W.T.' 2 # _citation.id primary _citation.title ;Structural and Biochemical Studies of Human 4-hydroxy-2-oxoglutarate Aldolase: Implications for Hydroxyproline Metabolism in Primary Hyperoxaluria. ; _citation.journal_abbrev 'Plos One' _citation.journal_volume 6 _citation.page_first e26021 _citation.page_last e26021 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21998747 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0026021 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Riedel, T.J.' 1 primary 'Johnson, L.C.' 2 primary 'Knight, J.' 3 primary 'Hantgan, R.R.' 4 primary 'Holmes, R.P.' 5 primary 'Lowther, W.T.' 6 # _cell.entry_id 3S5O _cell.length_a 141.230 _cell.length_b 141.230 _cell.length_c 108.388 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3S5O _symmetry.space_group_name_H-M 'P 64 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '4-hydroxy-2-oxoglutarate aldolase, mitochondrial' 32979.773 1 4.1.3.16 ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 6 ? ? ? ? 3 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 4 water nat water 18.015 211 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Dihydrodipicolinate synthase-like, DHDPS-like protein, 2-keto-4-hydroxyglutarate aldolase, KHG-aldolase, Protein 569272' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GPLGSASGEGKKVDIAGIYPPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAM PKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPV DAVVTLSQHPNIVGM(KPI)DSGGDVTRIGLIVHKTRKQDFQVLAGSAGFLMASYALGAVGGVCALANVLGAQVCQLERL CCTGQWEDAQKLQHRLIEPNAAVTRRFGIPGLKKIMDWFGYYGGPCRAPLQELSPAEEEALRMDFTSNGWL ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSASGEGKKVDIAGIYPPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAM PKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPV DAVVTLSQHPNIVGMKDSGGDVTRIGLIVHKTRKQDFQVLAGSAGFLMASYALGAVGGVCALANVLGAQVCQLERLCCTG QWEDAQKLQHRLIEPNAAVTRRFGIPGLKKIMDWFGYYGGPCRAPLQELSPAEEEALRMDFTSNGWL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 ALA n 1 7 SER n 1 8 GLY n 1 9 GLU n 1 10 GLY n 1 11 LYS n 1 12 LYS n 1 13 VAL n 1 14 ASP n 1 15 ILE n 1 16 ALA n 1 17 GLY n 1 18 ILE n 1 19 TYR n 1 20 PRO n 1 21 PRO n 1 22 VAL n 1 23 THR n 1 24 THR n 1 25 PRO n 1 26 PHE n 1 27 THR n 1 28 ALA n 1 29 THR n 1 30 ALA n 1 31 GLU n 1 32 VAL n 1 33 ASP n 1 34 TYR n 1 35 GLY n 1 36 LYS n 1 37 LEU n 1 38 GLU n 1 39 GLU n 1 40 ASN n 1 41 LEU n 1 42 HIS n 1 43 LYS n 1 44 LEU n 1 45 GLY n 1 46 THR n 1 47 PHE n 1 48 PRO n 1 49 PHE n 1 50 ARG n 1 51 GLY n 1 52 PHE n 1 53 VAL n 1 54 VAL n 1 55 GLN n 1 56 GLY n 1 57 SER n 1 58 ASN n 1 59 GLY n 1 60 GLU n 1 61 PHE n 1 62 PRO n 1 63 PHE n 1 64 LEU n 1 65 THR n 1 66 SER n 1 67 SER n 1 68 GLU n 1 69 ARG n 1 70 LEU n 1 71 GLU n 1 72 VAL n 1 73 VAL n 1 74 SER n 1 75 ARG n 1 76 VAL n 1 77 ARG n 1 78 GLN n 1 79 ALA n 1 80 MET n 1 81 PRO n 1 82 LYS n 1 83 ASN n 1 84 ARG n 1 85 LEU n 1 86 LEU n 1 87 LEU n 1 88 ALA n 1 89 GLY n 1 90 SER n 1 91 GLY n 1 92 CYS n 1 93 GLU n 1 94 SER n 1 95 THR n 1 96 GLN n 1 97 ALA n 1 98 THR n 1 99 VAL n 1 100 GLU n 1 101 MET n 1 102 THR n 1 103 VAL n 1 104 SER n 1 105 MET n 1 106 ALA n 1 107 GLN n 1 108 VAL n 1 109 GLY n 1 110 ALA n 1 111 ASP n 1 112 ALA n 1 113 ALA n 1 114 MET n 1 115 VAL n 1 116 VAL n 1 117 THR n 1 118 PRO n 1 119 CYS n 1 120 TYR n 1 121 TYR n 1 122 ARG n 1 123 GLY n 1 124 ARG n 1 125 MET n 1 126 SER n 1 127 SER n 1 128 ALA n 1 129 ALA n 1 130 LEU n 1 131 ILE n 1 132 HIS n 1 133 HIS n 1 134 TYR n 1 135 THR n 1 136 LYS n 1 137 VAL n 1 138 ALA n 1 139 ASP n 1 140 LEU n 1 141 SER n 1 142 PRO n 1 143 ILE n 1 144 PRO n 1 145 VAL n 1 146 VAL n 1 147 LEU n 1 148 TYR n 1 149 SER n 1 150 VAL n 1 151 PRO n 1 152 ALA n 1 153 ASN n 1 154 THR n 1 155 GLY n 1 156 LEU n 1 157 ASP n 1 158 LEU n 1 159 PRO n 1 160 VAL n 1 161 ASP n 1 162 ALA n 1 163 VAL n 1 164 VAL n 1 165 THR n 1 166 LEU n 1 167 SER n 1 168 GLN n 1 169 HIS n 1 170 PRO n 1 171 ASN n 1 172 ILE n 1 173 VAL n 1 174 GLY n 1 175 MET n 1 176 KPI n 1 177 ASP n 1 178 SER n 1 179 GLY n 1 180 GLY n 1 181 ASP n 1 182 VAL n 1 183 THR n 1 184 ARG n 1 185 ILE n 1 186 GLY n 1 187 LEU n 1 188 ILE n 1 189 VAL n 1 190 HIS n 1 191 LYS n 1 192 THR n 1 193 ARG n 1 194 LYS n 1 195 GLN n 1 196 ASP n 1 197 PHE n 1 198 GLN n 1 199 VAL n 1 200 LEU n 1 201 ALA n 1 202 GLY n 1 203 SER n 1 204 ALA n 1 205 GLY n 1 206 PHE n 1 207 LEU n 1 208 MET n 1 209 ALA n 1 210 SER n 1 211 TYR n 1 212 ALA n 1 213 LEU n 1 214 GLY n 1 215 ALA n 1 216 VAL n 1 217 GLY n 1 218 GLY n 1 219 VAL n 1 220 CYS n 1 221 ALA n 1 222 LEU n 1 223 ALA n 1 224 ASN n 1 225 VAL n 1 226 LEU n 1 227 GLY n 1 228 ALA n 1 229 GLN n 1 230 VAL n 1 231 CYS n 1 232 GLN n 1 233 LEU n 1 234 GLU n 1 235 ARG n 1 236 LEU n 1 237 CYS n 1 238 CYS n 1 239 THR n 1 240 GLY n 1 241 GLN n 1 242 TRP n 1 243 GLU n 1 244 ASP n 1 245 ALA n 1 246 GLN n 1 247 LYS n 1 248 LEU n 1 249 GLN n 1 250 HIS n 1 251 ARG n 1 252 LEU n 1 253 ILE n 1 254 