HEADER HYDROLASE/INHIBITOR 11-JUL-11 3SU5 TITLE CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT D168A IN COMPLEX WITH TITLE 2 VANIPREVIR COMPND MOL_ID: 1; COMPND 2 MOLECULE: NS3 PROTEASE, NS4A PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NS4A (UNP RESIDUES 1674-1688), NS3 (UNP RESIDUES 1027- COMPND 5 1208); COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HEPATITIS C VIRUS; SOURCE 3 ORGANISM_TAXID: 31646; SOURCE 4 STRAIN: SUBTYPE 1A, BID-V318; SOURCE 5 GENE: NS3-NS4A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS DRUG RESISTANCE, DRUG DESIGN, PROTEASE INHIBITORS, SERINE PROTEASE, KEYWDS 2 VIRAL PROTEIN, HYDROLASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.A.SCHIFFER,K.P.ROMANO REVDAT 4 28-FEB-24 3SU5 1 REMARK SEQADV HETSYN LINK REVDAT 3 08-NOV-17 3SU5 1 REMARK REVDAT 2 23-AUG-17 3SU5 1 SOURCE REMARK REVDAT 1 05-SEP-12 3SU5 0 JRNL AUTH K.P.ROMANO,A.ALI,C.AYDIN,D.SOUMANA,A.OZEN,L.M.DEVEAU, JRNL AUTH 2 C.SILVER,H.CAO,A.NEWTON,C.J.PETROPOULOS,W.HUANG,C.A.SCHIFFER JRNL TITL THE MOLECULAR BASIS OF DRUG RESISTANCE AGAINST HEPATITIS C JRNL TITL 2 VIRUS NS3/4A PROTEASE INHIBITORS. JRNL REF PLOS PATHOG. V. 8 02832 2012 JRNL REFN ISSN 1553-7366 JRNL PMID 22910833 JRNL DOI 10.1371/JOURNAL.PPAT.1002832 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.01 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 27380 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1386 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1733 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.44 REMARK 3 BIN R VALUE (WORKING SET) : 0.2240 REMARK 3 BIN FREE R VALUE SET COUNT : 111 REMARK 3 BIN FREE R VALUE : 0.2590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1439 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 74 REMARK 3 SOLVENT ATOMS : 180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.95000 REMARK 3 B22 (A**2) : -0.63000 REMARK 3 B33 (A**2) : -1.32000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.076 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.048 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.664 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.966 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1576 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1020 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2169 ; 1.391 ; 2.005 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2449 ; 0.822 ; 3.006 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 209 ; 6.229 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 50 ;32.345 ;22.400 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 228 ;10.831 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;15.140 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 254 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1748 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 302 