data_3SKI # _entry.id 3SKI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3SKI pdb_00003ski 10.2210/pdb3ski/pdb NDB NA1202 ? ? RCSB RCSB066314 ? ? WWPDB D_1000066314 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-08-17 2 'Structure model' 1 1 2011-10-26 3 'Structure model' 1 2 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_conn 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3SKI _pdbx_database_status.recvd_initial_deposition_date 2011-06-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3SKI . unspecified PDB 3SKZ . unspecified PDB 3SLQ . unspecified PDB 3SLM . unspecified PDB 3SKL . unspecified PDB 3SKW . unspecified PDB 3SKT . unspecified PDB 3SKR . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pikovskaya, O.' 1 'Polonskaia, A.' 2 'Patel, D.J.' 3 'Serganov, A.' 4 # _citation.id primary _citation.title ;Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch. ; _citation.journal_abbrev Nat.Chem.Biol. _citation.journal_volume 7 _citation.page_first 748 _citation.page_last 755 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1552-4450 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21841796 _citation.pdbx_database_id_DOI 10.1038/nchembio.631 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pikovskaya, O.' 1 ? primary 'Polonskaia, A.' 2 ? primary 'Patel, D.J.' 3 ? primary 'Serganov, A.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (68-MER)' 22018.873 1 ? ? ? ? 2 polymer syn 'RNA (68-MER)' 21858.914 1 ? ? ? ? 3 non-polymer syn "2'-DEOXY-GUANOSINE" 267.241 2 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 4 ? ? ? ? 5 non-polymer syn 'SUCCINIC ACID' 118.088 1 ? ? ? ? 6 non-polymer syn 'SULFATE ION' 96.063 8 ? ? ? ? 7 water nat water 18.015 111 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no yes '(GTP)GCCUUAUACAGGGUAGCAUAAUGGGCUACUGACCCCGCCUUCAAACCUAUUUGGAGACUAUAAGGU(CCC)' GGCCUUAUACAGGGUAGCAUAAUGGGCUACUGACCCCGCCUUCAAACCUAUUUGGAGACUAUAAGGUC A ? 2 polyribonucleotide no yes 'GGCCUUAUACAGGGUAGCAUAAUGGGCUACUGACCCCGCCUUCAAACCUAUUUGGAGACUAUAAGGU(CCC)' GGCCUUAUACAGGGUAGCAUAAUGGGCUACUGACCCCGCCUUCAAACCUAUUUGGAGACUAUAAGGUC B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 "2'-DEOXY-GUANOSINE" GNG 4 'MAGNESIUM ION' MG 5 'SUCCINIC ACID' SIN 6 'SULFATE ION' SO4 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GTP n 1 2 G n 1 3 C n 1 4 C n 1 5 U n 1 6 U n 1 7 A n 1 8 U n 1 9 A n 1 10 C n 1 11 A n 1 12 G n 1 13 G n 1 14 G n 1 15 U n 1 16 A n 1 17 G n 1 18 C n 1 19 A n 1 20 U n 1 21 A n 1 22 A n 1 23 U n 1 24 G n 1 25 G n 1 26 G n 1 27 C n 1 28 U n 1 29 A n 1 30 C n 1 31 U n 1 32 G n 1 33 A n 1 34 C n 1 35 C n 1 36 C n 1 37 C n 1 38 G n 1 39 C n 1 40 C n 1 41 U n 1 42 U n 1 43 C n 1 44 A n 1 45 A n 1 46 A n 1 47 C n 1 48 C n 1 49 U n 1 50 A n 1 51 U n 1 52 U n 1 53 U n 1 54 G n 1 55 G n 1 56 A n 1 57 G n 1 58 A n 1 59 C n 1 60 U n 1 61 A n 1 62 U n 1 63 A n 1 64 A n 1 65 G n 1 66 G n 1 67 U n 1 68 CCC n 2 1 G n 2 2 G n 2 3 C n 2 4 C n 2 5 U n 2 6 U n 2 7 A n 2 8 U n 2 9 A n 2 10 C n 2 11 A n 2 12 G n 2 13 G n 2 14 G n 2 15 U n 2 16 A n 2 17 G n 2 18 C n 2 19 A n 2 20 U n 2 21 A n 2 22 A n 2 23 U n 2 24 G n 2 25 G n 2 26 G n 2 27 C n 2 28 U n 2 29 A n 2 30 C n 2 31 U n 2 32 G n 2 33 A n 2 34 C n 2 35 C n 2 36 C n 2 37 C n 2 38 G n 2 39 C n 2 40 C n 2 41 U n 2 42 U n 2 43 C n 2 44 A n 2 45 A n 2 46 A n 2 47 C n 2 48 C n 2 49 U n 2 50 A n 2 51 U n 2 52 U n 2 53 U n 2 54 G n 2 55 G n 2 56 A n 2 57 G n 2 58 A n 2 59 C n 2 60 U n 2 61 A n 2 62 U n 2 63 A n 2 64 A n 2 65 G n 2 66 G n 2 67 U n 2 68 CCC n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? 'In vitro transcribed RNA' 2 1 sample ? ? ? ? ? 'In vitro transcribed RNA' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CCC 'RNA linking' n ;CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE ; ? 'C9 H13 N3 O10 P2' 385.161 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GNG non-polymer n "2'-DEOXY-GUANOSINE" ? 'C10 H13 N5 O4' 267.241 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 SIN non-polymer . 'SUCCINIC ACID' ? 'C4 H6 O4' 118.088 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GTP 1 22 22 GTP GTP A . n A 1 2 G 2 23 23 G G A . n A 1 3 C 3 24 24 C C A . n A 1 4 C 4 25 25 C C A . n A 1 5 U 5 26 26 U U A . n A 1 6 U 6 27 27 U U A . n A 1 7 A 7 28 28 A A A . n A 1 8 U 8 29 29 U U A . n A 1 9 A 9 30 30 A A A . n A 1 10 C 10 31 31 C C A . n A 1 11 A 11 32 32 A A A . n A 1 12 G 12 33 33 G G A . n A 1 13 G 13 34 34 G G A . n A 1 14 G 14 35 35 G G A . n A 1 15 U 15 36 36 U U A . n A 1 16 A 16 37 37 A A A . n A 1 17 G 17 38 38 G G A . n A 1 18 C 18 39 39 C C A . n A 1 19 A 19 40 40 A A A . n A 1 20 U 20 41 41 U U A . n A 1 21 A 21 42 42 A A A . n A 1 22 A 22 43 43 A A A . n A 1 23 U 23 44 44 U U A . n A 1 24 G 24 45 45 G G A . n A 1 25 G 25 46 46 G G A . n A 1 26 G 26 47 47 G G A . n A 1 27 C 27 48 48 C C A . n A 1 28 U 28 49 49 U U A . n A 1 29 A 29 50 50 A A A . n A 1 30 C 30 51 51 C C A . n A 1 31 U 31 52 52 U U A . n A 1 32 G 32 53 53 G G A . n A 1 33 A 33 54 54 A A A . n A 1 34 C 34 55 55 C C A . n A 1 35 C 35 56 56 C C A . n A 1 36 C 36 57 57 C C A . n A 1 37 C 37 58 58 C C A . n A 1 38 G 38 59 59 G G A . n A 1 39 C 39 60 60 C C A . n A 1 40 C 40 61 61 C C A . n A 1 41 U 41 62 62 U U A . n A 1 42 U 42 63 63 U U A . n A 1 43 C 43 64 64 C C A . n A 1 44 A 44 65 65 A A A . n A 1 45 A 45 66 66 A A A . n A 1 46 A 46 67 67 A A A . n A 1 47 C 47 68 68 C C A . n A 1 48 C 48 69 69 C C A . n A 1 49 U 49 70 70 U U A . n A 1 50 A 50 71 71 A A A . n A 1 51 U 51 72 72 U U A . n A 1 52 U 52 73 73 U U A . n A 1 53 U 53 74 74 U U A . n A 1 54 G 54 75 75 G G A . n A 1 55 G 55 76 76 G G A . n A 1 56 A 56 77 77 A A A . n A 1 57 G 57 78 78 G G A . n A 1 58 A 58 79 79 A A A . n A 1 59 C 59 80 80 C C A . n A 1 60 U 60 81 81 U U A . n A 1 61 A 61 82 82 A A A . n A 1 62 U 62 83 83 U U A . n A 1 63 A 63 84 84 A A A . n A 1 64 A 64 85 85 A A A . n A 1 65 G 65 86 86 G G A . n A 1 66 G 66 87 87 G G A . n A 1 67 U 67 88 88 U U A . n A 1 68 CCC 68 89 89 CCC CCC A . n B 2 1 G 1 22 22 G G B . n B 2 2 G 2 23 23 G G B . n B 2 3 C 3 24 24 C C B . n B 2 4 C 4 25 25 C C B . n B 2 5 U 5 26 26 U U B . n B 2 6 U 6 27 27 U U B . n B 2 7 A 7 28 28 A A B . n B 2 8 U 8 29 29 U U B . n B 2 9 A 9 30 30 A A B . n B 2 10 C 10 31 31 C C B . n B 2 11 A 11 32 32 A A B . n B 2 12 G 12 33 33 G G B . n B 2 13 G 13 34 34 G G B . n B 2 14 G 14 35 35 G G B . n B 2 15 U 15 36 36 U U B . n B 2 16 A 16 37 37 A A B . n B 2 17 G 17 38 38 G G B . n B 2 18 C 18 39 39 C C B . n B 2 19 A 19 40 40 A A B . n B 2 20 U 20 41 41 U U B . n B 2 21 A 21 42 42 A A B . n B 2 22 A 22 43 43 A A B . n B 2 23 U 23 44 44 U U B . n B 2 24 G 24 45 45 G G B . n B 2 25 G 25 46 46 G G B . n B 2 26 G 26 47 47 G G B . n B 2 27 C 27 48 48 C C B . n B 2 28 U 28 49 49 U U B . n B 2 29 A 29 50 50 A A B . n B 2 30 C 30 51 51 C C B . n B 2 31 U 31 52 52 U U B . n B 2 32 G 32 53 53 G G B . n B 2 33 A 33 54 54 A A B . n B 2 34 C 34 55 55 C C B . n B 2 35 C 35 56 56 C C B . n B 2 36 C 36 57 57 C C B . n B 2 37 C 37 58 58 C C B . n B 2 38 G 38 59 59 G G B . n B 2 39 C 39 60 60 C C B . n B 2 40 C 40 61 61 C C B . n B 2 41 U 41 62 62 U U B . n B 2 42 U 42 63 63 U U B . n B 2 43 C 43 64 64 C C B . n B 2 44 A 44 65 65 A A B . n B 2 45 A 45 66 66 A A B . n B 2 46 A 46 67 67 A A B . n B 2 47 C 47 68 68 C C B . n