HEADER TRANSFERASE 10-JUN-11 3SE5 TITLE FIC PROTEIN FROM NEISSERIA MENINGITIDIS MUTANT DELTA8 IN COMPLEX WITH TITLE 2 AMPPNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL FILAMENTATION PROTEIN FIC-RELATED PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEISSERIA MENINGITIDIS; SOURCE 3 ORGANISM_TAXID: 491; SOURCE 4 STRAIN: SEROGROUP B; SOURCE 5 GENE: NMB0255; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 AI; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRSFDUET1 KEYWDS AMPYLATION, ADENYLYLATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.GOEPFERT,F.STANGER,T.SCHIRMER REVDAT 5 13-SEP-23 3SE5 1 REMARK SEQADV LINK REVDAT 4 08-NOV-17 3SE5 1 REMARK REVDAT 3 15-FEB-12 3SE5 1 JRNL REVDAT 2 08-FEB-12 3SE5 1 JRNL REVDAT 1 25-JAN-12 3SE5 0 JRNL AUTH P.ENGEL,A.GOEPFERT,F.V.STANGER,A.HARMS,A.SCHMIDT,T.SCHIRMER, JRNL AUTH 2 C.DEHIO JRNL TITL ADENYLYLATION CONTROL BY INTRA- OR INTERMOLECULAR JRNL TITL 2 ACTIVE-SITE OBSTRUCTION IN FIC PROTEINS. JRNL REF NATURE V. 482 107 2012 JRNL REFN ISSN 0028-0836 JRNL PMID 22266942 JRNL DOI 10.1038/NATURE10729 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 73329 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3696 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4556 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.65 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 239 REMARK 3 BIN FREE R VALUE : 0.2610 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5068 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 204 REMARK 3 SOLVENT ATOMS : 424 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.65000 REMARK 3 B22 (A**2) : -0.26000 REMARK 3 B33 (A**2) : 0.68000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.40000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.098 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.057 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.713 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5351 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3721 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7212 ; 1.317 ; 1.997 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9014 ; 0.877 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 618 ; 4.970 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 273 ;33.244 ;24.103 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 969 ;12.658 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 44 ;14.747 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 773 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5798 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1118 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3075 ; 1.965 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1265 ; 0.717 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4938 ; 3.133 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2276 ; 4.644 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2273 ; 7.391 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3SE5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000066092. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA CCP4_3.3.16 2010/01/06 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73865 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 37.