HEADER HYDROLASE 14-JUN-11 3SGG TITLE CRYSTAL STRUCTURE OF A PUTATIVE HYDROLASE (BT_2193) FROM BACTEROIDES TITLE 2 THETAIOTAOMICRON VPI-5482 AT 1.25 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 23-557; COMPND 5 SYNONYM: PEPTIDASE S26A, SIGNAL PEPTIDASE; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON; SOURCE 3 ORGANISM_TAXID: 818; SOURCE 4 GENE: BT_2193; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS 7-STRANDED BETA/ALPHA BARREL, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI- KEYWDS 3 BIOLOGY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 01-FEB-23 3SGG 1 REMARK SEQADV LINK REVDAT 5 08-NOV-17 3SGG 1 REMARK REVDAT 4 24-DEC-14 3SGG 1 TITLE REVDAT 3 23-NOV-11 3SGG 1 TITLE REVDAT 2 13-JUL-11 3SGG 1 TITLE REVDAT 1 29-JUN-11 3SGG 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL HYDROLASE (BT_2193) FROM JRNL TITL 2 BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 1.25 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 140635 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.176 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7057 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.28 REMARK 3 REFLECTION IN BIN (WORKING SET) : 9870 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.79 REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE SET COUNT : 514 REMARK 3 BIN FREE R VALUE : 0.2730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4031 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.35 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.15000 REMARK 3 B22 (A**2) : -0.09000 REMARK 3 B33 (A**2) : -0.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.10000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.046 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.043 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.028 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.424 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4567 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3078 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6286 ; 1.466 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7612 ; 0.950 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 629 ; 6.122 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 229 ;35.297 ;25.328 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 798 ;11.527 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;11.508 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 678 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5248 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 909 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2741 ; 2.296 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1112 ; 1.569 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4493 ; 3.083 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1826 ; 4.012 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1733 ; 5.338 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 7645 ; 1.706 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 571 ; 6.546 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 7489 ; 4.027 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 3. GLYCEROL (GOL) MODELED ARE PRESENT IN CRYO REMARK 3 CONDITION. 4. ANISOTROPIC B-VALUE REFINEMENT WAS USED. REMARK 4 REMARK 4 3SGG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000066171. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAY-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97941,0.97904 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HO RIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE DECEMBER 6, 2010 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 140636 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.250 REMARK 200 RESOLUTION RANGE LOW (A) : 28.498 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.04100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.50100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: DATA WERE SCALED USING XSCALE WITH FRIEDEL PAIRS KEPT AS REMARK 200 SEPARATE WHEN COMPUTING R MERGE, COMPLETENESS AND REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20.00% POLYETHYLENE GLYCOL 6000, 0.1M REMARK 280 SODIUM CITRATE PH 5.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 80.95750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.68500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 80.95750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.68500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ALA A 23 REMARK 465 GLY A 24 REMARK 465 VAL A 25 REMARK 465 VAL A 26 REMARK 465 VAL A 27 REMARK 465 PRO A 28 REMARK 465 LYS A 29 REMARK 465 TYR A 30 REMARK 465 THR A 31 REMARK 465 PRO A 32 REMARK 465 SER A 33 REMARK 465 THR A 34 REMARK 465 GLU A 35 REMARK 465 ASN A 36 REMARK 465 PRO A 37 REMARK 465 GLY A 38 REMARK 465 GLY A 39 REMARK 465 PRO A 40 REMARK 465 GLY A 41 REMARK 465 GLU A 42 REMARK 465 GLU A 43 REMARK 465 PRO A 44 REMARK 465 GLY A 45 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 46 CG OD1 OD2 REMARK 470 LYS A 557 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 50 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 227 -32.33 70.24 REMARK 500 ASP A 271 78.19 -165.38 REMARK 500 TRP A 340 -84.83 -141.74 REMARK 500 ALA A 368 63.34 -153.89 REMARK 500 ASP A 428 -164.91 -168.56 REMARK 500 TRP A 480 119.30 -165.14 REMARK 500 ASN A 523 -169.93 -110.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 558 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 559 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 560 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 561 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 562 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 393069 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (RESIDUES 23-557) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3SGG A 23 557 UNP Q8A5P5 Q8A5P5_BACTN 23 557 SEQADV 3SGG GLY A 0 UNP Q8A5P5 EXPRESSION TAG SEQRES 1 A 536 GLY ALA GLY VAL VAL VAL PRO LYS TYR THR PRO SER THR SEQRES 2 A 536 GLU ASN PRO GLY GLY PRO GLY GLU GLU PRO GLY ASP GLY SEQRES 3 A 536 LEU ILE ASP PRO ALA GLU PRO LEU ASP ARG GLY PHE MSE SEQRES 4 A 536 HIS LEU LYS GLY ARG GLU LEU LYS SER LEU ASN SER ILE SEQRES 5 A 536 SER ILE THR GLY LEU ASN ASP GLY GLU LYS VAL ILE LEU SEQRES 6 A 536 SER THR LEU ALA GLY LEU ALA ALA ARG VAL THR GLY ASP SEQRES 7 A 536 GLN VAL TYR ILE ASN GLU GLY GLY PRO SER SER VAL TRP SEQRES 8 A 536 LEU LYS GLN MSE GLN ASN LYS TYR GLY ILE PRO VAL ASN SEQRES 9 A 536 THR TYR ASN ALA LEU ALA PRO LEU VAL GLN HIS TYR VAL SEQRES 10 A 536 GLU THR GLY VAL ILE LYS GLY TYR ILE VAL TYR THR PRO SEQRES 11 A 536 TYR SER GLU GLY GLN SER HIS SER ILE ASN VAL ALA THR SEQRES 12 A 536 SER LEU CYS GLY LEU LEU