data_3T0O # _entry.id 3T0O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3T0O pdb_00003t0o 10.2210/pdb3t0o/pdb RCSB RCSB066888 ? ? WWPDB D_1000066888 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-07-11 2 'Structure model' 1 1 2012-07-18 3 'Structure model' 1 2 2012-10-10 4 'Structure model' 1 3 2020-07-29 5 'Structure model' 1 4 2023-09-13 6 'Structure model' 1 5 2024-11-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Structure summary' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Refinement description' 10 5 'Structure model' 'Structure summary' 11 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp 2 4 'Structure model' entity 3 4 'Structure model' pdbx_chem_comp_identifier 4 4 'Structure model' pdbx_entity_nonpoly 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site 8 4 'Structure model' struct_site_gen 9 5 'Structure model' chem_comp 10 5 'Structure model' chem_comp_atom 11 5 'Structure model' chem_comp_bond 12 5 'Structure model' database_2 13 5 'Structure model' pdbx_initial_refinement_model 14 6 'Structure model' pdbx_entry_details 15 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_chem_comp.name' 2 4 'Structure model' '_chem_comp.type' 3 4 'Structure model' '_entity.pdbx_description' 4 4 'Structure model' '_pdbx_entity_nonpoly.name' 5 4 'Structure model' '_struct_conn.pdbx_dist_value' 6 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 4 'Structure model' '_struct_conn.pdbx_role' 8 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 10 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 11 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 12 4 'Structure model' '_struct_ref_seq_dif.details' 13 5 'Structure model' '_chem_comp.pdbx_synonyms' 14 5 'Structure model' '_database_2.pdbx_DOI' 15 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3T0O _pdbx_database_status.recvd_initial_deposition_date 2011-07-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Thorn, A.' 1 'Kraetzner, R.' 2 'Steinfeld, R.' 3 'Sheldrick, G.' 4 # _citation.id primary _citation.title 'Structure and activity of the only human RNase T2.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 40 _citation.page_first 8733 _citation.page_last 8742 _citation.year 2012 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22735700 _citation.pdbx_database_id_DOI 10.1093/nar/gks614 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Thorn, A.' 1 ? primary 'Steinfeld, R.' 2 ? primary 'Ziegenbein, M.' 3 ? primary 'Grapp, M.' 4 ? primary 'Hsiao, H.H.' 5 ? primary 'Urlaub, H.' 6 ? primary 'Sheldrick, G.M.' 7 ? primary 'Gartner, J.' 8 ? primary 'Kratzner, R.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ribonuclease T2' 28008.734 1 3.1.27.1 ? 'UNP residues 25-256' ? 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? 3 water nat water 18.015 182 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Ribonuclease 6' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DKRLRDNHEWKKLIMVQHWPETVCEKIQNDCRDPPDYWTIHGLWPDKSEGCNRSWPFNLEEIKDLLPEMRAYWPDVIHSF PNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQC LPPSQDEEVQTIGQIELCLTKQDQQLQNCTEPGEQPSPKQEVWLANGAAESRGLRVCEDGPVFYPPPKKTKHHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;DKRLRDNHEWKKLIMVQHWPETVCEKIQNDCRDPPDYWTIHGLWPDKSEGCNRSWPFNLEEIKDLLPEMRAYWPDVIHSF PNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQC LPPSQDEEVQTIGQIELCLTKQDQQLQNCTEPGEQPSPKQEVWLANGAAESRGLRVCEDGPVFYPPPKKTKHHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 LYS n 1 3 ARG n 1 4 LEU n 1 5 ARG n 1 6 ASP n 1 7 ASN n 1 8 HIS n 1 9 GLU n 1 10 TRP n 1 11 LYS n 1 12 LYS n 1 13 LEU n 1 14 ILE n 1 15 MET n 1 16 VAL n 1 17 GLN n 1 18 HIS n 1 19 TRP n 1 20 PRO n 1 21 GLU n 1 22 THR n 1 23 VAL n 1 24 CYS n 1 25 GLU n 1 26 LYS n 1 27 ILE n 1 28 GLN n 1 29 ASN n 1 30 ASP n 1 31 CYS n 1 32 ARG n 1 33 ASP n 1 34 PRO n 1 35 PRO n 1 36 ASP n 1 37 TYR n 1 38 TRP n 1 39 THR n 1 40 ILE n 1 41 HIS n 1 42 GLY n 1 43 LEU n 1 44 TRP n 1 45 PRO n 1 46 ASP n 1 47 LYS n 1 48 SER n 1 49 GLU n 1 50 GLY n 1 51 CYS n 1 52 ASN n 1 53 ARG n 1 54 SER n 1 55 TRP n 1 56 PRO n 1 57 PHE n 1 58 ASN n 1 59 LEU n 1 60 GLU n 1 61 GLU n 1 62 ILE n 1 63 LYS n 1 64 ASP n 1 65 LEU n 1 66 LEU n 1 67 PRO n 1 68 GLU n 1 69 MET n 1 70 ARG n 1 71 ALA n 1 72 TYR n 1 73 TRP n 1 74 PRO n 1 75 ASP n 1 76 VAL n 1 77 ILE n 1 78 HIS n 1 79 SER n 1 80 PHE n 1 81 PRO n 1 82 ASN n 1 83 ARG n 1 84 SER n 1 85 ARG n 1 86 PHE n 1 87 TRP n 1 88 LYS n 1 89 HIS n 1 90 GLU n 1 91 TRP n 1 92 GLU n 1 93 LYS n 1 94 HIS n 1 95 GLY n 1 96 THR n 1 97 CYS n 1 98 ALA n 1 99 ALA n 1 100 GLN n 1 101 VAL n 1 102 ASP n 1 103 ALA n 1 104 LEU n 1 105 ASN n 1 106 SER n 1 107 GLN n 1 108 LYS n 1 109 LYS n 1 110 TYR n 1 111 PHE n 1 112 GLY n 1 113 ARG n 1 114 SER n 1 115 LEU n 1 116 GLU n 1 117 LEU n 1 118 TYR n 1 119 ARG n 1 120 GLU n 1 121 LEU n 1 122 ASP n 1 123 LEU n 1 124 ASN n 1 125 SER n 1 126 VAL n 1 127 LEU n 1 128 LEU n 1 129 LYS n 1 130 LEU n 1 131 GLY n 1 132 ILE n 1 133 LYS n 1 134 PRO n 1 135 SER n 1 136 ILE n 1 137 ASN n 1 138 TYR n 1 139 TYR n 1 140 GLN n 1 141 VAL n 1 142 ALA n 1 143 ASP