HEADER ISOMERASE 23-MAY-11 3S5S TITLE CRYSTAL STRUCTURE OF PUTATIVE MANDELATE RACEMASE/MUCONATE LACTONIZING TITLE 2 ENZYME (PSI/COM TARGET 200551) FROM SORANGIUM CELLULOSUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME FAMILY COMPND 3 PROTEIN; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SORANGIUM CELLULOSUM; SOURCE 3 ORGANISM_TAXID: 448385; SOURCE 4 STRAIN: SO CE56; SOURCE 5 GENE: SCE2857; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) RIL; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: CSH30 KEYWDS PSI-BIOLOGY, STRUCTURAL GENOMICS, NEW YORK STRUCTURAL GENOMICS KEYWDS 2 RESEARCH CONSORTIUM, NYSGRC, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR U.A.RAMAGOPAL,R.TORO,S.C.ALMO,NEW YORK STRUCTURAL GENOMICS RESEARCH AUTHOR 2 CONSORTIUM (NYSGRC) REVDAT 2 13-SEP-23 3S5S 1 REMARK SEQADV REVDAT 1 09-NOV-11 3S5S 0 JRNL AUTH U.A.RAMAGOPAL,R.TORO,S.C.ALMO, JRNL AUTH 2 NEW YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC) JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE MANDELATE RACEMASE/MUCONATE JRNL TITL 2 LACTONIZING ENZYME (PSI/COM TARGET 200551) FROM SORANGIUM JRNL TITL 3 CELLULOSUM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 27520 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1386 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1232 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 62.64 REMARK 3 BIN R VALUE (WORKING SET) : 0.2020 REMARK 3 BIN FREE R VALUE SET COUNT : 69 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5158 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 66 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.08000 REMARK 3 B22 (A**2) : -0.08000 REMARK 3 B33 (A**2) : 0.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.295 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.196 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.259 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.884 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5376 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7308 ; 1.720 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 745 ; 6.258 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 210 ;28.544 ;22.381 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 819 ;18.861 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 60 ;18.801 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 841 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4131 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3630 ; 0.810 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5708 ; 1.485 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1746 ; 2.747 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1600 ; 4.390 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 373 REMARK 3 RESIDUE RANGE : A 392 A 419 REMARK 3 ORIGIN FOR THE GROUP (A): 9.0580 15.5570 48.5210 REMARK 3 T TENSOR REMARK 3 T11: 0.0587 T22: 0.0993 REMARK 3 T33: 0.0861 T12: 0.0288 REMARK 3 T13: -0.0235 T23: -0.0329 REMARK 3 L TENSOR REMARK 3 L11: 1.5947 L22: 1.2558 REMARK 3 L33: 1.9665 L12: 0.4650 REMARK 3 L13: -0.1170 L23: 0.1141 REMARK 3 S TENSOR REMARK 3 S11: 0.0099 S12: 0.1780 S13: -0.2764 REMARK 3 S21: -0.0454 S22: 0.0465 S23: -0.2373 REMARK 3 S31: 0.1158 S32: 0.2987 S33: -0.0563 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 360 REMARK 3 RESIDUE RANGE : B 392 B 429 REMARK 3 ORIGIN FOR THE GROUP (A): -1.3050 50.0540 56.2080 REMARK 3 T TENSOR REMARK 3 T11: 0.0912 T22: 0.0616 REMARK 3 T33: 0.0181 T12: 0.0028 REMARK 3 T13: 0.0085 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 1.5182 L22: 0.8832 REMARK 3 L33: 0.7341 L12: 0.3367 REMARK 3 L13: 0.0441 L23: 0.1840 REMARK 3 S TENSOR REMARK 3 S11: 0.0206 S12: 0.0421 S13: 0.1842 REMARK 3 S21: -0.0240 S22: -0.0043 S23: 0.0479 REMARK 3 S31: -0.2035 S32: -0.0295 S33: -0.0163 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 3S5S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000065796. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28882 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.50 REMARK 200 R MERGE (I) : 0.16200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.70 REMARK 200 R MERGE FOR SHELL (I) : 0.91900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3IK4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRATE TRIBASIC REMARK 280 DIHYDRATE PH 5.6, 0.5M AMMONIUM SULFATE, 1.0 M LITHIUM SULFATE REMARK 280 MONOHYDRATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.17700 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 48.18250 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 48.18250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 114.26550 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 48.18250 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 48.18250 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 38.08850 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 48.18250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.18250 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 114.26550 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 48.18250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.18250 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 38.08850 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 76.17700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -66.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 361 REMARK 465 ARG A 362 REMARK 465 SER A 363 REMARK 465 PRO A 364 REMARK 465 ALA A 365 REMARK 465 ALA A 366 REMARK 465 GLN A 374 REMARK 465 SER A 375 REMARK 465 HIS A 376 REMARK 465 HIS A 377 REMARK 465 HIS A 378 REMARK 465 HIS A 379 REMARK 465 HIS A 380 REMARK 465 HIS A 381 REMARK 465 TRP A 382 REMARK 465 SER A 383 REMARK 465 HIS A 384 REMARK 465 PRO A 385 REMARK 465 GLN A 386 REMARK 465 PHE A 387 REMARK 465 GLU A 388 REMARK 465 LYS A 389 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 ARG B 361 REMARK 465 ARG B 362 REMARK 465 SER B 363 REMARK 465 PRO B 364 REMARK 465 ALA B 365 REMARK 465 ALA B 366 REMARK 465 GLY B 367 REMARK 465 ALA B 368 REMARK 465 GLU B 369 REMARK 465 ASN B 370 REMARK 465 LEU B 371 REMARK 465 TYR B 372 REMARK 465 PHE B 373 REMARK 465 GLN B 374 REMARK 465 SER B 375 REMARK 465 HIS B 376 REMARK 465 HIS B 377 REMARK 465 HIS B 378 REMARK 465 HIS B 379 REMARK 465 HIS B 380 REMARK 465 HIS B 381 REMARK 465 TRP B 382 REMARK 465 SER B 383 REMARK 465 HIS B 384 REMARK 465 PRO B 385 REMARK 465 GLN B 386 REMARK 465 PHE B 387 REMARK 465 GLU B 388 REMARK 465 LYS B 389 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 11 OD1 ASN A 370 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 26 107.70 -58.20 REMARK 500 ASN A 59 11.54 -150.12 REMARK 500 ALA A 84 40.12 -96.56 REMARK 500 GLN A 223 61.74 31.34 REMARK 500 ASP A 229 74.66 -101.20 REMARK 500 ASP A 247 -78.63 -123.71 REMARK 500 MET A 299 -144.74 -82.80 REMARK 500 MET A 299 -138.90 -90.37 REMARK 500 ALA B 53 72.00 -119.09 REMARK 500 ASN B 59 19.84 -154.32 REMARK 500 ALA B 84 39.93 -86.35 REMARK 500 THR B 142 152.49 -46.89 REMARK 500 GLN B 223 62.64 32.23 REMARK 500 ASP B 229 58.67 -92.88 REMARK 500 ASP B 247 -82.20 -111.44 REMARK 500 MET B 299 -147.99 -84.09 REMARK 500 MET B 299 -132.45 -83.