GLU n 1 255 PRO n 1 256 ASN n 1 257 ALA n 1 258 ALA n 1 259 VAL n 1 260 THR n 1 261 ARG n 1 262 ARG n 1 263 PHE n 1 264 GLY n 1 265 ILE n 1 266 PRO n 1 267 GLY n 1 268 LEU n 1 269 LYS n 1 270 LYS n 1 271 ILE n 1 272 MET n 1 273 ASP n 1 274 TRP n 1 275 PHE n 1 276 GLY n 1 277 TYR n 1 278 TYR n 1 279 GLY n 1 280 GLY n 1 281 PRO n 1 282 CYS n 1 283 ARG n 1 284 ALA n 1 285 PRO n 1 286 LEU n 1 287 GLN n 1 288 GLU n 1 289 LEU n 1 290 SER n 1 291 PRO n 1 292 ALA n 1 293 GLU n 1 294 GLU n 1 295 GLU n 1 296 ALA n 1 297 LEU n 1 298 ARG n 1 299 MET n 1 300 ASP n 1 301 PHE n 1 302 THR n 1 303 SER n 1 304 ASN n 1 305 GLY n 1 306 TRP n 1 307 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'C10orf65, DHDPSL, HOGA1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMal _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HOGA1_HUMAN _struct_ref.pdbx_db_accession Q86XE5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ASGEGKKVDIAGIYPPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRL LLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVT LSQHPNIVGMKDSGGDVTRIGLIVHKTRKQDFQVLAGSAGFLMASYALGAVGGVCALANVLGAQVCQLERLCCTGQWEDA QKLQHRLIEPNAAVTRRFGIPGLKKIMDWFGYYGGPCRAPLQELSPAEEEALRMDFTSNGWL ; _struct_ref.pdbx_align_begin 26 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3S5O _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 307 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q86XE5 _struct_ref_seq.db_align_beg 26 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 327 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 26 _struct_ref_seq.pdbx_auth_seq_align_end 327 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3S5O GLY A 1 ? UNP Q86XE5 ? ? 'EXPRESSION TAG' 21 1 1 3S5O PRO A 2 ? UNP Q86XE5 ? ? 'EXPRESSION TAG' 22 2 1 3S5O LEU A 3 ? UNP Q86XE5 ? ? 'EXPRESSION TAG' 23 3 1 3S5O GLY A 4 ? UNP Q86XE5 ? ? 'EXPRESSION TAG' 24 4 1 3S5O SER A 5 ? UNP Q86XE5 ? ? 'EXPRESSION TAG' 25 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 KPI 'L-peptide linking' n '(2S)-2-amino-6-[(1-hydroxy-1-oxo-propan-2-ylidene)amino]hexanoic acid' ? 'C9 H16 N2 O4' 216.234 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3S5O _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 4.75 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 74.12 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details 'PEG 3350, KSCN, Bis tris Propane, TCEP, Ethelyene glycol, pH 7.5, vapor diffusion, hanging drop, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2009-07-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH3R' _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3S5O _reflns.d_resolution_high 1.970 _reflns.d_resolution_low 35.170 _reflns.number_obs 45370 _reflns.pdbx_scaling_rejects 4740 _reflns.pdbx_Rmerge_I_obs 0.050 _reflns.pdbx_netI_over_sigmaI 20.800 _reflns.pdbx_chi_squared 0.910 _reflns.pdbx_redundancy 13.820 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.970 2.040 ? 54992 ? 0.354 5.700 ? 1.380 12.300 ? 4465 100.000 1 1 2.040 2.120 ? 61199 ? 0.276 7.100 ? 1.250 13.650 ? 4474 100.000 2 1 2.120 2.220 ? 61460 ? 0.194 9.500 ? 1.100 13.760 ? 4449 100.000 3 1 2.220 2.340 ? 62783 ? 0.153 11.300 ? 1.010 13.880 ? 4493 100.000 4 1 2.340 2.480 ? 63590 ? 0.119 14.100 ? 0.940 14.010 ? 4501 100.000 5 1 2.480 2.670 ? 64276 ? 0.092 17.400 ? 0.850 14.180 ? 4495 99.900 6 1 2.670 2.940 ? 65163 ? 0.067 21.100 ? 0.750 14.230 ? 4551 100.000 7 1 2.940 3.370 ? 65393 ? 0.047 28.700 ? 0.670 14.300 ? 4532 99.700 8 1 3.370 4.240 ? 66346 ? 0.035 38.900 ? 0.640 14.230 ? 4610 99.800 9 1 4.240 35.170 ? 66768 ? 0.029 49.800 ? 0.660 13.700 ? 4800 99.200 10 1 # _refine.entry_id 3S5O _refine.ls_d_res_high 1.9700 _refine.ls_d_res_low 34.648 _refine.pdbx_ls_sigma_F 2 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.6900 _refine.ls_number_reflns_obs 45315 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1973 _refine.ls_R_factor_R_work 0.1963 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2159 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 2287 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 29.8862 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.5200 _refine.aniso_B[2][2] -0.5200 _refine.aniso_B[3][3] 0.7800 _refine.aniso_B[1][2] -0.2600 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9530 _refine.correlation_coeff_Fo_to_Fc_free 0.9500 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.1040 _refine.overall_SU_ML 0.0670 _refine.overall_SU_B 2.3300 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 65.920 _refine.B_iso_min 18.120 _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.108 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2246 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 211 _refine_hist.number_atoms_total 2482 _refine_hist.d_res_high 1.9700 _refine_hist.d_res_low 34.648 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 2330 0.014 0.022 