HEADER HYDROLASE(CARBOXYPEPTIDASE) 01-JUL-92 3SC2 TITLE REFINED ATOMIC MODEL OF WHEAT SERINE CARBOXYPEPTIDASE II AT 2.2- TITLE 2 ANGSTROMS RESOLUTION CAVEAT 3SC2 ASP B 375 HAS WRONG CHIRALITY AT ATOM CA MAN C 3 HAS WRONG CAVEAT 2 3SC2 CHIRALITY AT ATOM C1 FUC C 4 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 3 3SC2 MAN D 3 HAS WRONG CHIRALITY AT ATOM C1 MAN D 3 HAS WRONG CAVEAT 4 3SC2 CHIRALITY AT ATOM C2 NAG E 2 HAS WRONG CHIRALITY AT ATOM C2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE CARBOXYPEPTIDASE II (CPDW-II); COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.16.1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: SERINE CARBOXYPEPTIDASE II (CPDW-II); COMPND 8 CHAIN: B; COMPND 9 EC: 3.4.16.1; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRITICUM AESTIVUM; SOURCE 3 ORGANISM_COMMON: BREAD WHEAT; SOURCE 4 ORGANISM_TAXID: 4565; SOURCE 5 MOL_ID: 2 KEYWDS HYDROLASE(CARBOXYPEPTIDASE) EXPDTA X-RAY DIFFRACTION AUTHOR D.-I.LIAO,S.J.REMINGTON REVDAT 8 25-DEC-24 3SC2 1 REMARK HETSYN LINK ATOM REVDAT 7 29-JUL-20 3SC2 1 CAVEAT COMPND REMARK SEQADV REVDAT 7 2 1 HETNAM LINK SITE ATOM REVDAT 6 29-NOV-17 3SC2 1 REMARK HELIX REVDAT 5 13-JUL-11 3SC2 1 VERSN REVDAT 4 25-AUG-09 3SC2 1 SOURCE REVDAT 3 24-FEB-09 3SC2 1 VERSN REVDAT 2 01-APR-03 3SC2 1 JRNL REVDAT 1 31-OCT-93 3SC2 0 SPRSDE 15-OCT-93 3SC2 2SC2 JRNL AUTH D.I.LIAO,K.BREDDAM,R.M.SWEET,T.BULLOCK,S.J.REMINGTON JRNL TITL REFINED ATOMIC MODEL OF WHEAT SERINE CARBOXYPEPTIDASE II AT JRNL TITL 2 2.2-A RESOLUTION. JRNL REF BIOCHEMISTRY V. 31 9796 1992 JRNL REFN ISSN 0006-2960 JRNL PMID 1390755 JRNL DOI 10.1021/BI00155A037 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.-I.LIAO,S.J.REMINGTON REMARK 1 TITL STRUCTURE OF WHEAT SERINE CARBOXYPEPTIDASE II AT 3.5 REMARK 1 TITL 2 ANGSTROMS RESOLUTION REMARK 1 REF J.BIOL.CHEM. V. 265 6528 1990 REMARK 1 REFN ISSN 0021-9258 REMARK 1 REFERENCE 2 REMARK 1 AUTH K.P.WILSON,D.-I.LIAO,T.BULLOCK,S.J.REMINGTON,K.BREDDAM REMARK 1 TITL CRYSTALLIZATION OF SERINE CARBOXYPEPTIDASES REMARK 1 REF J.MOL.BIOL. V. 211 301 1990 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 3 REMARK 1 AUTH K.BREDDAM,S.B.SORENSEN,I.SVENDSEN REMARK 1 TITL PRIMARY STRUCTURE AND ENZYMATIC PROPERTIES OF REMARK 1 TITL 2 CARBOXYPEPTIDASE II FROM WHEAT BRAN REMARK 1 REF CARLSBERG RES.COMMUN. V. 52 297 1987 REMARK 1 REFN ISSN 0105-1938 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3210 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 126 REMARK 3 SOLVENT ATOMS : 197 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.018 ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : 2.800 ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3SC2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000179145. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 77.