HEADER TRANSLATION 22-JUN-11 3SJZ TITLE THE STRUCTURE OF AIF2GAMMA SUBUNIT DELTA 41-45 FROM ARCHAEON TITLE 2 SULFOLOBUS SOLFATARICUS COMPLEXED WITH GDP AND GDPNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSLATION INITIATION FACTOR 2 SUBUNIT GAMMA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AIF2-GAMMA, EIF-2-GAMMA; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS P2; SOURCE 3 ORGANISM_TAXID: 273057; SOURCE 4 STRAIN: ATCC 35092 / DSM 1617 / JCM 11322 / P2; SOURCE 5 GENE: EIF2G, SSO0412; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: C41(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11D KEYWDS ZINC FINGER, INITIATE TRANSLATION, TRNA BINDING, MRNA BINDING, GTP KEYWDS 2 BINDING, TRANSLATION EXPDTA X-RAY DIFFRACTION AUTHOR V.I.ARKHIPOVA,S.M.LAZOPULO,A.M.LAZOPULO,O.S.NIKONOV, AUTHOR 2 E.A.STOLBOUSHKINA,A.G.GABDOULKHAKOV,M.B.GARBER,S.V.NIKONOV REVDAT 2 13-SEP-23 3SJZ 1 REMARK SEQADV REVDAT 1 04-JUL-12 3SJZ 0 JRNL AUTH V.I.ARKHIPOVA,S.M.LAZOPULO,A.M.LAZOPULO,O.S.NIKONOV, JRNL AUTH 2 E.A.STOLBOUSHKINA,A.G.GABDOULKHAKOV,M.B.GARBER,S.V.NIKONOV JRNL TITL HOLD FOR PUBLICATION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7_650) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 21685 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1085 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.4149 - 5.5614 1.00 2711 143 0.2002 0.2219 REMARK 3 2 5.5614 - 4.4315 1.00 2616 138 0.1502 0.2200 REMARK 3 3 4.4315 - 3.8764 1.00 2582 136 0.1411 0.1905 REMARK 3 4 3.8764 - 3.5243 1.00 2548 134 0.1681 0.2492 REMARK 3 5 3.5243 - 3.2730 1.00 2548 134 0.1828 0.2533 REMARK 3 6 3.2730 - 3.0808 1.00 2562 135 0.2257 0.2843 REMARK 3 7 3.0808 - 2.9271 1.00 2523 133 0.2681 0.3641 REMARK 3 8 2.9271 - 2.8000 0.99 2510 132 0.3357 0.3960 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 31.35 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 20.24110 REMARK 3 B22 (A**2) : 20.24110 REMARK 3 B33 (A**2) : -7.79160 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3295 REMARK 3 ANGLE : 1.392 4475 REMARK 3 CHIRALITY : 0.096 520 REMARK 3 PLANARITY : 0.006 555 REMARK 3 DIHEDRAL : 17.868 1237 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3SJZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000066295. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAY-10 REMARK 200 TEMPERATURE (KELVIN) : 203.6 REMARK 200 PH : 4.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.89430 REMARK 200 MONOCHROMATOR : YALE MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21693 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2AHO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4.5% SODIUM MALONATE, 5.5MM GDP+GDPNP, REMARK 280 PH 4.7, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 301K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.12333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 110.24667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 110.24667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 55.12333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 40 CA - C - N ANGL. DEV. = -18.4 DEGREES REMARK 500 GLU A 40 O - C - N ANGL. DEV. = 14.