ARG GLY ILE ALA VAL PRO GLU SEQRES 13 A 536 SER LEU VAL ASP LYS VAL LYS ALA MSE GLY VAL THR THR SEQRES 14 A 536 GLU LEU MSE ASP VAL ARG SER TYR ASP GLU LYS TRP LEU SEQRES 15 A 536 TYR GLU ASN TYR LYS ASP GLN LEU ASP LYS SER LEU ALA SEQRES 16 A 536 ALA ASP MSE LYS PRO GLU ILE PHE HIS HIS LEU ARG ASP SEQRES 17 A 536 TYR ILE THR MSE THR ASN ALA PHE ALA PHE TYR ASP TYR SEQRES 18 A 536 ASN ALA ARG ARG ASP TRP SER TRP ARG THR SER ILE LEU SEQRES 19 A 536 LYS ASP LEU ASP LYS GLY ALA TYR CYS PHE GLY TYR TYR SEQRES 20 A 536 ASP LEU ASP GLU TRP GLY MSE VAL ASN ASN ALA SER GLN SEQRES 21 A 536 LEU GLY VAL SER MSE LEU PRO THR ASP GLN ALA ALA ASN SEQRES 22 A 536 LEU ALA THR LEU SER SER ILE TYR ASP THR THR GLY LEU SEQRES 23 A 536 LYS GLN ARG PRO ALA THR LYS GLU VAL VAL THR GLU GLU SEQRES 24 A 536 ASN VAL HIS TYR VAL THR PHE LEU VAL SER ASP GLY ASP SEQRES 25 A 536 ASN ILE ALA PHE ASN LEU TRP GLY GLN GLN GLY TYR MSE SEQRES 26 A 536 ASP HIS ASP LEU HIS GLY GLN PHE PRO LEU GLY TYR THR SEQRES 27 A 536 ILE SER PRO SER LEU TYR ASP LEU ALA PRO ALA ALA LEU SEQRES 28 A 536 ARG TRP TYR TYR GLU ASN SER LYS GLU GLY ASP TYR PHE SEQRES 29 A 536 VAL ALA GLY PRO SER GLY SER SER TYR ILE PHE PRO SER SEQRES 30 A 536 LYS MSE SER ASP ALA ASP LEU ASP ASP TYR LEU ALA LYS SEQRES 31 A 536 LEU ASN GLU TYR VAL ASP LYS SER GLY LEU ASN ILE CYS SEQRES 32 A 536 ASN ILE LEU ASP GLN LYS ILE MSE ASP ASN PRO LYS VAL SEQRES 33 A 536 TYR ASN LYS TYR LEU ALA GLN PRO ASN ILE ASP ALA ILE SEQRES 34 A 536 PHE TYR THR GLY TYR GLY GLU LYS GLY ASP GLY ARG ILE SEQRES 35 A 536 LYS PHE SER ASP ASN GLY LYS PRO VAL ILE GLU GLN ARG SEQRES 36 A 536 SER VAL LEU TRP GLU GLY ILE ASP GLY GLY SER ASN ARG SEQRES 37 A 536 GLY GLU GLU SER THR VAL ILE SER GLN ILE ASN SER ARG SEQRES 38 A 536 SER ALA ASN PRO HIS SER ALA ASP GLY TYR THR PHE VAL SEQRES 39 A 536 PHE VAL HIS CYS TRP THR LYS ASN GLN GLN SER ILE LYS SEQRES 40 A 536 THR VAL ILE ASP GLY LEU ASN ASP ASN VAL ARG VAL VAL SEQRES 41 A 536 PRO VAL ASP GLN PHE VAL GLN LEU VAL LYS GLN ASN LEU SEQRES 42 A 536 GLY PRO LYS MODRES 3SGG MSE A 60 MET SELENOMETHIONINE MODRES 3SGG MSE A 116 MET SELENOMETHIONINE MODRES 3SGG MSE A 186 MET SELENOMETHIONINE MODRES 3SGG MSE A 193 MET SELENOMETHIONINE MODRES 3SGG MSE A 219 MET SELENOMETHIONINE MODRES 3SGG MSE A 233 MET SELENOMETHIONINE MODRES 3SGG MSE A 275 MET SELENOMETHIONINE MODRES 3SGG MSE A 286 MET SELENOMETHIONINE MODRES 3SGG MSE A 346 MET SELENOMETHIONINE MODRES 3SGG MSE A 400 MET SELENOMETHIONINE MODRES 3SGG MSE A 432 MET SELENOMETHIONINE HET MSE A 60 13 HET MSE A 116 8 HET MSE A 186 8 HET MSE A 193 13 HET MSE A 219 13 HET MSE A 233 8 HET MSE A 275 13 HET MSE A 286 13 HET MSE A 346 8 HET MSE A 400 8 HET MSE A 432 8 HET GOL A 558 6 HET GOL A 559 6 HET GOL A 560 6 HET GOL A 561 6 HET GOL A 562 6 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 11(C5 H11 N O2 SE) FORMUL 2 GOL 5(C3 H8 O3) FORMUL 7 HOH *550(H2 O) HELIX 1 1 ASN A 79 THR A 97 1 19 HELIX 2 2 GLY A 107 GLY A 121 1 15 HELIX 3 3 ALA A 129 THR A 140 1 12 HELIX 4 4 HIS A 158 ARG A 171 1 14 HELIX 5 5 LEU A 179 MSE A 186 1 8 HELIX 6 6 ASP A 199 LYS A 208 1 10 HELIX 7 7 ASP A 209 LEU A 211 5 3 HELIX 8 8 LEU A 227 ASN A 235 1 9 HELIX 9 9 TRP A 248 ASP A 257 1 10 HELIX 10 10 ASP A 271 LEU A 282 1 12 HELIX 11 11 ASN A 294 SER A 299 1 6 HELIX 12 12 ASN A 334 TRP A 340 1 7 HELIX 13 13 TRP A 340 ASP A 347 1 8 HELIX 14 14 SER