HEADER TRANSFERASE 13-JUL-11 3SWG TITLE AQUIFEX AEOLICUS MURA IN COMPLEX WITH UDP-N-ACETYLMURAMIC ACID AND TITLE 2 COVALENT ADDUCT OF PEP WITH CYS124 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-N-ACETYLGLUCOSAMINE 1-CARBOXYVINYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ENOYLPYRUVATE TRANSFERASE, UDP-N-ACETYLGLUCOSAMINE COMPND 5 ENOLPYRUVYL TRANSFERASE, EPT; COMPND 6 EC: 2.5.1.7; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS; SOURCE 3 ORGANISM_TAXID: 224324; SOURCE 4 STRAIN: VF5; SOURCE 5 GENE: MURA, AQ_1281; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-21A KEYWDS MURA, CLOSE ENZYME STATE, CELL WALL, BIOGENESIS/DEGRADATION, KEYWDS 2 PEPTIDOGLYCAN SYNTHESIS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.-Y.ZHU,E.SCHONBRUNN REVDAT 5 06-DEC-23 3SWG 1 REMARK REVDAT 4 13-SEP-23 3SWG 1 REMARK LINK REVDAT 3 02-MAY-12 3SWG 1 JRNL REVDAT 2 25-APR-12 3SWG 1 REMARK REVDAT 1 14-MAR-12 3SWG 0 JRNL AUTH J.Y.ZHU,Y.YANG,H.HAN,S.BETZI,S.H.OLESEN,F.MARSILIO, JRNL AUTH 2 E.SCHONBRUNN JRNL TITL FUNCTIONAL CONSEQUENCE OF COVALENT REACTION OF JRNL TITL 2 PHOSPHOENOLPYRUVATE WITH UDP-N-ACETYLGLUCOSAMINE JRNL TITL 3 1-CARBOXYVINYLTRANSFERASE (MURA). JRNL REF J.BIOL.CHEM. V. 287 12657 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 22378791 JRNL DOI 10.1074/JBC.M112.342725 REMARK 0 REMARK 0 THIS ENTRY 3SWG REFLECTS AN ALTERNATIVE MODELING OF THE ORIGINAL REMARK 0 STRUCTURAL DATA R2YVWSF DETERMINED BY AUTHORS OF THE PDB ENTRY REMARK 0 2YVW: AUTHOR Y.KITAMURA,S.YOKOYAMA,S.KURAMITSU REMARK 0 ORIGINAL DATA REFERENCE 1 REMARK 0 PDB ID: 2YVW REMARK 0 AUTH Y.KITAMURA,S.YOKOYAMA,S.KURAMITSU REMARK 0 TITL CRYSTAL STRUCTURE OF UDP-N-ACETYLGLUCOSAMINE REMARK 0 TITL 2 1-CARBOXYVINYLTRANSFERASE FROM AQUIFEX AEOLICUS VF5 REMARK 0 REF TO BE PUBLISHED REMARK 0 REFN REMARK 2 REMARK 2 RESOLUTION. 1.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.3 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 91849.690 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 50320 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2516 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.81 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.10 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 6344 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE : 0.2390 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 351 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.013 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3270 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 151 REMARK 3 SOLVENT ATOMS : 348 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -9.26000 REMARK 3 B22 (A**2) : -9.26000 REMARK 3 B33 (A**2) : 18.51000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.16 REMARK 3 ESD FROM SIGMAA (A) : 0.19 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.19 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.17 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.890 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.110 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.590 