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 3156 1.429 1.972 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 299 5.712 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 94 40.151 23.617 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 370 14.222 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 15 16.999 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 357 0.107 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1754 0.006 0.021 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1476 0.707 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 2374 1.327 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 854 2.277 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 779 3.771 4.500 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.9700 _refine_ls_shell.d_res_low 2.0210 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.9700 _refine_ls_shell.number_reflns_R_work 3119 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2720 _refine_ls_shell.R_factor_R_free 0.3180 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 194 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 3313 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3S5O _struct.title 'Crystal Structure of Human 4-hydroxy-2-oxoglutarate Aldolase Bound to Pyruvate' _struct.pdbx_descriptor '4-hydroxy-2-oxoglutarate aldolase, mitochondrial (E.C.4.1.3.16)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3S5O _struct_keywords.text 'aldolase, beta barrel, Schiff base, hydroxyproline metabolism, LYASE' _struct_keywords.pdbx_keywords LYASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 3 ? I N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 33 ? GLY A 45 ? ASP A 53 GLY A 65 1 ? 13 HELX_P HELX_P2 2 GLY A 56 ? LEU A 64 ? GLY A 76 LEU A 84 5 ? 9 HELX_P HELX_P3 3 THR A 65 ? ALA A 79 ? THR A 85 ALA A 99 1 ? 15 HELX_P HELX_P4 4 SER A 94 ? VAL A 108 ? SER A 114 VAL A 128 1 ? 15 HELX_P HELX_P5 5 TYR A 121 ? MET A 125 ? TYR A 141 MET A 145 5 ? 5 HELX_P HELX_P6 6 SER A 126 ? SER A 141 ? SER A 146 SER A 161 1 ? 16 HELX_P HELX_P7 7 VAL A 150 ? GLY A 155 ? VAL A 170 GLY A 175 1 ? 6 HELX_P HELX_P8 8 PRO A 159 ? GLN A 168 ? PRO A 179 GLN A 188 1 ? 10 HELX_P HELX_P9 9 ASP A 181 ? THR A 192 ? ASP A 201 THR A 212 1 ? 12 HELX_P HELX_P10 10 SER A 203 ? GLY A 205 ? SER A 223 GLY A 225 5 ? 3 HELX_P HELX_P11 11 PHE A 206 ? GLY A 214 ? PHE A 226 GLY A 234 1 ? 9 HELX_P HELX_P12 12 ALA A 221 ? VAL A 225 ? ALA A 241 VAL A 245 5 ? 5 HELX_P HELX_P13 13 LEU A 226 ? THR A 239 ? LEU A 246 THR A 259 1 ? 14 HELX_P HELX_P14 14 GLN A 241 ? VAL A 259 ? GLN A 261 VAL A 279 1 ? 19 HELX_P HELX_P15 15 PHE A 263 ? GLY A 276 ? PHE A 283 GLY A 296 1 ? 14 HELX_P HELX_P16 16 SER A 290 ? SER A 303 ? SER A 310 SER A 323 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MET 175 C ? ? ? 1_555 A KPI 176 N ? ? A MET 195 A KPI 196 1_555 ? ? ? ? ? ? ? 1.506 ? covale2 covale ? ? A KPI 176 C ? ? ? 1_555 A ASP 177 N ? ? A KPI 196 A ASP 197 1_555 ? ? ? ? ? ? ? 1.452 ? metalc1 metalc ? ? A ILE 172 O ? ? ? 1_555 H K . K ? ? A ILE 192 A K 328 1_555 ? ? ? ? ? ? ? 2.564 ? metalc2 metalc ? ? A SER 167 O ? ? ? 1_555 H K . K ? ? A SER 187 A K 328 1_555 ? ? ? ? ? ? ? 2.682 ? metalc3 metalc ? ? A HIS 169 O ? ? ? 1_555 H K . K ? ? A HIS 189 A K 328 1_555 ? ? ? ? ? ? ? 2.690 ? metalc4 metalc ? ? A ASP 196 O ? ? ? 1_555 H K . K ? ? A ASP 216 A K 328 1_555 ? ? ? ? ? ? ? 2.711 ? metalc5 metalc ? ? H K . K ? ? ? 1_555 I HOH . O ? ? A K 328 A HOH 371 1_555 ? ? ? ? ? ? ? 2.734 ? metalc6 metalc ? ? H K . K ? ? ? 1_555 I HOH . O ? ? A K 328 A HOH 342 1_555 ? ? ? ? ? ? ? 2.957 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ALA _struct_mon_prot_cis.label_seq_id 284 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ALA _struct_mon_prot_cis.auth_seq_id 304 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 285 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 305 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 15.45 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 17 ? TYR A 19 ? GLY A 37 TYR A 39 A 2 GLY A 217 ? VAL A 219 ? GLY A 237 VAL A 239 B 1 GLY A 51 ? VAL A 54 ? GLY A 71 VAL A 74 B 2 LEU A 85 ? GLY A 89 ? LEU A 105 GLY A 109 B 3 ALA A 112 ? VAL A 116 ? ALA A 132 VAL A 136 B 4 VAL A 145 ? SER A 149 ? VAL A 165 SER A 169 B 5 ILE A 172 ? ASP A 177 ? ILE A 192 ASP A 197 B 6 GLN A 198 ? ALA A 201 ? GLN A 218 ALA A 221 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 19 ? N TYR A 39 O GLY A 218 ? O GLY A 238 B 1 2 N VAL A 54 ? N VAL A 74 O GLY A 89 ? O GLY A 109 B 2 3 N ALA A 88 ? N ALA A 108 O ALA A 112 ? O ALA A 132 B 3 4 N ALA A 113 ? N ALA A 133 O VAL A 146 ? O VAL A 166 B 4 5 N LEU A 147 ? N LEU A 167 O KPI A 176 ? O KPI A 196 B 5 6 N MET A 175 ? N MET A 195 O LEU A 200 ? O LEU A 220 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO A 1' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE EDO A 2' AC3 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE EDO A 3' AC4 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE EDO A 4' AC5 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EDO A 6' AC6 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE K A 328' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLU A 39 ? GLU A 59 . ? 