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 390 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 390 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 391 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 391 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-200551 RELATED DB: TARGETDB DBREF 3S5S A 1 367 UNP A9GEI3 A9GEI3_SORC5 1 367 DBREF 3S5S B 1 367 UNP A9GEI3 A9GEI3_SORC5 1 367 SEQADV 3S5S ALA A 368 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S GLU A 369 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S ASN A 370 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S LEU A 371 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S TYR A 372 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S PHE A 373 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S GLN A 374 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S SER A 375 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S HIS A 376 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S HIS A 377 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S HIS A 378 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S HIS A 379 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S HIS A 380 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S HIS A 381 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S TRP A 382 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S SER A 383 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S HIS A 384 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S PRO A 385 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S GLN A 386 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S PHE A 387 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S GLU A 388 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S LYS A 389 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S ALA B 368 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S GLU B 369 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S ASN B 370 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S LEU B 371 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S TYR B 372 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S PHE B 373 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S GLN B 374 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S SER B 375 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S HIS B 376 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S HIS B 377 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S HIS B 378 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S HIS B 379 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S HIS B 380 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S HIS B 381 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S TRP B 382 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S SER B 383 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S HIS B 384 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S PRO B 385 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S GLN B 386 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S PHE B 387 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S GLU B 388 UNP A9GEI3 EXPRESSION TAG SEQADV 3S5S LYS B 389 UNP A9GEI3 EXPRESSION TAG SEQRES 1 A 389 MET THR THR PRO THR LEU ILE ARG ARG VAL SER ILE GLU SEQRES 2 A 389 ALA LEU ASP ILE PRO LEU HIS GLU PRO PHE GLY ILE ALA SEQRES 3 A 389 GLY GLY ALA GLN GLU ARG ALA ALA ASN LEU LEU VAL THR SEQRES 4 A 389 VAL GLU LEU ALA ASP GLY THR LEU GLY PHE GLY GLU ALA SEQRES 5 A 389 ALA PRO LEU PRO ALA PHE ASN GLY GLU THR GLN ASP GLY SEQRES 6 A 389 