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.140 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.330 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.42 REMARK 3 BSOL : 60.72 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CPA.PAR REMARK 3 PARAMETER FILE 3 : EPU.PAR REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : PG4.PAR REMARK 3 PARAMETER FILE 6 : PGE.PAR REMARK 3 PARAMETER FILE 7 : PEG.PAR REMARK 3 PARAMETER FILE 8 : EDO.PAR REMARK 3 PARAMETER FILE 9 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CPA.TOP REMARK 3 TOPOLOGY FILE 3 : EPU.TOP REMARK 3 TOPOLOGY FILE 4 : WATER.TOP REMARK 3 TOPOLOGY FILE 5 : PG4.TOP REMARK 3 TOPOLOGY FILE 6 : PGE.TOP REMARK 3 TOPOLOGY FILE 7 : PEG.TOP REMARK 3 TOPOLOGY FILE 8 : EDO.TOP REMARK 3 TOPOLOGY FILE 9 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 3SWG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000066737. REMARK 200 REMARK 200 AUTHOR USED THE SF DATA FROM ENTRY 2YVW. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.77333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 19.38667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 38.77333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 19.38667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 924 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 ASN A 3 REMARK 465 THR A 4 REMARK 465 THR A 5 REMARK 465 LEU A 6 REMARK 465 TYR A 7 REMARK 465 THR A 8 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 99 100.79 -160.05 REMARK 500 PRO A 185 48.43 -72.43 REMARK 500 ASN A 284 -118.02 62.85 REMARK 500 ILE A 333 -64.14 -103.34 REMARK 500 THR A 374 -5.15 -147.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 512 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 513 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 514 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 515 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 516 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 517 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPZ A 518 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2YVW RELATED DB: PDB REMARK 900 THIS ENTRY 3SWD REFLECTS AN ALTERNATIVE MODELING OF X-RAY DATA REMARK 900 R2YVWSF DBREF 3SWG A 1 425 UNP O67315 MURA_AQUAE 1 425 SEQRES 1 A 425 MET LYS ASN THR THR LEU TYR THR TYR ARG ASP TYR PHE SEQRES 2 A 425 VAL ILE ARG GLY GLY LYS PRO LEU THR GLY LYS VAL LYS SEQRES 3 A 425 ILE SER GLY ALA LYS ASN ALA ALA LEU PRO ILE MET PHE SEQRES 4 A 425 ALA THR ILE LEU THR GLU GLU PRO CYS THR ILE THR ASN SEQRES 5 A 425 VAL PRO ASP LEU LEU ASP VAL ARG ASN THR LEU LEU LEU SEQRES 6 A 425 LEU ARG GLU LEU GLY ALA GLU LEU GLU PHE LEU ASN ASN SEQRES 7 A 425 THR VAL PHE ILE ASN PRO SER ILE ASN SER PHE ILE THR SEQRES 8 A 425 ASN GLN GLU ILE ILE ARG ARG MET ARG ALA SER VAL LEU SEQRES 9 A 425 SER LEU GLY PRO LEU LEU GLY ARG PHE GLY ARG ALA VAL SEQRES 10 A 425 VAL GLY LEU PRO GLY GLY QPA SER ILE GLY ALA ARG PRO SEQRES 11 A 425 ILE ASP GLN HIS LEU LYS PHE PHE LYS GLU ALA GLY ALA SEQRES 12 A 425 