n 1 144 PHE n 1 145 LYS n 1 146 ASP n 1 147 ALA n 1 148 LEU n 1 149 ALA n 1 150 ARG n 1 151 VAL n 1 152 TYR n 1 153 GLY n 1 154 VAL n 1 155 ILE n 1 156 PRO n 1 157 LYS n 1 158 ILE n 1 159 GLN n 1 160 CYS n 1 161 LEU n 1 162 PRO n 1 163 PRO n 1 164 SER n 1 165 GLN n 1 166 ASP n 1 167 GLU n 1 168 GLU n 1 169 VAL n 1 170 GLN n 1 171 THR n 1 172 ILE n 1 173 GLY n 1 174 GLN n 1 175 ILE n 1 176 GLU n 1 177 LEU n 1 178 CYS n 1 179 LEU n 1 180 THR n 1 181 LYS n 1 182 GLN n 1 183 ASP n 1 184 GLN n 1 185 GLN n 1 186 LEU n 1 187 GLN n 1 188 ASN n 1 189 CYS n 1 190 THR n 1 191 GLU n 1 192 PRO n 1 193 GLY n 1 194 GLU n 1 195 GLN n 1 196 PRO n 1 197 SER n 1 198 PRO n 1 199 LYS n 1 200 GLN n 1 201 GLU n 1 202 VAL n 1 203 TRP n 1 204 LEU n 1 205 ALA n 1 206 ASN n 1 207 GLY n 1 208 ALA n 1 209 ALA n 1 210 GLU n 1 211 SER n 1 212 ARG n 1 213 GLY n 1 214 LEU n 1 215 ARG n 1 216 VAL n 1 217 CYS n 1 218 GLU n 1 219 ASP n 1 220 GLY n 1 221 PRO n 1 222 VAL n 1 223 PHE n 1 224 TYR n 1 225 PRO n 1 226 PRO n 1 227 PRO n 1 228 LYS n 1 229 LYS n 1 230 THR n 1 231 LYS n 1 232 HIS n 1 233 HIS n 1 234 HIS n 1 235 HIS n 1 236 HIS n 1 237 HIS n 1 238 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'RNASET2, RNASE6PL' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details secreted _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line HEK293 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 25 ? ? ? A . n A 1 2 LYS 2 26 ? ? ? A . n A 1 3 ARG 3 27 ? ? ? A . n A 1 4 LEU 4 28 ? ? ? A . n A 1 5 ARG 5 29 ? ? ? A . n A 1 6 ASP 6 30 ? ? ? A . n A 1 7 ASN 7 31 ? ? ? A . n A 1 8 HIS 8 32 ? ? ? A . n A 1 9 GLU 9 33 ? ? ? A . n A 1 10 TRP 10 34 34 TRP TRP A . n A 1 11 LYS 11 35 35 LYS LYS A . n A 1 12 LYS 12 36 36 LYS LYS A . n A 1 13 LEU 13 37 37 LEU LEU A . n A 1 14 ILE 14 38 38 ILE ILE A . n A 1 15 MET 15 39 39 MET MET A . n A 1 16 VAL 16 40 40 VAL VAL A . n A 1 17 GLN 17 41 41 GLN GLN A . n A 1 18 HIS 18 42 42 HIS HIS A . n A 1 19 TRP 19 43 43 TRP TRP A . n A 1 20 PRO 20 44 44 PRO PRO A . n A 1 21 GLU 21 45 45 GLU GLU A . n A 1 22 THR 22 46 46 THR THR A . n A 1 23 VAL 23 47 47 VAL VAL A . n A 1 24 CYS 24 48 48 CYS CYS A . n A 1 25 GLU 25 49 49 GLU GLU A . n A 1 26 LYS 26 50 50 LYS LYS A . n A 1 27 ILE 27 51 51 ILE ILE A . n A 1 28 GLN 28 52 52 GLN GLN A . n A 1 29 ASN 29 53 53 ASN ASN A . n A 1 30 ASP 30 54 54 ASP ASP A . n A 1 31 CYS 31 55 55 CYS CYS A . n A 1 32 ARG 32 56 56 ARG ARG A . n A 1 33 ASP 33 57 57 ASP ASP A . n A 1 34 PRO 34 58 58 PRO PRO A . n A 1 35 PRO 35 59 59 PRO PRO A . n A 1 36 ASP 36 60 60 ASP ASP A . n A 1 37 TYR 37 61 61 TYR TYR A . n A 1 38 TRP 38 62 62 TRP TRP A . n A 1 39 THR 39 63 63 THR THR A . n A 1 40 ILE 40 64 64 ILE ILE A . n A 1 41 HIS 41 65 65 HIS HIS A . n A 1 42 GLY 42 66 66 GLY GLY A . n A 1 43 LEU 43 67 67 LEU LEU A . n A 1 44 TRP 44 68 68 TRP TRP A . n A 1 45 PRO 45 69 69 PRO PRO A . n A 1 46 ASP 46 70 70 ASP ASP A . n A 1 47 LYS 47 71 71 LYS LYS A . n A 1 48 SER 48 72 72 SER SER A . n A 1 49 GLU 49 73 73 GLU GLU A . n A 1 50 GLY 50 74 74 GLY GLY A . n A 1 51 CYS 51 75 75 CYS CYS A . n A 1 52 ASN 52 76 76 ASN ASN A . n A 1 53 ARG 53 77 77 ARG ARG A . n A 1 54 SER 54 78 78 SER SER A . n A 1 55 TRP 55 79 79 TRP TRP A . n A 1 56 PRO 56 80 80 PRO PRO A . n A 1 57 PHE 57 81 81 PHE PHE A . n A 1 58 ASN 58 82 82 ASN ASN A . n A 1 59 LEU 59 83 83 LEU LEU A . n A 1 60 GLU 60 84 84 GLU GLU A . n A 1 61 GLU 61 85 85 GLU GLU A . n A 1 62 ILE 62 86 86 ILE ILE A . n A 1 63 LYS 63 87 87 LYS LYS A . n A 1 64 ASP 64 88 88 ASP ASP A . n A 1 65 LEU 65 89 89 LEU LEU A . n A 1 66 LEU 66 90 90 LEU LEU A . n A 1 67 PRO 67 91 91 PRO PRO A . n A 1 68 GLU 68 92 92 GLU GLU A . n A 1 69 MET 69 93 93 MET MET A . n A 1 70 ARG 70 94 94 ARG ARG A . n A 1 71 ALA 71 95 95 ALA ALA A . n A 1 72 TYR 72 96 96 TYR TYR A . n A 1 73 TRP 73 97 97 TRP TRP A . n A 1 74 PRO 74 98 98 PRO PRO A . n A 1 75 ASP 75 99 99 ASP ASP A . n A 1 76 VAL 76 100 100 VAL VAL A . n A 1 77 ILE 77 101 101 ILE ILE A . n A 1 78 HIS 78 102 102 HIS HIS A . n A 1 79 SER 79 103 103 SER SER A . n A 1 80 PHE 80 104 104 PHE PHE A . n A 1 81 PRO 81 105 105 PRO PRO A . n A 1 82 ASN 82 106 106 ASN ASN A . n A 1 83 ARG 83 107 107 ARG ARG A . n A 1 84 SER 84 108 108 SER SER A . n A 1 85 ARG 85 109 109 ARG ARG A . n A 1 86 PHE 86 110 110 PHE PHE A . n A 1 87 TRP 87 111 111 TRP TRP A . n A 1 88 LYS 88 112 112 LYS LYS A . n A 1 89 HIS 89 113 113 HIS HIS A . n A 1 90 GLU 90 114 114 GLU GLU A . n A 1 91 TRP 91 115 115 TRP TRP A . n A 1 92 GLU 92 116 116 GLU GLU A . n A 1 93 LYS 93 117 117 LYS LYS A . n A 1 94 HIS 94 118 118 HIS HIS A . n A 1 95 GLY 95 119 119 GLY GLY A . n A 1 96 THR 96 120 120 THR THR A . n A 1 97 CYS 97 121 121 CYS CYS A . n A 1 98 ALA 98 122 122 ALA ALA A . n A 1 99 ALA 99 123 123 ALA ALA A . n A 1 100 GLN 100 124 124 GLN GLN A . n A 1 101 VAL 101 125 125 VAL VAL A . n A 1 102 ASP 102 126 126 ASP ASP A . n A 1 103 ALA 103 127 127 ALA ALA A . n A 1 104 LEU 104 128 128 LEU LEU A . n A 1 105 ASN 105 129 129 ASN ASN A . n A 1 106 SER 106 130 130 SER SER A . n A 1 107 GLN 107 131 131 GLN GLN A . n A 1 108 LYS 108 132 132 