1_555 ? 2 AC1 4 LYS A 43 ? LYS A 63 . ? 1_555 ? 3 AC1 4 HOH I . ? HOH A 527 . ? 1_555 ? 4 AC1 4 HOH I . ? HOH A 533 . ? 1_555 ? 5 AC2 6 LYS A 43 ? LYS A 63 . ? 1_555 ? 6 AC2 6 PHE A 275 ? PHE A 295 . ? 1_555 ? 7 AC2 6 GLY A 276 ? GLY A 296 . ? 1_555 ? 8 AC2 6 TYR A 277 ? TYR A 297 . ? 1_555 ? 9 AC2 6 HOH I . ? HOH A 526 . ? 1_555 ? 10 AC2 6 HOH I . ? HOH A 527 . ? 1_555 ? 11 AC3 8 EDO G . ? EDO A 6 . ? 1_555 ? 12 AC3 8 TYR A 121 ? TYR A 141 . ? 4_665 ? 13 AC3 8 ARG A 124 ? ARG A 144 . ? 4_665 ? 14 AC3 8 GLY A 264 ? GLY A 284 . ? 1_555 ? 15 AC3 8 ILE A 265 ? ILE A 285 . ? 1_555 ? 16 AC3 8 PRO A 266 ? PRO A 286 . ? 1_555 ? 17 AC3 8 HOH I . ? HOH A 478 . ? 4_665 ? 18 AC3 8 HOH I . ? HOH A 529 . ? 1_555 ? 19 AC4 8 VAL A 22 ? VAL A 42 . ? 1_555 ? 20 AC4 8 THR A 23 ? THR A 43 . ? 1_555 ? 21 AC4 8 PRO A 25 ? PRO A 45 . ? 1_555 ? 22 AC4 8 LEU A 37 ? LEU A 57 . ? 1_555 ? 23 AC4 8 ASN A 40 ? ASN A 60 . ? 1_555 ? 24 AC4 8 LEU A 44 ? LEU A 64 . ? 1_555 ? 25 AC4 8 ASN A 224 ? ASN A 244 . ? 1_555 ? 26 AC4 8 MET A 272 ? MET A 292 . ? 1_555 ? 27 AC5 5 EDO D . ? EDO A 3 . ? 1_555 ? 28 AC5 5 SER A 57 ? SER A 77 . ? 1_555 ? 29 AC5 5 ASN A 153 ? ASN A 173 . ? 1_555 ? 30 AC5 5 HOH I . ? HOH A 341 . ? 1_555 ? 31 AC5 5 HOH I . ? HOH A 537 . ? 1_555 ? 32 AC6 6 SER A 167 ? SER A 187 . ? 1_555 ? 33 AC6 6 HIS A 169 ? HIS A 189 . ? 1_555 ? 34 AC6 6 ILE A 172 ? ILE A 192 . ? 1_555 ? 35 AC6 6 ASP A 196 ? ASP A 216 . ? 1_555 ? 36 AC6 6 HOH I . ? HOH A 342 . ? 1_555 ? 37 AC6 6 HOH I . ? HOH A 371 . ? 1_555 ? # _atom_sites.entry_id 3S5O _atom_sites.fract_transf_matrix[1][1] 0.007081 _atom_sites.fract_transf_matrix[1][2] 0.004088 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008176 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009226 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 21 ? ? ? A . n A 1 2 PRO 2 22 ? ? ? A . n A 1 3 LEU 3 23 ? ? ? A . n A 1 4 GLY 4 24 ? ? ? A . n A 1 5 SER 5 25 ? ? ? A . n A 1 6 ALA 6 26 ? ? ? A . n A 1 7 SER 7 27 ? ? ? A . n A 1 8 GLY 8 28 ? ? ? A . n A 1 9 GLU 9 29 ? ? ? A . n A 1 10 GLY 10 30 ? ? ? A . n A 1 11 LYS 11 31 ? ? ? A . n A 1 12 LYS 12 32 32 LYS LYS A . n A 1 13 VAL 13 33 33 VAL VAL A . n A 1 14 ASP 14 34 34 ASP ASP A . n A 1 15 ILE 15 35 35 ILE ILE A . n A 1 16 ALA 16 36 36 ALA ALA A . n A 1 17 GLY 17 37 37 GLY GLY A . n A 1 18 ILE 18 38 38 ILE ILE A . n A 1 19 TYR 19 39 39 TYR TYR A . n A 1 20 PRO 20 40 40 PRO PRO A . n A 1 21 PRO 21 41 41 PRO PRO A . n A 1 22 VAL 22 42 42 VAL VAL A . n A 1 23 THR 23 43 43 THR THR A . n A 1 24 THR 24 44 44 THR THR A . n A 1 25 PRO 25 45 45 PRO PRO A . n A 1 26 PHE 26 46 46 PHE PHE A . n A 1 27 THR 27 47 47 THR THR A . n A 1 28 ALA 28 48 48 ALA ALA A . n A 1 29 THR 29 49 49 THR THR A . n A 1 30 ALA 30 50 50 ALA ALA A . n A 1 31 GLU 31 51 51 GLU GLU A . n A 1 32 VAL 32 52 52 VAL VAL A . n A 1 33 ASP 33 53 53 ASP ASP A . n A 1 34 TYR 34 54 54 TYR TYR A . n A 1 35 GLY 35 55 55 GLY GLY A . n A 1 36 LYS 36 56 56 LYS LYS A . n A 1 37 LEU 37 57 57 LEU LEU A . n A 1 38 GLU 38 58 58 GLU GLU A . n A 1 39 GLU 39 59 59 GLU GLU A . n A 1 40 ASN 40 60 60 ASN ASN A . n A 1 41 LEU 41 61 61 LEU LEU A . n A 1 42 HIS 42 62 62 HIS HIS A . n A 1 43 LYS 43 63 63 LYS LYS A . n A 1 44 LEU 44 64 64 LEU LEU A . n A 1 45 GLY 45 65 65 GLY GLY A . n A 1 46 THR 46 66 66 THR THR A . n A 1 47 PHE 47 67 67 PHE PHE A . n A 1 48 PRO 48 68 68 PRO PRO A . n A 1 49 PHE 49 69 69 PHE PHE A . n A 1 50 ARG 50 70 70 ARG ARG A . n A 1 51 GLY 51 71 71 GLY GLY A . n A 1 52 PHE 52 72 72 PHE PHE A . n A 1 53 VAL 53 73 73 VAL VAL A . n A 1 54 VAL 54 74 74 VAL VAL A . n A 1 55 GLN 55 75 75 GLN GLN A . n A 1 56 GLY 56 76 76 GLY GLY A . n A 1 57 SER 57 77 77 SER SER A . n A 1 58 ASN 58 78 78 ASN ASN A . n A 1 59 GLY 59 79 79 GLY GLY A . n A 1 60 GLU 60 80 80 GLU GLU A . n A 1 61 PHE 61 81 81 PHE PHE A . n A 1 62 PRO 62 82 82 PRO PRO A . n A 1 63 PHE 63 83 83 PHE PHE A . n A 1 64 LEU 64 84 84 LEU LEU A . n A 1 65 THR 65 85 85 THR THR A . n A 1 66 SER 66 86 86 SER SER A . n A 1 67 SER 67 87 87 SER SER A . n A 1 68 GLU 68 88 88 GLU GLU A . n A 1 69 ARG 69 89 89 ARG ARG A . n A 1 70 LEU 70 90 90 LEU LEU A . n A 1 71 GLU 71 91 91 GLU GLU A . n A 1 72 VAL 72 92 92 VAL VAL A . n A 1 73 VAL 73 93 93 VAL VAL A . n A 1 74 SER 74 94 94 SER SER A . n A 1 75 ARG 75 95 95 ARG ARG A . n A 1 76 VAL 76 96 96 VAL VAL A . n A 1 77 ARG 77 97 97 ARG ARG A . n A 1 78 GLN 78 98 98 GLN GLN A . n A 1 79 ALA 79 99 99 ALA ALA A . n A 1 80 MET 80 100 100 MET MET A . n A 1 81 PRO 81 101 101 PRO PRO A . n A 1 82 LYS 82 102 102 LYS LYS A . n A 1 83 ASN 83 103 