ASP VAL GLU VAL ARG GLU GLY TYR VAL TYR VAL ASN LEU SEQRES 13 A 425 LYS GLU LYS ARG ARG VAL HIS PHE LYS PHE ASP LEU VAL SEQRES 14 A 425 THR VAL THR GLY THR GLU ASN ALA LEU LEU TYR LEU ALA SEQRES 15 A 425 SER VAL PRO GLU GLU SER ILE LEU GLU ASN ILE ALA LEU SEQRES 16 A 425 GLU PRO GLU VAL MET ASP LEU ILE GLU VAL LEU LYS LYS SEQRES 17 A 425 MET GLY ALA HIS VAL LYS VAL GLU GLY ARG SER ALA TYR SEQRES 18 A 425 VAL LYS GLY SER GLU ASN LEU LYS GLY PHE THR HIS SER SEQRES 19 A 425 VAL ILE PRO ASP ARG ILE GLU ALA GLY THR PHE MET VAL SEQRES 20 A 425 GLY ALA VAL LEU THR ASP GLY GLU ILE LEU LEU GLU ASN SEQRES 21 A 425 ALA ARG ILE ASN HIS LEU ARG ALA VAL VAL GLU LYS LEU SEQRES 22 A 425 LYS LEU ILE GLY GLY GLU VAL VAL GLU GLU ASN GLY ASN SEQRES 23 A 425 LEU ARG VAL PHE ARG LYS GLU SER LEU ARG ALA CYS ASP SEQRES 24 A 425 ILE GLU THR GLN VAL TYR PRO GLY PHE PRO THR ASP MET SEQRES 25 A 425 GLN ALA GLN PHE MET ALA LEU LEU SER VAL ALA LYS GLY SEQRES 26 A 425 LYS SER ARG ILE LYS GLU ASN ILE PHE GLU HIS ARG PHE SEQRES 27 A 425 HIS HIS ALA GLN GLU LEU ASN ARG LEU GLY ALA ASN ILE SEQRES 28 A 425 THR VAL ARG GLY ASN THR ALA TYR VAL GLU GLY VAL GLU SEQRES 29 A 425 ARG LEU TYR GLY SER GLU VAL TYR SER THR ASP LEU ARG SEQRES 30 A 425 ALA SER ALA SER LEU VAL LEU ALA GLY LEU VAL ALA GLN SEQRES 31 A 425 GLY GLU THR VAL VAL ARG ASP VAL TYR HIS LEU ASP ARG SEQRES 32 A 425 GLY TYR GLU LYS LEU GLU GLU LYS LEU LYS LYS LEU GLY SEQRES 33 A 425 ALA ASP ILE GLU ARG VAL SER GLU LEU MODRES 3SWG QPA A 124 CYS HET QPA A 124 16 HET PG4 A 501 13 HET PG4 A 502 13 HET PG4 A 503 13 HET PGE A 504 10 HET PEG A 505 7 HET PEG A 506 7 HET EDO A 507 4 HET EDO A 508 4 HET EDO A 509 4 HET EDO A 510 4 HET EDO A 511 4 HET EDO A 512 4 HET EDO A 513 4 HET EDO A 514 4 HET EDO A 515 4 HET EDO A 516 4 HET EDO A 517 4 HET EPZ A 518 44 HETNAM QPA S-[(1S)-1-CARBOXY-1-(PHOSPHONOOXY)ETHYL]-L-CYSTEINE HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM PGE TRIETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM EDO 1,2-ETHANEDIOL HETNAM EPZ (2R)-2-{[(2R,3R,4R,5S,6R)-3-(ACETYLAMINO)-2-{[(S)- HETNAM 2 EPZ {[(R)-{[(2R,3S,4R,5R)-5-(2,4-DIOXO-3,4- HETNAM 3 EPZ DIHYDROPYRIMIDIN-1(2H)-YL)-3,4- HETNAM 4 EPZ DIHYDROXYTETRAHYDROFURAN-2-YL]METHOXY}(HYDROXY) HETNAM 5 EPZ PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-5-HYDROXY-6- HETNAM 6 EPZ (HYDROXYMETHYL)TETRAHYDRO-2H-PYRAN-4-YL]OXY}PROPANOIC HETNAM 7 EPZ ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 1 QPA C6 H12 N O8 P S FORMUL 2 PG4 3(C8 H18 O5) FORMUL 5 PGE C6 H14 O4 FORMUL 6 PEG 2(C4 H10 O3) FORMUL 8 EDO 11(C2 H6 O2) FORMUL 19 EPZ C20 H31 N3 O19 P2 FORMUL 20 HOH *348(H2 O) HELIX 1 1 ALA A 30 THR A 41 1 12 HELIX 2 2 ILE A 42 THR A 44 5 3 HELIX 3 3 LEU A 56 LEU A 69 1 14 HELIX 4 4 ASN A 92 MET A 99 1 8 HELIX 5 5 ARG A 100 LEU A 104 5 5 HELIX 6 6 SER A 105 GLY A 114 1 10 HELIX 7 7 ILE A 131 ALA A 141 1 11 HELIX 8 8 THR A 170 ALA A 182 1 13 HELIX 9 9 GLU A 196 MET A 209 1 14 HELIX 10 10 ASP A 238 THR A 252 1 15 HELIX 11 11 ARG A 262 HIS A 265 5 4 HELIX 12 12 LEU A 266 GLY A 277 1 12 HELIX 13 13 PRO