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1014 ; 0.521 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 419 ; 0.138 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1631 ; 0.929 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 562 ; 1.555 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 527 ; 2.389 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 981 A 988 REMARK 3 ORIGIN FOR THE GROUP (A): 7.4131 -21.7425 -3.1669 REMARK 3 T TENSOR REMARK 3 T11: 0.1695 T22: 0.1122 REMARK 3 T33: 0.0980 T12: -0.0114 REMARK 3 T13: 0.0576 T23: 0.0405 REMARK 3 L TENSOR REMARK 3 L11: 6.9069 L22: 6.5745 REMARK 3 L33: 24.2885 L12: -1.1273 REMARK 3 L13: -1.0424 L23: 13.2783 REMARK 3 S TENSOR REMARK 3 S11: 0.2827 S12: -0.1433 S13: -0.2946 REMARK 3 S21: -0.2620 S22: -0.4154 S23: 0.2613 REMARK 3 S31: -0.3396 S32: -0.6426 S33: 0.1326 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 989 A 997 REMARK 3 ORIGIN FOR THE GROUP (A): 4.9139 -6.0203 14.6801 REMARK 3 T TENSOR REMARK 3 T11: 0.0477 T22: 0.0886 REMARK 3 T33: 0.0878 T12: -0.0004 REMARK 3 T13: 0.0097 T23: -0.0064 REMARK 3 L TENSOR REMARK 3 L11: 0.9835 L22: 5.3403 REMARK 3 L33: 2.2850 L12: 0.1272 REMARK 3 L13: -1.3181 L23: 1.5891 REMARK 3 S TENSOR REMARK 3 S11: -0.0574 S12: 0.0146 S13: 0.0051 REMARK 3 S21: -0.1899 S22: 0.1285 S23: -0.1344 REMARK 3 S31: -0.0683 S32: 0.1337 S33: -0.0711 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 998 A 1010 REMARK 3 ORIGIN FOR THE GROUP (A): 0.8416 6.5694 25.4691 REMARK 3 T TENSOR REMARK 3 T11: 0.1230 T22: 0.0828 REMARK 3 T33: 0.0749 T12: 0.0064 REMARK 3 T13: -0.0069 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 3.4408 L22: 1.3265 REMARK 3 L33: 4.0699 L12: 0.6853 REMARK 3 L13: -3.3817 L23: 0.0923 REMARK 3 S TENSOR REMARK 3 S11: 0.1016 S12: -0.3163 S13: 0.1352 REMARK 3 S21: 0.2429 S22: -0.0221 S23: -0.0111 REMARK 3 S31: -0.1751 S32: 0.2913 S33: -0.0795 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1011 A 1017 REMARK 3 ORIGIN FOR THE GROUP (A): 8.6834 -0.4293 9.3773 REMARK 3 T TENSOR REMARK 3 T11: 0.2561 T22: 0.0515 REMARK 3 T33: 0.0548 T12: 0.0002 REMARK 3 T13: 0.0836 T23: -0.0178 REMARK 3 L TENSOR REMARK 3 L11: 3.3037 L22: 18.8153 REMARK 3 L33: 1.4735 L12: -1.7876 REMARK 3 L13: -3.4611 L23: 3.3329 REMARK 3 S TENSOR REMARK 3 S11: -0.3172 S12: -0.0685 S13: 0.0270 REMARK 3 S21: -1.1958 S22: 0.2613 S23: -0.5660 REMARK 3 S31: 0.0644 S32: -0.0243 S33: 0.0560 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1018 A 1027 REMARK 3 ORIGIN FOR THE GROUP (A): 12.6264 -6.6483 12.3890 REMARK 3 T TENSOR REMARK 3 T11: 0.0564 T22: 0.0605 REMARK 3 T33: 0.1215 T12: -0.0057 REMARK 3 T13: 0.0873 T23: -0.0206 REMARK 3 L TENSOR REMARK 3 L11: 1.5487 L22: 7.6943 REMARK 3 L33: 11.2562 L12: 1.4593 REMARK 3 L13: 2.8894 L23: 3.0648 REMARK 3 S TENSOR REMARK 3 S11: -0.1297 S12: -0.0270 S13: 0.0530 REMARK 3 S21: -0.4755 S22: 0.0604 S23: -0.5477 REMARK 3 