A 363 ALA A 368 1 6 HELIX 15 15 ALA A 368 SER A 379 1 12 HELIX 16 16 PHE A 396 MSE A 400 5 5 HELIX 17 17 SER A 401 GLY A 420 1 20 HELIX 18 18 LYS A 430 ASP A 433 5 4 HELIX 19 19 ASN A 434 GLN A 444 1 11 HELIX 20 20 GLY A 482 SER A 487 1 6 HELIX 21 21 GLU A 491 ARG A 502 1 12 HELIX 22 22 SER A 508 ASP A 510 5 3 HELIX 23 23 ASN A 523 GLY A 533 1 11 HELIX 24 24 PRO A 542 GLY A 555 1 14 SHEET 1 A 2 ASP A 56 ARG A 57 0 SHEET 2 A 2 LEU A 62 LYS A 63 -1 O LYS A 63 N ASP A 56 SHEET 1 B 3 ASP A 99 ASN A 104 0 SHEET 2 B 3 SER A 69 SER A 74 1 N ILE A 73 O ASN A 104 SHEET 3 B 3 VAL A 124 TYR A 127 1 O ASN A 125 N LEU A 70 SHEET 1 C 3 GLY A 172 PRO A 176 0 SHEET 2 C 3 GLY A 145 TYR A 149 1 N ILE A 147 O ILE A 173 SHEET 3 C 3 GLU A 191 ASP A 194 1 O LEU A 192 N TYR A 146 SHEET 1 D 4 PHE A 237 PHE A 239 0 SHEET 2 D 4 LEU A 215 ASP A 218 1 N ALA A 217 O PHE A 239 SHEET 3 D 4 TYR A 263 GLY A 266 1 O PHE A 265 N ALA A 216 SHEET 4 D 4 SER A 285 PRO A 288 1 O SER A 285 N CYS A 264 SHEET 1 E 5 ASP A 383 ALA A 387 0 SHEET 2 E 5 LEU A 356 ILE A 360 1 N TYR A 358 O VAL A 386 SHEET 3 E 5 HIS A 323 VAL A 329 1 N PHE A 327 O GLY A 357 SHEET 4 E 5 TYR A 512 VAL A 517 1 O VAL A 517 N LEU A 328 SHEET 5 E 5 SER A 477 LEU A 479 1 N LEU A 479 O PHE A 516 SHEET 1 F 4 ASP A 383 ALA A 387 0 SHEET 2 F 4 LEU A 356 ILE A 360 1 N TYR A 358 O VAL A 386 SHEET 3 F 4 HIS A 323 VAL A 329 1 N PHE A 327 O GLY A 357 SHEET 4 F 4 VAL A 538 VAL A 540 1 O ARG A 539 N HIS A 323 SHEET 1 G 4 ILE A 423 ASP A 428 0 SHEET 2 G 4 ALA A 449 GLY A 454 1 O ALA A 449 N CYS A 424 SHEET 3 G 4 PRO A 471 GLU A 474 1 O ILE A 473 N ILE A 450 SHEET 4 G 4 ILE A 463 PHE A 465 -1 N LYS A 464 O VAL A 472 LINK C PHE A 59 N MSE A 60 1555 1555 1.33 LINK C MSE A 60 N HIS A 61 1555 1555 1.33 LINK C GLN A 115 N MSE A 116 1555 1555 1.34 LINK C MSE A 116 N GLN A 117 1555 1555 1.31 LINK C ALA A 185 N MSE A 186 1555 1555 1.35 LINK C MSE A 186 N GLY A 187 1555 1555 1.34 LINK C LEU A 192 N MSE A 193 1555 1555 1.33 LINK C MSE A 193 N ASP A 194 1555 1555 1.33 LINK C ASP A 218 N MSE A 219 1555 1555 1.33 LINK C MSE A 219 N LYS A 220 1555 1555 1.33 LINK C THR A 232 N MSE A 233 1555 1555 1.34 LINK C MSE A 233 N THR A 234 1555 1555 1.33 LINK C GLY A 274 N MSE A 275 1555 1555 1.33 LINK C MSE A 275 N VAL A 276 1555 1555 1.34 LINK C SER A 285 N MSE A 286 1555 1555 1.34 LINK C MSE A 286 N LEU A 287 1555 1555 1.31 LINK C TYR A 345 N MSE A 346 1555 1555 1.33 LINK C MSE A 346 N ASP A 347 1555 1555 1.33 LINK C LYS A 399 N MSE A 400 1555 1555 1.32 LINK C MSE A 400 N SER A 401 1555 1555 1.32 LINK C ILE A 431 N MSE A 432 1555 1555 1.33 LINK C MSE A 432 N ASP A 433 1555 1555 1.34 CISPEP 1 PRO A 389 SER A 390 0 -22.43 SITE 1 AC1 10 GLU A 272 ASP A 331 ASP A 333 TYR A 394 SITE 2 AC1 10 LEU A 427 HOH A 565 HOH A 605 HOH A 701 SITE 3 AC1 10 HOH A 989 HOH A1055 SITE 1 AC2 7 TRP A 480 GLU A 481 GLY A 482 TRP A 520 SITE 2 AC2 7 HOH A 832 HOH A 995 HOH A1017 SITE 1 AC3 4 LYS A 119 ASP A 303 THR A 305 ARG A 373 SITE 1 AC4 6 SER A 398 MSE A 400 ASP A 402 LYS A 436 SITE 2 AC4 6 HOH A 634 HOH A 721 SITE 1 AC5 7 GLU A 66 PRO A 445 LYS A 470 HOH A 650 SITE 2 AC5 7 HOH A 660 HOH A 747 HOH A1093 CRYST1 161.915 49.370 71.359 90.00 114.45 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006176 0.000000 0.002808 0.00000 SCALE2 0.000000 0.020255 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015394 0.00000