HEADER DNA BINDING PROTEIN 17-JUN-11 3SIB TITLE CRYSTAL STRUCTURE OF URE3-BINDING PROTEIN, WILD-TYPE COMPND MOL_ID: 1; COMPND 2 MOLECULE: URE3-BP SEQUENCE SPECIFIC DNA BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTAMOEBA HISTOLYTICA; SOURCE 3 ORGANISM_TAXID: 5759; SOURCE 4 GENE: URE3-BP; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS DNA BINDING PROTEIN, EF-HAND, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL KEYWDS 2 GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 13-SEP-23 3SIB 1 REMARK LINK REVDAT 2 08-NOV-17 3SIB 1 REMARK REVDAT 1 29-JUN-11 3SIB 0 JRNL AUTH SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE JRNL AUTH 2 (SSGCID),A.GARDBERG,T.EDWARDS,B.STAKER,P.SKUBAK,C.GILCHRIST, JRNL AUTH 3 L.STEWART JRNL TITL CRYSTAL STRUCTURE OF URE3-BINDING PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.16 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 21472 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1099 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1469 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.35 REMARK 3 BIN R VALUE (WORKING SET) : 0.2560 REMARK 3 BIN FREE R VALUE SET COUNT : 83 REMARK 3 BIN FREE R VALUE : 0.3000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1663 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 167 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.112 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.063 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.565 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1783 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1228 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2433 ; 1.419 ; 1.941 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2964 ; 0.957 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 219 ; 5.172 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 91 ;31.507 ;23.077 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 291 ;12.377 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;11.152 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 250 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2000 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 415 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1043 ; 0.824 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 412 ; 0.256 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1691 ; 1.483 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 740 ; 2.657 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 733 ; 3.938 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 16 REMARK 3 ORIGIN FOR THE GROUP (A): 2.0540 14.4820 26.6380 REMARK 3 T TENSOR REMARK 3 T11: 0.0995 T22: 0.0175 REMARK 3 T33: 0.3058 T12: 0.0132 REMARK 3 T13: -0.0716 T23: 0.0131 REMARK 3 L TENSOR REMARK 3 L11: 2.7894 L22: 2.5074 REMARK 3 L33: 3.6460 L12: -2.5554 REMARK 3 L13: 0.5039 L23: 0.2111 REMARK 3 S TENSOR REMARK 3 S11: 0.2047 S12: 0.0261 S13: -0.5831 REMARK 3 S21: -0.0803 S22: -0.0022 S23: 0.4313 REMARK 3 S31: 0.5421 S32: 0.1627 S33: -0.2025 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 29 A 54 REMARK 3 ORIGIN FOR THE GROUP (A): 0.7130 16.7550 12.7750 REMARK 3 T TENSOR REMARK 3 T11: 0.1855 T22: 0.0844 REMARK 3 T33: 0.1402 T12: 0.0254 REMARK 3 T13: -0.0198 T23: -0.0707 REMARK 3 L TENSOR REMARK 3 L11: 4.5102 L22: 1.4388 REMARK 3 L33: 2.9640 L12: 0.0321 REMARK 3 L13: 1.7723 L23: -1.2016 REMARK 3 S TENSOR REMARK 3 S11: 0.2629 S12: 0.3299 S13: -0.5050 REMARK 3 S21: -0.2143 S22: -0.0796 S23: -0.0681 REMARK 3 S31: 0.6464 S32: 0.1025 S33: -0.1834 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 55 A 92 REMARK 3 ORIGIN FOR THE GROUP (A): -6.6730 32.2230 12.3910 REMARK 3 T TENSOR REMARK 3 T11: 0.0642 T22: 0.0918 REMARK 3 T33: 0.0821 T12: 0.0122 REMARK 3 T13: 0.0020 T23: -0.0027 REMARK 3 L TENSOR REMARK 3 L11: 1.3111 L22: 1.0185 REMARK 3 L33: 2.7586 L12: 0.0111 REMARK 3 L13: -0.2915 L23: 0.1373 REMARK 3 S TENSOR REMARK 3 S11: 0.0169 S12: 0.1520 S13: -0.0094 REMARK 3 S21: -0.0442 S22: 0.0012 S23: 0.1271 REMARK 3 S31: -0.0617 S32: -0.1507 S33: -0.0181 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 93 A 118 REMARK 3 ORIGIN FOR THE GROUP (A): 1.1250 25.5820 13.3160 REMARK 3 T TENSOR REMARK 3 T11: 0.0953 T22: 0.1119 REMARK 3 T33: 0.0965 T12: 0.0163 REMARK 3 T13: -0.0018 T23: -0.0139 REMARK 3 L TENSOR REMARK 3 L11: 1.7596 L22: 0.1078 REMARK 3 L33: 