S31: -0.2247 S32: 0.1639 S33: 0.0692 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1028 A 1033 REMARK 3 ORIGIN FOR THE GROUP (A): 5.6921 -1.4922 26.1727 REMARK 3 T TENSOR REMARK 3 T11: 0.0702 T22: 0.0412 REMARK 3 T33: 0.0723 T12: -0.0219 REMARK 3 T13: -0.0236 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 19.3556 L22: 3.5295 REMARK 3 L33: 6.9959 L12: 1.9079 REMARK 3 L13: -5.9318 L23: 0.3328 REMARK 3 S TENSOR REMARK 3 S11: -0.0196 S12: -0.5196 S13: 0.3301 REMARK 3 S21: 0.1698 S22: 0.0104 S23: -0.1602 REMARK 3 S31: -0.2043 S32: 0.2932 S33: 0.0093 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1034 A 1042 REMARK 3 ORIGIN FOR THE GROUP (A): -0.3061 -4.7870 12.7490 REMARK 3 T TENSOR REMARK 3 T11: 0.0486 T22: 0.0849 REMARK 3 T33: 0.0707 T12: 0.0114 REMARK 3 T13: 0.0013 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 2.4358 L22: 2.0304 REMARK 3 L33: 4.8870 L12: 0.7486 REMARK 3 L13: 1.1036 L23: -0.1300 REMARK 3 S TENSOR REMARK 3 S11: 0.0788 S12: 0.1854 S13: -0.0498 REMARK 3 S21: -0.1256 S22: 0.0615 S23: -0.0638 REMARK 3 S31: 0.1748 S32: -0.0633 S33: -0.1403 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1043 A 1060 REMARK 3 ORIGIN FOR THE GROUP (A): -2.1419 -11.2464 21.5511 REMARK 3 T TENSOR REMARK 3 T11: 0.0537 T22: 0.0686 REMARK 3 T33: 0.0692 T12: 0.0068 REMARK 3 T13: 0.0048 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 0.9552 L22: 1.2327 REMARK 3 L33: 0.3509 L12: -0.0497 REMARK 3 L13: 0.2618 L23: 0.2045 REMARK 3 S TENSOR REMARK 3 S11: -0.0038 S12: 0.0073 S13: -0.0164 REMARK 3 S21: 0.0413 S22: -0.0041 S23: -0.0448 REMARK 3 S31: 0.0002 S32: 0.0156 S33: 0.0079 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1061 A 1066 REMARK 3 ORIGIN FOR THE GROUP (A): 5.7889 -13.7589 14.3525 REMARK 3 T TENSOR REMARK 3 T11: 0.0575 T22: 0.0766 REMARK 3 T33: 0.0948 T12: 0.0208 REMARK 3 T13: 0.0059 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 1.3655 L22: 5.3141 REMARK 3 L33: 0.9146 L12: 1.9616 REMARK 3 L13: -0.4559 L23: 1.5067 REMARK 3 S TENSOR REMARK 3 S11: 0.0477 S12: -0.0322 S13: -0.0177 REMARK 3 S21: 0.0112 S22: -0.0164 S23: -0.0812 REMARK 3 S31: 0.0232 S32: 0.0140 S33: -0.0314 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1067 A 1087 REMARK 3 ORIGIN FOR THE GROUP (A): 1.5620 -17.1809 20.1929 REMARK 3 T TENSOR REMARK 3 T11: 0.0622 T22: 0.0703 REMARK 3 T33: 0.0797 T12: 0.0126 REMARK 3 T13: -0.0038 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.1498 L22: 1.0276 REMARK 3 L33: 0.7311 L12: 0.1164 REMARK 3 L13: -0.0420 L23: -0.0582 REMARK 3 S TENSOR REMARK 3 S11: 0.0237 S12: -0.0351 S13: -0.0444 REMARK 3 S21: 0.0389 S22: -0.0278 S23: -0.0686 REMARK 3 S31: 0.0422 S32: 0.0527 S33: 0.0041 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1088 A 1100 REMARK 3 ORIGIN FOR THE GROUP (A): -0.1198 -8.1545 33.5571 REMARK 3 T TENSOR REMARK 3 T11: 0.0588 T22: 0.1070 REMARK 3 T33: 0.0532 T12: 0.0154 