103 ASN ASN A . n A 1 84 ARG 84 104 104 ARG ARG A . n A 1 85 LEU 85 105 105 LEU LEU A . n A 1 86 LEU 86 106 106 LEU LEU A . n A 1 87 LEU 87 107 107 LEU LEU A . n A 1 88 ALA 88 108 108 ALA ALA A . n A 1 89 GLY 89 109 109 GLY GLY A . n A 1 90 SER 90 110 110 SER SER A . n A 1 91 GLY 91 111 111 GLY GLY A . n A 1 92 CYS 92 112 112 CYS CYS A . n A 1 93 GLU 93 113 113 GLU GLU A . n A 1 94 SER 94 114 114 SER SER A . n A 1 95 THR 95 115 115 THR THR A . n A 1 96 GLN 96 116 116 GLN GLN A . n A 1 97 ALA 97 117 117 ALA ALA A . n A 1 98 THR 98 118 118 THR THR A . n A 1 99 VAL 99 119 119 VAL VAL A . n A 1 100 GLU 100 120 120 GLU GLU A . n A 1 101 MET 101 121 121 MET MET A . n A 1 102 THR 102 122 122 THR THR A . n A 1 103 VAL 103 123 123 VAL VAL A . n A 1 104 SER 104 124 124 SER SER A . n A 1 105 MET 105 125 125 MET MET A . n A 1 106 ALA 106 126 126 ALA ALA A . n A 1 107 GLN 107 127 127 GLN GLN A . n A 1 108 VAL 108 128 128 VAL VAL A . n A 1 109 GLY 109 129 129 GLY GLY A . n A 1 110 ALA 110 130 130 ALA ALA A . n A 1 111 ASP 111 131 131 ASP ASP A . n A 1 112 ALA 112 132 132 ALA ALA A . n A 1 113 ALA 113 133 133 ALA ALA A . n A 1 114 MET 114 134 134 MET MET A . n A 1 115 VAL 115 135 135 VAL VAL A . n A 1 116 VAL 116 136 136 VAL VAL A . n A 1 117 THR 117 137 137 THR THR A . n A 1 118 PRO 118 138 138 PRO PRO A . n A 1 119 CYS 119 139 139 CYS CYS A . n A 1 120 TYR 120 140 140 TYR TYR A . n A 1 121 TYR 121 141 141 TYR TYR A . n A 1 122 ARG 122 142 142 ARG ARG A . n A 1 123 GLY 123 143 143 GLY GLY A . n A 1 124 ARG 124 144 144 ARG ARG A . n A 1 125 MET 125 145 145 MET MET A . n A 1 126 SER 126 146 146 SER SER A . n A 1 127 SER 127 147 147 SER SER A . n A 1 128 ALA 128 148 148 ALA ALA A . n A 1 129 ALA 129 149 149 ALA ALA A . n A 1 130 LEU 130 150 150 LEU LEU A . n A 1 131 ILE 131 151 151 ILE ILE A . n A 1 132 HIS 132 152 152 HIS HIS A . n A 1 133 HIS 133 153 153 HIS HIS A . n A 1 134 TYR 134 154 154 TYR TYR A . n A 1 135 THR 135 155 155 THR THR A . n A 1 136 LYS 136 156 156 LYS LYS A . n A 1 137 VAL 137 157 157 VAL VAL A . n A 1 138 ALA 138 158 158 ALA ALA A . n A 1 139 ASP 139 159 159 ASP ASP A . n A 1 140 LEU 140 160 160 LEU LEU A . n A 1 141 SER 141 161 161 SER SER A . n A 1 142 PRO 142 162 162 PRO PRO A . n A 1 143 ILE 143 163 163 ILE ILE A . n A 1 144 PRO 144 164 164 PRO PRO A . n A 1 145 VAL 145 165 165 VAL VAL A . n A 1 146 VAL 146 166 166 VAL VAL A . n A 1 147 LEU 147 167 167 LEU LEU A . n A 1 148 TYR 148 168 168 TYR TYR A . n A 1 149 SER 149 169 169 SER SER A . n A 1 150 VAL 150 170 170 VAL VAL A . n A 1 151 PRO 151 171 171 PRO PRO A . n A 1 152 ALA 152 172 172 ALA ALA A . n A 1 153 ASN 153 173 173 ASN ASN A . n A 1 154 THR 154 174 174 THR THR A . n A 1 155 GLY 155 175 175 GLY GLY A . n A 1 156 LEU 156 176 176 LEU LEU A . n A 1 157 ASP 157 177 177 ASP ASP A . n A 1 158 LEU 158 178 178 LEU LEU A . n A 1 159 PRO 159 179 179 PRO PRO A . n A 1 160 VAL 160 180 180 VAL VAL A . n A 1 161 ASP 161 181 181 ASP ASP A . n A 1 162 ALA 162 182 182 ALA ALA A . n A 1 163 VAL 163 183 183 VAL VAL A . n A 1 164 VAL 164 184 184 VAL VAL A . n A 1 165 THR 165 185 185 THR THR A . n A 1 166 LEU 166 186 186 LEU LEU A . n A 1 167 SER 167 187 187 SER SER A . n A 1 168 GLN 168 188 188 GLN GLN A . n A 1 169 HIS 169 189 189 HIS HIS A . n A 1 170 PRO 170 190 190 PRO PRO A . n A 1 171 ASN 171 191 191 ASN ASN A . n A 1 172 ILE 172 192 192 ILE ILE A . n A 1 173 VAL 173 193 193 VAL VAL A . n A 1 174 GLY 174 194 194 GLY GLY A . n A 1 175 MET 175 195 195 MET MET A . n A 1 176 KPI 176 196 196 KPI KPI A . n A 1 177 ASP 177 197 197 ASP ASP A . n A 1 178 SER 178 198 198 SER SER A . n A 1 179 GLY 179 199 199 GLY GLY A . n A 1 180 GLY 180 200 200 GLY GLY A . n A 1 181 ASP 181 201 201 ASP ASP A . n A 1 182 VAL 182 202 202 VAL VAL A . n A 1 183 THR 183 203 203 THR THR A . n A 1 184 ARG 184 204 204 ARG ARG A . n A 1 185 ILE 185 205 205 ILE ILE A . n A 1 186 GLY 186 206 206 GLY GLY A . n A 1 187 LEU 187 207 207 LEU LEU A . n A 1 188 ILE 188 208 208 ILE ILE A . n A 1 189 VAL 189 209 209 VAL VAL A . n A 1 190 HIS 190 210 210 HIS HIS A . n A 1 191 LYS 191 211 211 LYS LYS A . n A 1 192 THR 192 212 212 THR THR A . n A 1 193 ARG 193 213 213 ARG ARG A . n A 1 194 LYS 194 214 214 LYS LYS A . n A 1 195 GLN 195 215 215 GLN GLN A . n A 1 196 ASP 196 216 216 ASP ASP A . n A 1 197 PHE 197 217 217 PHE PHE A . n A 1 198 GLN 198 218 218 GLN GLN A . n A 1 199 VAL 199 219 219 VAL VAL A . n A 1 200 LEU 200 220 220 LEU LEU A . n A 1 201 ALA 201 221 221 ALA ALA A . n A 1 202 GLY 202 222 222 GLY GLY A . n A 1 203 SER 203 223 223 SER SER A . n A 1 204 ALA 204 224 224 ALA ALA A . n A 1 205 GLY 205 225 225 GLY GLY A . n A 1 206 PHE 206 226 226 PHE PHE A . n A 1 207 LEU 207 227 227 LEU LEU A . n A 1 208 MET 208 228 228 MET MET A . n A 1 209 ALA 209 229 229 ALA ALA A . n A 1 210 SER 210 230 230 SER SER A . n A 1 211 TYR 211 231 231 TYR TYR A . n A 1 212 ALA 212 232 232 