B 2 48 C 48 69 69 C C B . n B 2 49 U 49 70 70 U U B . n B 2 50 A 50 71 71 A A B . n B 2 51 U 51 72 72 U U B . n B 2 52 U 52 73 73 U U B . n B 2 53 U 53 74 74 U U B . n B 2 54 G 54 75 75 G G B . n B 2 55 G 55 76 76 G G B . n B 2 56 A 56 77 77 A A B . n B 2 57 G 57 78 78 G G B . n B 2 58 A 58 79 79 A A B . n B 2 59 C 59 80 80 C C B . n B 2 60 U 60 81 81 U U B . n B 2 61 A 61 82 82 A A B . n B 2 62 U 62 83 83 U U B . n B 2 63 A 63 84 84 A A B . n B 2 64 A 64 85 85 A A B . n B 2 65 G 65 86 86 G G B . n B 2 66 G 66 87 87 G G B . n B 2 67 U 67 88 88 U U B . n B 2 68 CCC 68 89 89 CCC CCC B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GNG 1 120 120 GNG GNG A . D 4 MG 1 201 201 MG MG A . E 4 MG 1 204 204 MG MG A . F 4 MG 1 228 228 MG MG A . G 5 SIN 1 301 301 SIN SIN A . H 6 SO4 1 211 211 SO4 SO4 A . I 6 SO4 1 212 212 SO4 SO4 A . J 6 SO4 1 213 213 SO4 SO4 A . K 6 SO4 1 216 216 SO4 SO4 A . L 6 SO4 1 229 229 SO4 SO4 A . M 3 GNG 1 120 120 GNG GNG B . N 4 MG 1 206 206 MG MG B . O 6 SO4 1 214 214 SO4 SO4 B . P 6 SO4 1 217 217 SO4 SO4 B . Q 6 SO4 1 219 219 SO4 SO4 B . R 7 HOH 1 1 1 HOH HOH A . R 7 HOH 2 2 2 HOH HOH A . R 7 HOH 3 4 4 HOH HOH A . R 7 HOH 4 5 5 HOH HOH A . R 7 HOH 5 6 6 HOH HOH A . R 7 HOH 6 7 7 HOH HOH A . R 7 HOH 7 10 10 HOH HOH A . R 7 HOH 8 11 11 HOH HOH A . R 7 HOH 9 13 13 HOH HOH A . R 7 HOH 10 14 14 HOH HOH A . R 7 HOH 11 15 15 HOH HOH A . R 7 HOH 12 17 17 HOH HOH A . R 7 HOH 13 19 19 HOH HOH A . R 7 HOH 14 90 90 HOH HOH A . R 7 HOH 15 91 22 HOH HOH A . R 7 HOH 16 92 23 HOH HOH A . R 7 HOH 17 93 24 HOH HOH A . R 7 HOH 18 94 26 HOH HOH A . R 7 HOH 19 95 27 HOH HOH A . R 7 HOH 20 96 96 HOH HOH A . R 7 HOH 21 97 28 HOH HOH A . R 7 HOH 22 98 29 HOH HOH A . R 7 HOH 23 99 30 HOH HOH A . R 7 HOH 24 100 100 HOH HOH A . R 7 HOH 25 101 101 HOH HOH A . R 7 HOH 26 102 31 HOH HOH A . R 7 HOH 27 103 103 HOH HOH A . R 7 HOH 28 104 104 HOH HOH A . R 7 HOH 29 105 105 HOH HOH A . R 7 HOH 30 106 106 HOH HOH A . R 7 HOH 31 107 107 HOH HOH A . R 7 HOH 32 108 34 HOH HOH A . R 7 HOH 33 109 109 HOH HOH A . R 7 HOH 34 110 110 HOH HOH A . R 7 HOH 35 111 111 HOH HOH A . R 7 HOH 36 112 112 HOH HOH A . R 7 HOH 37 113 113 HOH HOH A . R 7 HOH 38 114 35 HOH HOH A . R 7 HOH 39 115 37 HOH HOH A . R 7 HOH 40 116 39 HOH HOH A . R 7 HOH 41 117 117 HOH HOH A . R 7 HOH 42 118 118 HOH HOH A . R 7 HOH 43 119 119 HOH HOH A . R 7 HOH 44 121 121 HOH HOH A . R 7 HOH 45 122 122 HOH HOH A . R 7 HOH 46 123 123 HOH HOH A . R 7 HOH 47 124 42 HOH HOH A . R 7 HOH 48 125 45 HOH HOH A . R 7 HOH 49 126 48 HOH HOH A . R 7 HOH 50 127 51 HOH HOH A . R 7 HOH 51 128 53 HOH HOH A . R 7 HOH 52 129 129 HOH HOH A . R 7 HOH 53 130 54 HOH HOH A . R 7 HOH 54 131 131 HOH HOH A . R 7 HOH 55 132 56 HOH HOH A . R 7 HOH 56 133 59 HOH HOH A . R 7 HOH 57 134 66 HOH HOH A . R 7 HOH 58 135 67 HOH HOH A . R 7 HOH 59 136 68 HOH HOH A . R 7 HOH 60 137 137 HOH HOH A . R 7 HOH 61 138 138 HOH HOH A . R 7 HOH 62 139 69 HOH HOH A . R 7 HOH 63 140 74 HOH HOH A . R 7 HOH 64 141 80 HOH HOH A . R 7 HOH 65 142 142 HOH HOH A . R 7 HOH 66 143 143 HOH HOH A . R 7 HOH 67 144 144 HOH HOH A . R 7 HOH 68 145 145 HOH HOH A . R 7 HOH 69 146 146 HOH HOH A . R 7 HOH 70 147 147 HOH HOH A . R 7 HOH 71 148 148 HOH HOH A . R 7 HOH 72 149 83 HOH HOH A . R 7 HOH 73 150 84 HOH HOH A . R 7 HOH 74 151 87 HOH HOH A . R 7 HOH 75 152 152 HOH HOH A . R 7 HOH 76 153 153 HOH HOH A . R 7 HOH 77 154 154 HOH HOH A . R 7 HOH 78 155 155 HOH HOH A . R 7 HOH 79 156 156 HOH HOH A . R 7 HOH 80 157 157 HOH HOH A . R 7 HOH 81 158 158 HOH HOH A . R 7 HOH 82 159 120 HOH HOH A . S 7 HOH 1 12 12 HOH HOH B . S 7 HOH 2 16 16 HOH HOH B . S 7 HOH 3 18 18 HOH HOH B . S 7 HOH 4 21 21 HOH HOH B . S 7 HOH 5 90 33 HOH HOH B . S 7 HOH 6 91 44 HOH HOH B . S 7 HOH 7 92 92 HOH HOH B . S 7 HOH 8 93 46 HOH HOH B . S 7 HOH 9 94 52 HOH HOH B . S 7 HOH 10 95 55 HOH HOH B . S 7 HOH 11 96 57 HOH HOH B . S 7 HOH 12 97 97 HOH HOH B . S 7 HOH 13 98 64 HOH HOH B . S 7 HOH 14 99 81 HOH HOH B . S 7 HOH 15 100 86 HOH HOH B . S 7 HOH 16 101 88 HOH HOH B . S 7 HOH 17 102 102 HOH HOH B . S 7 HOH 18 108 108 HOH HOH B . S 7 HOH 19 114 114 HOH HOH B . S 7 HOH 20 115 115 HOH HOH B . S 7 HOH 21 116 116 HOH HOH B . S 7 HOH 22 150 150 HOH HOH B . S 7 HOH 23 151 151 HOH HOH B . S 7 HOH 24 159 159 HOH HOH B . S 7 HOH 25 160 160 HOH HOH B . S 7 HOH 26 161 161 HOH HOH B . S 7 HOH 27 162 162 HOH HOH B . S 7 HOH 28 163 163 HOH HOH B . S 7 HOH 29 164 164 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CBASS 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 3SKI _cell.length_a 34.930 _cell.length_b 47.795 _cell.length_c 228.281 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3SKI _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3SKI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.17 _exptl_crystal.density_percent_sol 43.35 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_details ;0.05 M Na-acetate or Na-succinate, pH 4.7-5.1, ~3.0 M ammonium sulfate, 0.5 mM spermine and 20 mM magnesium chloride, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-04-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.080901 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.080901 # _reflns.entry_id 3SKI _reflns.observed_criterion_sigma_I 2.5 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 20 _reflns.d_resolution_high 2.3 _reflns.number_obs 16645 _reflns.number_all 17879 _reflns.percent_possible_obs 93.1 _reflns.pdbx_Rmerge_I_obs 0.079 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.3 _reflns_shell.d_res_low 2.35 _reflns_shell.percent_possible_all 89.4 _reflns_shell.Rmerge_I_obs 0.278 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 5.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1049 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3SKI _refine.ls_number_reflns_obs 14911 _refine.ls_number_reflns_all 16009 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 93.14 _refine.ls_R_factor_obs 0.25616 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.25338 _refine.ls_R_factor_R_free 0.28134 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.1 _refine.ls_number_reflns_R_free 1678 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.932 _refine.correlation_coeff_Fo_to_Fc_free 0.919 _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.00 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.314 _refine.overall_SU_ML 0.208 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2903 _refine_hist.pdbx_number_atoms_ligand 90 _refine_hist.number_atoms_solvent 111 _refine_hist.number_atoms_total 3104 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.006 0.021 ? 3324 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 0.983 3.000 ? 5167 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_chiral_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.003 0.020 ? 1432 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined 0.141 0.200 ? 1167 ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined 0.267 0.200 ? 2012 ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined 0.136 0.200 ? 148 ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined 0.164 0.200 ? 53 ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined 0.195 0.200 ? 