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 19 -5.16 83.94 REMARK 500 GLU A 40 160.11 88.76 REMARK 500 THR A 46 -77.03 -157.27 REMARK 500 ILE A 47 4.52 31.41 REMARK 500 LYS A 48 -148.90 46.87 REMARK 500 LEU A 49 -153.45 44.82 REMARK 500 VAL A 99 -4.33 65.21 REMARK 500 LYS A 188 72.19 53.51 REMARK 500 ASP A 250 -4.63 83.38 REMARK 500 GLU A 262 -70.55 -99.36 REMARK 500 ALA A 342 -167.30 -75.98 REMARK 500 LYS A 354 -13.75 76.01 REMARK 500 SER A 390 163.96 178.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 MET A 101 ALA A 102 147.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 GNP A 417 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 416 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP A 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PEN RELATED DB: PDB REMARK 900 AIF2GAMMA MUTANT IN COMPLEX WITH GDP AND GPP(NH)P REMARK 900 RELATED ID: 2PMD RELATED DB: PDB REMARK 900 AIF2GAMMA IN COMPLEX WITH GDP AND GPP(NH)P REMARK 900 RELATED ID: 2PLF RELATED DB: PDB REMARK 900 AIF2GAMMA IN THE NUCLEOTIDE-FREE FORM DBREF 3SJZ A 2 415 UNP Q980A5 IF2G_SULSO 2 415 SEQADV 3SJZ A UNP Q980A5 LEU 41 DELETION SEQADV 3SJZ A UNP Q980A5 LYS 42 DELETION SEQADV 3SJZ A UNP Q980A5 ARG 43 DELETION SEQADV 3SJZ A UNP Q980A5 GLY 44 DELETION SEQADV 3SJZ A UNP Q980A5 MET 45 DELETION SEQRES 1 A 409 ALA TRP PRO LYS VAL GLN PRO GLU VAL ASN ILE GLY VAL SEQRES 2 A 409 VAL GLY HIS VAL ASP HIS GLY LYS THR THR LEU VAL GLN SEQRES 3 A 409 ALA ILE THR GLY ILE TRP THR SER LYS HIS SER GLU GLU SEQRES 4 A 409 THR ILE LYS LEU GLY TYR ALA GLU THR ASN ILE GLY VAL SEQRES 5 A 409 CYS GLU SER CYS LYS LYS PRO GLU ALA TYR VAL THR GLU SEQRES 6 A 409 PRO SER CYS LYS SER CYS GLY SER ASP ASP GLU PRO LYS SEQRES 7 A 409 PHE LEU ARG ARG ILE SER PHE ILE ASP ALA PRO GLY HIS SEQRES 8 A 409 GLU VAL LEU MET ALA THR MET LEU SER GLY ALA ALA LEU SEQRES 9 A 409 MET ASP GLY ALA ILE LEU VAL VAL ALA ALA ASN GLU PRO SEQRES 10 A 409 PHE PRO GLN PRO GLN THR ARG GLU HIS PHE VAL ALA LEU SEQRES 11 A 409 GLY ILE ILE GLY VAL LYS ASN LEU ILE ILE VAL GLN ASN SEQRES 12 A 409 LYS VAL ASP VAL VAL SER LYS GLU GLU ALA LEU SER GLN SEQRES 13 A 409 TYR ARG GLN ILE LYS GLN PHE THR LYS GLY THR TRP ALA SEQRES 14 A 409 GLU ASN VAL PRO ILE ILE PRO VAL SER ALA LEU HIS LYS SEQRES 15 A 409 ILE ASN ILE ASP SER LEU ILE GLU GLY ILE GLU GLU TYR SEQRES 16 A 409 ILE LYS THR PRO TYR ARG ASP LEU SER GLN LYS PRO VAL SEQRES 17 A 409 MET LEU VAL ILE ARG SER PHE ASP VAL ASN LYS PRO GLY SEQRES 18 A 409 THR GLN PHE ASN GLU LEU LYS GLY GLY VAL ILE GLY GLY SEQRES 19 A 409 SER ILE ILE GLN GLY LEU PHE LYS VAL ASP GLN GLU ILE SEQRES 20 A 409 LYS VAL LEU PRO GLY LEU ARG VAL GLU LYS GLN GLY LYS SEQRES 21 A 409 VAL SER TYR GLU PRO ILE PHE THR LYS ILE SER SER ILE SEQRES 22 A 409 ARG PHE GLY ASP GLU GLU PHE LYS GLU ALA LYS PRO GLY SEQRES 23 A 409 GLY LEU VAL ALA ILE GLY THR TYR LEU ASP PRO SER LEU SEQRES 24 A 409 THR LYS ALA ASP ASN LEU LEU GLY SER ILE ILE THR LEU SEQRES 25 A 409 ALA ASP ALA GLU VAL PRO VAL LEU TRP ASN ILE ARG ILE SEQRES 26 A 409 LYS TYR ASN LEU LEU GLU ARG VAL VAL GLY ALA LYS GLU SEQRES 27 A 409 MET LEU LYS VAL ASP PRO ILE ARG ALA LYS GLU THR LEU SEQRES 28 A 409 MET LEU SER VAL GLY SER SER THR THR LEU GLY