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8144 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.46 REMARK 200 R MERGE FOR SHELL (I) : 0.37000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.970 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2G03 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 44% W/V PEG 600, 0.1M NA-CITRATE, PH REMARK 280 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.51550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -72.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 MET A 11 REMARK 465 LYS A 12 REMARK 465 MET B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 MET B 11 REMARK 465 LYS B 12 REMARK 465 MET C 4 REMARK 465 HIS C 5 REMARK 465 HIS C 6 REMARK 465 HIS C 7 REMARK 465 HIS C 8 REMARK 465 HIS C 9 REMARK 465 HIS C 10 REMARK 465 MET C 11 REMARK 465 LYS C 12 REMARK 465 MET D 4 REMARK 465 HIS D 5 REMARK 465 HIS D 6 REMARK 465 HIS D 7 REMARK 465 HIS D 8 REMARK 465 HIS D 9 REMARK 465 HIS D 10 REMARK 465 MET D 11 REMARK 465 LYS D 12 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 13 OG REMARK 470 SER B 13 OG REMARK 470 SER C 13 OG REMARK 470 SER D 13 OG REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 P6G A 202 REMARK 615 P6G B 202 REMARK 615 P6G B 203 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ANP A 201 O2B REMARK 620 2 ANP A 201 O2A 77.4 REMARK 620 3 HOH A 390 O 102.1 96.5 REMARK 620 4 HOH A 410 O 78.7 94.2 169.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 204 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ANP B 201 O2B REMARK 620 2 ANP B 201 O2A 80.7 REMARK 620 3 HOH B 393 O 102.0 84.9 REMARK 620 4 HOH B 394 O 84.4 101.6 171.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ANP C 201 O2B REMARK 620 2 ANP C 201 O2A 75.7 REMARK 620 3 HOH C 420 O 100.6 86.7 REMARK 620 4 HOH C 421 O 89.5 96.0 170.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ANP D 201 O2B REMARK 620 2 ANP D 201 O2A 79.4 REMARK 620 3 HOH D 377 O 89.4 90.3 REMARK 620 4 HOH D 399 O 106.1 89.0 164.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P6G A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P6G B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P6G B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE P6G C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ANP D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3S6A RELATED DB: PDB REMARK 900 WT FIC IN COMPLEX WITH AMPPNP REMARK 900 RELATED ID: 2G03 RELATED DB: PDB REMARK 900 WT FIC REMARK 900 RELATED ID: 3SN9 RELATED DB: PDB REMARK 900 FIC MUTANT SE/AA IN COMPLEX WITH AMPPNP DBREF 3SE5 A 11 167 UNP Q7DDR9 Q7DDR9_NEIMB 11 167 DBREF 3SE5 B 11 167 UNP Q7DDR9 Q7DDR9_NEIMB 11 167 DBREF 3SE5 C 11 167 UNP Q7DDR9 Q7DDR9_NEIMB 11 167 DBREF 3SE5 D 11 167 UNP Q7DDR9 Q7DDR9_NEIMB 11 167 SEQADV 3SE5 MET A 4 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS A 5 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS A 6 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS A 7 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS A 8 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS A 9 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS A 10 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 MET B 4 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS B 5 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS B 6 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS B 7 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS B 8 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS B 9 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS B 10 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 MET C 4 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS C 5 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS C 6 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS C 7 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS C 8 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS C 9 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS C 10 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 MET D 4 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS D 5 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS D 6 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS D 7 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS D 8 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS D 9 UNP Q7DDR9 EXPRESSION TAG SEQADV 3SE5 HIS D 10 UNP Q7DDR9 EXPRESSION TAG SEQRES 1 A 164 MET HIS HIS HIS HIS HIS HIS MET LYS SER ILE ASP GLU SEQRES 2 A 164 GLN SER LEU HIS ASN ALA ARG ARG LEU PHE GLU SER GLY SEQRES 3 A 164 ASP ILE ASP ARG ILE GLU VAL GLY THR THR ALA GLY LEU SEQRES 4 A 164 GLN GLN ILE HIS ARG TYR LEU PHE GLY GLY LEU TYR ASP SEQRES 5 A 164 PHE ALA GLY GLN ILE ARG GLU ASP ASN ILE SER LYS GLY SEQRES 6 A 164 GLY PHE ARG PHE ALA ASN ALA MET TYR LEU LYS GLU ALA SEQRES 7 A 164 LEU VAL LYS ILE GLU GLN MET PRO GLU ARG THR PHE GLU SEQRES 8 A 164 GLU ILE ILE ALA LYS TYR VAL GLU MET ASN ILE ALA HIS SEQRES 9 A 164 PRO PHE LEU GLU GLY ASN GLY ARG SER THR ARG ILE TRP SEQRES 10 A 164 LEU ASP LEU VAL LEU LYS LYS ASN LEU LYS LYS VAL VAL SEQRES 11 A 164 ASN TRP GLN ASN VAL SER LYS THR LEU TYR LEU GLN ALA SEQRES 12 A 164 MET GLU ARG SER PRO VAL ASN ASP LEU GLU LEU ARG PHE SEQRES 13 A 164 LEU LEU LYS ASP ASN LEU THR ASP SEQRES 1 B 164 MET HIS HIS HIS HIS HIS HIS MET LYS SER ILE ASP GLU SEQRES 2 B 164 GLN SER LEU HIS ASN ALA ARG ARG LEU PHE GLU SER GLY SEQRES 3 B 164 ASP ILE ASP ARG ILE GLU VAL GLY THR THR ALA GLY LEU SEQRES 4 B 164 GLN GLN ILE HIS ARG TYR LEU PHE GLY GLY LEU TYR ASP SEQRES 5 B 164 PHE ALA GLY GLN ILE ARG GLU ASP ASN ILE SER LYS GLY SEQRES 6 B 164 GLY PHE ARG PHE ALA ASN ALA MET TYR LEU LYS GLU ALA SEQRES 7 B 164 LEU VAL LYS ILE GLU GLN MET PRO GLU ARG THR PHE GLU SEQRES 8 B 164 GLU ILE ILE ALA LYS TYR VAL GLU MET ASN ILE ALA HIS SEQRES 9 B 164 PRO PHE LEU GLU GLY ASN GLY ARG SER THR ARG ILE TRP SEQRES 10 B 164 LEU ASP LEU VAL LEU LYS LYS ASN LEU LYS LYS VAL VAL SEQRES 11 B 164 ASN TRP GLN ASN VAL SER LYS THR LEU TYR LEU GLN ALA SEQRES 12 B 164 MET GLU ARG SER PRO VAL ASN ASP LEU GLU LEU ARG PHE SEQRES 13 B 164 LEU LEU LYS ASP ASN LEU THR ASP SEQRES 1 C 164 MET HIS HIS HIS HIS HIS HIS MET LYS SER ILE ASP GLU SEQRES 2 C 164 GLN SER LEU HIS ASN ALA ARG ARG LEU PHE GLU SER GLY SEQRES 3 C 164 ASP ILE ASP ARG ILE GLU VAL GLY THR THR ALA GLY LEU