7 ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.302 _refine_ls_shell.d_res_low 2.361 _refine_ls_shell.number_reflns_R_work 1021 _refine_ls_shell.R_factor_R_work 0.377 _refine_ls_shell.percent_reflns_obs 89.08 _refine_ls_shell.R_factor_R_free 0.415 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 121 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3SKI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3SKI _struct.title ;Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'-deoxyguanosine ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3SKI _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'three-way junction, Riboswitch, deoxyguanosine, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 6 ? I N N 6 ? J N N 6 ? K N N 6 ? L N N 6 ? M N N 3 ? N N N 4 ? O N N 6 ? P N N 6 ? Q N N 6 ? R N N 7 ? S N N 7 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 PDB 3SKI 3SKI 1 ? ? ? 2 PDB 3SKI 3SKI 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3SKI A 1 ? 68 ? 3SKI 22 ? 89 ? 22 89 2 2 3SKI B 1 ? 68 ? 3SKI 22 ? 89 ? 22 89 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4590 ? 1 MORE -105 ? 1 'SSA (A^2)' 22350 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GTP 1 "O3'" ? ? ? 1_555 A G 2 P ? ? A GTP 22 A G 23 1_555 ? ? ? ? ? ? ? 1.595 ? ? covale2 covale both ? A U 67 "O3'" ? ? ? 1_555 A CCC 68 P ? ? A U 88 A CCC 89 1_555 ? ? ? ? ? ? ? 1.600 ? ? covale3 covale both ? B U 67 "O3'" ? ? ? 1_555 B CCC 68 P ? ? B U 88 B CCC 89 1_555 ? ? ? ? ? ? ? 1.598 ? ? hydrog1 hydrog ? ? A GTP 1 N1 ? ? ? 1_555 A CCC 68 N3 ? ? A GTP 22 A CCC 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A GTP 1 N2 ? ? ? 1_555 A CCC 68 O2 ? ? A GTP 22 A CCC 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A GTP 1 O6 ? ? ? 1_555 A CCC 68 N4 ? ? A GTP 22 A CCC 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A U 67 O2 ? ? A G 23 A U 88 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? A G 2 O6 ? ? ? 1_555 A U 67 N3 ? ? A G 23 A U 88 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog6 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 66 N1 ? ? A C 24 A G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 66 O6 ? ? A C 24 A G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 66 N2 ? ? A C 24 A G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 65 N1 ? ? A C 25 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 65 O6 ? ? A C 25 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 65 N2 ? ? A C 25 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A U 5 N3 ? ? ? 1_555 A A 64 N1 ? ? A U 26 A A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A U 5 O4 ? ? ? 1_555 A A 64 N6 ? ? A U 26 A A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 63 N1 ? ? A U 27 A A 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 63 N6 ? ? A U 27 A A 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A A 7 N1 ? ? ? 1_555 A U 62 N3 ? ? A A 28 A U 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A A 7 N6 ? ? ? 1_555 A U 62 O4 ? ? A A 28 A U 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 61 N1 ? ? A U 29 A A 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A U 8 O4 ? ? ? 1_555 A A 61 N6 ? ? A U 29 A A 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A A 9 N1 ? ? ? 1_555 A U 60 N3 ? ? A A 30 A U 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A A 9 N6 ? ? ? 1_555 A U 60 O4 ? ? A A 30 A U 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 10 N3 ? ? ? 1_555 A G 38 N1 ? ? A C 31 A G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A C 10 N4 ? ? ? 1_555 A G 38 O6 ? ? A C 31 A G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A C 10 O2 ? ? ? 1_555 A G 38 N2 ? ? A C 31 A G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A A 11 N1 ? ? ? 1_555 A G 32 N2 ? ? A A 32 A G 53 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog26 hydrog ? ? A G 12 N2 ? ? ? 1_555 A G 13 O6 ? ? A G 33 A G 34 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog27 hydrog ? ? A G 12 N2 ? ? ? 1_555 A U 31 O4 ? ? A G 33 A U 52 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog28 hydrog ? ? A G 13 N1 ? ? ? 1_555 A U 31 O2 ? ? A G 34 A U 52 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog29 hydrog ? ? A G 13 O6 ? ? ? 1_555 A U 31 N3 ? ? A G 34 A U 52 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog30 hydrog ? ? A G 14 N1 ? ? ? 1_555 A C 30 N3 ? ? A G 35 A C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 14 N2 ? ? ? 1_555 A C 30 O2 ? ? A G 35 A C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 14 O6 ? ? ? 1_555 A C 30 N4 ? ? A G 35 A C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A U 15 N3 ? ? ? 1_555 A A 29 N1 ? ? A U 36 A A 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A U 15 O4 ? ? ? 1_555 A A 29 N6 ? ? A U 36 A A 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A A 16 N1 ? ? ? 1_555 A U 28 N3 ? ? A A 37 A U 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A A 16 N6 ? ? ? 1_555 A U 28 O4 ? ? A A 37 A U 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 27 N3 ? ? A G 38 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 27 O2 ? ? A G 38 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 27 N4 ? ? A G 38 A C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 18 N3 ? ? ? 1_555 A G 26 N1 ? ? A C 39 A G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 18 N4 ? ? ? 1_555 A G 26 O6 ? ? A C 39 A G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 18 O2 ? ? ? 1_555 A G 26 N2 ? ? A C 39 A G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A A 21 N1 ? ? ? 1_555 A G 24 N2 ? ? A A 42 A G 45 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog44 hydrog ? ? A G 24 N1 ? ? ? 1_555 A C 48 N3 ? ? A G 45 A C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 24 N2 ? ? ? 1_555 A C 48 O2 ? ? A G 45 A C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A G 24 O6 ? ? ? 1_555 A C 48 N4 ? ? A G 45 A C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 25 N1 ? ? ? 1_555 A C 47 N3 ? ? A G 46 A C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 25 N2 ? ? ? 1_555 A C 47 O2 ? ? A G 46 A C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 25 O6 ? ? ? 1_555 A C 47 N4 ? ? A G 46 A C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 32 N1 ? ? ? 1_555 A C 39 N3 ? ? A G 53 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 32 N2 ? ? ? 1_555 A C 39 O2 ? ? A G 53 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 32 O6 ? ? ? 1_555 A C 39 N4 ? ? A G 53 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A C 36 N4 ? ? ? 1_555 A U 60 O2 ? ? A C 57 A U 81 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog54 hydrog ? ? A C 40 N3 ? ? ? 1_555 A G 57 N1 ? ? A C 61 A G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A C 40 N4 ? ? ? 1_555 A G 57 O6 ? ? A C 61 A G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A C 40 O2 ? ? ? 1_555 A G 57 N2 ? ? A C 61 A G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A U 41 N3 ? ? ? 1_555 A A 56 N1 ? ? A U 62 A A 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A U 41 O4 ? ? ? 1_555 A A 56 N6 ? ? A U 62 A A 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A U 42 N3 ? ? ? 1_555 A G 55 O6 ? ? A U 63 A G 76 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog60 hydrog ? ? A U 42 O2 ? ? ? 1_555 A G 55 N1 ? ? A U 63 A G 76 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog61 hydrog ? ? A C 43 N3 ? ? ? 