REMARK 3 T13: -0.0187 T23: 0.0114 REMARK 3 L TENSOR REMARK 3 L11: 11.6341 L22: 1.2644 REMARK 3 L33: 5.6966 L12: 1.3186 REMARK 3 L13: -7.5218 L23: -0.3969 REMARK 3 S TENSOR REMARK 3 S11: -0.1054 S12: -0.5833 S13: -0.1473 REMARK 3 S21: 0.0378 S22: -0.1027 S23: -0.0838 REMARK 3 S31: 0.0037 S32: 0.2892 S33: 0.2081 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1101 A 1114 REMARK 3 ORIGIN FOR THE GROUP (A): -11.3512 0.9092 26.8699 REMARK 3 T TENSOR REMARK 3 T11: 0.0554 T22: 0.0710 REMARK 3 T33: 0.0965 T12: 0.0033 REMARK 3 T13: 0.0233 T23: -0.0137 REMARK 3 L TENSOR REMARK 3 L11: 3.7182 L22: 0.9281 REMARK 3 L33: 6.5717 L12: 1.9381 REMARK 3 L13: -3.8233 L23: -2.4089 REMARK 3 S TENSOR REMARK 3 S11: 0.1001 S12: -0.0835 S13: 0.2402 REMARK 3 S21: 0.0404 S22: -0.0023 S23: 0.1036 REMARK 3 S31: -0.1290 S32: 0.0421 S33: -0.0978 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1115 A 1125 REMARK 3 ORIGIN FOR THE GROUP (A): -20.0357 -7.1185 29.4258 REMARK 3 T TENSOR REMARK 3 T11: 0.0495 T22: 0.0903 REMARK 3 T33: 0.0831 T12: -0.0050 REMARK 3 T13: 0.0138 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 1.7797 L22: 1.2119 REMARK 3 L33: 1.9016 L12: 0.1949 REMARK 3 L13: -1.2064 L23: -0.7107 REMARK 3 S TENSOR REMARK 3 S11: 0.0308 S12: -0.0176 S13: -0.0042 REMARK 3 S21: -0.0193 S22: 0.0428 S23: 0.0302 REMARK 3 S31: 0.0266 S32: -0.0463 S33: -0.0736 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1126 A 1130 REMARK 3 ORIGIN FOR THE GROUP (A): -20.7239 3.2294 23.4736 REMARK 3 T TENSOR REMARK 3 T11: 0.1386 T22: 0.1506 REMARK 3 T33: 0.3435 T12: -0.0344 REMARK 3 T13: -0.0045 T23: 0.1241 REMARK 3 L TENSOR REMARK 3 L11: 1.6661 L22: 0.2706 REMARK 3 L33: 40.7887 L12: 1.6896 REMARK 3 L13: 7.1908 L23: 1.6258 REMARK 3 S TENSOR REMARK 3 S11: -0.3453 S12: 0.0355 S13: 0.3711 REMARK 3 S21: 0.2235 S22: -0.3470 S23: -0.2589 REMARK 3 S31: -0.9339 S32: 0.9856 S33: 0.6923 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1131 A 1142 REMARK 3 ORIGIN FOR THE GROUP (A): -12.5385 0.3689 17.3476 REMARK 3 T TENSOR REMARK 3 T11: 0.0828 T22: 0.0947 REMARK 3 T33: 0.0983 T12: 0.0179 REMARK 3 T13: 0.0129 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 1.0323 L22: 1.6719 REMARK 3 L33: 1.8827 L12: -0.4961 REMARK 3 L13: -0.3458 L23: -1.9926 REMARK 3 S TENSOR REMARK 3 S11: 0.0931 S12: 0.0177 S13: 0.0942 REMARK 3 S21: 0.0915 S22: 0.1153 S23: 0.0705 REMARK 3 S31: -0.1314 S32: -0.1538 S33: -0.2084 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1143 A 1149 REMARK 3 ORIGIN FOR THE GROUP (A): -8.9564 -3.3755 35.0036 REMARK 3 T TENSOR REMARK 3 T11: 0.0790 T22: 0.1123 REMARK 3 T33: 0.1111 T12: -0.0229 REMARK 3 T13: 0.0625 T23: -0.0528 REMARK 3 L TENSOR REMARK 3 L11: 2.7948 L22: 2.8473 REMARK 3 L33: 9.9175 L12: -1.2164 REMARK 3 L13: -5.1919 L23: 3.2070 REMARK 3 S TENSOR REMARK 3 S11: 0.1715 S12: -0.2075 S13: 0.2632 REMARK 3 S21: 0.0329 S22: -0.0012 S23: -0.0657 