ILE VAL SEQRES 29 A 409 THR SER VAL LYS LYS ASP GLU ILE GLU VAL GLU LEU ARG SEQRES 30 A 409 ARG PRO VAL ALA VAL TRP SER ASN ASN ILE ARG THR VAL SEQRES 31 A 409 ILE SER ARG GLN ILE ALA GLY ARG TRP ARG MET ILE GLY SEQRES 32 A 409 TRP GLY LEU VAL GLU ILE HET GDP A 416 28 HET GNP A 417 32 HET BME A 1 10 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM BME BETA-MERCAPTOETHANOL FORMUL 2 GDP C10 H15 N5 O11 P2 FORMUL 3 GNP C10 H17 N6 O13 P3 FORMUL 4 BME C2 H6 O S FORMUL 5 HOH *110(H2 O) HELIX 1 1 GLY A 21 GLY A 31 1 11 HELIX 2 2 CYS A 74 GLY A 78 5 5 HELIX 3 3 ALA A 102 MET A 111 1 10 HELIX 4 4 GLN A 126 ILE A 139 1 14 HELIX 5 5 LYS A 150 VAL A 154 5 5 HELIX 6 6 SER A 155 THR A 170 1 16 HELIX 7 7 ASN A 190 ILE A 202 1 13 HELIX 8 8 GLN A 229 LEU A 233 5 5 HELIX 9 9 ASP A 302 ASN A 310 5 9 SHEET 1 A 7 TYR A 68 VAL A 69 0 SHEET 2 A 7 GLY A 50 VAL A 58 -1 N GLY A 57 O VAL A 69 SHEET 3 A 7 LYS A 84 ASP A 93 -1 O PHE A 91 N ALA A 52 SHEET 4 A 7 ASN A 11 VAL A 15 1 N VAL A 14 O ILE A 92 SHEET 5 A 7 GLY A 113 ALA A 119 1 O ILE A 115 N VAL A 15 SHEET 6 A 7 LEU A 144 ASN A 149 1 O VAL A 147 N VAL A 118 SHEET 7 A 7 ILE A 180 PRO A 182 1 O ILE A 181 N ILE A 146 SHEET 1 B 8 GLU A 284 PHE A 286 0 SHEET 2 B 8 SER A 268 PHE A 281 -1 N ILE A 279 O PHE A 286 SHEET 3 B 8 VAL A 295 THR A 299 -1 O GLY A 298 N SER A 278 SHEET 4 B 8 VAL A 237 GLN A 244 -1 N ILE A 238 O ILE A 297 SHEET 5 B 8 VAL A 214 PHE A 221 -1 N ARG A 219 O GLY A 239 SHEET 6 B 8 ILE A 315 LEU A 318 -1 O ILE A 316 N MET A 215 SHEET 7 B 8 GLU A 252 VAL A 261 -1 N LEU A 256 O ILE A 315 SHEET 8 B 8 SER A 268 PHE A 281 -1 O THR A 274 N ILE A 253 SHEET 1 C 2 PHE A 247 LYS A 248 0 SHEET 2 C 2 GLU A 288 ALA A 289 -1 O ALA A 289 N PHE A 247 SHEET 1 D 7 VAL A 325 LEU A 335 0 SHEET 2 D 7 GLU A 377 ALA A 387 -1 O LEU A 382 N TRP A 327 SHEET 3 D 7 SER A 364 VAL A 373 -1 N LEU A 367 O ARG A 383 SHEET 4 D 7 THR A 356 VAL A 361 -1 N LEU A 357 O GLY A 368 SHEET 5 D 7 ARG A 394 ILE A 401 -1 O SER A 398 N MET A 358 SHEET 6 D 7 ARG A 404 GLU A 414 -1 O GLY A 411 N THR A 395 SHEET 7 D 7 VAL A 325 LEU A 335 -1 N ARG A 330 O GLU A 414 SHEET 1 E 2 ARG A 338 VAL A 339 0 SHEET 2 E 2 LEU A 346 LYS A 347 -1 O LEU A 346 N VAL A 339 SSBOND 1 CYS A 59 CYS A 74 1555 1555 2.02 SSBOND 2 CYS A 62 CYS A 77 1555 1555 2.05 CISPEP 1 SER A 35 LYS A 36 0 -6.59 CISPEP 2 SER A 38 GLU A 39 0 -15.64 CISPEP 3 GLU A 39 GLU A 40 0 -10.24 CISPEP 4 LYS A 64 PRO A 65 0 0.64 CISPEP 5 PHE A 124 PRO A 125 0 -10.31 CISPEP 6 LEU A 256 PRO A 257 0 -5.67 CISPEP 7 LYS A 263 GLN A 264 0 -26.10 SITE 1 AC1 15 VAL A 18 ASP A 19 HIS A 20 GLY A 21 SITE 2 AC1 15 LYS A 22 THR A 23 THR A 24 ASN A 149 SITE 3 AC1 15 LYS A 150 ASP A 152 VAL A 153 SER A 184 SITE 4 AC1 15 ALA A 185 LEU A 186 HOH A 484 SITE 1 AC2 12 GLU A 39 GLU A 40 THR A 46 ASP A 222 SITE 2 AC2 12 VAL A 223 LYS A 225 LYS A 234 SER A 278 SITE 3 AC2 12 ARG A 280 GLY A 282 ALA A 296 GLY A 298 SITE 1 AC3 5 GLN A 229 PHE A 230 THR A 274 TYR A 300 SITE 2 AC3 5 HOH A 519 CRYST1 94.750 94.750 165.370 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010554 0.006093 0.000000 0.00000 SCALE2 0.000000 0.012187 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006047 0.00000