ALA ALA A . n A 1 213 LEU 213 233 233 LEU LEU A . n A 1 214 GLY 214 234 234 GLY GLY A . n A 1 215 ALA 215 235 235 ALA ALA A . n A 1 216 VAL 216 236 236 VAL VAL A . n A 1 217 GLY 217 237 237 GLY GLY A . n A 1 218 GLY 218 238 238 GLY GLY A . n A 1 219 VAL 219 239 239 VAL VAL A . n A 1 220 CYS 220 240 240 CYS CYS A . n A 1 221 ALA 221 241 241 ALA ALA A . n A 1 222 LEU 222 242 242 LEU LEU A . n A 1 223 ALA 223 243 243 ALA ALA A . n A 1 224 ASN 224 244 244 ASN ASN A . n A 1 225 VAL 225 245 245 VAL VAL A . n A 1 226 LEU 226 246 246 LEU LEU A . n A 1 227 GLY 227 247 247 GLY GLY A . n A 1 228 ALA 228 248 248 ALA ALA A . n A 1 229 GLN 229 249 249 GLN GLN A . n A 1 230 VAL 230 250 250 VAL VAL A . n A 1 231 CYS 231 251 251 CYS CYS A . n A 1 232 GLN 232 252 252 GLN GLN A . n A 1 233 LEU 233 253 253 LEU LEU A . n A 1 234 GLU 234 254 254 GLU GLU A . n A 1 235 ARG 235 255 255 ARG ARG A . n A 1 236 LEU 236 256 256 LEU LEU A . n A 1 237 CYS 237 257 257 CYS CYS A . n A 1 238 CYS 238 258 258 CYS CYS A . n A 1 239 THR 239 259 259 THR THR A . n A 1 240 GLY 240 260 260 GLY GLY A . n A 1 241 GLN 241 261 261 GLN GLN A . n A 1 242 TRP 242 262 262 TRP TRP A . n A 1 243 GLU 243 263 263 GLU GLU A . n A 1 244 ASP 244 264 264 ASP ASP A . n A 1 245 ALA 245 265 265 ALA ALA A . n A 1 246 GLN 246 266 266 GLN GLN A . n A 1 247 LYS 247 267 267 LYS LYS A . n A 1 248 LEU 248 268 268 LEU LEU A . n A 1 249 GLN 249 269 269 GLN GLN A . n A 1 250 HIS 250 270 270 HIS HIS A . n A 1 251 ARG 251 271 271 ARG ARG A . n A 1 252 LEU 252 272 272 LEU LEU A . n A 1 253 ILE 253 273 273 ILE ILE A . n A 1 254 GLU 254 274 274 GLU GLU A . n A 1 255 PRO 255 275 275 PRO PRO A . n A 1 256 ASN 256 276 276 ASN ASN A . n A 1 257 ALA 257 277 277 ALA ALA A . n A 1 258 ALA 258 278 278 ALA ALA A . n A 1 259 VAL 259 279 279 VAL VAL A . n A 1 260 THR 260 280 280 THR THR A . n A 1 261 ARG 261 281 281 ARG ARG A . n A 1 262 ARG 262 282 282 ARG ARG A . n A 1 263 PHE 263 283 283 PHE PHE A . n A 1 264 GLY 264 284 284 GLY GLY A . n A 1 265 ILE 265 285 285 ILE ILE A . n A 1 266 PRO 266 286 286 PRO PRO A . n A 1 267 GLY 267 287 287 GLY GLY A . n A 1 268 LEU 268 288 288 LEU LEU A . n A 1 269 LYS 269 289 289 LYS LYS A . n A 1 270 LYS 270 290 290 LYS LYS A . n A 1 271 ILE 271 291 291 ILE ILE A . n A 1 272 MET 272 292 292 MET MET A . n A 1 273 ASP 273 293 293 ASP ASP A . n A 1 274 TRP 274 294 294 TRP TRP A . n A 1 275 PHE 275 295 295 PHE PHE A . n A 1 276 GLY 276 296 296 GLY GLY A . n A 1 277 TYR 277 297 297 TYR TYR A . n A 1 278 TYR 278 298 298 TYR TYR A . n A 1 279 GLY 279 299 299 GLY GLY A . n A 1 280 GLY 280 300 300 GLY GLY A . n A 1 281 PRO 281 301 301 PRO PRO A . n A 1 282 CYS 282 302 302 CYS CYS A . n A 1 283 ARG 283 303 303 ARG ARG A . n A 1 284 ALA 284 304 304 ALA ALA A . n A 1 285 PRO 285 305 305 PRO PRO A . n A 1 286 LEU 286 306 306 LEU LEU A . n A 1 287 GLN 287 307 307 GLN GLN A . n A 1 288 GLU 288 308 308 GLU GLU A . n A 1 289 LEU 289 309 309 LEU LEU A . n A 1 290 SER 290 310 310 SER SER A . n A 1 291 PRO 291 311 311 PRO PRO A . n A 1 292 ALA 292 312 312 ALA ALA A . n A 1 293 GLU 293 313 313 GLU GLU A . n A 1 294 GLU 294 314 314 GLU GLU A . n A 1 295 GLU 295 315 315 GLU GLU A . n A 1 296 ALA 296 316 316 ALA ALA A . n A 1 297 LEU 297 317 317 LEU LEU A . n A 1 298 ARG 298 318 318 ARG ARG A . n A 1 299 MET 299 319 319 MET MET A . n A 1 300 ASP 300 320 320 ASP ASP A . n A 1 301 PHE 301 321 321 PHE PHE A . n A 1 302 THR 302 322 322 THR THR A . n A 1 303 SER 303 323 323 SER SER A . n A 1 304 ASN 304 324 324 ASN ASN A . n A 1 305 GLY 305 325 325 GLY GLY A . n A 1 306 TRP 306 326 326 TRP TRP A . n A 1 307 LEU 307 327 327 LEU LEU A . n # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id KPI _pdbx_struct_mod_residue.label_seq_id 176 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id KPI _pdbx_struct_mod_residue.auth_seq_id 196 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LYS _pdbx_struct_mod_residue.details ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 14130 ? 1 MORE -2 ? 1 'SSA (A^2)' 40040 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 70.6150000000 0.0000000000 -1.0000000000 0.0000000000 122.3087677765 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 7_556 y,x,-z+4/3 -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 144.5173333333 4 'crystal symmetry operation' 10_666 -y+1,-x+1,-z+4/3 0.5000000000 -0.8660254038 0.0000000000 70.6150000000 -0.8660254038 -0.5000000000 0.0000000000 122.3087677765 0.0000000000 0.0000000000 -1.0000000000 144.5173333333 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ILE 172 ? A ILE 192 ? 1_555 K ? H K . ? A K 328 ? 1_555 O ? A SER 167 ? A SER 187 ? 1_555 101.9 ? 2 O ? A ILE 172 ? A ILE 192 ? 1_555 K ? H K . ? A K 328 ? 1_555 O ? A HIS 169 ? A HIS 189 ? 1_555 81.1 ? 3 O ? A SER 167 ? A SER 187 ? 1_555 K ? H K . ? A K 328 ? 1_555 O ? A HIS 169 ? A HIS 189 ? 1_555 90.5 ? 