LYS LYS A . n A 1 109 LYS 109 133 133 LYS LYS A . n A 1 110 TYR 110 134 134 TYR TYR A . n A 1 111 PHE 111 135 135 PHE PHE A . n A 1 112 GLY 112 136 136 GLY GLY A . n A 1 113 ARG 113 137 137 ARG ARG A . n A 1 114 SER 114 138 138 SER SER A . n A 1 115 LEU 115 139 139 LEU LEU A . n A 1 116 GLU 116 140 140 GLU GLU A . n A 1 117 LEU 117 141 141 LEU LEU A . n A 1 118 TYR 118 142 142 TYR TYR A . n A 1 119 ARG 119 143 143 ARG ARG A . n A 1 120 GLU 120 144 144 GLU GLU A . n A 1 121 LEU 121 145 145 LEU LEU A . n A 1 122 ASP 122 146 146 ASP ASP A . n A 1 123 LEU 123 147 147 LEU LEU A . n A 1 124 ASN 124 148 148 ASN ASN A . n A 1 125 SER 125 149 149 SER SER A . n A 1 126 VAL 126 150 150 VAL VAL A . n A 1 127 LEU 127 151 151 LEU LEU A . n A 1 128 LEU 128 152 152 LEU LEU A . n A 1 129 LYS 129 153 153 LYS LYS A . n A 1 130 LEU 130 154 154 LEU LEU A . n A 1 131 GLY 131 155 155 GLY GLY A . n A 1 132 ILE 132 156 156 ILE ILE A . n A 1 133 LYS 133 157 157 LYS LYS A . n A 1 134 PRO 134 158 158 PRO PRO A . n A 1 135 SER 135 159 159 SER SER A . n A 1 136 ILE 136 160 160 ILE ILE A . n A 1 137 ASN 137 161 161 ASN ASN A . n A 1 138 TYR 138 162 162 TYR TYR A . n A 1 139 TYR 139 163 163 TYR TYR A . n A 1 140 GLN 140 164 164 GLN GLN A . n A 1 141 VAL 141 165 165 VAL VAL A . n A 1 142 ALA 142 166 166 ALA ALA A . n A 1 143 ASP 143 167 167 ASP ASP A . n A 1 144 PHE 144 168 168 PHE PHE A . n A 1 145 LYS 145 169 169 LYS LYS A . n A 1 146 ASP 146 170 170 ASP ASP A . n A 1 147 ALA 147 171 171 ALA ALA A . n A 1 148 LEU 148 172 172 LEU LEU A . n A 1 149 ALA 149 173 173 ALA ALA A . n A 1 150 ARG 150 174 174 ARG ARG A . n A 1 151 VAL 151 175 175 VAL VAL A . n A 1 152 TYR 152 176 176 TYR TYR A . n A 1 153 GLY 153 177 177 GLY GLY A . n A 1 154 VAL 154 178 178 VAL VAL A . n A 1 155 ILE 155 179 179 ILE ILE A . n A 1 156 PRO 156 180 180 PRO PRO A . n A 1 157 LYS 157 181 181 LYS LYS A . n A 1 158 ILE 158 182 182 ILE ILE A . n A 1 159 GLN 159 183 183 GLN GLN A . n A 1 160 CYS 160 184 184 CYS CYS A . n A 1 161 LEU 161 185 185 LEU LEU A . n A 1 162 PRO 162 186 186 PRO PRO A . n A 1 163 PRO 163 187 187 PRO PRO A . n A 1 164 SER 164 188 188 SER SER A . n A 1 165 GLN 165 189 ? ? ? A . n A 1 166 ASP 166 190 ? ? ? A . n A 1 167 GLU 167 191 ? ? ? A . n A 1 168 GLU 168 192 192 GLU GLU A . n A 1 169 VAL 169 193 193 VAL VAL A . n A 1 170 GLN 170 194 194 GLN GLN A . n A 1 171 THR 171 195 195 THR THR A . n A 1 172 ILE 172 196 196 ILE ILE A . n A 1 173 GLY 173 197 197 GLY GLY A . n A 1 174 GLN 174 198 198 GLN GLN A . n A 1 175 ILE 175 199 199 ILE ILE A . n A 1 176 GLU 176 200 200 GLU GLU A . n A 1 177 LEU 177 201 201 LEU LEU A . n A 1 178 CYS 178 202 202 CYS CYS A . n A 1 179 LEU 179 203 203 LEU LEU A . n A 1 180 THR 180 204 204 THR THR A . n A 1 181 LYS 181 205 205 LYS LYS A . n A 1 182 GLN 182 206 206 GLN GLN A . n A 1 183 ASP 183 207 207 ASP ASP A . n A 1 184 GLN 184 208 208 GLN GLN A . n A 1 185 GLN 185 209 209 GLN GLN A . n A 1 186 LEU 186 210 210 LEU LEU A . n A 1 187 GLN 187 211 211 GLN GLN A . n A 1 188 ASN 188 212 212 ASN ASN A . n A 1 189 CYS 189 213 213 CYS CYS A . n A 1 190 THR 190 214 214 THR THR A . n A 1 191 GLU 191 215 ? ? ? A . n A 1 192 PRO 192 216 ? ? ? A . n A 1 193 GLY 193 217 ? ? ? A . n A 1 194 GLU 194 218 ? ? ? A . n A 1 195 GLN 195 219 ? ? ? A . n A 1 196 PRO 196 220 ? ? ? A . n A 1 197 SER 197 221 ? ? ? A . n A 1 198 PRO 198 222 ? ? ? A . n A 1 199 LYS 199 223 ? ? ? A . n A 1 200 GLN 200 224 ? ? ? A . n A 1 201 GLU 201 225 ? ? ? A . n A 1 202 VAL 202 226 ? ? ? A . n A 1 203 TRP 203 227 ? ? ? A . n A 1 204 LEU 204 228 ? ? ? A . n A 1 205 ALA 205 229 ? ? ? A . n A 1 206 ASN 206 230 ? ? ? A . n A 1 207 GLY 207 231 ? ? ? A . n A 1 208 ALA 208 232 ? ? ? A . n A 1 209 ALA 209 233 ? ? ? A . n A 1 210 GLU 210 234 ? ? ? A . n A 1 211 SER 211 235 235 SER SER A . n A 1 212 ARG 212 236 236 ARG ARG A . n A 1 213 GLY 213 237 237 GLY GLY A . n A 1 214 LEU 214 238 238 LEU LEU A . n A 1 215 ARG 215 239 239 ARG ARG A . n A 1 216 VAL 216 240 240 VAL VAL A . n A 1 217 CYS 217 241 241 CYS CYS A . n A 1 218 GLU 218 242 242 GLU GLU A . n A 1 219 ASP 219 243 243 ASP ASP A . n A 1 220 GLY 220 244 244 GLY GLY A . n A 1 221 PRO 221 245 245 PRO PRO A . n A 1 222 VAL 222 246 246 VAL VAL A . n A 1 223 PHE 223 247 247 PHE PHE A . n A 1 224 TYR 224 248 248 TYR TYR A . n A 1 225 PRO 225 249 249 PRO PRO A . n A 1 226 PRO 226 250 250 PRO PRO A . n A 1 227 PRO 227 251 251 PRO PRO A . n A 1 228 LYS 228 252 252 LYS LYS A . n A 1 229 LYS 229 253 ? ? ? A . n A 1 230 THR 230 254 ? ? ? A . n A 1 231 LYS 231 255 ? ? ? A . n A 1 232 HIS 232 256 ? ? ? A . n A 1 233 HIS 233 257 ? ? ? A . n A 1 234 HIS 234 258 ? ? ? A . n A 1 235 HIS 235 259 ? ? ? A . n A 1 236 HIS 236 260 ? ? ? A . n A 1 237 HIS 237 261 ? ? ? A . n A 1 238 HIS 238 262 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG 1 263 1 NAG NAG A . C 2 NAG 1 264 1 NAG NAG A . D 3 HOH 1 265 1 HOH HOH A . D 3 HOH 2 266 2 HOH HOH A . D 3 HOH 3 267 3 HOH HOH A . D 3 HOH 4 268 4 HOH HOH A . D 3 HOH 5 269 5 HOH HOH A . D 3 HOH 6 270 6 HOH HOH A . D 3 HOH 7 271 8 HOH HOH A . D 3 HOH 8 272 9 HOH HOH A . D 3 HOH 9 273 10 HOH HOH A . D 3 HOH 10 274 11 HOH HOH A . D 3 HOH 11 275 12 HOH HOH A . D 3 HOH 12 276 13 HOH HOH A . D 3 HOH 13 277 14 HOH HOH A . D 3 HOH 14 278 15 HOH HOH A . D 3 HOH 15 279 16 HOH HOH A . D 3 HOH 16 280 18 HOH HOH A . D 3 HOH 17 281 19 HOH HOH A . D 3 HOH 18 282 20 HOH HOH A . D 3 HOH 19 283 21 HOH HOH A . D 3 HOH 20 284 22 HOH HOH A . D 3 HOH 21 285 23 HOH HOH A . D 3 HOH 22 286 24 HOH HOH A . D 3 HOH 23 287 25 HOH HOH A . D 3 HOH 24 288 26 HOH HOH A . D 3 HOH 25 289 27 HOH HOH A . D 3 HOH 26 290 28 HOH HOH A . D 3 HOH 27 291 29 HOH HOH A . D 3 HOH 28 292 30 HOH HOH A . D 3 HOH 29 293 31 HOH HOH A . D 3 HOH 30 294 32 HOH HOH A . D 3 HOH 31 295 33 HOH HOH A . D 3 HOH 32 296 34 HOH HOH A . D 3 HOH 33 297 35 HOH HOH A . D 3 HOH 34 298 36 HOH HOH A . D 3 HOH 35 299 37 HOH HOH A . D 3 HOH 36 300 38 HOH HOH A . D 3 HOH 37 301 39 HOH HOH A . D 3 HOH 38 302 40 HOH HOH A . D 3 HOH 39 303 41 HOH HOH A . D 3 HOH 40 304 42 HOH HOH A . D 3 HOH 41 305 43 HOH HOH A . D 3 HOH 42 306 44 HOH HOH A . D 3 HOH 43 307 45 HOH HOH A . D 3 HOH 44 308 46 HOH HOH A . D 3 HOH 45 309 47 HOH HOH A . D 3 HOH 46 310 48 HOH HOH A . D 3 HOH 47 311 49 HOH HOH A . D 3 HOH 48 312 50 HOH HOH A . D 3 HOH 49 313 51 HOH HOH A . D 3 HOH 50 314 52 HOH HOH A . D 3 HOH 51 315 53 HOH HOH A . D 3 HOH 52 316 54 HOH HOH A . D 3 HOH 53 317 55 HOH HOH A . D 3 HOH 54 318 56 HOH HOH A . D 3 HOH 55 319 57 HOH HOH A . D 3 HOH 56 320 58 HOH HOH A . D 3 HOH 57 321 59 HOH HOH A . D 3 HOH 58 322 60 HOH HOH A . D 3 HOH 59 323 61 HOH HOH A . D 3 HOH 60 324 62 HOH HOH A . D 3 HOH 61 325 63 HOH HOH A . D 3 HOH 62 326 64 HOH HOH A . D 3 HOH 63 327 65 HOH HOH A . D 3 HOH 64 328 66 HOH HOH A . D 3 HOH 65 329 67 HOH HOH A . D 3 HOH 66 330 68 HOH HOH A . D 3 HOH 67 331 69 HOH HOH A . D 3 HOH 68 332 70 HOH HOH A . D 3 HOH 69 333 71 HOH HOH A . D 3 HOH 70 334 72 HOH HOH A . D 3 HOH 71 335 73 HOH HOH A . D 3 HOH 72 336 74 HOH HOH A . D 3 HOH 73 337 75 HOH HOH A . D 3 HOH 74 338 76 HOH HOH A . D 3 HOH 75 339 77 HOH HOH A . D 3 HOH 76 340 78 HOH HOH A . D 3 HOH 77 341 79 HOH HOH A . D 3 HOH 78 342 80 HOH HOH A . D 3 HOH 79 343 81 HOH HOH A . D 3 HOH 80 344 82 HOH HOH A . D 3 HOH 81 345 83 HOH HOH A . D 3 HOH 82 346 84 HOH HOH A . D 3 HOH 83 347 85 HOH HOH A . D 3 HOH 84 348 86 HOH HOH A . D 3 HOH 85 349 87 HOH HOH A . D 3 HOH 86 350 88 HOH HOH A . D 3 HOH 87 351 89 HOH HOH A . D 3 HOH 88 352 90 HOH HOH A . D 3 HOH 89 353 91 HOH HOH A . D 3 HOH 90 354 92 HOH HOH A . D 3 HOH 91 355 93 HOH HOH A . D 3 HOH 92 356 94 HOH HOH A . D 3 HOH 93 357 95 HOH HOH A . D 3 HOH 94 358 96 HOH HOH A . D 3 HOH 95 359 97 HOH HOH A . D 3 HOH 96 360 98 HOH HOH A . D 3 HOH 97 361 99 HOH HOH A . D 3 HOH 98 362 100 HOH HOH A . D 3 HOH 99 363 101 HOH HOH A . D 3 HOH 100 364 102 HOH HOH A . D 3 HOH 101 365 103 HOH HOH A . D 3 HOH 102 366 104 HOH HOH A . D 3 HOH 103 367 105 HOH HOH A . D 3 HOH 104 368 106 HOH HOH A . D 3 HOH 105 369 107 HOH HOH A . D 3 HOH 106 370 108 HOH HOH A . D 3 HOH 107 371 109 HOH HOH A . D 3 HOH 108 372 110 HOH HOH A . D 3 HOH 109 373 111 HOH HOH A . D 3 HOH 110 374 112 HOH HOH A . D 3 HOH 111 375 113 HOH HOH A . D 3 HOH 112 376 114 HOH HOH A . D 3 HOH 113 377 115 HOH HOH A . D 3 HOH 114 378 116 HOH HOH A . D 3 HOH 115 379 117 HOH HOH A . D 3 HOH 116 380 118 HOH HOH A . D 3 HOH 117 381 119 HOH HOH A . D 3 HOH 118 382 120 HOH HOH A . D 3 HOH 119 383 121 HOH HOH A . D 3 HOH 120 384 122 HOH HOH A . D 3 HOH 121 385 123 HOH HOH A . D 3 HOH 122 386 124 HOH HOH A . D 3 HOH 123 387 125 HOH HOH A . D 3 HOH 124 388 126 HOH HOH A . D 3 HOH 125 389 127 HOH HOH A . D 3 HOH 126 390 128 HOH HOH A . D 3 HOH 127 391 129 HOH HOH A . D 3 HOH 128 392 130 HOH HOH A . D 3 HOH 129 393 131 HOH HOH A . D 3 HOH 130 394 132 HOH HOH A . D 3 HOH 131 395 133 HOH HOH A . D 3 HOH 132 396 134 HOH HOH A . D 3 HOH 133 397 135 HOH HOH A . D 3 HOH 134 398 136 HOH HOH A . D 3 HOH 135 399 137 HOH HOH A . D 3 HOH 136 400 138 HOH HOH A . D 3 HOH 137 401 139 HOH HOH A . D 3 HOH 138 402 140 HOH HOH A . D 3 HOH 139 403 141 HOH HOH A . D 3 HOH 140 404 142 HOH HOH A . D 3 HOH 141 405 143 HOH HOH A . D 3 HOH 142 406 144 HOH HOH A . D 3 HOH 143 407 145 HOH HOH A . D 3 HOH 144 408 146 HOH HOH A . D 3 HOH 145 409 147 HOH HOH A . D 3 HOH 146 410 148 HOH HOH A . D 3 HOH 147 411 149 HOH HOH A . D 3 HOH 148 412 150 HOH HOH A . D 3 HOH 149 413 151 HOH HOH A . D 3 HOH 150 414 152 HOH HOH A . D 3 HOH 151 415 153 HOH HOH A . D 3 HOH 152 416 154 HOH HOH A . D 3 HOH 153 417 155 HOH HOH A . D 3 HOH 154 418 156 HOH HOH A . D 3 HOH 155 419 157 HOH HOH A . D 3 HOH 156 420 158 HOH HOH A . D 3 HOH 157 421 159 HOH HOH A . D 3 HOH 158 422 160 HOH HOH A . D 3 HOH 159 423 161 HOH HOH A . D 3 HOH 160 424 162 HOH HOH A . D 3 HOH 161 425 163 HOH HOH A . D 3 HOH 162 426 164 HOH HOH A . D 3 HOH 163 427 165 HOH HOH A . D 3 HOH 164 428 166 HOH HOH A . D 3 HOH 165 429 167 HOH HOH A . D 3 HOH 166 430 168 HOH HOH A . D 3 HOH 167 431 169 HOH HOH A . D 3 HOH 168 432 170 HOH HOH A . D 3 HOH 169 433 171 HOH HOH A . D 3 HOH 170 434 172 HOH HOH A . D 3 HOH 171 435 173 HOH HOH A . D 3 HOH 172 436 174 HOH HOH A . D 3 HOH 173 437 175 HOH HOH A . D 3 HOH 174 438 176 HOH HOH A . D 3 HOH 175 439 177 HOH HOH A . D 3 HOH 176 440 178 HOH HOH A . D 3 HOH 177 441 179 HOH HOH A . D 3 HOH 178 442 180 HOH HOH A . D 3 HOH 179 443 181 HOH HOH A . D 3 HOH 180 444 182 HOH HOH A . D 3 HOH 181 445 183 HOH HOH A . D 3 HOH 182 446 184 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 72 ? OG ? A SER 48 OG 2 1 Y 1 A ARG 77 ? CG ? A ARG 53 CG 3 1 Y 1 A ARG 77 ? CD ? A ARG 53 CD 4 1 Y 1 A ARG 77 ? NE ? A ARG 53 NE 5 1 Y 1 A ARG 77 ? CZ ? A ARG 53 CZ 6 1 Y 1 A ARG 77 ? NH1 ? A ARG 53 NH1 7 1 Y 1 A ARG 77 ? NH2 ? A ARG 53 NH2 8 1 Y 1 A GLU 84 ? CD ? A GLU 60 CD 9 1 Y 1 A GLU 84 ? OE1 ? A GLU 60 OE1 10 1 Y 1 A GLU 84 ? OE2 ? A GLU 60 OE2 11 1 Y 1 A LYS 87 ? CG ? A LYS 63 CG 12 1 Y 1 A LYS 87 ? CD ? A LYS 63 CD 13 1 Y 1 A LYS 87 ? CE ? A LYS 63 CE 14 1 Y 1 A LYS 87 ? NZ ? A LYS 63 NZ 15 1 Y 1 A LYS 181 ? CE ? A LYS 157 CE 16 1 Y 1 A LYS 181 ? NZ ? A LYS 157 NZ 17 1 Y 1 A SER 235 ? OG ? A SER 211 OG 18 1 Y 1 A LYS 252 ? CG ? A LYS 228 CG 19 1 Y 1 A LYS 252 ? CD ? A LYS 228 CD 20 1 Y 1 A LYS 252 ? CE ? A LYS 228 CE 21 1 Y 1 A LYS 252 ? NZ ? A LYS 228 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 PHASER phasing '/ SHELXE' ? 2 REFMAC refinement 5.5.0109 ? 3 XDS 'data reduction' . ? 4 SADABS 'data scaling' . ? 5 # _cell.entry_id 3T0O _cell.length_a 31.200 _cell.length_b 67.400 _cell.length_c 47.900 _cell.angle_alpha 90.00 _cell.angle_beta 90.81 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3T0O _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3T0O _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.797959 _exptl_crystal.density_percent_sol 31.589108 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details '15% PEG3350, 0.2 M ammonium nitrate, macroseeding, no buffer, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RAYONIX MX-225' _diffrn_detector.pdbx_collection_date 2011-03-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'KMC-1 double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9184 1.0 2 0.9810 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9184,0.9810 # _reflns.entry_id 3T0O _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F -3.0 _reflns.d_resolution_low 28.31 _reflns.d_resolution_high 1.585 _reflns.number_obs 26433 _reflns.number_all 26985 _reflns.percent_possible_obs 98.0 _reflns.pdbx_Rmerge_I_obs 0.0632 _reflns.pdbx_Rsym_value 0.0632 _reflns.pdbx_netI_over_sigmaI 171.0 _reflns.B_iso_Wilson_estimate 24.34 _reflns.pdbx_redundancy 5.91 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.59 _reflns_shell.d_res_low 1.69 _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs 0.1914 _reflns_shell.pdbx_Rsym_value 0.1914 _reflns_shell.meanI_over_sigI_obs 5.04 _reflns_shell.pdbx_redundancy 2.55 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 4246 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3T0O _refine.ls_number_reflns_obs 25064 _refine.ls_number_reflns_all 25576 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.56 _refine.ls_d_res_high 1.59 _refine.ls_percent_reflns_obs 98.00 _refine.ls_R_factor_obs 0.15378 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.15182 _refine.ls_R_factor_R_free 0.19033 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1347 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.968 _refine.correlation_coeff_Fo_to_Fc_free 0.951 _refine.B_iso_mean 18.886 _refine.aniso_B[1][1] -0.43 _refine.aniso_B[2][2] 1.03 _refine.aniso_B[3][3] -0.60 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.20 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : RESIDUAL ONLY ; _refine.pdbx_starting_model 'PDB ENTRY 1DIX' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.084 _refine.overall_SU_ML 0.036 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.181 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.080 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1599 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 182 _refine_hist.number_atoms_total 1809 _refine_hist.d_res_high 1.59 _refine_hist.d_res_low 27.56 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.021 0.022 ? 1736 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2.057 1.969 ? 2377 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.151 5.000 ? 209 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 40.787 24.235 ? 85 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 12.682 15.000 ? 290 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 20.752 15.000 ? 11 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.142 0.200 ? 251 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.012 0.021 ? 1347 ? 'X-RAY DIFFRACTION' r_mcbond_it 1.294 1.500 ? 1008 ? 'X-RAY DIFFRACTION' r_mcangle_it 2.167 2.000 ? 1645 ? 'X-RAY DIFFRACTION' r_scbond_it 3.137 3.000 ? 728 ? 'X-RAY DIFFRACTION' r_scangle_it 4.845 4.500 ? 