1_555 A G 54 N1 ? ? A C 64 A G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A C 43 N4 ? ? ? 1_555 A G 54 O6 ? ? A C 64 A G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 43 O2 ? ? ? 1_555 A G 54 N2 ? ? A C 64 A G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A A 44 N1 ? ? ? 1_555 A U 53 N3 ? ? A A 65 A U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A A 44 N6 ? ? ? 1_555 A U 53 O4 ? ? A A 65 A U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A A 45 N1 ? ? ? 1_555 A U 52 N3 ? ? A A 66 A U 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A A 45 N6 ? ? ? 1_555 A U 52 O4 ? ? A A 66 A U 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A A 46 N1 ? ? ? 1_555 A U 51 N3 ? ? A A 67 A U 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A A 46 N6 ? ? ? 1_555 A U 51 O4 ? ? A A 67 A U 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? B G 1 N1 ? ? ? 1_555 B CCC 68 N3 ? ? B G 22 B CCC 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? B G 1 N2 ? ? ? 1_555 B CCC 68 O2 ? ? B G 22 B CCC 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? B G 1 O6 ? ? ? 1_555 B CCC 68 N4 ? ? B G 22 B CCC 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? B G 2 N1 ? ? ? 1_555 B U 67 O2 ? ? B G 23 B U 88 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog74 hydrog ? ? B G 2 O6 ? ? ? 1_555 B U 67 N3 ? ? B G 23 B U 88 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog75 hydrog ? ? B C 3 N3 ? ? ? 1_555 B G 66 N1 ? ? B C 24 B G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? B C 3 N4 ? ? ? 1_555 B G 66 O6 ? ? B C 24 B G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? B C 3 O2 ? ? ? 1_555 B G 66 N2 ? ? B C 24 B G 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 65 N1 ? ? B C 25 B G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 65 O6 ? ? B C 25 B G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 65 N2 ? ? B C 25 B G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? B U 5 N3 ? ? ? 1_555 B A 64 N1 ? ? B U 26 B A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? B U 5 O4 ? ? ? 1_555 B A 64 N6 ? ? B U 26 B A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? B U 6 N3 ? ? ? 1_555 B A 63 N1 ? ? B U 27 B A 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? B U 6 O4 ? ? ? 1_555 B A 63 N6 ? ? B U 27 B A 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? B A 7 N1 ? ? ? 1_555 B U 62 N3 ? ? B A 28 B U 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? B A 7 N6 ? ? ? 1_555 B U 62 O4 ? ? B A 28 B U 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? B U 8 N3 ? ? ? 1_555 B A 61 N1 ? ? B U 29 B A 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? B U 8 O4 ? ? ? 1_555 B A 61 N6 ? ? B U 29 B A 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? B A 9 N1 ? ? ? 1_555 B U 60 N3 ? ? B A 30 B U 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? B A 9 N6 ? ? ? 1_555 B U 60 O4 ? ? B A 30 B U 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? B C 10 N3 ? ? ? 1_555 B G 38 N1 ? ? B C 31 B G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? B C 10 N4 ? ? ? 1_555 B G 38 O6 ? ? B C 31 B G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? B C 10 O2 ? ? ? 1_555 B G 38 N2 ? ? B C 31 B G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? B A 11 N1 ? ? ? 1_555 B G 32 N2 ? ? B A 32 B G 53 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog95 hydrog ? ? B G 12 N2 ? ? ? 1_555 B G 13 O6 ? ? B G 33 B G 34 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog96 hydrog ? ? B G 12 N2 ? ? ? 1_555 B U 31 O4 ? ? B G 33 B U 52 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog97 hydrog ? ? B G 13 N1 ? ? ? 1_555 B U 31 O2 ? ? B G 34 B U 52 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog98 hydrog ? ? B G 13 O6 ? ? ? 1_555 B U 31 N3 ? ? B G 34 B U 52 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog99 hydrog ? ? B G 14 N1 ? ? ? 1_555 B C 30 N3 ? ? B G 35 B C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? B G 14 N2 ? ? ? 1_555 B C 30 O2 ? ? B G 35 B C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? B G 14 O6 ? ? ? 1_555 B C 30 N4 ? ? B G 35 B C 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? B U 15 N3 ? ? ? 1_555 B A 29 N1 ? ? B U 36 B A 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? B U 15 O4 ? ? ? 1_555 B A 29 N6 ? ? B U 36 B A 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? B A 16 N1 ? ? ? 1_555 B U 28 N3 ? ? B A 37 B U 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? B A 16 N6 ? ? ? 1_555 B U 28 O4 ? ? B A 37 B U 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? B G 17 N1 ? ? ? 1_555 B C 27 N3 ? ? B G 38 B C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? B G 17 N2 ? ? ? 1_555 B C 27 O2 ? ? B G 38 B C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? B G 17 O6 ? ? ? 1_555 B C 27 N4 ? ? B G 38 B C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? B C 18 N3 ? ? ? 1_555 B G 26 N1 ? ? B C 39 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? B C 18 N4 ? ? ? 1_555 B G 26 O6 ? ? B C 39 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? B C 18 O2 ? ? ? 1_555 B G 26 N2 ? ? B C 39 B G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? B A 21 N1 ? ? ? 1_555 B G 24 N2 ? ? B A 42 B G 45 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog113 hydrog ? ? B G 24 N1 ? ? ? 1_555 B C 48 N3 ? ? B G 45 B C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? B G 24 N2 ? ? ? 1_555 B C 48 O2 ? ? B G 45 B C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? B G 24 O6 ? ? ? 1_555 B C 48 N4 ? ? B G 45 B C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? B G 25 N1 ? ? ? 1_555 B C 47 N3 ? ? B G 46 B C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? B G 25 N2 ? ? ? 1_555 B C 47 O2 ? ? B G 46 B C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? B G 25 O6 ? ? ? 1_555 B C 47 N4 ? ? B G 46 B C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? B G 32 N1 ? ? ? 1_555 B C 39 N3 ? ? B G 53 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? B G 32 N2 ? ? ? 1_555 B C 39 O2 ? ? B G 53 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? B G 32 O6 ? ? ? 1_555 B C 39 N4 ? ? B G 53 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? B C 36 N4 ? ? ? 1_555 B U 60 O2 ? ? B C 57 B U 81 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog123 hydrog ? ? B C 40 N3 ? ? ? 1_555 B G 57 N1 ? ? B C 61 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? B C 40 N4 ? ? ? 1_555 B G 57 O6 ? ? B C 61 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? B C 40 O2 ? ? ? 1_555 B G 57 N2 ? ? B C 61 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? B U 41 N3 ? ? ? 1_555 B A 56 N1 ? ? B U 62 B A 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? B U 41 O4 ? ? ? 1_555 B A 56 N6 ? ? B U 62 B A 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? B U 42 N3 ? ? ? 1_555 B G 55 O6 ? ? B U 63 B G 76 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog129 hydrog ? ? B U 42 O2 ? ? ? 1_555 B G 55 N1 ? ? B U 63 B G 76 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog130 hydrog ? ? B C 43 N3 ? ? ? 1_555 B G 54 N1 ? ? B C 64 B G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? B C 43 N4 ? ? ? 1_555 B G 54 O6 ? ? B C 64 B G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? B C 43 O2 ? ? ? 