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 104.75000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 49.20000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 49.20000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.37500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 49.20000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 49.20000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 157.12500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 49.20000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.20000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 52.37500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 49.20000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.20000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 157.12500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 104.75000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 98.40000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 98.40000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 104.75000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A -9 REMARK 465 GLU A -8 REMARK 465 PRO A -7 REMARK 465 SER A -6 REMARK 465 GLY A -5 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 24 CG CD OE1 OE2 REMARK 480 LYS A 163 CG CD CE NZ REMARK 480 ARG B 282 CG CD NE CZ NH1 NH2 REMARK 480 THR B 293 CB OG1 CG2 REMARK 480 GLN B 375A CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN B 291 O5 NAG E 1 2.04 REMARK 500 ND2 ASN A 113 O5 NAG D 1 2.16 REMARK 500 C3 NAG C 1 C1 FUC C 4 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 39 CD GLU A 39 OE1 0.081 REMARK 500 GLU A 65 CD GLU A 65 OE2 0.088 REMARK 500 GLU A 81 CD GLU A 81 OE1 0.080 REMARK 500 GLU A 128 CD GLU A 128 OE2 0.072 REMARK 500 GLU A 154 CD GLU A 154 OE2 0.070 REMARK 500 GLU A 208 CD GLU A 208 OE1 0.087 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A -1A CB - CG - OD1 ANGL. DEV. = -6.3 DEGREES REMARK 500 ARG A 3 N - CA - CB ANGL. DEV. = 17.1 DEGREES REMARK 500 ASP A 11 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP A 11 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 MET A 16 CB - CA - C ANGL. DEV. = 14.8 DEGREES REMARK 500 ASP A 23A CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 40 CB - CG - OD1 ANGL. DEV. = -7.6 DEGREES REMARK 500 ASP A 40 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG A 83 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ASP A 109 CB - CG - OD2 ANGL. DEV. = -6.8 DEGREES REMARK 500 ARG A 114 NE - CZ - NH1 ANGL. DEV. = 7.5 DEGREES REMARK 500 ARG A 114 NE - CZ - NH2 ANGL. DEV. = -6.3 DEGREES REMARK 500 ALA A 124 CB - CA - C ANGL. DEV. = 10.0 DEGREES REMARK 500 ASP A 180 CB - CG - OD1 ANGL. DEV. = -6.0 DEGREES REMARK 500 ASP A 180 CB - CG - OD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 ASP A 184 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ARG A 205 NE - CZ - NH1 ANGL. DEV. = 6.8 DEGREES REMARK 500 ARG A 205 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ASP A 223 CB - CG - OD2 ANGL. DEV. = -7.9 DEGREES REMARK 500 ASP A 237 CB - CG - OD1 ANGL. DEV. = -5.6 DEGREES REMARK 500 ASP B 266 CB - CG - OD1 ANGL. DEV. = 7.9 DEGREES REMARK 500 ASP B 266 CB - CG - OD2 ANGL. DEV. = -6.6 DEGREES REMARK 500 ARG B 273 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B 282 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 ASP B 283 N - CA - CB ANGL. DEV. = -19.4 DEGREES REMARK 500 ASP B 283 CB - CG - OD1 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP B 303B CB - CG - OD1 ANGL. DEV. = -8.9 DEGREES REMARK 500 ASP B 308C CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG B 311 NE - CZ - NH1 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG B 329 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG B 329 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ASP B 336 CB - CG - OD1 ANGL. DEV. = -7.7 DEGREES REMARK 500 ASP B 336 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP B 374 CB - CG - OD1 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP B 375 N - CA - CB ANGL. DEV. = 17.7 DEGREES REMARK 500 ASP B 375 CB - CG - OD1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ARG B 393 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG B 393 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 60 -69.24 -97.79 REMARK 500 GLU A 64 15.19 -140.18 REMARK 500 GLU A 65 -102.63 -127.34 REMARK 500 ALA A 74 -1.75 74.23 REMARK 500 TYR A 137 -10.31 76.58 REMARK 500 SER A 146 -115.56 49.21 REMARK 500 ALA A 148 2.96 -64.63 REMARK 500 LYS A 163 16.26 59.69 REMARK 500 ILE A 179 -57.54 -123.52 REMARK 500 SER A 240 94.52 -167.93 REMARK 500 ASP B 283 -71.39 -36.63 REMARK 500 ASN B 291 51.17 35.21 REMARK 500 TYR B 298 158.04 179.45 REMARK 500 HIS B 308B -107.56 -107.02 REMARK 500 ALA B 309 106.79 -170.39 REMARK 500 TRP B 369 118.03 -33.36 REMARK 500 ASP B 375 -131.44 64.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 282 0.18 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 THE SECONDARY STRUCTURE ASSIGNMENT IS ACCORDING TO KABSCH REMARK 700 AND SANDER (BIOPOLYMERS 22, 2577-2637, 1983) DSSP PROGRAM REMARK 700 EXCEPT FOR RESIDUES -1 TO 1 AND 102 TO 105. BOTH STRANDS REMARK 700 ARE INVOLVED IN THE HYDROGEN BONDING OF A BETA SHEET, BUT REMARK 700 NEITHER OF THEM IS ASSIGNED AS A BETA STRAND BY DSSP. DBREF 3SC2 A -9 247 UNP P08819 CBP2_WHEAT 1 259 DBREF 3SC2 B 264 422 UNP P08819 CBP2_WHEAT 266 417 SEQADV 3SC2 ALA A 74 UNP P08819 ARG 84 CONFLICT SEQRES 1 A 259 VAL GLU PRO SER GLY HIS ALA ALA ASP ARG ILE ALA ARG SEQRES 2 A 259 LEU PRO GLY GLN PRO ALA VAL ASP PHE ASP MET TYR SER SEQRES 3 A 259 GLY TYR ILE THR VAL ASP GLU GLY ALA GLY ARG SER LEU SEQRES 4 A 259 PHE TYR LEU LEU GLN GLU ALA PRO GLU ASP ALA GLN PRO SEQRES 5 A 259 ALA PRO LEU VAL LEU TRP LEU ASN GLY GLY PRO GLY CYS SEQRES 6 A 259 SER SER VAL ALA TYR GLY ALA SER GLU GLU LEU GLY ALA SEQRES 7 A 259 PHE ARG VAL LYS PRO ALA GLY ALA GLY LEU VAL LEU ASN SEQRES 8 A 259 GLU TYR ARG TRP ASN LYS VAL ALA ASN VAL LEU PHE LEU SEQRES 9 A 259 ASP SER PRO ALA GLY VAL GLY PHE SER TYR THR ASN THR SEQRES 10 A 259 SER SER ASP ILE TYR THR SER GLY ASP ASN ARG THR ALA SEQRES 11 A 259 HIS ASP SER TYR ALA PHE LEU ALA LYS TRP PHE GLU ARG SEQRES 12 A 259 PHE PRO HIS TYR LYS TYR ARG ASP PHE TYR ILE ALA GLY SEQRES 13 A 259 GLU SER TYR ALA GLY HIS TYR VAL PRO GLU LEU SER GLN SEQRES 14 A 259 LEU VAL HIS ARG SER LYS ASN PRO VAL ILE ASN LEU LYS SEQRES 15 A 259 GLY PHE MET VAL GLY ASN GLY LEU ILE ASP ASP TYR HIS SEQRES 16 A 259 ASP TYR VAL GLY THR PHE GLU PHE TRP TRP ASN HIS GLY SEQRES 17 A 259 ILE VAL SER ASP ASP THR TYR ARG ARG LEU LYS GLU ALA SEQRES 18 A 259 CYS LEU HIS ASP SER PHE ILE HIS PRO SER PRO ALA CYS SEQRES 19 A 259 ASP ALA ALA THR ASP VAL ALA THR ALA GLU GLN GLY ASN SEQRES 20 A 259 ILE ASP MET TYR SER LEU TYR THR