724 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.585 _refine_ls_shell.d_res_low 1.626 _refine_ls_shell.number_reflns_R_work 1513 _refine_ls_shell.R_factor_R_work 0.185 _refine_ls_shell.percent_reflns_obs 80.11 _refine_ls_shell.R_factor_R_free 0.264 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 82 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1311 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3T0O _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3T0O _struct.title 'Crystal Structure Analysis of Human RNase T2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3T0O _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'RNaseT2, alpha/beta fold, ribonuclease, RNA cleavage, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RNT2_HUMAN _struct_ref.pdbx_db_accession O00584 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DKRLRDNHEWKKLIMVQHWPETVCEKIQNDCRDPPDYWTIHGLWPDKSEGCNRSWPFNLEEIKDLLPEMRAYWPDVIHSF PNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQC LPPSQDEEVQTIGQIELCLTKQDQQLQNCTEPGEQPSPKQEVWLANGAAESRGLRVCEDGPVFYPPPKKTKH ; _struct_ref.pdbx_align_begin 25 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3T0O _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 232 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O00584 _struct_ref_seq.db_align_beg 25 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 256 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 25 _struct_ref_seq.pdbx_auth_seq_align_end 256 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3T0O HIS A 233 ? UNP O00584 ? ? 'expression tag' 257 1 1 3T0O HIS A 234 ? UNP O00584 ? ? 'expression tag' 258 2 1 3T0O HIS A 235 ? UNP O00584 ? ? 'expression tag' 259 3 1 3T0O HIS A 236 ? UNP O00584 ? ? 'expression tag' 260 4 1 3T0O HIS A 237 ? UNP O00584 ? ? 'expression tag' 261 5 1 3T0O HIS A 238 ? UNP O00584 ? ? 'expression tag' 262 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TRP A 19 ? CYS A 24 ? TRP A 43 CYS A 48 1 ? 6 HELX_P HELX_P2 2 GLN A 28 ? ARG A 32 ? GLN A 52 ARG A 56 5 ? 5 HELX_P HELX_P3 3 ASN A 58 ? ASP A 64 ? ASN A 82 ASP A 88 5 ? 7 HELX_P HELX_P4 4 LEU A 65 ? TRP A 73 ? LEU A 89 TRP A 97 1 ? 9 HELX_P HELX_P5 5 ARG A 83 ? HIS A 94 ? ARG A 107 HIS A 118 1 ? 12 HELX_P HELX_P6 6 HIS A 94 ? ALA A 99 ? HIS A 118 ALA A 123 1 ? 6 HELX_P HELX_P7 7 GLN A 100 ? ASN A 105 ? GLN A 124 ASN A 129 5 ? 6 HELX_P HELX_P8 8 SER A 106 ? ASP A 122 ? SER A 130 ASP A 146 1 ? 17 HELX_P HELX_P9 9 ASP A 122 ? LEU A 130 ? ASP A 146 LEU A 154 1 ? 9 HELX_P HELX_P10 10 VAL A 141 ? GLY A 153 ? VAL A 165 GLY A 177 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 24 SG ? ? ? 1_555 A CYS 31 SG ? ? A CYS 48 A CYS 55 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf2 disulf ? ? A CYS 51 SG ? ? ? 1_555 A CYS 97 SG ? ? A CYS 75 A CYS 121 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf3 disulf ? ? A CYS 160 SG ? ? ? 1_555 A CYS 217 SG ? ? A CYS 184 A CYS 241 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf4 disulf ? ? A CYS 178 SG ? ? ? 1_555 A CYS 189 SG ? ? A CYS 202 A CYS 213 1_555 ? ? ? ? ? ? ? 2.044 ? ? covale1 covale one ? A ASN 52 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 76 A NAG 263 1_555 ? ? ? ? ? ? ? 1.448 ? N-Glycosylation covale2 covale one ? A ASN 188 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 212 A NAG 264 1_555 ? ? ? ? ? ? ? 1.445 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG B . ? ASN A 52 ? NAG A 263 ? 1_555 ASN A 76 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG C . ? ASN A 188 ? NAG A 264 ? 1_555 ASN A 212 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 CYS A 24 ? CYS A 31 ? CYS A 48 ? 1_555 CYS A 55 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 51 ? CYS A 97 ? CYS A 75 ? 1_555 CYS A 121 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 160 ? CYS A 217 ? CYS A 184 ? 1_555 CYS A 241 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS A 178 ? CYS A 189 ? CYS A 202 ? 1_555 CYS A 213 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 39 ? PRO A 45 ? THR A 63 PRO A 69 A 2 LYS A 12 ? HIS A 18 ? LYS A 36 HIS A 42 A 3 THR A 171 ? THR A 180 ? THR A 195 THR A 204 A 4 LEU A 186 ? GLN A 187 ? LEU A 210 GLN A 211 B 1 THR A 39 ? PRO A 45 ? THR A 63 PRO A 69 B 2 LYS A 12 ? HIS A 18 ? LYS A 36 HIS A 42 B 3 THR A 171 ? THR A 180 ? THR A 195 THR A 204 B 4 LYS A 157 ? LEU A 161 ? LYS A 181 LEU A 185 B 5 ARG A 215 ? VAL A 216 ? ARG A 239 VAL A 240 C 1 TYR A 139 ? GLN A 140 ? TYR A 163 GLN A 164 C 2 PRO A 221 ? VAL A 222 ? PRO A 245 VAL A 246 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TRP A 44 ? O TRP A 68 N ILE A 14 ? N ILE A 38 A 2 3 N MET A 15 ? N MET A 39 O LEU A 177 ? O LEU A 201 A 3 4 N CYS A 178 ? N CYS A 202 O GLN A 187 ? O GLN A 211 B 1 2 O TRP A 44 ? O TRP A 68 N ILE A 14 ? N ILE A 38 B 2 3 N MET A 15 ? N MET A 39 O LEU A 177 ? O LEU A 201 B 3 4 O GLN A 174 ? O GLN A 198 N GLN A 159 ? N GLN A 183 B 4 5 N CYS A 160 ? N CYS A 184 O ARG A 215 ? O ARG A 239 C 1 2 N TYR A 139 ? N TYR A 163 O VAL A 222 ? O VAL A 246 # _pdbx_entry_details.entry_id 3T0O _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 304 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 421 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A LEU 185 ? ? CG A LEU 185 ? ? CD1 A LEU 185 ? ? 100.67 111.00 -10.33 1.70 N 2 1 NE A ARG 236 ? ? CZ A ARG 236 ? ? NH1 A ARG 236 ? ? 