REMARK 3 S31: -0.0186 S32: 0.2163 S33: -0.1703 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1150 A 1158 REMARK 3 ORIGIN FOR THE GROUP (A): -12.8053 -8.7593 23.5214 REMARK 3 T TENSOR REMARK 3 T11: 0.0581 T22: 0.0741 REMARK 3 T33: 0.0734 T12: -0.0153 REMARK 3 T13: 0.0056 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 1.1675 L22: 0.2192 REMARK 3 L33: 2.0180 L12: -0.4808 REMARK 3 L13: -0.2134 L23: 0.6272 REMARK 3 S TENSOR REMARK 3 S11: 0.0181 S12: -0.0490 S13: -0.0188 REMARK 3 S21: 0.0111 S22: -0.0344 S23: 0.0446 REMARK 3 S31: 0.0219 S32: -0.0340 S33: 0.0163 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1159 A 1165 REMARK 3 ORIGIN FOR THE GROUP (A): -24.2234 -1.8192 15.7723 REMARK 3 T TENSOR REMARK 3 T11: 0.0407 T22: 0.2155 REMARK 3 T33: 0.1860 T12: 0.0743 REMARK 3 T13: 0.0054 T23: 0.1184 REMARK 3 L TENSOR REMARK 3 L11: 7.1495 L22: 3.5501 REMARK 3 L33: 24.1280 L12: 6.9286 REMARK 3 L13: -4.2381 L23: -5.3057 REMARK 3 S TENSOR REMARK 3 S11: 0.0612 S12: 0.6127 S13: 0.5518 REMARK 3 S21: 0.1709 S22: 0.6519 S23: 0.5798 REMARK 3 S31: -0.2608 S32: -1.5557 S33: -0.7131 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1166 A 1174 REMARK 3 ORIGIN FOR THE GROUP (A): -13.0570 -12.2048 27.3734 REMARK 3 T TENSOR REMARK 3 T11: 0.0637 T22: 0.0737 REMARK 3 T33: 0.0696 T12: -0.0104 REMARK 3 T13: 0.0088 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 4.6321 L22: 2.8780 REMARK 3 L33: 4.4393 L12: -3.0663 REMARK 3 L13: 3.2633 L23: -2.5436 REMARK 3 S TENSOR REMARK 3 S11: 0.0027 S12: -0.1416 S13: -0.1430 REMARK 3 S21: 0.1114 S22: 0.1281 S23: 0.0886 REMARK 3 S31: 0.0379 S32: -0.0792 S33: -0.1307 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1175 A 1181 REMARK 3 ORIGIN FOR THE GROUP (A): -4.3145 -21.1178 30.8838 REMARK 3 T TENSOR REMARK 3 T11: 0.1971 T22: 0.0951 REMARK 3 T33: 0.2230 T12: 0.0682 REMARK 3 T13: 0.1447 T23: 0.1415 REMARK 3 L TENSOR REMARK 3 L11: 21.1827 L22: 8.6933 REMARK 3 L33: 2.9198 L12: -0.7123 REMARK 3 L13: 2.2224 L23: 6.2590 REMARK 3 S TENSOR REMARK 3 S11: -0.4104 S12: -1.0706 S13: -0.9830 REMARK 3 S21: 0.7003 S22: 0.2057 S23: 0.1617 REMARK 3 S31: 0.4908 S32: 0.0110 S33: 0.2047 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 3SU5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000066654. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27508 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.50600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-25% PEG 3350, 0.1M MES (PH 6.5), 4% REMARK 280 AMMONIUM SULFATE, HANGING DROP, VAPOR DIFFUSION, TEMPERATURE REMARK 280 295K, PH 6.2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.53300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.00750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.26900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 