1_555 B G 54 N2 ? ? B C 64 B G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? B A 44 N1 ? ? ? 1_555 B U 53 N3 ? ? B A 65 B U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? B A 44 N6 ? ? ? 1_555 B U 53 O4 ? ? B A 65 B U 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? B A 45 N1 ? ? ? 1_555 B U 52 N3 ? ? B A 66 B U 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? B A 45 N6 ? ? ? 1_555 B U 52 O4 ? ? B A 66 B U 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? B A 46 N1 ? ? ? 1_555 B U 51 N3 ? ? B A 67 B U 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? B A 46 N6 ? ? ? 1_555 B U 51 O4 ? ? B A 67 B U 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GNG 120 ? 12 'BINDING SITE FOR RESIDUE GNG A 120' AC2 Software B GNG 120 ? 9 'BINDING SITE FOR RESIDUE GNG B 120' AC3 Software A MG 204 ? 5 'BINDING SITE FOR RESIDUE MG A 204' AC4 Software B MG 206 ? 2 'BINDING SITE FOR RESIDUE MG B 206' AC5 Software A MG 228 ? 2 'BINDING SITE FOR RESIDUE MG A 228' AC6 Software A SIN 301 ? 1 'BINDING SITE FOR RESIDUE SIN A 301' AC7 Software A SO4 211 ? 3 'BINDING SITE FOR RESIDUE SO4 A 211' AC8 Software A SO4 212 ? 3 'BINDING SITE FOR RESIDUE SO4 A 212' AC9 Software A SO4 213 ? 5 'BINDING SITE FOR RESIDUE SO4 A 213' BC1 Software B SO4 214 ? 2 'BINDING SITE FOR RESIDUE SO4 B 214' BC2 Software A SO4 216 ? 4 'BINDING SITE FOR RESIDUE SO4 A 216' BC3 Software B SO4 217 ? 3 'BINDING SITE FOR RESIDUE SO4 B 217' BC4 Software B SO4 219 ? 2 'BINDING SITE FOR RESIDUE SO4 B 219' BC5 Software A SO4 229 ? 1 'BINDING SITE FOR RESIDUE SO4 A 229' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 HOH R . ? HOH A 4 . ? 1_555 ? 2 AC1 12 A A 9 ? A A 30 . ? 1_555 ? 3 AC1 12 C A 10 ? C A 31 . ? 1_555 ? 4 AC1 12 C A 35 ? C A 56 . ? 1_555 ? 5 AC1 12 C A 36 ? C A 57 . ? 1_555 ? 6 AC1 12 C A 37 ? C A 58 . ? 1_555 ? 7 AC1 12 G A 38 ? G A 59 . ? 1_555 ? 8 AC1 12 C A 59 ? C A 80 . ? 1_555 ? 9 AC1 12 U A 60 ? U A 81 . ? 1_555 ? 10 AC1 12 A A 61 ? A A 82 . ? 1_555 ? 11 AC1 12 HOH R . ? HOH A 117 . ? 1_555 ? 12 AC1 12 HOH R . ? HOH A 145 . ? 1_555 ? 13 AC2 9 A B 9 ? A B 30 . ? 1_555 ? 14 AC2 9 C B 10 ? C B 31 . ? 1_555 ? 15 AC2 9 C B 34 ? C B 55 . ? 1_555 ? 16 AC2 9 C B 35 ? C B 56 . ? 1_555 ? 17 AC2 9 C B 36 ? C B 57 . ? 1_555 ? 18 AC2 9 C B 37 ? C B 58 . ? 1_555 ? 19 AC2 9 G B 38 ? G B 59 . ? 1_555 ? 20 AC2 9 C B 59 ? C B 80 . ? 1_555 ? 21 AC2 9 U B 60 ? U B 81 . ? 1_555 ? 22 AC3 5 HOH R . ? HOH A 15 . ? 1_555 ? 23 AC3 5 A A 9 ? A A 30 . ? 1_555 ? 24 AC3 5 C A 10 ? C A 31 . ? 1_555 ? 25 AC3 5 A A 11 ? A A 32 . ? 1_555 ? 26 AC3 5 G A 32 ? G A 53 . ? 1_555 ? 27 AC4 2 A B 46 ? A B 67 . ? 1_555 ? 28 AC4 2 HOH S . ? HOH B 99 . ? 1_555 ? 29 AC5 2 C A 37 ? C A 58 . ? 1_555 ? 30 AC5 2 G A 38 ? G A 59 . ? 1_555 ? 31 AC6 1 C A 36 ? C A 57 . ? 1_555 ? 32 AC7 3 C A 3 ? C A 24 . ? 1_555 ? 33 AC7 3 C A 4 ? C A 25 . ? 1_555 ? 34 AC7 3 HOH R . ? HOH A 123 . ? 1_555 ? 35 AC8 3 C A 43 ? C A 64 . ? 1_555 ? 36 AC8 3 A A 44 ? A A 65 . ? 1_555 ? 37 AC8 3 HOH R . ? HOH A 130 . ? 1_555 ? 38 AC9 5 A A 9 ? A A 30 . ? 1_555 ? 39 AC9 5 A A 58 ? A A 79 . ? 1_555 ? 40 AC9 5 C A 59 ? C A 80 . ? 1_555 ? 41 AC9 5 HOH R . ? HOH A 92 . ? 1_555 ? 42 AC9 5 HOH R . ? HOH A 114 . ? 1_555 ? 43 BC1 2 C B 3 ? C B 24 . ? 1_555 ? 44 BC1 2 C B 4 ? C B 25 . ? 1_555 ? 45 BC2 4 C A 18 ? C A 39 . ? 1_555 ? 46 BC2 4 A A 19 ? A A 40 . ? 1_555 ? 47 BC2 4 U A 20 ? U A 41 . ? 1_555 ? 48 BC2 4 HOH R . ? HOH A 151 . ? 1_555 ? 49 BC3 3 U B 42 ? U B 63 . ? 1_555 ? 50 BC3 3 C B 43 ? C B 64 . ? 1_555 ? 51 BC3 3 A B 44 ? A B 65 . ? 1_555 ? 52 BC4 2 C B 18 ? C B 39 . ? 1_555 ? 53 BC4 2 A B 19 ? A B 40 . ? 1_555 ? 54 BC5 1 C A 47 ? C A 68 . ? 1_555 ? # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A GTP 1 A GTP 22 ? G "GUANOSINE-5'-TRIPHOSPHATE" 2 A CCC 68 A CCC 89 ? C ? 3 B CCC 68 B CCC 89 ? C ? # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -1.6850 0.8200 -71.0300 -0.0479 -0.2088 -0.0433 0.0393 -0.0655 -0.0652 2.8795 6.0832 1.9736 0.6804 -0.1266 3.3841 0.3311 0.6550 -0.2070 -0.0445 0.2055 -0.1763 0.0948 0.2804 -0.5366 'X-RAY DIFFRACTION' 2 ? refined -9.3510 3.6970 -42.7560 -0.1284 -0.3713 -0.0507 -0.0832 0.0051 0.0310 1.2661 0.1322 5.2996 -0.3860 -1.8066 0.3522 -0.1173 0.0060 0.0303 -0.0147 0.1218 0.0139 0.2250 -0.3219 -0.0044 'X-RAY DIFFRACTION' 3 ? refined 4.5830 -0.6650 -42.4610 -0.1179 -0.1607 -0.1033 -0.0589 0.0143 0.0293 2.2288 1.2453 2.4269 -0.7278 0.0303 0.7949 -0.0740 -0.3104 -0.1283 -0.2036 0.3427 0.0818 -0.1635 0.5471 -0.2687 'X-RAY DIFFRACTION' 4 ? refined -0.9110 0.0390 24.5240 0.4151 0.2419 -0.1289 -0.0440 -0.0569 0.0544 3.9118 5.2935 18.5109 0.7056 3.4110 5.3826 0.8536 0.6486 0.2399 -0.1163 0.1144 -0.3147 2.3736 -0.5355 -0.9680 'X-RAY DIFFRACTION' 5 ? refined -9.0260 -1.7460 -3.5660 0.0868 -0.0408 -0.0601 -0.0636 0.0237 -0.0097 2.8171 2.3790 9.7111 0.6493 2.8087 -0.4020 0.3411 -0.5201 0.0722 0.6086 -0.0426 -0.0383 0.5862 -0.6287 -0.2985 'X-RAY DIFFRACTION' 6 ? refined 4.6830 3.1970 -3.5140 0.2538 0.0797 -0.0564 -0.0235 0.0964 0.0139 5.5962 1.4716 0.1431 -0.0382 -0.7230 -0.2654 0.4406 -0.6005 -0.0438 0.6609 0.0380 0.0264 -0.1261 0.7141 -0.4786 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 22 ? ? A 30 ? ? ? ? 'X-RAY DIFFRACTION' 2 1 A 81 ? ? A 89 ? ? ? ? 'X-RAY DIFFRACTION' 3 2 A 120 ? ? A 120 ? ? ? ? 'X-RAY DIFFRACTION' 4 2 A 31 ? ? A 60 ? ? ? ? 'X-RAY DIFFRACTION' 5 3 A 61 ? ? A 80 ? ? ? ? 'X-RAY DIFFRACTION' 6 4 B 22 ? ? B 30 ? ? ? ? 'X-RAY DIFFRACTION' 7 4 B 81 ? ? B 89 ? ? ? ? 'X-RAY DIFFRACTION' 8 5 B 120 ? ? B 120 ? ? ? ? 'X-RAY DIFFRACTION' 9 5 B 31 ? ? B 60 ? ? ? ? 'X-RAY DIFFRACTION' 10 6 B 61 ? ? B 80 ? ? ? ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 CCC PC P N S 73 CCC O1C O N N 74 CCC O2C O N N 75 CCC P P N N 76 CCC OP1 O N N 77 CCC OP2 O N N 78 CCC OP3 O N N 79 CCC "O5'" O N N 80 CCC "C5'" C N N 81 CCC "C4'" C N R 82 CCC "O4'" O N N 83 CCC "C3'" C N R 84 CCC "O3'" O N N 85 CCC "C2'" C N R 86 CCC "O2'" O N N 87 CCC "C1'" C N R 88 CCC N1 N N N 89 CCC C2 C N N 90 CCC O2 O N N 91 CCC N3 N N N 92 CCC C4 C N N 93 CCC N4 N N N 94 CCC C5 C N N 95 CCC C6 C N N 96 CCC HOC2 H N N 97 CCC HOP2 H N N 98 CCC HOP3 H N N 99 CCC "H5'" H N N 100 CCC "H5''" H N N 101 CCC "H4'" H N N 102 CCC "H3'" H N N 103 CCC "H2'" H N N 104 CCC "H1'" H N N 105 CCC H41 H N N 106 CCC H42 H N N 107 CCC H5 H N N 108 CCC H6 H N N 109 G OP3 O N N 110 G P P N N 111 G OP1 O N N 112 G OP2 O N N 113 G "O5'" O N N 114 G "C5'" C N N 115 G "C4'" C N R 116 G "O4'" O N N 117 G "C3'" C N S 118 G "O3'" O N N 119 G "C2'" C N R 120 G "O2'" O N N 121 G "C1'" C N R 122 G N9 N Y N 123 G C8 C Y N 124 G N7 N Y N 125 G C5 C Y N 126 G C6 C N N 127 G O6 O N N 128 G N1 N N N 129 G C2 C N N 130 G N2 N N N 131 G N3 N N N 132 G C4 C Y N 133 G HOP3 H N N 134 G HOP2 H N N 135 G "H5'" H N N 136 G "H5''" H N N 137 G "H4'" H N N 138 G "H3'" H N N 139 G "HO3'" H N N 140 G "H2'" H N N 141 G "HO2'" H N N 142 G "H1'" H N N 143 G H8 H N N 144 G H1 H N N 145 G H21 H N N 146 G H22 H N N 147 GNG "O5'" O N N 148 GNG "C5'" C N N 149 GNG "C4'" C N R 150 GNG "O4'" O N N 151 GNG "C1'" C N R 152 GNG N9 N Y N 153 GNG C8 C Y N 154 GNG N7 N Y N 155 GNG C5 C Y N 156 GNG C4 C Y N 157 GNG N3 N N N 158 GNG C2 C N N 159 GNG N1 N N N 160 GNG C6 C N N 161 GNG O6 O N N 162 GNG N2 N N N 163 GNG "C2'" C N N 164 GNG "C3'" C N S 165 GNG "O3'" O N N 166 GNG "H5'" H N N 167 