4.7605 L12: 0.0246 REMARK 3 L13: -0.7853 L23: -0.4028 REMARK 3 S TENSOR REMARK 3 S11: 0.0240 S12: 0.2233 S13: -0.0892 REMARK 3 S21: -0.0825 S22: -0.0242 S23: 0.0445 REMARK 3 S31: 0.1547 S32: 0.1251 S33: 0.0002 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 119 A 220 REMARK 3 ORIGIN FOR THE GROUP (A): 4.8070 28.3730 31.2990 REMARK 3 T TENSOR REMARK 3 T11: 0.0685 T22: 0.0757 REMARK 3 T33: 0.0873 T12: 0.0047 REMARK 3 T13: 0.0010 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 2.4836 L22: 0.3781 REMARK 3 L33: 0.2420 L12: -0.0981 REMARK 3 L13: -0.4818 L23: 0.0733 REMARK 3 S TENSOR REMARK 3 S11: -0.0137 S12: -0.1365 S13: -0.0778 REMARK 3 S21: 0.0407 S22: 0.0041 S23: -0.0440 REMARK 3 S31: 0.0287 S32: -0.0054 S33: 0.0095 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3SIB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000066237. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAY-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21570 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 0.51300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3SIA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: INTERNAL TRACKING NUMBER 202501H3. REMARK 280 ENHIA.01648.A.D11 PD00049 (VCID2443) AT 12 MG/ML, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 49.84950 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 49.84950 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 53.51700 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 49.84950 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 49.84950 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 53.51700 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 49.84950 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 49.84950 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 53.51700 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 49.84950 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 49.84950 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 53.51700 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 49.84950 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 49.84950 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 53.51700 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 49.84950 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 49.84950 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 53.51700 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 49.84950 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 49.84950 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 53.51700 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 49.84950 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 49.84950 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 53.51700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 49.84950 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 49.84950 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 53.51700 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -147.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 99.69900 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 -49.84950 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 49.84950 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 53.51700 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 49.84950 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 49.84950 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 53.51700 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 PRO A 3 REMARK 465 PRO A 4 REMARK 465 VAL A 5 REMARK 465 GLN A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 TRP A 20 REMARK 465 MET A 21 REMARK 465 GLY A 22 REMARK 465 ALA A 23 REMARK 465 ALA A 24 REMARK 465 CYS A 25 REMARK 465 ILE A 26 REMARK 465 TYR A 27 REMARK 465 GLN A 28 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 14 CG CD OE1 NE2 REMARK 470 ILE A 16 CG1 CG2 CD1 REMARK 470 LEU A 47 CG CD1 CD2 REMARK 470 ARG A 164 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 152 OG SER A 155 2.16 REMARK 500 O HOH A 298 O HOH A 382 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 221 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 61 OD1 REMARK 620 2 ASP A 63 OD1 81.4 REMARK 620 3 SER A 65 OG 90.7 81.2 REMARK 620 4 THR A 67 O 81.6 149.2 73.4 REMARK 620 5 GLU A 69 OE1 170.9 106.8 86.8 89.2 REMARK 620 6 GLU A 72 OE2 92.5 74.6 154.8 131.8 93.5 REMARK 620 7 GLU A 72 OE1 98.6 127.3 150.9 80.7 79.7 52.