SEQRES 4 C 164 GLN GLN ILE HIS ARG TYR LEU PHE GLY GLY LEU TYR ASP SEQRES 5 C 164 PHE ALA GLY GLN ILE ARG GLU ASP ASN ILE SER LYS GLY SEQRES 6 C 164 GLY PHE ARG PHE ALA ASN ALA MET TYR LEU LYS GLU ALA SEQRES 7 C 164 LEU VAL LYS ILE GLU GLN MET PRO GLU ARG THR PHE GLU SEQRES 8 C 164 GLU ILE ILE ALA LYS TYR VAL GLU MET ASN ILE ALA HIS SEQRES 9 C 164 PRO PHE LEU GLU GLY ASN GLY ARG SER THR ARG ILE TRP SEQRES 10 C 164 LEU ASP LEU VAL LEU LYS LYS ASN LEU LYS LYS VAL VAL SEQRES 11 C 164 ASN TRP GLN ASN VAL SER LYS THR LEU TYR LEU GLN ALA SEQRES 12 C 164 MET GLU ARG SER PRO VAL ASN ASP LEU GLU LEU ARG PHE SEQRES 13 C 164 LEU LEU LYS ASP ASN LEU THR ASP SEQRES 1 D 164 MET HIS HIS HIS HIS HIS HIS MET LYS SER ILE ASP GLU SEQRES 2 D 164 GLN SER LEU HIS ASN ALA ARG ARG LEU PHE GLU SER GLY SEQRES 3 D 164 ASP ILE ASP ARG ILE GLU VAL GLY THR THR ALA GLY LEU SEQRES 4 D 164 GLN GLN ILE HIS ARG TYR LEU PHE GLY GLY LEU TYR ASP SEQRES 5 D 164 PHE ALA GLY GLN ILE ARG GLU ASP ASN ILE SER LYS GLY SEQRES 6 D 164 GLY PHE ARG PHE ALA ASN ALA MET TYR LEU LYS GLU ALA SEQRES 7 D 164 LEU VAL LYS ILE GLU GLN MET PRO GLU ARG THR PHE GLU SEQRES 8 D 164 GLU ILE ILE ALA LYS TYR VAL GLU MET ASN ILE ALA HIS SEQRES 9 D 164 PRO PHE LEU GLU GLY ASN GLY ARG SER THR ARG ILE TRP SEQRES 10 D 164 LEU ASP LEU VAL LEU LYS LYS ASN LEU LYS LYS VAL VAL SEQRES 11 D 164 ASN TRP GLN ASN VAL SER LYS THR LEU TYR LEU GLN ALA SEQRES 12 D 164 MET GLU ARG SER PRO VAL ASN ASP LEU GLU LEU ARG PHE SEQRES 13 D 164 LEU LEU LYS ASP ASN LEU THR ASP HET ANP A 201 31 HET P6G A 202 19 HET MG A 203 1 HET ANP B 201 31 HET P6G B 202 19 HET P6G B 203 19 HET MG B 204 1 HET ANP C 201 31 HET P6G C 202 19 HET MG C 203 1 HET ANP D 201 31 HET MG D 202 1 HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETNAM P6G HEXAETHYLENE GLYCOL HETNAM MG MAGNESIUM ION HETSYN P6G POLYETHYLENE GLYCOL PEG400 FORMUL 5 ANP 4(C10 H17 N6 O12 P3) FORMUL 6 P6G 4(C12 H26 O7) FORMUL 7 MG 4(MG 2+) FORMUL 17 HOH *424(H2 O) HELIX 1 1 SER A 13 SER A 28 1 16 HELIX 2 2 GLY A 29 ILE A 34 5 6 HELIX 3 3 THR A 38 GLY A 51 1 14 HELIX 4 4 TYR A 77 GLU A 86 1 10 HELIX 5 5 THR A 92 HIS A 107 1 16 HELIX 6 6 GLY A 112 LYS A 130 1 19 HELIX 7 7 TRP A 135 VAL A 138 5 4 HELIX 8 8 SER A 139 SER A 150 1 12 HELIX 9 9 ASP A 154 ASP A 163 1 10 HELIX 10 10 SER B 13 SER B 28 1 16 HELIX 11 11 GLY B 29 ILE B 34 5 6 HELIX 12 12 THR B 38 GLY B 51 1 14 HELIX 13 13 ASN B 74 MET B 76 5 3 HELIX 14 14 TYR B 77 GLN B 87 1 11 HELIX 15 15 THR B 92 HIS B 107 1 16 HELIX 16 16 GLY B 112 LYS B 130 1 19 HELIX 17 17 TRP B 135 VAL B 138 5 4 HELIX 18 18 SER B 139 SER B 150 1 12 HELIX 19 19 ASP B 154 ASP B 163 1 10 HELIX 20 20 SER C 13 SER C 28 1 16 HELIX 21 21 GLY C 29 ILE C 34 5 6 HELIX 22 22 THR C 38 GLY C 51 1 14 HELIX 23 23 TYR C 77 GLN C 87 1 11 HELIX 24 24 THR C 92 HIS C 107 1 16 HELIX 25 25 GLY C 112 LYS C 130 1 19 HELIX 26 26 TRP C 135 VAL C 138 5 4 HELIX 27 27 SER C 139 SER C 150 1 12 HELIX 28 28 ASP C 154 ASP C 163 1 10 HELIX 29 29 SER D 13 SER D 28 1 16 HELIX 30 30 GLY D 29 ILE D 34 5 6 HELIX 31 31 THR D 38 GLY D 51 1 14 HELIX 32 32 TYR D 77 GLU D 86 1 10 HELIX 33 33 THR D 92 HIS D 107 1 16 HELIX 34 34 GLY D 112 LYS D 130 1 19 HELIX 35 35 TRP D 135 VAL D 138 5 4 