GNG "H5'1" H N N 168 GNG "H5'2" H N N 169 GNG "H4'" H N N 170 GNG "H1'" H N N 171 GNG H8 H N N 172 GNG HN3 H N N 173 GNG HN21 H N N 174 GNG HN22 H N N 175 GNG "H2'1" H N N 176 GNG "H2'2" H N N 177 GNG "H3'" H N N 178 GNG H1 H N N 179 GTP PG P N N 180 GTP O1G O N N 181 GTP O2G O N N 182 GTP O3G O N N 183 GTP O3B O N N 184 GTP PB P N N 185 GTP O1B O N N 186 GTP O2B O N N 187 GTP O3A O N N 188 GTP PA P N N 189 GTP O1A O N N 190 GTP O2A O N N 191 GTP "O5'" O N N 192 GTP "C5'" C N N 193 GTP "C4'" C N R 194 GTP "O4'" O N N 195 GTP "C3'" C N S 196 GTP "O3'" O N N 197 GTP "C2'" C N R 198 GTP "O2'" O N N 199 GTP "C1'" C N R 200 GTP N9 N Y N 201 GTP C8 C Y N 202 GTP N7 N Y N 203 GTP C5 C Y N 204 GTP C6 C N N 205 GTP O6 O N N 206 GTP N1 N N N 207 GTP C2 C N N 208 GTP N2 N N N 209 GTP N3 N N N 210 GTP C4 C Y N 211 GTP HOG2 H N N 212 GTP HOG3 H N N 213 GTP HOB2 H N N 214 GTP HOA2 H N N 215 GTP "H5'" H N N 216 GTP "H5''" H N N 217 GTP "H4'" H N N 218 GTP "H3'" H N N 219 GTP "HO3'" H N N 220 GTP "H2'" H N N 221 GTP "HO2'" H N N 222 GTP "H1'" H N N 223 GTP H8 H N N 224 GTP HN1 H N N 225 GTP HN21 H N N 226 GTP HN22 H N N 227 HOH O O N N 228 HOH H1 H N N 229 HOH H2 H N N 230 MG MG MG N N 231 SIN C1 C N N 232 SIN O1 O N N 233 SIN O2 O N N 234 SIN C2 C N N 235 SIN C3 C N N 236 SIN C4 C N N 237 SIN O3 O N N 238 SIN O4 O N N 239 SIN HO2 H N N 240 SIN H21 H N N 241 SIN H22 H N N 242 SIN H31 H N N 243 SIN H32 H N N 244 SIN HO4 H N N 245 SO4 S S N N 246 SO4 O1 O N N 247 SO4 O2 O N N 248 SO4 O3 O N N 249 SO4 O4 O N N 250 U OP3 O N N 251 U P P N N 252 U OP1 O N N 253 U OP2 O N N 254 U "O5'" O N N 255 U "C5'" C N N 256 U "C4'" C N R 257 U "O4'" O N N 258 U "C3'" C N S 259 U "O3'" O N N 260 U "C2'" C N R 261 U "O2'" O N N 262 U "C1'" C N R 263 U N1 N N N 264 U C2 C N N 265 U O2 O N N 266 U N3 N N N 267 U C4 C N N 268 U O4 O N N 269 U C5 C N N 270 U C6 C N N 271 U HOP3 H N N 272 U HOP2 H N N 273 U "H5'" H N N 274 U "H5''" H N N 275 U "H4'" H N N 276 U "H3'" H N N 277 U "HO3'" H N N 278 U "H2'" H N N 279 U "HO2'" H N N 280 U "H1'" H N N 281 U H3 H N N 282 U H5 H N N 283 U H6 H N N 284 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 CCC PC O1C doub N N 76 CCC PC O2C sing N N 77 CCC PC "O3'" sing N N 78 CCC PC "O2'" sing N N 79 CCC O2C HOC2 sing N N 80 CCC P OP1 doub N N 81 CCC P OP2 sing N N 82 CCC P OP3 sing N N 83 CCC P "O5'" sing N N 84 CCC OP2 HOP2 sing N N 85 CCC OP3 HOP3 sing N N 86 CCC "O5'" "C5'" sing N N 87 CCC "C5'" "C4'" sing N N 88 CCC "C5'" "H5'" sing N N 89 CCC "C5'" "H5''" sing N N 90 CCC "C4'" "O4'" sing N N 91 CCC "C4'" "C3'" sing N N 92 CCC "C4'" "H4'" sing N N 93 CCC "O4'" "C1'" sing N N 94 CCC "C3'" "O3'" sing N N 95 CCC "C3'" "C2'" sing N N 96 CCC "C3'" "H3'" sing N N 97 CCC "C2'" "O2'" sing N N 98 CCC "C2'" "C1'" sing N N 99 CCC "C2'" "H2'" sing N N 100 CCC "C1'" N1 sing N N 101 CCC "C1'" "H1'" sing N N 102 CCC N1 C2 sing N N 103 CCC N1 C6 sing N N 104 CCC C2 O2 doub N N 105 CCC C2 N3 sing N N 106 CCC N3 C4 doub N N 107 CCC C4 N4 sing N N 108 CCC C4 C5 sing N N 109 CCC N4 H41 sing N N 110 CCC N4 H42 sing N N 111 CCC C5 C6 doub N N 112 CCC C5 H5 sing N N 113 CCC C6 H6 sing N N 114 G OP3 P sing N N 115 G OP3 HOP3 sing N N 116 G P OP1 doub N N 117 G P OP2 sing N N 118 G P "O5'" sing N N 119 G OP2 HOP2 sing N N 120 G "O5'" "C5'" sing N N 121 G "C5'" "C4'" sing N N 122 G "C5'" "H5'" sing N N 123 G "C5'" "H5''" sing N N 124 G "C4'" "O4'" sing N N 125 G "C4'" "C3'" sing N N 126 G "C4'" "H4'" sing N N 127 G "O4'" "C1'" sing N N 128 G "C3'" "O3'" sing N N 129 G "C3'" "C2'" sing N N 130 G "C3'" "H3'" sing N N 131 G "O3'" "HO3'" sing N N 132 G "C2'" "O2'" sing N N 133 G "C2'" "C1'" sing N N 134 G "C2'" "H2'" sing N N 135 G "O2'" "HO2'" sing N N 136 G "C1'" N9 sing N N 137 G "C1'" "H1'" sing N N 138 G N9 C8 sing Y N 139 G N9 C4 sing Y N 140 G C8 N7 doub Y N 141 G C8 H8 sing N N 142 G N7 C5 sing Y N 143 G C5 C6 sing N N 144 G C5 C4 doub Y N 145 G C6 O6 doub N N 146 G C6 N1 sing N N 147 G N1 C2 sing N N 148 G N1 H1 sing N N 149 G C2 N2 sing N N 150 G C2 N3 doub N N 151 G N2 H21 sing N N 152 G N2 H22 sing N N 153 G N3 C4 sing N N 154 GNG "O5'" "C5'" sing N N 155 GNG "O5'" "H5'" sing N N 156 GNG "C5'" "C4'" sing N N 157 GNG "C5'" "H5'1" sing N N 158 GNG "C5'" "H5'2" sing N N 159 GNG "C4'" "O4'" sing N N 160 GNG "C4'" "C3'" sing N N 161 GNG "C4'" "H4'" sing N N 162 GNG "O4'" "C1'" sing N N 163 GNG "C1'" N9 sing N N 164 GNG "C1'" "C2'" sing N N 165 GNG "C1'" "H1'" sing N N 166 GNG N9 C8 sing Y N 167 GNG N9 C4 sing Y N 168 GNG C8 N7 doub Y N 169 GNG C8 H8 sing N N 170 GNG N7 C5 sing Y N 171 GNG C5 C4 doub Y N 172 GNG C5 C6 sing N N 173 GNG C4 N3 sing N N 174 GNG N3 C2 sing N N 175 GNG N3 HN3 sing N N 176 GNG C2 N1 doub N N 177 GNG C2 N2 sing N N 178 GNG N1 C6 sing N N 179 GNG C6 O6 doub N N 180 GNG N2 HN21 sing N N 181 GNG N2 HN22 sing N N 182 GNG "C2'" "C3'" sing N N 183 GNG "C2'" "H2'1" sing N N 184 GNG "C2'" "H2'2" sing N N 185 GNG "C3'" "O3'" sing N N 186 GNG "C3'" "H3'" sing N N 187 GNG "O3'" H1 sing N N 188 GTP PG O1G doub N N 189 GTP PG O2G sing N N 190 GTP PG O3G sing N N 191 GTP PG O3B sing N N 192 GTP O2G HOG2 sing N N 193 GTP O3G HOG3 sing N N 194 GTP O3B PB sing N N 195 GTP PB O1B doub N N 196 GTP PB O2B sing N N 197 GTP PB O3A sing N N 198 GTP O2B HOB2 sing N N 199 GTP O3A PA sing N N 200 GTP PA O1A doub N N 201 GTP PA O2A sing N N 202 GTP PA "O5'" sing N N 203 GTP O2A HOA2 sing N N 204 GTP "O5'" "C5'" sing N N 205 GTP "C5'" "C4'" sing N N 206 GTP "C5'" "H5'" sing N N 207 GTP "C5'" "H5''" sing N N 208 GTP "C4'" "O4'" sing N N 209 GTP "C4'" "C3'" sing N N 210 GTP "C4'" "H4'" sing N N 211 GTP "O4'" "C1'" sing N N 212 GTP "C3'" "O3'" sing N N 213 GTP "C3'" "C2'" sing N N 214 GTP "C3'" "H3'" sing N N 215 GTP "O3'" "HO3'" sing N N 216 GTP "C2'" "O2'" sing N N 217 GTP "C2'" "C1'" sing N N 218 GTP "C2'" "H2'" sing N N 219 GTP "O2'" "HO2'" sing N N 220 GTP "C1'" N9 sing N N 221 GTP "C1'" "H1'" sing N N 222 GTP N9 C8 sing Y N 223 GTP N9 C4 sing Y N 224 GTP C8 N7 doub Y N 225 GTP C8 H8 sing N N 226 GTP N7 C5 sing Y N 227 GTP C5 C6 sing N N 228 GTP C5 C4 doub Y N 229 GTP C6 O6 doub N N 230 GTP C6 N1 sing N N 231 GTP N1 C2 sing N N 232 GTP N1 HN1 sing N N 233 GTP C2 N2 sing N N 234 GTP C2 N3 doub N N 235 GTP N2 HN21 sing N N 236 GTP N2 HN22 sing N N 237 GTP N3 C4 sing N N 238 HOH O H1 sing N N 239 HOH O H2 sing N N 240 SIN C1 O1 doub N N 241 SIN C1 O2 sing N N 242 SIN C1 C2 sing N N 243 SIN O2 HO2 sing N N 244 SIN C2 C3 sing N N 245 SIN C2 H21 sing N N 246 SIN C2 H22 sing N N 247 SIN C3 C4 sing N N 248 SIN C3 H31 sing N N 249 SIN C3 H32 sing N N 250 SIN C4 O3 doub N N 251 SIN C4 O4 sing N N 252 SIN O4 HO4 sing N N 253 SO4 S O1 doub N N 254 SO4 S O2 doub N N 255 SO4 S O3 sing N N 256 SO4 S O4 sing N N 257 U OP3 P sing N N 258 U OP3 HOP3 sing N N 259 U P OP1 doub N N 260 U P OP2 sing N N 261 U P "O5'" sing N N 262 U OP2 HOP2 sing N N 263 U "O5'" "C5'" sing N N 264 U "C5'" "C4'" sing N N 265 U "C5'" "H5'" sing N N 266 U "C5'" "H5''" sing N N 267 U "C4'" "O4'" sing N N 268 U "C4'" "C3'" sing N N 269 U "C4'" "H4'" sing N N 270 U "O4'" "C1'" sing N N 271 U "C3'" "O3'" sing N N 272 U "C3'" "C2'" sing N N 273 U "C3'" "H3'" sing N N 274 U "O3'" "HO3'" sing N N 275 U "C2'" "O2'" sing N N 276 U "C2'" "C1'" sing N N 277 U "C2'" "H2'" sing N N 278 U "O2'" "HO2'" sing N N 279 U "C1'" N1 sing N N 280 U "C1'" "H1'" sing N N 281 U N1 C2 sing N N 282 U N1 C6 sing N N 283 U C2 O2 doub N N 284 U C2 N3 sing N N 285 U N3 C4 sing N N 286 U N3 H3 sing N N 287 U C4 O4 doub N N 288 U C4 C5 sing N N 289 U C5 C6 doub N N 290 U C5 H5 sing N N 291 U C6 H6 sing N N 292 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3SKI 'double helix' 3SKI 'a-form double helix' 3SKI 'b-form double helix' 3SKI 'mismatched base pair' 3SKI 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A GTP 1 1_555 A CCC 68 1_555 -0.388 -0.170 -0.247 -9.920 -6.716 -1.089 1 A_GTP22:CCC89_A A 22 ? A 89 ? 