117.25 120.30 -3.05 0.50 N 3 1 NE A ARG 236 ? ? CZ A ARG 236 ? ? NH2 A ARG 236 ? ? 123.30 120.30 3.00 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 53 ? ? 54.24 -124.56 2 1 ASP A 60 ? ? -92.53 40.16 3 1 ASP A 60 ? ? -90.90 38.37 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 188 A ASN 212 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 52 A ASN 76 ? ASN 'GLYCOSYLATION SITE' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 8.8550 _pdbx_refine_tls.origin_y 9.1680 _pdbx_refine_tls.origin_z 9.5330 _pdbx_refine_tls.T[1][1] 0.0378 _pdbx_refine_tls.T[2][2] 0.0189 _pdbx_refine_tls.T[3][3] 0.0759 _pdbx_refine_tls.T[1][2] -0.0066 _pdbx_refine_tls.T[1][3] 0.0007 _pdbx_refine_tls.T[2][3] 0.0043 _pdbx_refine_tls.L[1][1] 1.4270 _pdbx_refine_tls.L[2][2] 1.1666 _pdbx_refine_tls.L[3][3] 1.6160 _pdbx_refine_tls.L[1][2] 0.1394 _pdbx_refine_tls.L[1][3] -0.1402 _pdbx_refine_tls.L[2][3] 0.1229 _pdbx_refine_tls.S[1][1] 0.0156 _pdbx_refine_tls.S[2][2] -0.0078 _pdbx_refine_tls.S[3][3] -0.0078 _pdbx_refine_tls.S[1][2] -0.0880 _pdbx_refine_tls.S[1][3] 0.0056 _pdbx_refine_tls.S[2][3] 0.0484 _pdbx_refine_tls.S[2][1] 0.0803 _pdbx_refine_tls.S[3][1] -0.0213 _pdbx_refine_tls.S[3][2] 0.0573 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 34 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 264 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 25 ? A ASP 1 2 1 Y 1 A LYS 26 ? A LYS 2 3 1 Y 1 A ARG 27 ? A ARG 3 4 1 Y 1 A LEU 28 ? A LEU 4 5 1 Y 1 A ARG 29 ? A ARG 5 6 1 Y 1 A ASP 30 ? A ASP 6 7 1 Y 1 A ASN 31 ? A ASN 7 8 1 Y 1 A HIS 32 ? A HIS 8 9 1 Y 1 A GLU 33 ? A GLU 9 10 1 Y 1 A GLN 189 ? A GLN 165 11 1 Y 1 A ASP 190 ? A ASP 166 12 1 Y 1 A GLU 191 ? A GLU 167 13 1 Y 1 A GLU 215 ? A GLU 191 14 1 Y 1 A PRO 216 ? A PRO 192 15 1 Y 1 A GLY 217 ? A GLY 193 16 1 Y 1 A GLU 218 ? A GLU 194 17 1 Y 1 A GLN 219 ? A GLN 195 18 1 Y 1 A PRO 220 ? A PRO 196 19 1 Y 1 A SER 221 ? A SER 197 20 1 Y 1 A PRO 222 ? A PRO 198 21 1 Y 1 A LYS 223 ? A LYS 199 22 1 Y 1 A GLN 224 ? A GLN 200 23 1 Y 1 A GLU 225 ? A GLU 201 24 1 Y 1 A VAL 226 ? A VAL 202 25 1 Y 1 A TRP 227 ? A TRP 203 26 1 Y 1 A LEU 228 ? A LEU 204 27 1 Y 1 A ALA 229 ? A ALA 205 28 1 Y 1 A ASN 230 ? A ASN 206 29 1 Y 1 A GLY 231 ? A GLY 207 30 1 Y 1 A ALA 232 ? A ALA 208 31 1 Y 1 A ALA 233 ? A ALA 209 32 1 Y 1 A GLU 234 ? A GLU 210 33 1 Y 1 A LYS 253 ? A LYS 229 34 1 Y 1 A THR 254 ? A THR 230 35 1 Y 1 A LYS 255 ? A LYS 231 36 1 Y 1 A HIS 256 ? A HIS 232 37 1 Y 1 A HIS 257 ? A HIS 233 38 1 Y 1 A HIS 258 ? A HIS 234 39 1 Y 1 A HIS 259 ? A HIS 235 40 1 Y 1 A HIS 260 ? A HIS 236 41 1 Y 1 A HIS 261 ? A HIS 237 42 1 Y 1 A HIS 262 ? A HIS 238 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 NAG C1 C N R 250 NAG C2 C N R 251 NAG C3 C N R 252 NAG C4 C N S 253 NAG C5 C N R 254 NAG C6 C N N 255 NAG C7 C N N 256 NAG C8 C N N 257 NAG N2 N N N 258 NAG O1 O N N 259 NAG O3 O N N 260 NAG O4 O N N 261 NAG O5 O N N 262 NAG O6 O N N 263 NAG O7 O N N 264 NAG H1 H N N 265 NAG H2 H N N 266 NAG H3 H N N 267 NAG H4 H N N 268 NAG H5 H N N 269 NAG H61 H N N 270 NAG H62 H N N 271 NAG H81 H N N 272 NAG H82 H N N 273 NAG H83 H N N 274 NAG HN2 H N N 275 NAG HO1 H N N 276 NAG HO3 H N N 277 NAG HO4 H N N 278 NAG HO6 H N N 279 PHE N N N N 280 PHE CA C N S 281 PHE C C N N 282 PHE O O N N 283 PHE CB C N N 284 PHE CG C Y N 285 PHE CD1 C Y N 286 PHE CD2 C Y N 287 PHE CE1 C Y N 288 PHE CE2 C Y N 289 PHE CZ C Y N 290 PHE OXT O N N 291 PHE H H N N 292 PHE H2 H N N 293 PHE HA H N N 294 PHE HB2 H N N 295 PHE HB3 H N N 296 PHE HD1 H N N 297 PHE HD2 H N N 298 PHE HE1 H N N 299 PHE HE2 H N N 300 PHE HZ H N N 301 PHE HXT H N N 302 PRO N N N N 303 PRO CA C N S 304 PRO C C N N 305 PRO O O N N 306 PRO CB C N N 307 PRO CG C N N 308 PRO CD C N N 309 PRO OXT O N N 310 PRO H H N N 311 PRO HA H N N 312 PRO HB2 H N N 313 PRO HB3 H N N 314 PRO HG2 H N N 315 PRO HG3 H N N 316 PRO HD2 H N N 317 PRO HD3 H N N 318 PRO HXT H N N 319 SER N N N N 320 SER CA C N S 321 SER C C N N 322 SER O O N N 323 SER CB C N N 324 SER OG O N N 325 SER OXT O N N 326 SER H H N N 327 SER H2 H N N 328 SER HA H N N 329 SER HB2 H N N 330 SER HB3 H N N 331 SER HG H N N 332 SER HXT H N N 333 THR N N N N 334 THR CA C N S 335 THR C C N N 336 THR O O N N 337 THR CB C N R 338 THR OG1 O N N 339 THR CG2 C N N 340 THR OXT O N N 341 THR H H N N 342 THR H2 H N N 343 THR HA H N N 344 THR HB H N N 345 THR HG1 H N N 346 THR HG21 H N N 347 THR HG22 H N N 348 THR HG23 H N N 349 THR HXT H N N 350 TRP N N N N 351 TRP CA C N S 352 TRP C C N N 353 TRP O O N N 354 TRP CB C N N 355 TRP CG C Y N 356 TRP CD1 C Y N 357 TRP CD2 C Y N 358 TRP NE1 N Y N 359 TRP CE2 C Y N 360 TRP CE3 C Y N 361 TRP CZ2 C Y N 362 TRP CZ3 C Y N 363 TRP CH2 C Y N 364 TRP OXT O N N 365 TRP H H N N 366 TRP H2 H N N 367 TRP HA H N N 368 TRP HB2 H N N 369 TRP HB3 H N N 370 TRP HD1 H N N 371 TRP HE1 H N N 372 TRP HE3 H N N 373 TRP HZ2 H N N 374 TRP HZ3 H N N 375 TRP HH2 H N N 376 TRP HXT H N N 377 TYR N N N N 378 TYR CA C N S 379 TYR C C N N 380 TYR O O N N 381 TYR CB C N N 382 TYR CG C Y N 383 TYR CD1 C Y N 384 TYR CD2 C Y N 