HELIX 36 36 SER D 139 SER D 150 1 12 HELIX 37 37 ASP D 154 LYS D 162 1 9 SHEET 1 A 2 SER A 66 LYS A 67 0 SHEET 2 A 2 PHE A 70 ARG A 71 -1 O PHE A 70 N LYS A 67 SHEET 1 B 2 VAL A 132 VAL A 133 0 SHEET 2 B 2 LEU A 165 THR A 166 -1 O THR A 166 N VAL A 132 SHEET 1 C 2 SER B 66 LYS B 67 0 SHEET 2 C 2 PHE B 70 ARG B 71 -1 O PHE B 70 N LYS B 67 SHEET 1 D 2 VAL B 132 VAL B 133 0 SHEET 2 D 2 LEU B 165 THR B 166 -1 O THR B 166 N VAL B 132 SHEET 1 E 2 SER C 66 LYS C 67 0 SHEET 2 E 2 PHE C 70 ARG C 71 -1 O PHE C 70 N LYS C 67 SHEET 1 F 2 VAL C 132 VAL C 133 0 SHEET 2 F 2 LEU C 165 THR C 166 -1 O THR C 166 N VAL C 132 SHEET 1 G 2 SER D 66 LYS D 67 0 SHEET 2 G 2 PHE D 70 ARG D 71 -1 O PHE D 70 N LYS D 67 SHEET 1 H 2 VAL D 132 VAL D 133 0 SHEET 2 H 2 LEU D 165 THR D 166 -1 O THR D 166 N VAL D 132 LINK O2B ANP A 201 MG MG A 203 1555 1555 2.37 LINK O2A ANP A 201 MG MG A 203 1555 1555 2.42 LINK MG MG A 203 O HOH A 390 1555 1555 2.35 LINK MG MG A 203 O HOH A 410 1555 1555 2.15 LINK O2B ANP B 201 MG MG B 204 1555 1555 2.28 LINK O2A ANP B 201 MG MG B 204 1555 1555 2.30 LINK MG MG B 204 O HOH B 393 1555 1555 2.53 LINK MG MG B 204 O HOH B 394 1555 1555 2.09 LINK O2B ANP C 201 MG MG C 203 1555 1555 2.45 LINK O2A ANP C 201 MG MG C 203 1555 1555 2.48 LINK MG MG C 203 O HOH C 420 1555 1555 2.19 LINK MG MG C 203 O HOH C 421 1555 1555 2.17 LINK O2B ANP D 201 MG MG D 202 1555 1555 2.30 LINK O2A ANP D 201 MG MG D 202 1555 1555 2.48 LINK MG MG D 202 O HOH D 377 1555 1555 2.11 LINK MG MG D 202 O HOH D 399 1555 1555 2.20 SITE 1 AC1 20 LYS A 67 ASN A 104 HIS A 107 GLY A 112 SITE 2 AC1 20 ASN A 113 GLY A 114 ARG A 115 ARG A 118 SITE 3 AC1 20 LYS A 140 TYR A 143 LEU A 144 MET A 147 SITE 4 AC1 20 GLU A 148 MG A 203 HOH A 325 HOH A 332 SITE 5 AC1 20 HOH A 372 HOH A 390 HOH A 391 HOH A 410 SITE 1 AC2 4 ASP A 30 ARG A 33 TYR A 48 HOH A 394 SITE 1 AC3 3 ANP A 201 HOH A 390 HOH A 410 SITE 1 AC4 20 LYS B 67 PHE B 72 ASN B 104 HIS B 107 SITE 2 AC4 20 GLY B 112 ASN B 113 GLY B 114 ARG B 115 SITE 3 AC4 20 ARG B 118 LYS B 140 TYR B 143 LEU B 144 SITE 4 AC4 20 MET B 147 GLU B 148 MG B 204 HOH B 348 SITE 5 AC4 20 HOH B 371 HOH B 392 HOH B 393 HOH B 394 SITE 1 AC5 5 HOH B 382 LYS C 126 LYS C 130 VAL C 132 SITE 2 AC5 5 ASP C 167 SITE 1 AC6 3 LYS B 131 LEU B 165 SER C 28 SITE 1 AC7 3 ANP B 201 HOH B 393 HOH B 394 SITE 1 AC8 19 LYS C 67 ASN C 104 HIS C 107 GLU C 111 SITE 2 AC8 19 GLY C 112 ASN C 113 GLY C 114 ARG C 115 SITE 3 AC8 19 ARG C 118 LYS C 140 TYR C 143 LEU C 144 SITE 4 AC8 19 MET C 147 GLU C 148 MG C 203 HOH C 314 SITE 5 AC8 19 HOH C 364 HOH C 381 HOH C 420 SITE 1 AC9 6 ARG C 24 TYR C 48 GLY C 51 ASP C 55 SITE 2 AC9 6 HOH C 356 HOH C 384 SITE 1 BC1 3 ANP C 201 HOH C 420 HOH C 421 SITE 1 BC2 18 LYS D 67 ASN D 104 HIS D 107 GLY D 112 SITE 2 BC2 18 ASN D 113 GLY D 114 ARG D 115 ARG D 118 SITE 3 BC2 18 LYS D 140 TYR D 143 LEU D 144 MET D 147 SITE 4 BC2 18 GLU D 148 MG D 202 HOH D 360 HOH D 373 SITE 5 BC2 18 HOH D 385 HOH D 399 SITE 1 BC3 3 ANP D 201 HOH D 377 HOH D 399 CRYST1 73.945 65.031 75.995 90.00 107.08 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013524 0.000000 0.004154 0.00000 SCALE2 0.000000 0.015377 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013766 0.00000