PRO VAL CYS ASN SEQRES 1 B 152 SER TYR ASP PRO CYS THR GLU ARG TYR SER THR ALA TYR SEQRES 2 B 152 TYR ASN ARG ARG ASP VAL GLN MET ALA LEU HIS ALA ASN SEQRES 3 B 152 VAL THR GLY ALA MET ASN TYR THR TRP ALA THR CYS SER SEQRES 4 B 152 ASP THR ILE ASN THR HIS TRP HIS ASP ALA PRO ARG SER SEQRES 5 B 152 MET LEU PRO ILE TYR ARG GLU LEU ILE ALA ALA GLY LEU SEQRES 6 B 152 ARG ILE TRP VAL PHE SER GLY ASP THR ASP ALA VAL VAL SEQRES 7 B 152 PRO LEU THR ALA THR ARG TYR SER ILE GLY ALA LEU GLY SEQRES 8 B 152 LEU PRO THR THR THR SER TRP TYR PRO TRP TYR ASP ASP SEQRES 9 B 152 GLN GLU VAL GLY GLY TRP SER GLN VAL TYR LYS GLY LEU SEQRES 10 B 152 THR LEU VAL SER VAL ARG GLY ALA GLY HIS GLU VAL PRO SEQRES 11 B 152 LEU HIS ARG PRO ARG GLN ALA LEU VAL LEU PHE GLN TYR SEQRES 12 B 152 PHE LEU GLN GLY LYS PRO MET PRO GLY MODRES 3SC2 ASN A 105 ASN GLYCOSYLATION SITE MODRES 3SC2 ASN A 113 ASN GLYCOSYLATION SITE MODRES 3SC2 ASN B 291 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET MAN C 3 11 HET FUC C 4 10 HET NAG D 1 14 HET NAG D 2 14 HET MAN D 3 11 HET FUC D 4 10 HET NAG E 1 14 HET NAG E 2 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 3 NAG 6(C8 H15 N O6) FORMUL 3 MAN 2(C6 H12 O6) FORMUL 3 FUC 2(C6 H12 O5) FORMUL 6 HOH *197(H2 O) HELIX 1 H1 PRO A 38 GLN A 42 5 5 HELIX 2 H2 GLY A 61 GLU A 64 1 4 HELIX 3 H3 ARG A 83 VAL A 87 5 5 HELIX 4 H4 ASP A 112C ARG A 129 1 18 HELIX 5 H5 ALA A 148 ARG A 161 1 14 HELIX 6 H6 ASP A 181 ASN A 194 1 14 HELIX 7 H7 ASP A 200 CYS A 210 1 11 HELIX 8 H8 PRO A 220 GLN A 233 1 14 HELIX 9 H9 THR B 271 TYR B 279 1 9 HELIX 10 H10 ARG B 282 LEU B 288 1 7 HELIX 11 H11 ASP B 303B THR B 307 1 5 HELIX 12 H12 LEU B 314 ILE B 321 1 8 HELIX 13 H13 LEU B 343 GLY B 351 1 9 HELIX 14 H14 VAL B 399 HIS B 402 1 4 HELIX 15 H15 PRO B 404 GLN B 416 1 13 SHEET 1 S111 ASP A -1A ILE A 1 0 SHEET 2 S111 MET A 16 ASP A 23A-1 SHEET 3 S111 ARG A 28 LEU A 34 -1 SHEET 4 S111 ALA A 88 PHE A 92 -1 SHEET 5 S111 LEU A 46 LEU A 50 1 SHEET 6 S111 ASP A 139 GLU A 145 1 SHEET 7 S111 ASN A 168 GLY A 175 1 SHEET 8 S111 ARG B 329 GLY B 335 1 SHEET 9 S111 LEU B 387 VAL B 392 1 SHEET 10 S111 GLU B 376 TYR B 384 -1 SHEET 11 S111 THR B 366 TYR B 373 -1 SHEET 1 S2 2 PHE A 69 VAL A 71 0 SHEET 2 S2 2 LEU A 77 LEU A 79 -1 SHEET 1 S3 1 SER A 102 ASN A 105 0 SSBOND 1 CYS A 56 CYS B 303 1555 1555 2.02 SSBOND 2 CYS A 210 CYS A 222 1555 1555 2.02 SSBOND 3 CYS A 246 CYS B 268 1555 1555 2.01 LINK ND2 ASN A 105 C1 NAG C 1 1555 1555 1.35 LINK ND2 ASN A 113 C1 NAG D 1 1555 1555 1.23 LINK ND2 ASN B 291 C1 NAG E 1 1555 1555 1.22 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.39 LINK O3 NAG C 1 C1 FUC C 4 1555 1555 1.36 LINK O4 NAG C 2 C1 MAN C 3 1555 1555 1.42 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.42 LINK O3 NAG D 1 C1 FUC D 4 1555 1555 1.40 LINK O4 NAG D 2 C1 MAN D 3 1555 1555 1.41 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.39 CISPEP 1 GLN A 42 PRO A 43 0 -2.82 CISPEP 2 GLY A 53 PRO A 54 0 -2.48 CISPEP 3 SER A 95 PRO A 96 0 2.91 CRYST1 98.400 98.400 209.500 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010163 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010163 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004773 0.00000