SER ARG ALA ALA ALA VAL SER LEU ARG GLU ALA VAL VAL SEQRES 7 A 389 GLY SER ASP ALA ARG ALA TRP ARG ALA VAL ALA ARG ALA SEQRES 8 A 389 LEU ARG GLU ALA SER GLY GLY GLY ALA GLY ALA ALA ARG SEQRES 9 A 389 CYS ALA ILE GLU THR ALA ILE LEU ASP ALA LEU THR LYS SEQRES 10 A 389 ARG ALA GLY MET PRO LEU TRP ALA PHE PHE GLY GLY SER SEQRES 11 A 389 GLY THR ALA LEU THR THR ASP ILE THR ILE THR THR GLY SEQRES 12 A 389 SER PRO GLU ARG ALA GLU GLU ALA ALA ARG ARG ALA ALA SEQRES 13 A 389 ALA MET GLY PHE ARG ALA LEU LYS VAL LYS VAL GLY GLY SEQRES 14 A 389 ARG LEU ALA ALA SER ASP PRO ALA ARG ILE GLU ALA ILE SEQRES 15 A 389 HIS ALA ALA ALA PRO GLY ALA SER LEU ILE LEU ASP GLY SEQRES 16 A 389 ASN GLY GLY LEU THR ALA GLY GLU ALA LEU ALA LEU VAL SEQRES 17 A 389 ALA HIS ALA ARG ARG LEU GLY ALA ASP VAL ALA LEU LEU SEQRES 18 A 389 GLU GLN PRO VAL PRO ARG ASP ASP TRP ASP GLY MET LYS SEQRES 19 A 389 GLU VAL THR ARG ARG ALA GLY VAL ASP VAL ALA ALA ASP SEQRES 20 A 389 GLU SER ALA ALA SER ALA GLU ASP VAL LEU ARG VAL ALA SEQRES 21 A 389 ALA GLU ARG ALA ALA THR VAL VAL ASN ILE LYS LEU MET SEQRES 22 A 389 LYS GLY GLY ILE ALA GLU ALA LEU ASP ILE ALA ALA VAL SEQRES 23 A 389 ALA ARG ALA ALA GLY LEU GLY LEU MET ILE GLY GLY MET SEQRES 24 A 389 VAL GLU SER VAL LEU ALA MET THR ALA SER ALA CYS PHE SEQRES 25 A 389 ALA ALA GLY LEU GLY GLY PHE SER PHE VAL ASP LEU ASP SEQRES 26 A 389 THR PRO LEU PHE LEU ALA GLU ASN PRO PHE ASP GLY GLY SEQRES 27 A 389 PHE VAL GLN ARG GLY PRO ALA LEU SER LEU GLU GLY ILE SEQRES 28 A 389 ARG ALA GLY HIS GLY VAL THR PRO GLN ARG ARG SER PRO SEQRES 29 A 389 ALA ALA GLY ALA GLU ASN LEU TYR PHE GLN SER HIS HIS SEQRES 30 A 389 HIS HIS HIS HIS TRP SER HIS PRO GLN PHE GLU LYS SEQRES 1 B 389 MET THR THR PRO THR LEU ILE ARG ARG VAL SER ILE GLU SEQRES 2 B 389 ALA LEU ASP ILE PRO LEU HIS GLU PRO PHE GLY ILE ALA SEQRES 3 B 389 GLY GLY ALA GLN GLU ARG ALA ALA ASN LEU LEU VAL THR SEQRES 4 B 389 VAL GLU LEU ALA ASP GLY THR LEU GLY PHE GLY GLU ALA SEQRES 5 B 389 ALA PRO LEU PRO ALA PHE ASN GLY GLU THR GLN ASP GLY SEQRES 6 B 389 SER ARG ALA ALA ALA VAL SER LEU ARG GLU ALA VAL VAL SEQRES 7 B 389 GLY SER ASP ALA ARG ALA TRP ARG ALA VAL ALA ARG ALA SEQRES 8 B 389 LEU ARG GLU ALA SER GLY GLY GLY ALA GLY ALA ALA ARG SEQRES 9 B 389 CYS ALA ILE GLU THR ALA ILE LEU ASP ALA LEU THR LYS SEQRES 10 B 389 ARG ALA GLY MET PRO LEU TRP ALA PHE PHE GLY GLY SER SEQRES 11 B 389 GLY THR ALA LEU THR THR ASP ILE THR ILE THR THR GLY SEQRES 12 B 389 SER PRO GLU ARG ALA GLU GLU ALA ALA ARG ARG ALA ALA SEQRES 13 B 389 ALA MET GLY PHE ARG ALA LEU LYS VAL LYS VAL GLY GLY SEQRES 14 B 389 ARG LEU ALA ALA SER ASP PRO ALA ARG ILE GLU ALA ILE SEQRES 15 B 389 HIS ALA ALA ALA PRO GLY ALA SER LEU ILE LEU ASP GLY SEQRES 16 B 389 ASN GLY GLY LEU THR ALA GLY GLU ALA LEU ALA LEU VAL SEQRES 17 B 389 ALA HIS ALA ARG ARG LEU GLY ALA ASP VAL ALA LEU LEU SEQRES 18 B 389 GLU GLN PRO VAL PRO ARG ASP ASP TRP ASP GLY MET LYS SEQRES 19 B 389 GLU VAL THR ARG ARG ALA GLY VAL ASP VAL ALA ALA ASP SEQRES 20 B 389 GLU SER ALA ALA SER ALA GLU ASP VAL LEU ARG VAL ALA SEQRES 21 B 389 ALA GLU ARG ALA ALA THR VAL VAL ASN ILE LYS LEU MET SEQRES 22 B 389 LYS GLY GLY ILE ALA GLU ALA LEU ASP ILE ALA ALA VAL SEQRES 23 B 389 ALA ARG ALA ALA GLY LEU GLY LEU MET ILE GLY GLY MET SEQRES 24 B 389 VAL GLU SER VAL LEU ALA MET THR ALA SER ALA CYS PHE SEQRES 25 B 389 ALA ALA GLY LEU GLY GLY PHE SER PHE VAL ASP LEU ASP SEQRES 26 B 389 THR PRO LEU PHE LEU ALA GLU ASN PRO PHE ASP GLY GLY SEQRES 27 B 389 PHE VAL GLN ARG GLY PRO ALA LEU SER LEU GLU GLY ILE SEQRES 28 B 389 ARG ALA GLY HIS GLY VAL THR PRO GLN ARG ARG SER PRO SEQRES 29 