19 1 1 A G 2 1_555 A U 67 1_555 -2.507 -0.514 0.269 8.271 -15.497 5.036 2 A_G23:U88_A A 23 ? A 88 ? 28 1 1 A C 3 1_555 A G 66 1_555 0.446 -0.253 -0.110 7.600 -18.778 -0.368 3 A_C24:G87_A A 24 ? A 87 ? 19 1 1 A C 4 1_555 A G 65 1_555 0.095 -0.247 0.214 -0.902 -15.439 -3.089 4 A_C25:G86_A A 25 ? A 86 ? 19 1 1 A U 5 1_555 A A 64 1_555 0.182 0.023 0.109 1.852 -12.786 5.809 5 A_U26:A85_A A 26 ? A 85 ? 20 1 1 A U 6 1_555 A A 63 1_555 -0.063 -0.122 -0.161 2.853 -15.847 -0.804 6 A_U27:A84_A A 27 ? A 84 ? 20 1 1 A A 7 1_555 A U 62 1_555 0.176 -0.097 0.026 -13.374 -20.167 6.917 7 A_A28:U83_A A 28 ? A 83 ? 20 1 1 A U 8 1_555 A A 61 1_555 -0.036 0.006 0.221 -6.614 -15.164 4.618 8 A_U29:A82_A A 29 ? A 82 ? 20 1 1 A A 9 1_555 A U 60 1_555 0.271 -0.206 0.102 10.932 1.036 -2.409 9 A_A30:U81_A A 30 ? A 81 ? 20 1 1 A G 26 1_555 A C 18 1_555 -0.479 -0.135 0.098 -7.867 -10.989 2.695 10 A_G47:C39_A A 47 ? A 39 ? 19 1 1 A C 27 1_555 A G 17 1_555 0.481 -0.417 -0.037 -0.785 -14.904 -1.846 11 A_C48:G38_A A 48 ? A 38 ? 19 1 1 A U 28 1_555 A A 16 1_555 0.022 -0.153 0.322 0.335 -7.435 2.640 12 A_U49:A37_A A 49 ? A 37 ? 20 1 1 A A 29 1_555 A U 15 1_555 -0.083 -0.237 0.130 5.801 -12.496 1.745 13 A_A50:U36_A A 50 ? A 36 ? 20 1 1 A C 30 1_555 A G 14 1_555 0.407 -0.162 -0.005 6.563 -16.462 1.699 14 A_C51:G35_A A 51 ? A 35 ? 19 1 1 A U 31 1_555 A G 13 1_555 2.566 -0.687 -0.103 -7.567 -16.813 4.226 15 A_U52:G34_A A 52 ? A 34 ? 28 1 1 A G 32 1_555 A C 39 1_555 -0.160 -0.232 0.337 11.607 -12.181 -3.321 16 A_G53:C60_A A 53 ? A 60 ? 19 1 1 A C 10 1_555 A G 38 1_555 0.400 -0.213 -0.303 6.554 -8.354 1.297 17 A_C31:G59_A A 31 ? A 59 ? 19 1 1 A G 24 1_555 A C 48 1_555 -0.246 -0.128 -0.235 -12.957 -8.868 4.548 18 A_G45:C69_A A 45 ? A 69 ? 19 1 1 A G 25 1_555 A C 47 1_555 -0.030 0.015 0.064 -12.321 -16.968 2.576 19 A_G46:C68_A A 46 ? A 68 ? 19 1 1 A U 51 1_555 A A 46 1_555 0.487 -0.218 -0.468 -0.301 -12.976 7.532 20 A_U72:A67_A A 72 ? A 67 ? 20 1 1 A U 52 1_555 A A 45 1_555 0.005 0.024 -0.169 -5.135 -15.306 0.212 21 A_U73:A66_A A 73 ? A 66 ? 20 1 1 A U 53 1_555 A A 44 1_555 -0.419 -0.041 0.100 2.539 -15.409 5.752 22 A_U74:A65_A A 74 ? A 65 ? 20 1 1 A G 54 1_555 A C 43 1_555 0.055 -0.257 -0.139 -5.163 -13.138 0.947 23 A_G75:C64_A A 75 ? A 64 ? 19 1 1 A G 55 1_555 A U 42 1_555 -1.943 -0.527 -0.225 -7.479 -4.163 -2.665 24 A_G76:U63_A A 76 ? A 63 ? 28 1 1 A A 56 1_555 A U 41 1_555 0.204 0.037 -0.036 6.212 -5.084 -0.504 25 A_A77:U62_A A 77 ? A 62 ? 20 1 1 A G 57 1_555 A C 40 1_555 -0.206 -0.222 -0.430 -4.884 -9.236 1.621 26 A_G78:C61_A A 78 ? A 61 ? 19 1 1 B G 1 1_555 B CCC 68 1_555 -0.001 -0.029 0.081 -1.417 0.228 0.467 27 B_G22:CCC89_B B 22 ? B 89 ? 19 1 1 B G 2 1_555 B U 67 1_555 -2.264 -0.541 0.093 5.365 -15.636 5.240 28 B_G23:U88_B B 23 ? B 88 ? 28 1 1 B C 3 1_555 B G 66 1_555 0.140 -0.057 -0.406 11.572 -17.171 5.824 29 B_C24:G87_B B 24 ? B 87 ? 19 1 1 B C 4 1_555 B G 65 1_555 0.642 -0.178 0.210 0.465 -13.716 4.316 30 B_C25:G86_B B 25 ? B 86 ? 19 1 1 B U 5 1_555 B A 64 1_555 -0.405 -0.218 0.065 1.632 -11.213 0.899 31 B_U26:A85_B B 26 ? B 85 ? 20 1 1 B U 6 1_555 B A 63 1_555 -0.168 -0.170 -0.128 3.057 -17.170 6.838 32 B_U27:A84_B B 27 ? B 84 ? 20 1 1 B A 7 1_555 B U 62 1_555 -0.066 -0.042 0.056 -10.548 -17.291 4.847 33 B_A28:U83_B B 28 ? B 83 ? 20 1 1 B U 8 1_555 B A 61 1_555 0.833 -0.197 0.321 -3.752 -13.925 1.058 34 B_U29:A82_B B 29 ? B 82 ? 20 1 1 B A 9 1_555 B U 60 1_555 0.188 0.042 0.180 7.172 -2.509 1.366 35 B_A30:U81_B B 30 ? B 81 ? 20 1 1 B G 26 1_555 B C 18 1_555 -0.521 -0.067 -0.149 -8.156 -13.256 3.451 36 B_G47:C39_B B 47 ? B 39 ? 19 1 1 B C 27 1_555 B G 17 1_555 0.733 -0.138 -0.183 2.445 -13.805 0.999 37 B_C48:G38_B B 48 ? B 38 ? 19 1 1 B U 28 1_555 B A 16 1_555 -0.024 -0.229 0.184 0.445 -10.355 -1.053 38 B_U49:A37_B B 49 ? B 37 ? 20 1 1 B A 29 1_555 B U 15 1_555 -0.400 -0.177 0.180 1.347 -15.074 1.942 39 B_A50:U36_B B 50 ? B 36 ? 20 1 1 B C 30 1_555 B G 14 1_555 0.435 0.034 0.018 7.009 -16.804 5.046 40 B_C51:G35_B B 51 ? B 35 ? 19 1 1 B U 31 1_555 B G 13 1_555 2.780 -0.801 -0.497 -2.715 -15.960 2.376 41 B_U52:G34_B B 52 ? B 34 ? 28 1 1 B G 32 1_555 B C 39 1_555 -0.079 0.002 0.432 13.091 -9.138 -1.369 42 B_G53:C60_B B 53 ? B 60 ? 19 1 1 B C 10 1_555 B G 38 1_555 0.846 -0.265 -0.258 14.902 -10.337 2.063 43 B_C31:G59_B B 31 ? B 59 ? 19 1 1 B G 24 1_555 B C 48 1_555 -0.559 -0.029 -0.051 -8.734 0.012 5.561 44 B_G45:C69_B B 45 ? B 69 ? 19 1 1 B G 25 1_555 B C 47 1_555 -0.414 -0.194 -0.615 -16.999 -15.118 4.463 45 B_G46:C68_B B 46 ? B 68 ? 19 1 1 B U 51 1_555 B A 46 1_555 -0.151 -0.110 -0.423 8.222 -4.067 7.694 46 B_U72:A67_B B 72 ? B 67 ? 20 1 1 B U 52 1_555 B A 45 1_555 -0.120 -0.202 -0.492 10.999 -10.905 -3.920 47 B_U73:A66_B B 73 ? B 66 ? 20 1 1 B U 53 1_555 B A 44 1_555 0.344 -0.231 -0.490 8.856 -7.988 0.799 48 B_U74:A65_B B 74 ? B 65 ? 20 1 1 B G 54 1_555 B C 43 1_555 -0.904 -0.445 -0.232 -10.854 -10.015 -0.418 49 B_G75:C64_B B 75 ? B 64 ? 19 1 1 B G 55 1_555 B U 42 1_555 -2.588 -0.686 -0.280 -5.266 -6.125 1.049 50 B_G76:U63_B B 76 ? B 63 ? 28 1 1 B A 56 1_555 B U 41 1_555 -0.406 -0.197 -0.432 -6.382 -6.175 -2.219 51 B_A77:U62_B B 77 ? B 62 ? 20 1 1 B G 57 1_555 B C 40 1_555 0.790 0.043 -0.368 -11.178 -9.113 3.643 52 B_G78:C61_B B 78 ? B 61 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A GTP 1 1_555 A CCC 68 1_555 A G 2 1_555 A U 67 1_555 0.079 -1.885 2.585 -8.759 10.358 20.621 -6.504 -1.951 1.356 25.659 21.698 24.643 1 AA_GTP22G23:U88CCC89_AA A 22 ? A 89 ? A 23 ? A 88 ? 1 A G 2 1_555 A U 67 1_555 A C 3 1_555 A G 66 1_555 -0.226 -0.992 3.266 1.071 7.138 44.694 -1.910 0.387 3.075 9.314 -1.397 45.243 2 AA_G23C24:G87U88_AA A 23 ? A 88 ? A 24 ? A 87 ? 1 A C 3 1_555 A G 66 1_555 A C 4 1_555 A G 65 1_555 -0.113 -2.114 3.350 -0.858 10.645 29.230 -5.813 0.060 2.450 20.261 1.633 31.080 3 AA_C24C25:G86G87_AA A 24 ? A 87 ? A 25 ? A 86 ? 1 A C 4 1_555 A G 65 1_555 A U 5 1_555 A A 64 1_555 0.043 -1.592 3.039 0.306 7.367 30.667 -4.129 -0.030 2.596 13.682 -0.569 31.521 4 AA_C25U26:A85G86_AA A 25 ? A 86 ? A 26 ? A 85 ? 1 A U 5 1_555 A A 64 1_555 A U 6 1_555 A A 63 1_555 -0.054 -1.592 3.160 0.852 6.252 29.084 -4.301 0.268 2.762 12.268 -1.672 29.746 5 AA_U26U27:A84A85_AA A 26 ? A 85 ? A 27 ? A 84 ? 1 A U 6 1_555 A A 63 1_555 A A 7 1_555 A U 62 1_555 0.491 -1.375 3.458 -0.188 16.457 35.577 -3.981 -0.756 2.595 25.330 0.290 39.087 6 AA_U27A28:U83A84_AA A 27 ? A 84 ? A 28 ? A 83 ? 1 A A 7 1_555 A U 62 1_555 A U 8 1_555 A A 61 1_555 -0.336 -1.273 3.063 -0.886 7.798 30.819 -3.598 0.469 2.677 14.383 1.634 31.779 7 AA_A28U29:A82U83_AA A 28 ? A 83 ? A 29 ? A 82 ? 1 A U 8 1_555 A A 61 1_555 A A 9 1_555 A U 60 1_555 0.301 -1.419 2.774 3.941 12.160 26.136 -4.869 0.061 1.958 25.070 -8.125 29.045 8 AA_U29A30:U81A82_AA A 29 ? A 82 ? A 30 ? A 81 ? 