30.00750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.53300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.26900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 980 REMARK 465 PRO A 1182 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 988 CG CD CE NZ REMARK 470 ASP A1003 CG OD1 OD2 REMARK 470 GLU A1013 CG CD OE1 OE2 REMARK 470 GLU A1014 CG CD OE1 OE2 REMARK 470 GLN A1017 CG CD OE1 NE2 REMARK 470 GLU A1018 CG CD OE1 OE2 REMARK 470 GLN A1021 CG CD OE1 NE2 REMARK 470 ARG A1024 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1068 CG CD CE NZ REMARK 470 ARG A1092 CG CD NE CZ NH1 NH2 REMARK 470 ARG A1161 CG CD NE CZ NH1 NH2 REMARK 470 SER A1181 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A1043 -162.78 -162.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 VANIPREVIR (MK-7009) IS A MACROCYCLIC, PEPTIDOMIMETIC HCV NS3/4A REMARK 600 PROTEASE INHIBITOR FROM MERCK. THE DRUG MIMICS THE PEPTIDE BACKBONE REMARK 600 OF PROTEINS, ALTHOUGH THE DRUG MOIETIES CANNOT BE SEQUENCED USING REMARK 600 AMINO ACID NOMENCLATURE. REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 6 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1097 SG REMARK 620 2 CYS A1099 SG 112.8 REMARK 620 3 CYS A1145 SG 111.2 119.9 REMARK 620 4 HIS A1149 ND1 124.4 95.9 91.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SU3 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SU3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE IN COMPLEX WITH VANIPREVIR REMARK 900 RELATED ID: 3SU4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT R155K IN COMPLEX WITH REMARK 900 VANIPREVIR REMARK 900 RELATED ID: 3SU6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT A156T IN COMPLEX WITH REMARK 900 VANIPREVIR REMARK 900 RELATED ID: 3SUD RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE IN COMPLEX WITH MK-5172 REMARK 900 RELATED ID: 3SUE RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT R155K IN COMPLEX WITH REMARK 900 MK-5172 REMARK 900 RELATED ID: 3SUF RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT D168A IN COMPLEX WITH REMARK 900 MK-5172 REMARK 900 RELATED ID: 3SUG RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT A156T IN COMPLEX WITH REMARK 900 MK-5172 REMARK 900 RELATED ID: 3SV6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE IN COMPLEX WITH TELAPREVIR REMARK 900 RELATED ID: 3SV7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT R155K IN COMPLEX WITH REMARK 900 TELAPREVIR REMARK 900 RELATED ID: 3SV8 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT D168A IN COMPLEX WITH REMARK 900 TELAPREVIR REMARK 900 RELATED ID: 3SV9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF NS3/4A PROTEASE VARIANT A156T IN COMPLEX WITH REMARK 900 TELAPREVIR REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE COFACTOR 4A RESIDUES 990-1000 (GLY SER VAL VAL ILE VAL GLY ARG REMARK 999 ILE ASN LEU) IN THIS ENTRY CORRESPOND TO RESIDUES NUMBERING 1678- REMARK 999 1688 OF DATABASE