B 389 ALA ALA GLY ALA GLU ASN LEU TYR PHE GLN SER HIS HIS SEQRES 30 B 389 HIS HIS HIS HIS TRP SER HIS PRO GLN PHE GLU LYS HET SO4 A 390 5 HET SO4 A 391 5 HET SO4 B 390 5 HET SO4 B 391 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 HOH *66(H2 O) HELIX 1 1 LEU A 55 GLY A 60 1 6 HELIX 2 2 THR A 62 LEU A 73 1 12 HELIX 3 3 LEU A 73 VAL A 78 1 6 HELIX 4 4 ASP A 81 ARG A 83 5 3 HELIX 5 5 ALA A 84 GLY A 97 1 14 HELIX 6 6 ALA A 100 ARG A 118 1 19 HELIX 7 7 PRO A 122 PHE A 127 1 6 HELIX 8 8 PRO A 145 GLY A 159 1 15 HELIX 9 9 GLY A 168 ALA A 172 5 5 HELIX 10 10 SER A 174 ALA A 186 1 13 HELIX 11 11 THR A 200 LEU A 214 1 15 HELIX 12 12 ASP A 229 ALA A 240 1 12 HELIX 13 13 SER A 252 GLU A 262 1 11 HELIX 14 14 LYS A 271 ALA A 290 1 20 HELIX 15 15 SER A 302 GLY A 317 1 16 HELIX 16 16 ASP A 325 LEU A 330 5 6 HELIX 17 17 LEU B 55 GLY B 60 1 6 HELIX 18 18 THR B 62 ARG B 74 1 13 HELIX 19 19 ASP B 81 ARG B 83 5 3 HELIX 20 20 ALA B 84 SER B 96 1 13 HELIX 21 21 ALA B 100 ALA B 119 1 20 HELIX 22 22 PRO B 122 PHE B 127 1 6 HELIX 23 23 SER B 144 MET B 158 1 15 HELIX 24 24 LEU B 171 ALA B 173 5 3 HELIX 25 25 SER B 174 ALA B 186 1 13 HELIX 26 26 THR B 200 GLY B 215 1 16 HELIX 27 27 ASP B 229 ALA B 240 1 12 HELIX 28 28 SER B 252 ARG B 263 1 12 HELIX 29 29 LYS B 271 GLY B 276 1 6 HELIX 30 30 GLY B 276 ALA B 290 1 15 HELIX 31 31 SER B 302 GLY B 317 1 16 HELIX 32 32 ASP B 325 LEU B 330 5 6 SHEET 1 A 4 LEU A 47 ALA A 52 0 SHEET 2 A 4 GLY A 28 LEU A 42 -1 N VAL A 40 O GLY A 48 SHEET 3 A 4 ILE A 7 ILE A 25 -1 N ILE A 17 O ALA A 33 SHEET 4 A 4 GLU A 369 TYR A 372 -1 O GLU A 369 N ILE A 12 SHEET 1 B 3 ALA A 133 THR A 135 0 SHEET 2 B 3 ALA A 345 SER A 347 -1 O LEU A 346 N LEU A 134 SHEET 3 B 3 VAL A 340 ARG A 342 -1 N ARG A 342 O ALA A 345 SHEET 1 C 8 ILE A 138 ILE A 140 0 SHEET 2 C 8 ALA A 162 LYS A 166 1 O LYS A 164 N ILE A 140 SHEET 3 C 8 SER A 190 ASP A 194 1 O ILE A 192 N VAL A 165 SHEET 4 C 8 ASP A 217 GLU A 222 1 O ASP A 217 N LEU A 191 SHEET 5 C 8 VAL A 244 ALA A 246 1 O ALA A 245 N LEU A 221 SHEET 6 C 8 VAL A 267 ILE A 270 1 O ASN A 269 N ALA A 246 SHEET 7 C 8 GLY A 293 ILE A 296 1 O MET A 295 N VAL A 268 SHEET 8 C 8 PHE A 319 VAL A 322 1 O SER A 320 N LEU A 294 SHEET 1 D 2 PHE A 335 ASP A 336 0 SHEET 2 D 2 THR A 358 PRO A 359 -1 O THR A 358 N ASP A 336 SHEET 1 E 3 ILE B 7 PRO B 18 0 SHEET 2 E 3 ARG B 32 LEU B 42 -1 O ALA B 33 N ILE B 17 SHEET 3 E 3 LEU B 47 ALA B 52 -1 O GLY B 48 N VAL B 40 SHEET 1 F 3 ALA B 133 THR B 135 0 SHEET 2 F 3 ALA B 345 SER B 347 -1 O LEU B 346 N LEU B 134 SHEET 3 F 3 VAL B 340 ARG B 342 -1 N ARG B 342 O ALA B 345 SHEET 1 G 8 ILE B 138 ILE B 140 0 SHEET 2 G 8 ALA B 162 LYS B 166 1 O LYS B 164 N ILE B 140 SHEET 3 G 8 SER B 190 ASP B 194 1 O ILE B 192 N LEU B 163 SHEET 4 G 8 ASP B 217 GLU B 222 1 O LEU B 220 N LEU B 193 SHEET 5 G 8 ASP B 243 ALA B 246 1 O ASP B 243 N LEU B 221 SHEET 6 G 8 VAL B 267 ILE B 270 1 O ASN B 269 N ALA B 246 SHEET 7 G 8 GLY B 293 ILE B 296 1 O MET B 295 N ILE B 270 SHEET 8 G 8 PHE B 321 VAL B 322 1 O PHE B 321 N ILE B 296 SHEET 1 H 2 PHE B 335 ASP B 336 0 SHEET 2 H 2 THR B 358 PRO B 359 -1 O THR B 358 N ASP B 336 SITE 1 AC1 5 GLY B 131 THR B 132 ALA B 133 ARG B 258 SITE 2 AC1 5 HOH B 422 SITE 1 AC2 4 TRP A 85 ARG A 86 PHE A 126 PHE B 126 SITE 1 AC3 4 ILE B 12 GLU B 13 ALA B 14 ARG B 67 SITE 1 AC4 7 PRO A 4 ARG A 118 ARG A 263 HOH A 406 SITE 2 AC4 7 HOH A 419 GLY B 120 ARG B 352 CRYST1 96.365 96.365 152.354 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010377 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010377 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006564 0.00000