385 TYR CE1 C Y N 386 TYR CE2 C Y N 387 TYR CZ C Y N 388 TYR OH O N N 389 TYR OXT O N N 390 TYR H H N N 391 TYR H2 H N N 392 TYR HA H N N 393 TYR HB2 H N N 394 TYR HB3 H N N 395 TYR HD1 H N N 396 TYR HD2 H N N 397 TYR HE1 H N N 398 TYR HE2 H N N 399 TYR HH H N N 400 TYR HXT H N N 401 VAL N N N N 402 VAL CA C N S 403 VAL C C N N 404 VAL O O N N 405 VAL CB C N N 406 VAL CG1 C N N 407 VAL CG2 C N N 408 VAL OXT O N N 409 VAL H H N N 410 VAL H2 H N N 411 VAL HA H N N 412 VAL HB H N N 413 VAL HG11 H N N 414 VAL HG12 H N N 415 VAL HG13 H N N 416 VAL HG21 H N N 417 VAL HG22 H N N 418 VAL HG23 H N N 419 VAL HXT H N N 420 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 NAG C1 C2 sing N N 237 NAG C1 O1 sing N N 238 NAG C1 O5 sing N N 239 NAG C1 H1 sing N N 240 NAG C2 C3 sing N N 241 NAG C2 N2 sing N N 242 NAG C2 H2 sing N N 243 NAG C3 C4 sing N N 244 NAG C3 O3 sing N N 245 NAG C3 H3 sing N N 246 NAG C4 C5 sing N N 247 NAG C4 O4 sing N N 248 NAG C4 H4 sing N N 249 NAG C5 C6 sing N N 250 NAG C5 O5 sing N N 251 NAG C5 H5 sing N N 252 NAG C6 O6 sing N N 253 NAG C6 H61 sing N N 254 NAG C6 H62 sing N N 255 NAG C7 C8 sing N N 256 NAG C7 N2 sing N N 257 NAG C7 O7 doub N N 258 NAG C8 H81 sing N N 259 NAG C8 H82 sing N N 260 NAG C8 H83 sing N N 261 NAG N2 HN2 sing N N 262 NAG O1 HO1 sing N N 263 NAG O3 HO3 sing N N 264 NAG O4 HO4 sing N N 265 NAG O6 HO6 sing N N 266 PHE N CA sing N N 267 PHE N H sing N N 268 PHE N H2 sing N N 269 PHE CA C sing N N 270 PHE CA CB sing N N 271 PHE CA HA sing N N 272 PHE C O doub N N 273 PHE C OXT sing N N 274 PHE CB CG sing N N 275 PHE CB HB2 sing N N 276 PHE CB HB3 sing N N 277 PHE CG CD1 doub Y N 278 PHE CG CD2 sing Y N 279 PHE CD1 CE1 sing Y N 280 PHE CD1 HD1 sing N N 281 PHE CD2 CE2 doub Y N 282 PHE CD2 HD2 sing N N 283 PHE CE1 CZ doub Y N 284 PHE CE1 HE1 sing N N 285 PHE CE2 CZ sing Y N 286 PHE CE2 HE2 sing N N 287 PHE CZ HZ sing N N 288 PHE OXT HXT sing N N 289 PRO N CA sing N N 290 PRO N CD sing N N 291 PRO N H sing N N 292 PRO CA C sing N N 293 PRO CA CB sing N N 294 PRO CA HA sing N N 295 PRO C O doub N N 296 PRO C OXT sing N N 297 PRO CB CG sing N N 298 PRO CB HB2 sing N N 299 PRO CB HB3 sing N N 300 PRO CG CD sing N N 301 PRO CG HG2 sing N N 302 PRO CG HG3 sing N N 303 PRO CD HD2 sing N N 304 PRO CD HD3 sing N N 305 PRO OXT HXT sing N N 306 SER N CA sing N N 307 SER N H sing N N 308 SER N H2 sing N N 309 SER CA C sing N N 310 SER CA CB sing N N 311 SER CA HA sing N N 312 SER C O doub N N 313 SER C OXT sing N N 314 SER CB OG sing N N 315 SER CB HB2 sing N N 316 SER CB HB3 sing N N 317 SER OG HG sing N N 318 SER OXT HXT sing N N 319 THR N CA sing N N 320 THR N H sing N N 321 THR N H2 sing N N 322 THR CA C sing N N 323 THR CA CB sing N N 324 THR CA HA sing N N 325 THR C O doub N N 326 THR C OXT sing N N 327 THR CB OG1 sing N N 328 THR CB CG2 sing N N 329 THR CB HB sing N N 330 THR OG1 HG1 sing N N 331 THR CG2 HG21 sing N N 332 THR CG2 HG22 sing N N 333 THR CG2 HG23 sing N N 334 THR OXT HXT sing N N 335 TRP N CA sing N N 336 TRP N H sing N N 337 TRP N H2 sing N N 338 TRP CA C sing N N 339 TRP CA CB sing N N 340 TRP CA HA sing N N 341 TRP C O doub N N 342 TRP C OXT sing N N 343 TRP CB CG sing N N 344 TRP CB HB2 sing N N 345 TRP CB HB3 sing N N 346 TRP CG CD1 doub Y N 347 TRP CG CD2 sing Y N 348 TRP CD1 NE1 sing Y N 349 TRP CD1 HD1 sing N N 350 TRP CD2 CE2 doub Y N 351 TRP CD2 CE3 sing Y N 352 TRP NE1 CE2 sing Y N 353 TRP NE1 HE1 sing N N 354 TRP CE2 CZ2 sing Y N 355 TRP CE3 CZ3 doub Y N 356 TRP CE3 HE3 sing N N 357 TRP CZ2 CH2 doub Y N 358 TRP CZ2 HZ2 sing N N 359 TRP CZ3 CH2 sing Y N 360 TRP CZ3 HZ3 sing N N 361 TRP CH2 HH2 sing N N 362 TRP OXT HXT sing N N 363 TYR N CA sing N N 364 TYR N H sing N N 365 TYR N H2 sing N N 366 TYR CA C sing N N 367 TYR CA CB sing N N 368 TYR CA HA sing N N 369 TYR C O doub N N 370 TYR C OXT sing N N 371 TYR CB CG sing N N 372 TYR CB HB2 sing N N 373 TYR CB HB3 sing N N 374 TYR CG CD1 doub Y N 375 TYR CG CD2 sing Y N 376 TYR CD1 CE1 sing Y N 377 TYR CD1 HD1 sing N N 378 TYR CD2 CE2 doub Y N 379 TYR CD2 HD2 sing N N 380 TYR CE1 CZ doub Y N 381 TYR CE1 HE1 sing N N 382 TYR CE2 CZ sing Y N 383 TYR CE2 HE2 sing N N 384 TYR CZ OH sing N N 385 TYR OH HH sing N N 386 TYR OXT HXT sing N N 387 VAL N CA sing N N 388 VAL N H sing N N 389 VAL N H2 sing N N 390 VAL CA C sing N N 391 VAL CA CB sing N N 392 VAL CA HA sing N N 393 VAL C O doub N N 394 VAL C OXT sing N N 395 VAL CB CG1 sing N N 396 VAL CB CG2 sing N N 397 VAL CB HB sing N N 398 VAL CG1 HG11 sing N N 399 VAL CG1 HG12 sing N N 400 VAL CG1 HG13 sing N N 401 VAL CG2 HG21 sing N N 402 VAL CG2 HG22 sing N N 403 VAL CG2 HG23 sing N N 404 VAL OXT HXT sing N N 405 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1DIX _pdbx_initial_refinement_model.details 'PDB ENTRY 1DIX' # _atom_sites.entry_id 3T0O _atom_sites.fract_transf_matrix[1][1] 0.032051 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000453 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014837 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020879 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_