1 A G 26 1_555 A C 18 1_555 A C 27 1_555 A G 17 1_555 -0.807 -1.501 3.074 0.953 5.110 35.073 -3.144 1.453 2.812 8.422 -1.570 35.444 9 AA_G47C48:G38C39_AA A 47 ? A 39 ? A 48 ? A 38 ? 1 A C 27 1_555 A G 17 1_555 A U 28 1_555 A A 16 1_555 0.495 -1.289 3.128 -1.618 8.507 31.403 -3.641 -1.138 2.669 15.355 2.920 32.546 10 AA_C48U49:A37G38_AA A 48 ? A 38 ? A 49 ? A 37 ? 1 A U 28 1_555 A A 16 1_555 A A 29 1_555 A U 15 1_555 -0.325 -1.216 2.956 0.697 8.029 32.147 -3.296 0.672 2.578 14.222 -1.235 33.116 11 AA_U49A50:U36A37_AA A 49 ? A 37 ? A 50 ? A 36 ? 1 A A 29 1_555 A U 15 1_555 A C 30 1_555 A G 14 1_555 0.065 -1.387 3.168 -0.207 5.095 33.899 -3.104 -0.141 2.935 8.677 0.352 34.269 12 AA_A50C51:G35U36_AA A 50 ? A 36 ? A 51 ? A 35 ? 1 A C 30 1_555 A G 14 1_555 A U 31 1_555 A G 13 1_555 0.755 -1.384 3.536 7.040 9.161 43.098 -2.718 -0.310 3.269 12.211 -9.383 44.548 13 AA_C51U52:G34G35_AA A 51 ? A 35 ? A 52 ? A 34 ? 1 A U 31 1_555 A G 13 1_555 A G 32 1_555 A C 39 1_555 2.827 -1.981 2.689 -4.409 7.340 45.526 -2.981 -3.873 2.095 9.387 5.638 46.282 14 AA_U52G53:C60G34_AA A 52 ? A 34 ? A 53 ? A 60 ? 1 A G 32 1_555 A C 39 1_555 A C 10 1_555 A G 38 1_555 -1.882 -0.771 3.153 -1.321 6.260 57.961 -1.107 1.866 3.101 6.438 1.359 58.282 15 AA_G53C31:G59C60_AA A 53 ? A 60 ? A 31 ? A 59 ? 1 A G 24 1_555 A C 48 1_555 A G 25 1_555 A C 47 1_555 0.038 -2.025 3.247 -0.128 6.802 30.033 -5.047 -0.094 2.733 12.918 0.243 30.777 16 AA_G45G46:C68C69_AA A 45 ? A 69 ? A 46 ? A 68 ? 1 A G 25 1_555 A C 47 1_555 A U 51 1_555 A A 46 1_555 -1.509 -2.423 3.070 3.535 3.296 30.237 -5.158 3.468 2.608 6.268 -6.723 30.612 17 AA_G46U72:A67C68_AA A 46 ? A 68 ? A 72 ? A 67 ? 1 A U 51 1_555 A A 46 1_555 A U 52 1_555 A A 45 1_555 -0.941 -0.816 3.433 -6.287 5.565 29.716 -2.679 0.476 3.353 10.588 11.961 30.854 18 AA_U72U73:A66A67_AA A 72 ? A 67 ? A 73 ? A 66 ? 1 A U 52 1_555 A A 45 1_555 A U 53 1_555 A A 44 1_555 0.786 -1.290 3.029 -1.880 9.186 29.438 -3.962 -1.792 2.470 17.525 3.587 30.864 19 AA_U73U74:A65A66_AA A 73 ? A 66 ? A 74 ? A 65 ? 1 A U 53 1_555 A A 44 1_555 A G 54 1_555 A C 43 1_555 -0.240 -1.709 3.401 -0.005 9.381 30.583 -4.745 0.436 2.769 17.281 0.009 31.956 20 AA_U74G75:C64A65_AA A 74 ? A 65 ? A 75 ? A 64 ? 1 A G 54 1_555 A C 43 1_555 A G 55 1_555 A U 42 1_555 -0.149 -2.387 3.282 -0.834 6.799 23.402 -7.576 0.118 2.502 16.319 2.002 24.370 21 AA_G75G76:U63C64_AA A 75 ? A 64 ? A 76 ? A 63 ? 1 A G 55 1_555 A U 42 1_555 A A 56 1_555 A U 41 1_555 -0.086 -1.295 3.032 -1.899 2.414 37.011 -2.328 -0.097 2.945 3.795 2.986 37.134 22 AA_G76A77:U62U63_AA A 76 ? A 63 ? A 77 ? A 62 ? 1 A A 56 1_555 A U 41 1_555 A G 57 1_555 A C 40 1_555 1.236 -2.158 3.594 5.545 10.605 26.987 -6.543 -1.227 2.762 21.436 -11.209 29.476 23 AA_A77G78:C61U62_AA A 77 ? A 62 ? A 78 ? A 61 ? 1 B G 1 1_555 B CCC 68 1_555 B G 2 1_555 B U 67 1_555 0.127 -2.026 2.885 -3.645 12.936 22.115 -7.116 -1.013 1.455 30.382 8.560 25.835 24 BB_G22G23:U88CCC89_BB B 22 ? B 89 ? B 23 ? B 88 ? 1 B G 2 1_555 B U 67 1_555 B C 3 1_555 B G 66 1_555 0.253 -0.998 3.115 2.949 6.200 38.735 -2.171 -0.050 2.938 9.258 -4.404 39.316 25 BB_G23C24:G87U88_BB B 23 ? B 88 ? B 24 ? B 87 ? 1 B C 3 1_555 B G 66 1_555 B C 4 1_555 B G 65 1_555 -0.104 -1.863 3.506 -3.598 9.968 32.666 -4.713 -0.384 2.828 17.167 6.197 34.297 26 BB_C24C25:G86G87_BB B 24 ? B 87 ? B 25 ? B 86 ? 1 B C 4 1_555 B G 65 1_555 B U 5 1_555 B A 64 1_555 -0.590 -1.922 3.028 0.012 10.919 23.894 -6.597 1.302 1.973 24.783 -0.026 26.238 27 BB_C25U26:A85G86_BB B 25 ? B 86 ? B 26 ? B 85 ? 1 B U 5 1_555 B A 64 1_555 B U 6 1_555 B A 63 1_555 0.603 -1.031 3.188 2.487 7.518 33.268 -2.882 -0.653 2.928 12.905 -4.269 34.172 28 BB_U26U27:A84A85_BB B 26 ? B 85 ? B 27 ? B 84 ? 1 B U 6 1_555 B A 63 1_555 B A 7 1_555 B U 62 1_555 0.020 -1.011 3.492 -1.831 15.951 34.841 -3.563 -0.262 2.781 25.060 2.877 38.258 29 BB_U27A28:U83A84_BB B 27 ? B 84 ? B 28 ? B 83 ? 1 B A 7 1_555 B U 62 1_555 B U 8 1_555 B A 61 1_555 -0.197 -1.120 3.140 0.051 5.361 35.609 -2.526 0.325 2.946 8.705 -0.083 35.997 30 BB_A28U29:A82U83_BB B 28 ? B 83 ? B 29 ? B 82 ? 1 B U 8 1_555 B A 61 1_555 B A 9 1_555 B U 60 1_555 -0.019 -1.352 2.895 3.511 13.245 25.524 -5.026 0.652 1.950 27.590 -7.313 28.916 31 BB_U29A30:U81A82_BB B 29 ? B 82 ? B 30 ? B 81 ? 1 B G 26 1_555 B C 18 1_555 B C 27 1_555 B G 17 1_555 -0.345 -1.542 2.973 0.100 4.104 34.917 -3.094 0.584 2.779 6.811 -0.165 35.150 32 BB_G47C48:G38C39_BB B 47 ? B 39 ? B 48 ? B 38 ? 1 B C 27 1_555 B G 17 1_555 B U 28 1_555 B A 16 1_555 -0.101 -1.442 3.267 -1.981 7.251 30.293 -3.992 -0.170 2.854 13.613 3.719 31.190 33 BB_C48U49:A37G38_BB B 48 ? B 38 ? B 49 ? B 37 ? 1 B U 28 1_555 B A 16 1_555 B A 29 1_555 B U 15 1_555 0.067 -1.311 3.007 -0.893 12.452 29.987 -4.195 -0.252 2.292 22.860 1.639 32.427 34 BB_U49A50:U36A37_BB B 49 ? B 37 ? B 50 ? B 36 ? 1 B A 29 1_555 B U 15 1_555 B C 30 1_555 B G 14 1_555 0.107 -1.281 3.086 0.573 4.437 35.743 -2.653 -0.099 2.913 7.194 -0.929 36.013 35 BB_A50C51:G35U36_BB B 50 ? B 36 ? B 51 ? B 35 ? 1 B C 30 1_555 B G 14 1_555 B U 31 1_555 B G 13 1_555 0.349 -1.065 3.496 7.835 8.599 43.958 -2.179 0.276 3.257 11.255 -10.255 45.397 36 BB_C51U52:G34G35_BB B 51 ? B 35 ? B 52 ? B 34 ? 1 B U 31 1_555 B G 13 1_555 B G 32 1_555 B C 39 1_555 2.936 -1.872 2.734 -6.636 6.636 48.901 -2.587 -3.852 2.089 7.931 7.931 49.739 37 BB_U52G53:C60G34_BB B 52 ? B 34 ? B 53 ? B 60 ? 1 B G 32 1_555 B C 39 1_555 B C 10 1_555 B G 38 1_555 -2.199 -0.616 3.002 -0.896 5.404 57.819 -0.897 2.222 2.970 5.575 0.924 58.056 38 BB_G53C31:G59C60_BB B 53 ? B 60 ? B 31 ? B 59 ? 1 B G 24 1_555 B C 48 1_555 B G 25 1_555 B C 47 1_555 0.028 -2.093 3.523 4.955 14.335 29.440 -5.961 0.739 2.264 26.136 -9.034 33.041 39 BB_G45G46:C68C69_BB B 45 ? B 69 ? B 46 ? B 68 ? 1 B G 25 1_555 B C 47 1_555 B U 51 1_555 B A 46 1_555 -1.160 -2.668 2.767 -3.199 1.648 25.887 -6.279 1.833 2.716 3.655 7.098 26.131 40 BB_G46U72:A67C68_BB B 46 ? B 68 ? B 72 ? B 67 ? 1 B U 51 1_555 B A 46 1_555 B U 52 1_555 B A 45 1_555 -1.007 -0.846 3.201 -4.436 2.096 32.635 -1.842 1.026 3.246 3.704 7.839 32.992 41 BB_U72U73:A66A67_BB B 72 ? B 67 ? B 73 ? B 66 ? 1 B U 52 1_555 B A 45 1_555 B U 53 1_555 B A 44 1_555 0.678 -1.507 3.413 -0.254 7.981 32.888 -3.867 -1.206 2.971 13.843 0.441 33.817 42 BB_U73U74:A65A66_BB B 73 ? B 66 ? B 74 ? B 65 ? 1 B U 53 1_555 B A 44 1_555 B G 54 1_555 B C 43 1_555 -0.452 -2.188 3.721 -3.517 13.707 25.872 -7.205 0.146 2.330 28.096 7.208 29.431 43 BB_U74G75:C64A65_BB B 74 ? B 65 ? B 75 ? B 64 ? 1 B G 54 1_555 B C 43 1_555 B G 55 1_555 B U 42 1_555 0.094 -2.007 3.099 -1.371 5.813 25.179 -5.902 -0.544 2.569 13.101 3.089 25.866 44 BB_G75G76:U63C64_BB B 75 ? B 64 ? B 76 ? B 63 ? 1 B G 55 1_555 B U 42 1_555 B A 56 1_555 B U 41 1_555 0.264 -1.490 3.431 -0.653 9.436 38.693 -3.281 -0.464 2.996 13.989 0.967 39.790 45 BB_G76A77:U62U63_BB B 76 ? B 63 ? B 77 ? B 62 ? 1 B A 56 1_555 B U 41 1_555 B G 57 1_555 B C 40 1_555 1.091 -1.828 3.443 3.351 8.140 34.747 -4.150 -1.289 3.040 13.366 -5.502 35.812 46 BB_A77G78:C61U62_BB B 77 ? B 62 ? B 78 ? B 61 ? # _atom_sites.entry_id 3SKI _atom_sites.fract_transf_matrix[1][1] 0.028629 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020923 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004381 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_