A 309 SER A 321 1 13 HELIX 14 14 PHE A 338 ARG A 346 1 9 HELIX 15 15 SER A 379 ALA A 389 1 11 HELIX 16 16 VAL A 398 TYR A 405 1 8 HELIX 17 17 LYS A 407 LEU A 415 1 9 SHEET 1 A 4 GLU A 370 TYR A 372 0 SHEET 2 A 4 GLU A 392 ARG A 396 1 O VAL A 394 N VAL A 371 SHEET 3 A 4 TYR A 12 ARG A 16 -1 N ILE A 15 O THR A 393 SHEET 4 A 4 ILE A 419 VAL A 422 -1 O VAL A 422 N TYR A 12 SHEET 1 B 4 THR A 22 LYS A 26 0 SHEET 2 B 4 GLU A 255 GLU A 259 1 O GLU A 259 N VAL A 25 SHEET 3 B 4 ASN A 286 ARG A 291 -1 O LEU A 287 N LEU A 258 SHEET 4 B 4 GLY A 278 GLU A 283 -1 N VAL A 281 O ARG A 288 SHEET 1 C 4 GLU A 72 LEU A 76 0 SHEET 2 C 4 THR A 79 ASN A 83 -1 O ASN A 83 N GLU A 72 SHEET 3 C 4 CYS A 48 THR A 51 -1 N ILE A 50 O VAL A 80 SHEET 4 C 4 THR A 232 SER A 234 1 O HIS A 233 N THR A 51 SHEET 1 D 4 ILE A 90 THR A 91 0 SHEET 2 D 4 ARG A 115 GLY A 119 1 O VAL A 117 N THR A 91 SHEET 3 D 4 TYR A 151 ASN A 155 -1 O VAL A 152 N VAL A 118 SHEET 4 D 4 ASP A 144 ARG A 148 -1 N GLU A 146 O TYR A 153 SHEET 1 E 4 HIS A 163 LYS A 165 0 SHEET 2 E 4 GLU A 187 GLU A 191 1 O ILE A 189 N PHE A 164 SHEET 3 E 4 SER A 219 LYS A 223 -1 O VAL A 222 N SER A 188 SHEET 4 E 4 HIS A 212 GLU A 216 -1 N LYS A 214 O TYR A 221 SHEET 1 F 4 ILE A 300 GLU A 301 0 SHEET 2 F 4 LYS A 326 LYS A 330 1 O ARG A 328 N ILE A 300 SHEET 3 F 4 THR A 357 GLU A 361 -1 O ALA A 358 N ILE A 329 SHEET 4 F 4 ILE A 351 ARG A 354 -1 N ARG A 354 O THR A 357 LINK C GLY A 123 N QPA A 124 1555 1555 1.33 LINK C QPA A 124 N SER A 125 1555 1555 1.33 CISPEP 1 TYR A 305 PRO A 306 0 0.81 SITE 1 AC1 6 ASP A 132 LYS A 139 VAL A 145 ASN A 350 SITE 2 AC1 6 HOH A 898 HOH A 928 SITE 1 AC2 4 LYS A 326 THR A 352 TYR A 359 GLU A 361 SITE 1 AC3 6 GLU A 255 LEU A 257 ARG A 267 ARG A 288 SITE 2 AC3 6 HOH A 703 HOH A 935 SITE 1 AC4 4 LYS A 165 PHE A 166 ASP A 167 ASN A 192 SITE 1 AC5 5 PRO A 47 THR A 49 PHE A 231 THR A 232 SITE 2 AC5 5 HOH A 901 SITE 1 AC6 5 ALA A 323 LYS A 324 VAL A 363 GLU A 364 SITE 2 AC6 5 HOH A 845 SITE 1 AC7 3 ILE A 90 TYR A 151 TYR A 153 SITE 1 AC8 1 ASN A 83 SITE 1 AC9 2 ARG A 112 GLY A 114 SITE 1 BC1 3 GLU A 146 ARG A 148 TYR A 153 SITE 1 BC2 2 ARG A 60 ARG A 67 SITE 1 BC3 1 PHE A 290 SITE 1 BC4 3 ASN A 284 GLY A 285 ASN A 286 SITE 1 BC5 3 LYS A 214 TYR A 221 ARG A 365 SITE 1 BC6 2 HIS A 163 GLU A 191 SITE 1 BC7 3 GLU A 187 LYS A 223 GLN A 390 SITE 1 BC8 5 LEU A 43 GLU A 45 GLU A 226 HOH A 701 SITE 2 BC8 5 HOH A 863 SITE 1 BC9 32 LYS A 31 ASN A 32 ALA A 101 ARG A 129 SITE 2 BC9 32 PRO A 130 ILE A 131 ASP A 132 GLN A 133 SITE 3 BC9 32 LEU A 168 THR A 170 VAL A 171 THR A 172 SITE 4 BC9 32 THR A 310 ASP A 311 ILE A 333 PHE A 334 SITE 5 BC9 32 VAL A 353 LEU A 376 HOH A 604 HOH A 609 SITE 6 BC9 32 HOH A 615 HOH A 624 HOH A 628 HOH A 633 SITE 7 BC9 32 HOH A 635 HOH A 638 HOH A 640 HOH A 641 SITE 8 BC9 32 HOH A 648 HOH A 804 HOH A 805 HOH A 807 CRYST1 132.000 132.000 58.160 90.00 90.00 120.00 P 62 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007576 0.004374 0.000000 0.00000 SCALE2 0.000000 0.008748 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017194 0.00000