SEQUENCE REFERENCE (UNP A8DG50). THIS PEPTIDE IS REMARK 999 COVALENTLY LINKED TO THE N-TERMINUS OF NS3. C1679S MUTATION WAS REMARK 999 ENGINEERED TO PREVENT DISULFIDE FORMATION. THE V1686I AND I1687N REMARK 999 WERE ENGINEERED TO OPTIMIZE THE LINKER BETWEEN THE COFACTOR 4A AND REMARK 999 NS3. DBREF 3SU5 A 986 1000 UNP A8DG50 A8DG50_9HEPC 1674 1688 DBREF 3SU5 A 1001 1182 UNP A8DG50 A8DG50_9HEPC 1027 1208 SEQADV 3SU5 GLY A 980 UNP A8DG50 EXPRESSION TAG SEQADV 3SU5 SER A 981 UNP A8DG50 EXPRESSION TAG SEQADV 3SU5 HIS A 982 UNP A8DG50 EXPRESSION TAG SEQADV 3SU5 MET A 983 UNP A8DG50 EXPRESSION TAG SEQADV 3SU5 ALA A 984 UNP A8DG50 EXPRESSION TAG SEQADV 3SU5 SER A 985 UNP A8DG50 EXPRESSION TAG SEQADV 3SU5 MET A 986 UNP A8DG50 CYS 1674 ENGINEERED MUTATION SEQADV 3SU5 LYS A 987 UNP A8DG50 LEU 1675 ENGINEERED MUTATION SEQADV 3SU5 LYS A 988 UNP A8DG50 SER 1676 ENGINEERED MUTATION SEQADV 3SU5 LYS A 989 UNP A8DG50 THR 1677 ENGINEERED MUTATION SEQADV 3SU5 SER A 991 UNP A8DG50 CYS 1679 SEE REMARK 999 SEQADV 3SU5 ILE A 998 UNP A8DG50 VAL 1686 SEE REMARK 999 SEQADV 3SU5 ASN A 999 UNP A8DG50 ILE 1687 SEE REMARK 999 SEQADV 3SU5 SER A 1001 UNP A8DG50 ALA 1027 ENGINEERED MUTATION SEQADV 3SU5 GLY A 1002 UNP A8DG50 PRO 1028 ENGINEERED MUTATION SEQADV 3SU5 ASP A 1003 UNP A8DG50 ILE 1029 ENGINEERED MUTATION SEQADV 3SU5 GLU A 1013 UNP A8DG50 LEU 1039 ENGINEERED MUTATION SEQADV 3SU5 GLU A 1014 UNP A8DG50 LEU 1040 ENGINEERED MUTATION SEQADV 3SU5 GLN A 1017 UNP A8DG50 ILE 1043 ENGINEERED MUTATION SEQADV 3SU5 GLU A 1018 UNP A8DG50 ILE 1044 ENGINEERED MUTATION SEQADV 3SU5 GLN A 1021 UNP A8DG50 LEU 1047 ENGINEERED MUTATION SEQADV 3SU5 THR A 1040 UNP A8DG50 ALA 1066 ENGINEERED MUTATION SEQADV 3SU5 SER A 1047 UNP A8DG50 CYS 1073 ENGINEERED MUTATION SEQADV 3SU5 LEU A 1052 UNP A8DG50 CYS 1078 ENGINEERED MUTATION SEQADV 3SU5 THR A 1072 UNP A8DG50 ILE 1098 ENGINEERED MUTATION SEQADV 3SU5 GLN A 1086 UNP A8DG50 PRO 1112 ENGINEERED MUTATION SEQADV 3SU5 ALA A 1139 UNP A8DG50 SER 1165 ENGINEERED MUTATION SEQADV 3SU5 SER A 1159 UNP A8DG50 CYS 1185 ENGINEERED MUTATION SEQADV 3SU5 ALA A 1168 UNP A8DG50 ASP 1194 ENGINEERED MUTATION SEQRES 1 A 203 GLY SER HIS MET ALA SER MET LYS LYS LYS GLY SER VAL SEQRES 2 A 203 VAL ILE VAL GLY ARG ILE ASN LEU SER GLY ASP THR ALA SEQRES 3 A 203 TYR ALA GLN GLN THR ARG GLY GLU GLU GLY CYS GLN GLU SEQRES 4 A 203 THR SER GLN THR GLY ARG ASP LYS ASN GLN VAL GLU GLY SEQRES 5 A 203 GLU VAL GLN ILE VAL SER THR ALA THR GLN THR PHE LEU SEQRES 6 A 203 ALA THR SER ILE ASN GLY VAL LEU TRP THR VAL TYR HIS SEQRES 7 A 203 GLY ALA GLY THR ARG THR ILE ALA SER PRO LYS GLY PRO SEQRES 8 A 203 VAL THR GLN MET TYR THR ASN VAL ASP LYS ASP LEU VAL SEQRES 9 A 203 GLY TRP GLN ALA PRO GLN GLY SER ARG SER LEU THR PRO SEQRES 10 A 203 CYS THR CYS GLY SER SER ASP LEU TYR LEU VAL THR ARG SEQRES 11 A 203 HIS ALA ASP VAL ILE PRO VAL ARG ARG ARG GLY ASP SER SEQRES 12 A 203 