4 O ? A ILE 172 ? A ILE 192 ? 1_555 K ? H K . ? A K 328 ? 1_555 O ? A ASP 196 ? A ASP 216 ? 1_555 88.3 ? 5 O ? A SER 167 ? A SER 187 ? 1_555 K ? H K . ? A K 328 ? 1_555 O ? A ASP 196 ? A ASP 216 ? 1_555 100.0 ? 6 O ? A HIS 169 ? A HIS 189 ? 1_555 K ? H K . ? A K 328 ? 1_555 O ? A ASP 196 ? A ASP 216 ? 1_555 166.4 ? 7 O ? A ILE 172 ? A ILE 192 ? 1_555 K ? H K . ? A K 328 ? 1_555 O ? I HOH . ? A HOH 371 ? 1_555 98.0 ? 8 O ? A SER 167 ? A SER 187 ? 1_555 K ? H K . ? A K 328 ? 1_555 O ? I HOH . ? A HOH 371 ? 1_555 159.3 ? 9 O ? A HIS 169 ? A HIS 189 ? 1_555 K ? H K . ? A K 328 ? 1_555 O ? I HOH . ? A HOH 371 ? 1_555 86.9 ? 10 O ? A ASP 196 ? A ASP 216 ? 1_555 K ? H K . ? A K 328 ? 1_555 O ? I HOH . ? A HOH 371 ? 1_555 86.2 ? 11 O ? A ILE 172 ? A ILE 192 ? 1_555 K ? H K . ? A K 328 ? 1_555 O ? I HOH . ? A HOH 342 ? 1_555 170.2 ? 12 O ? A SER 167 ? A SER 187 ? 1_555 K ? H K . ? A K 328 ? 1_555 O ? I HOH . ? A HOH 342 ? 1_555 73.9 ? 13 O ? A HIS 169 ? A HIS 189 ? 1_555 K ? H K . ? A K 328 ? 1_555 O ? I HOH . ? A HOH 342 ? 1_555 107.6 ? 14 O ? A ASP 196 ? A ASP 216 ? 1_555 K ? H K . ? A K 328 ? 1_555 O ? I HOH . ? A HOH 342 ? 1_555 83.8 ? 15 O ? I HOH . ? A HOH 371 ? 1_555 K ? H K . ? A K 328 ? 1_555 O ? I HOH . ? A HOH 342 ? 1_555 87.3 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2011-10-26 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _phasing.method SAD MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 d*TREK . ? package 'Jim W. Pflugrath' Jim.Pflugrath@Rigaku.com 'data scaling' http://www.rigaku.com/software/dtrek.html ? ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 4 REFMAC 5.5.0063 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 CrystalClear . ? ? ? ? 'data collection' ? ? ? 7 d*TREK . ? ? ? ? 'data reduction' ? ? ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 MET _pdbx_validate_rmsd_bond.auth_seq_id_1 195 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 N _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 KPI _pdbx_validate_rmsd_bond.auth_seq_id_2 196 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.506 _pdbx_validate_rmsd_bond.bond_target_value 1.336 _pdbx_validate_rmsd_bond.bond_deviation 0.170 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.023 _pdbx_validate_rmsd_bond.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 139 ? ? -146.53 -7.23 2 1 TYR A 141 ? ? -92.83 55.28 3 1 PHE A 217 ? ? -161.35 107.16 4 1 LEU A 246 ? ? -118.35 51.26 5 1 THR A 280 ? ? -126.62 -97.32 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 21 ? A GLY 1 2 1 Y 1 A PRO 22 ? A PRO 2 3 1 Y 1 A LEU 23 ? A LEU 3 4 1 Y 1 A GLY 24 ? A GLY 4 5 1 Y 1 A SER 25 ? A SER 5 6 1 Y 1 A ALA 26 ? A ALA 6 7 1 Y 1 A SER 27 ? A SER 7 8 1 Y 1 A GLY 28 ? A GLY 8 9 1 Y 1 A GLU 29 ? A GLU 9 10 1 Y 1 A GLY 30 ? A GLY 10 11 1 Y 1 A LYS 31 ? A LYS 11 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 'POTASSIUM ION' K 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 1 1 EDO EDO A . C 2 EDO 1 2 2 EDO EDO A . D 2 EDO 1 3 3 EDO EDO A . E 2 EDO 1 4 4 EDO EDO A . F 2 EDO 1 5 5 EDO EDO A . G 2 EDO 1 6 6 EDO EDO A . H 3 K 1 328 328 K K A . I 4 HOH 1 330 330 HOH HOH A . I 4 HOH 2 331 331 HOH HOH A . I 4 HOH 3 332 332 HOH HOH A . I 4 HOH 4 333 333 HOH HOH A . I 4 HOH 5 334 334 HOH HOH A . I 4 HOH 6 335 335 HOH HOH A . I 4 HOH 7 336 336 HOH HOH A . I 4 HOH 8 337 337 HOH HOH A . I 4 HOH 9 338 338 HOH HOH A . I 4 HOH 10 339 339 HOH HOH A . I 4 HOH 11 340 340 HOH HOH A . I 4 HOH 12 341 341 HOH HOH A . I 4 HOH 13 342 342 HOH HOH A . I 4 HOH 14 343 343 HOH HOH A . I 4 HOH 15 344 344 HOH HOH A . I 4 HOH 16 345 345 HOH HOH A . I 4 HOH 17 346 346 HOH HOH A . I 4 HOH 18 347 347 HOH HOH A . I 4 HOH 19 348 348 HOH HOH A . I 4 HOH 20 349 349 HOH HOH A . I 4 HOH 21 350 350 HOH HOH A . I 4 HOH 22 351 351 HOH HOH A . I 4 HOH 23 352 352 HOH HOH A . I 4 HOH 24 353 353 HOH HOH A . I 4 HOH 25 354 354 HOH HOH A . I 4 HOH 26 355 355 HOH HOH A . I 4 HOH 27 356 356 HOH HOH A . I 4 HOH 28 357 357 HOH HOH A . I 4 HOH 29 358 358 HOH HOH A . I 4 HOH 30 359 359 HOH HOH A . I 4 HOH 31 360 360 HOH HOH A . I 4 HOH 32 361 361 HOH HOH A . I 4 HOH 33 362 362 HOH HOH A . I 4 HOH 34 363 363 HOH HOH A . I 4 HOH 35 364 364 HOH HOH A . I 4 HOH 36 365 365 HOH HOH A . I 4 HOH 37 366 366 HOH HOH A . I 4 HOH 38 367 367 HOH HOH A . I 4 HOH 39 368 368 HOH HOH A . I 4 HOH 40 369 369 HOH HOH A . I 4 HOH 41 370 370 HOH HOH A . I 4 HOH 42 371 371 HOH HOH A . I 4 HOH 43 372 372 HOH HOH A . I 4 HOH 44 373 373 HOH HOH A . I 4 HOH 45 374 374 HOH HOH A . I 4 HOH 46 375 375 HOH HOH A . I 4 HOH 47 376 376 HOH HOH A . I 4 HOH 48 377 377 HOH HOH A . I 4 HOH 49 378 378 HOH HOH A . I 4 HOH 50 379 379 HOH HOH A . I 4 HOH 51 380 380 HOH HOH A . I 4 HOH 52 381 381 HOH HOH A . I 4 HOH 53 382 382 HOH HOH A . I 4 HOH 54 383 383 HOH HOH A . I 4 HOH 55 384 384 HOH HOH A . I 4 HOH 56 385 385 HOH HOH A . I 4 HOH 57 386 386 HOH HOH A . I 4 HOH 58 387 