HEADER SIGNALING PROTEIN 30-JUN-11 3SOE TITLE CRYSTAL STRUCTURE OF THE 3RD PDZ DOMAIN OF THE HUMAN MEMBRANE- TITLE 2 ASSOCIATED GUANYLATE KINASE, WW AND PDZ DOMAIN-CONTAINING PROTEIN 3 TITLE 3 (MAGI3) COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEMBRANE-ASSOCIATED GUANYLATE KINASE, WW AND PDZ DOMAIN- COMPND 3 CONTAINING PROTEIN 3; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: UNP RESIDUES 601-691; COMPND 6 SYNONYM: MEMBRANE-ASSOCIATED GUANYLATE KINASE INVERTED 3, MAGI-3; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KIAA1634, MAGI3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ER2566; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETM-11 KEYWDS STRUCTURAL GENOMICS CONSORTIUM, SGC, PDZ DOMAIN, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.IVARSSON,P.FILIPPAKOPOULOS,S.PICAUD,M.VOLLMAR,F.VON DELFT, AUTHOR 2 C.H.ARROWSMITH,J.WEIGELT,A.EDWARDS,C.BOUNTRA,S.KNAPP,P.ZIMMERMANN, AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 2 13-SEP-23 3SOE 1 REMARK SEQADV REVDAT 1 27-JUL-11 3SOE 0 JRNL AUTH Y.IVARSSON,P.FILIPPAKOPOULOS,S.PICAUD,M.VOLLMAR,F.VON DELFT, JRNL AUTH 2 C.H.ARROWSMITH,J.WEIGELT,A.EDWARDS,C.BOUNTRA,S.KNAPP, JRNL AUTH 3 P.ZIMMERMANN JRNL TITL CRYSTAL STRUCTURE OF THE 3RD PDZ DOMAIN OF THE HUMAN JRNL TITL 2 MEMBRANE-ASSOCIATED GUANYLATE KINASE, WW AND PDZ JRNL TITL 3 DOMAIN-CONTAINING PROTEIN 3 (MAGI3) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 18095 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 924 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1157 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.26 REMARK 3 BIN R VALUE (WORKING SET) : 0.5880 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.6980 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 765 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 157 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 1.14000 REMARK 3 B33 (A**2) : -1.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.084 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.046 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.503 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; 0.015 ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; 0.001 ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; 1.403 ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; 0.887 ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; 5.469 ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ;37.489 ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ;12.033 ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ;20.595 ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; 0.092 ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; 0.006 ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; 0.001 ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; 1.576 ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; 0.449 ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; 2.740 ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; 4.211 ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; 6.467 ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 589 A 608 REMARK 3 ORIGIN FOR THE GROUP (A): 10.4119 5.9468 15.1616 REMARK 3 T TENSOR REMARK 3 T11: 0.0655 T22: 0.1012 REMARK 3 T33: 0.0317 T12: 0.0201 REMARK 3 T13: 0.0139 T23: -0.0176 REMARK 3 L TENSOR REMARK 3 L11: 0.0522 L22: 0.5589 REMARK 3 L33: 2.4034 L12: -0.0289 REMARK 3 L13: 0.2878 L23: 0.4793 REMARK 3 S TENSOR REMARK 3 S11: 0.0271 S12: 0.0060 S13: 0.0244 REMARK 3 S21: -0.0723 S22: -0.0546 S23: -0.0931 REMARK 3 S31: 0.0324 S32: 0.0311 S33: 0.0275 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 609 A 676 REMARK 3 ORIGIN FOR THE GROUP (A): 3.9090 4.7323 28.5638 REMARK 3 T TENSOR REMARK 3 T11: 0.0455 T22: 0.0730 REMARK 3 T33: 0.0284 T12: -0.0016 REMARK 3 T13: -0.0108 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 0.9016 L22: 0.9678 REMARK 3 L33: 0.4252 L12: 0.0909 REMARK 3 L13: 0.0214 L23: 0.1418 REMARK 3 S TENSOR REMARK 3 S11: 0.0279 S12: 0.0319 S13: -0.0242 REMARK 3 S21: 0.0146 S22: -0.0595 S23: 0.0250 REMARK 3 S31: 0.0514 S32: -0.0082 S33: 0.0316 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 677 A 701 REMARK 3 ORIGIN FOR THE GROUP (A): -0.3119 3.7205 20.1473 REMARK 3 T TENSOR REMARK 3 T11: 0.1015 T22: 0.0675 REMARK 3 T33: 0.0589 T12: -0.0060 REMARK 3 T13: -0.0143 T23: -0.0557 REMARK 3 L TENSOR REMARK 3 L11: 1.3867 L22: 0.2688 REMARK 3 L33: 3.0986 L12: -0.4923 REMARK 3 L13: -1.1299 L23: 0.8391 REMARK 3 S TENSOR REMARK 3 S11: -0.0837 S12: 0.1188 S13: -0.1855 REMARK 3 S21: 0.0325 S22: -0.0646 S23: 0.0810 REMARK 3 S31: 0.1555 S32: -0.0931 S33: 0.1484 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 3SOE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000066451. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.52 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.16 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18132 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 22.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : 0.04600 REMARK 200 FOR THE DATA SET : 17.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.51500 REMARK 200 R SYM FOR SHELL (I) : 0.51500 REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: ENSEMBLE OF 3BPU, 2R4H, 2Q9V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PH 6.0 0.25M LI2SO4 35% REMARK 280 PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.31500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.67500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.64000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 32.67500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.31500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.64000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 684 REMARK 465 PRO A 685 REMARK 465 THR A 686 REMARK 465 LYS A 687 REMARK 465 THR A 688 REMARK 465 ALA A 689 REMARK 465 LYS A 690 REMARK 465 MET A 691 REMARK 465 GLY A 692 REMARK 465 SER A 693 REMARK 465 GLY A 694 REMARK 465 SER A 695 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 665 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 105 O HOH A 189 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 635 52.79 -143.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1 DBREF 3SOE A 601 691 UNP Q5TCQ9 MAGI3_HUMAN 601 691 SEQADV 3SOE GLY A 589 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE ALA A 590 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE MET A 591 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE ALA A 592 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE THR A 593 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE LEU A 594 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE TYR A 595 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE LYS A 596 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE LYS A 597 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE ALA A 598 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE GLY A 599 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE LEU A 600 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE GLY A 692 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE SER A 693 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE GLY A 694 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE SER A 695 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE GLY A 696 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE GLN A 697 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE ILE A 698 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE THR A 699 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE LYS A 700 UNP Q5TCQ9 EXPRESSION TAG SEQADV 3SOE VAL A 701 UNP Q5TCQ9 EXPRESSION TAG SEQRES 1 A 113 GLY ALA MET ALA THR LEU TYR LYS LYS ALA GLY LEU LEU SEQRES 2 A 113 VAL THR ILE PRO LEU ILE LYS GLY PRO LYS GLY PHE GLY SEQRES 3 A 113 PHE ALA ILE ALA ASP SER PRO THR GLY GLN LYS VAL LYS SEQRES 4 A 113 MET ILE LEU ASP SER GLN TRP CYS GLN GLY LEU GLN LYS SEQRES 5 A 113 GLY ASP ILE ILE LYS GLU ILE TYR HIS GLN ASN VAL GLN SEQRES 6 A 113 ASN LEU THR HIS LEU GLN VAL VAL GLU VAL LEU LYS GLN SEQRES 7 A 113 PHE PRO VAL GLY ALA ASP VAL PRO LEU LEU ILE LEU ARG SEQRES 8 A 113 GLY GLY PRO PRO SER PRO THR LYS THR ALA LYS MET GLY SEQRES 9 A 113 SER GLY SER GLY GLN ILE THR LYS VAL HET EDO A 1 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO C2 H6 O2 FORMUL 3 HOH *157(H2 O) HELIX 1 1 GLY A 589 GLY A 599 1 11 HELIX 2 2 ASP A 631 CYS A 635 5 5 HELIX 3 3 THR A 656 PHE A 667 1 12 SHEET 1 A 4 LEU A 600 ILE A 607 0 SHEET 2 A 4 ASP A 672 ARG A 679 -1 O LEU A 675 N ILE A 604 SHEET 3 A 4 ILE A 643 ILE A 647 -1 N LYS A 645 O LEU A 676 SHEET 4 A 4 GLN A 650 ASN A 651 -1 O GLN A 650 N ILE A 647 SHEET 1 B 3 GLY A 623 ILE A 629 0 SHEET 2 B 3 PHE A 615 SER A 620 -1 N ALA A 618 O LYS A 625 SHEET 3 B 3 ILE A 698 VAL A 701 -1 O VAL A 701 N PHE A 615 SITE 1 AC1 6 HOH A 150 HOH A 156 HOH A 157 GLY A 599 SITE 2 AC1 6 GLN A 666 PRO A 668 CRYST1 34.630 59.280 65.350 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028877 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016869 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015302 0.00000