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 222 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 97 OD1 REMARK 620 2 ASP A 99 OD1 78.2 REMARK 620 3 ASN A 101 OD1 78.5 78.0 REMARK 620 4 HIS A 103 O 88.4 153.3 76.6 REMARK 620 5 GLU A 108 OE1 111.8 129.1 151.6 77.3 REMARK 620 6 GLU A 108 OE2 97.4 80.6 158.7 124.4 49.2 REMARK 620 7 HOH A 242 O 162.9 87.6 89.3 100.5 84.5 89.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 223 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 127 OD1 REMARK 620 2 ASN A 129 OD1 81.8 REMARK 620 3 SER A 131 OG 89.0 88.6 REMARK 620 4 THR A 133 O 97.2 166.8 78.3 REMARK 620 5 HOH A 248 O 168.9 88.7 85.1 90.7 REMARK 620 6 HOH A 280 O 104.3 96.3 166.4 96.6 82.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 221 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 222 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 223 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SIA RELATED DB: PDB REMARK 900 IODIDE-PHASED DOUBLE-MUTANT FORM REMARK 900 RELATED ID: ENHIA.01648.A RELATED DB: TARGETDB DBREF 3SIB A 1 220 UNP Q9GSV7 Q9GSV7_ENTHI 1 220 SEQRES 1 A 220 MET GLN PRO PRO VAL ALA ASN PHE CYS LEU TRP ASN LEU SEQRES 2 A 220 GLN PRO ILE GLN GLY SER TRP MET GLY ALA ALA CYS ILE SEQRES 3 A 220 TYR GLN MET PRO PRO SER VAL ARG ASN THR TRP TRP PHE SEQRES 4 A 220 PRO LEU LEU ASN THR ILE PRO LEU ASP GLN TYR THR ARG SEQRES 5 A 220 ILE TYR GLN TRP PHE MET GLY VAL ASP ARG ASP ARG SER SEQRES 6 A 220 GLY THR LEU GLU ILE ASN GLU LEU MET MET GLY GLN PHE SEQRES 7 A 220 PRO GLY GLY ILE ARG LEU SER PRO GLN THR ALA LEU ARG SEQRES 8 A 220 MET MET ARG ILE PHE ASP THR ASP PHE ASN GLY HIS ILE SEQRES 9 A 220 SER PHE TYR GLU PHE MET ALA MET TYR LYS PHE MET GLU SEQRES 10 A 220 LEU ALA TYR ASN LEU PHE VAL MET ASN ASP ARG ASN ARG SEQRES 11 A 220 SER GLY THR LEU GLU PRO HIS GLU ILE LEU PRO ALA LEU SEQRES 12 A 220 GLN GLN LEU GLY PHE TYR ILE ASN GLN ARG THR SER LEU SEQRES 13 A 220 LEU LEU HIS ARG LEU PHE ALA ARG GLY MET ALA PHE CYS SEQRES 14 A 220 ASP LEU ASN CYS TRP ILE ALA ILE CYS ALA PHE ALA ALA SEQRES 15 A 220 GLN THR ARG SER ALA TYR GLN MET ILE PHE MET ASN PRO SEQRES 16 A 220 TYR TYR GLY PRO MET LYS PRO PHE ASN PRO MET GLU PHE SEQRES 17 A 220 GLY LYS PHE LEU ASP VAL VAL THR SER LEU LEU GLU HET CA A 221 1 HET CA A 222 1 HET NA A 223 1 HETNAM CA CALCIUM ION HETNAM NA SODIUM ION FORMUL 2 CA 2(CA 2+) FORMUL 4 NA NA 1+ FORMUL 5 HOH *167(H2 O) HELIX 1 1 PRO A 30 ASN A 35 1 6 HELIX 2 2 TRP A 38 ILE A 45 5 8 HELIX 3 3 PRO A 46 ASP A 61 1 16 HELIX 4 4 GLU A 69 GLY A 76 1 8 HELIX 5 5 PHE A 78 ILE A 82 5 5 HELIX 6 6 SER A 85 ASP A 97 1 13 HELIX 7 7 SER A 105 ASP A 127 1 23 HELIX 8 8 GLU A 135 HIS A 137 5 3 HELIX 9 9 GLU A 138 GLY A 147 1 10 HELIX 10 10 ASN A 151 ALA A 163 1 13 HELIX 11 11 LEU A 171 MET A 193 1 23 HELIX 12 12 ASN A 194 GLY A 198 5 5 HELIX 13 13 ASN A 204 LEU A 219 1 16 SHEET 1 A 2 THR A 133 LEU A 134 0 SHEET 2 A 2 CYS A 169 ASP A 170 -1 O CYS A 169 N LEU A 134 LINK OD1 ASP A 61 CA CA A 221 1555 1555 2.24 LINK OD1 ASP A 63 CA CA A 221 1555 1555 2.35 LINK OG SER A 65 CA CA A 221 1555 1555 2.53 LINK O THR A 67 CA CA A 221 1555 1555 2.37 LINK OE1 GLU A 69 CA CA A 221 1555 1555 2.36 LINK OE2 GLU A 72 CA CA A 221 1555 1555 2.44 LINK OE1 GLU A 72 CA CA A 221 1555 1555 2.52 LINK OD1 ASP A 97 CA CA A 222 1555 1555 2.23 LINK OD1 ASP A 99 CA CA A 222 1555 1555 2.31 LINK OD1 ASN A 101 CA CA A 222 1555 1555 2.48 LINK O HIS A 103 CA CA A 222 1555 1555 2.31 LINK OE1 GLU A 108 CA CA A 222 1555 1555 2.56 LINK OE2 GLU A 108 CA CA A 222 1555 1555 2.74 LINK OD1 ASP A 127 NA NA A 223 1555 1555 2.34 LINK OD1 ASN A 129 NA NA A 223 1555 1555 2.43 LINK OG SER A 131 NA NA A 223 1555 1555 2.52 LINK O THR A 133 NA NA A 223 1555 1555 2.25 LINK CA CA A 222 O HOH A 242 1555 1555 2.42 LINK NA NA A 223 O HOH A 248 1555 1555 2.45 LINK NA NA A 223 O HOH A 280 1555 1555 2.54 SITE 1 AC1 6 ASP A 61 ASP A 63 SER A 65 THR A 67 SITE 2 AC1 6 GLU A 69 GLU A 72 SITE 1 AC2 6 ASP A 97 ASP A 99 ASN A 101 HIS A 103 SITE 2 AC2 6 GLU A 108 HOH A 242 SITE 1 AC3 6 ASP A 127 ASN A 129 SER A 131 THR A 133 SITE 2 AC3 6 HOH A 248 HOH A 280 CRYST1 99.699 99.699 107.034 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010030 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010030 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009343 0.00000