387 HOH HOH A . I 4 HOH 59 388 388 HOH HOH A . I 4 HOH 60 389 389 HOH HOH A . I 4 HOH 61 390 390 HOH HOH A . I 4 HOH 62 391 391 HOH HOH A . I 4 HOH 63 392 392 HOH HOH A . I 4 HOH 64 393 393 HOH HOH A . I 4 HOH 65 394 394 HOH HOH A . I 4 HOH 66 395 395 HOH HOH A . I 4 HOH 67 396 396 HOH HOH A . I 4 HOH 68 397 397 HOH HOH A . I 4 HOH 69 398 398 HOH HOH A . I 4 HOH 70 399 399 HOH HOH A . I 4 HOH 71 400 400 HOH HOH A . I 4 HOH 72 401 401 HOH HOH A . I 4 HOH 73 402 402 HOH HOH A . I 4 HOH 74 403 403 HOH HOH A . I 4 HOH 75 404 404 HOH HOH A . I 4 HOH 76 405 405 HOH HOH A . I 4 HOH 77 406 406 HOH HOH A . I 4 HOH 78 407 407 HOH HOH A . I 4 HOH 79 408 408 HOH HOH A . I 4 HOH 80 409 409 HOH HOH A . I 4 HOH 81 410 410 HOH HOH A . I 4 HOH 82 411 411 HOH HOH A . I 4 HOH 83 412 412 HOH HOH A . I 4 HOH 84 413 413 HOH HOH A . I 4 HOH 85 414 414 HOH HOH A . I 4 HOH 86 415 415 HOH HOH A . I 4 HOH 87 416 416 HOH HOH A . I 4 HOH 88 417 417 HOH HOH A . I 4 HOH 89 418 418 HOH HOH A . I 4 HOH 90 419 419 HOH HOH A . I 4 HOH 91 420 420 HOH HOH A . I 4 HOH 92 421 421 HOH HOH A . I 4 HOH 93 422 422 HOH HOH A . I 4 HOH 94 423 423 HOH HOH A . I 4 HOH 95 424 424 HOH HOH A . I 4 HOH 96 425 425 HOH HOH A . I 4 HOH 97 426 426 HOH HOH A . I 4 HOH 98 427 427 HOH HOH A . I 4 HOH 99 428 428 HOH HOH A . I 4 HOH 100 429 429 HOH HOH A . I 4 HOH 101 430 430 HOH HOH A . I 4 HOH 102 431 431 HOH HOH A . I 4 HOH 103 432 432 HOH HOH A . I 4 HOH 104 433 433 HOH HOH A . I 4 HOH 105 434 434 HOH HOH A . I 4 HOH 106 435 435 HOH HOH A . I 4 HOH 107 436 436 HOH HOH A . I 4 HOH 108 437 437 HOH HOH A . I 4 HOH 109 438 438 HOH HOH A . I 4 HOH 110 439 439 HOH HOH A . I 4 HOH 111 440 440 HOH HOH A . I 4 HOH 112 441 441 HOH HOH A . I 4 HOH 113 442 442 HOH HOH A . I 4 HOH 114 443 443 HOH HOH A . I 4 HOH 115 444 444 HOH HOH A . I 4 HOH 116 445 445 HOH HOH A . I 4 HOH 117 446 446 HOH HOH A . I 4 HOH 118 447 447 HOH HOH A . I 4 HOH 119 448 448 HOH HOH A . I 4 HOH 120 449 449 HOH HOH A . I 4 HOH 121 450 450 HOH HOH A . I 4 HOH 122 451 451 HOH HOH A . I 4 HOH 123 452 452 HOH HOH A . I 4 HOH 124 453 453 HOH HOH A . I 4 HOH 125 454 454 HOH HOH A . I 4 HOH 126 455 455 HOH HOH A . I 4 HOH 127 456 456 HOH HOH A . I 4 HOH 128 457 457 HOH HOH A . I 4 HOH 129 458 458 HOH HOH A . I 4 HOH 130 459 459 HOH HOH A . I 4 HOH 131 460 460 HOH HOH A . I 4 HOH 132 461 461 HOH HOH A . I 4 HOH 133 462 462 HOH HOH A . I 4 HOH 134 463 463 HOH HOH A . I 4 HOH 135 464 464 HOH HOH A . I 4 HOH 136 465 465 HOH HOH A . I 4 HOH 137 466 466 HOH HOH A . I 4 HOH 138 467 467 HOH HOH A . I 4 HOH 139 468 468 HOH HOH A . I 4 HOH 140 469 469 HOH HOH A . I 4 HOH 141 470 470 HOH HOH A . I 4 HOH 142 471 471 HOH HOH A . I 4 HOH 143 472 472 HOH HOH A . I 4 HOH 144 473 473 HOH HOH A . I 4 HOH 145 474 474 HOH HOH A . I 4 HOH 146 475 475 HOH HOH A . I 4 HOH 147 476 476 HOH HOH A . I 4 HOH 148 477 477 HOH HOH A . I 4 HOH 149 478 478 HOH HOH A . I 4 HOH 150 479 479 HOH HOH A . I 4 HOH 151 480 480 HOH HOH A . I 4 HOH 152 481 481 HOH HOH A . I 4 HOH 153 482 482 HOH HOH A . I 4 HOH 154 483 483 HOH HOH A . I 4 HOH 155 484 484 HOH HOH A . I 4 HOH 156 485 485 HOH HOH A . I 4 HOH 157 486 486 HOH HOH A . I 4 HOH 158 487 487 HOH HOH A . I 4 HOH 159 488 488 HOH HOH A . I 4 HOH 160 489 489 HOH HOH A . I 4 HOH 161 490 490 HOH HOH A . I 4 HOH 162 491 491 HOH HOH A . I 4 HOH 163 492 492 HOH HOH A . I 4 HOH 164 493 493 HOH HOH A . I 4 HOH 165 494 494 HOH HOH A . I 4 HOH 166 495 495 HOH HOH A . I 4 HOH 167 496 496 HOH HOH A . I 4 HOH 168 497 497 HOH HOH A . I 4 HOH 169 498 498 HOH HOH A . I 4 HOH 170 499 499 HOH HOH A . I 4 HOH 171 500 500 HOH HOH A . I 4 HOH 172 501 501 HOH HOH A . I 4 HOH 173 502 502 HOH HOH A . I 4 HOH 174 503 503 HOH HOH A . I 4 HOH 175 504 504 HOH HOH A . I 4 HOH 176 505 505 HOH HOH A . I 4 HOH 177 506 506 HOH HOH A . I 4 HOH 178 507 507 HOH HOH A . I 4 HOH 179 508 508 HOH HOH A . I 4 HOH 180 509 509 HOH HOH A . I 4 HOH 181 510 510 HOH HOH A . I 4 HOH 182 511 511 HOH HOH A . I 4 HOH 183 512 512 HOH HOH A . I 4 HOH 184 513 513 HOH HOH A . I 4 HOH 185 514 514 HOH HOH A . I 4 HOH 186 515 515 HOH HOH A . I 4 HOH 187 516 516 HOH HOH A . I 4 HOH 188 517 517 HOH HOH A . I 4 HOH 189 518 518 HOH HOH A . I 4 HOH 190 519 519 HOH HOH A . I 4 HOH 191 520 520 HOH HOH A . I 4 HOH 192 521 521 HOH HOH A . I 4 HOH 193 522 522 HOH HOH A . I 4 HOH 194 523 523 HOH HOH A . I 4 HOH 195 524 524 HOH HOH A . I 4 HOH 196 525 525 HOH HOH A . I 4 HOH 197 526 526 HOH HOH A . I 4 HOH 198 527 527 HOH HOH A . I 4 HOH 199 528 528 HOH HOH A . I 4 HOH 200 529 529 HOH HOH A . I 4 HOH 201 530 530 HOH HOH A . I 4 HOH 202 531 531 HOH HOH A . I 4 HOH 203 532 532 HOH HOH A . I 4 HOH 204 533 533 HOH HOH A . I 4 HOH 205 534 534 HOH HOH A . I 4 HOH 206 535 535 HOH HOH A . I 4 HOH 207 536 536 HOH HOH A . I 4 HOH 208 537 537 HOH HOH A . I 4 HOH 209 538 538 HOH HOH A . I 4 HOH 210 539 539 HOH HOH A . I 4 HOH 211 540 540 HOH HOH A . #