ARG GLY SER LEU LEU SER PRO ARG PRO ILE SER TYR LEU SEQRES 13 A 203 LYS GLY SER ALA GLY GLY PRO LEU LEU CYS PRO ALA GLY SEQRES 14 A 203 HIS ALA VAL GLY ILE PHE ARG ALA ALA VAL SER THR ARG SEQRES 15 A 203 GLY VAL ALA LYS ALA VAL ALA PHE ILE PRO VAL GLU SER SEQRES 16 A 203 LEU GLU THR THR MET ARG SER PRO HET SU3 A 1 53 HET SO4 A 2 5 HET SO4 A 3 5 HET SO4 A 4 5 HET SO4 A 5 5 HET ZN A 6 1 HETNAM SU3 (5R,7S,10S)-10-TERT-BUTYL-N-{(1R,2R)-1- HETNAM 2 SU3 [(CYCLOPROPYLSULFONYL)CARBAMOYL]-2-ETHYLCYCLOPROPYL}- HETNAM 3 SU3 15,15-DIMETHYL-3,9,12-TRIOXO-6,7,9,10,11,12,14,15,16, HETNAM 4 SU3 17,18,19-DODECAHYDRO-1H,5H-2,23:5,8-DIMETHANO-4,13,2, HETNAM 5 SU3 8,11-BENZODIOXATRIAZACYCLOHENICOSINE-7(3H)-CARBOXAMIDE HETNAM SO4 SULFATE ION HETNAM ZN ZINC ION HETSYN SU3 VANIPREVIR; MK-7009 FORMUL 2 SU3 C38 H55 N5 O9 S FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 ZN ZN 2+ FORMUL 8 HOH *180(H2 O) HELIX 1 1 HIS A 982 MET A 986 5 5 HELIX 2 2 GLY A 1012 GLY A 1023 1 12 HELIX 3 3 TYR A 1056 GLY A 1060 1 5 HELIX 4 4 SER A 1133 LEU A 1135 5 3 HELIX 5 5 VAL A 1172 MET A 1179 1 8 SHEET 1 A 7 TYR A1006 GLN A1009 0 SHEET 2 A 7 VAL A 993 ASN A 999 -1 N ASN A 999 O TYR A1006 SHEET 3 A 7 VAL A1033 SER A1037 -1 O ILE A1035 N VAL A 995 SHEET 4 A 7 THR A1042 ILE A1048 -1 O ALA A1045 N GLN A1034 SHEET 5 A 7 VAL A1051 VAL A1055 -1 O TRP A1053 N THR A1046 SHEET 6 A 7 LEU A1082 GLN A1086 -1 O TRP A1085 N LEU A1052 SHEET 7 A 7 TYR A1075 ASN A1077 -1 N ASN A1077 O LEU A1082 SHEET 1 B 7 ASP A1103 VAL A1107 0 SHEET 2 B 7 VAL A1113 ARG A1118 -1 O ILE A1114 N LEU A1106 SHEET 3 B 7 ARG A1123 PRO A1131 -1 O SER A1125 N ARG A1117 SHEET 4 B 7 VAL A1163 PRO A1171 -1 O ALA A1164 N ARG A1130 SHEET 5 B 7 ALA A1150 THR A1160 -1 N ALA A1156 O ALA A1168 SHEET 6 B 7 PRO A1142 LEU A1144 -1 N LEU A1143 O VAL A1151 SHEET 7 B 7 ASP A1103 VAL A1107 -1 N TYR A1105 O LEU A1144 LINK ZN ZN A 6 SG CYS A1097 1555 1555 2.32 LINK ZN ZN A 6 SG CYS A1099 1555 1555 2.32 LINK ZN ZN A 6 SG CYS A1145 1555 1555 2.31 LINK ZN ZN A 6 ND1 HIS A1149 1555 1555 2.44 SITE 1 AC1 20 HOH A 20 HOH A 68 HOH A 166 HOH A 185 SITE 2 AC1 20 GLN A1041 PHE A1043 HIS A1057 GLY A1058 SITE 3 AC1 20 ASP A1079 ASP A1081 ARG A1123 LEU A1135 SITE 4 AC1 20 LYS A1136 GLY A1137 SER A1138 ALA A1139 SITE 5 AC1 20 PHE A1154 ARG A1155 ALA A1156 ALA A1157 SITE 1 AC2 5 HOH A 173 HOH A 181 SER A1122 ARG A1123 SITE 2 AC2 5 ARG A1155 SITE 1 AC3 4 LYS A1080 ARG A1155 PRO A1171 SER A1174 SITE 1 AC4 6 HOH A 49 HOH A 73 HOH A 81 HOH A 184 SITE 2 AC4 6 ARG A1109 HIS A1110 SITE 1 AC5 8 HOH A 13 HOH A 43 HOH A 53 HOH A 95 SITE 2 AC5 8 HOH A 168 TYR A1006 GLN A1008 TYR A1056 SITE 1 AC6 4 CYS A1097 CYS A1099 CYS A1145 HIS A1149 CRYST1 55.066 58.538 60.015 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018160 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017083 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016663 0.00000