HEADER CELL ADHESION 31-JUL-11 3T7U TITLE A NEW CRYSTAL STRUCTURE OF APC-ARM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENOMATOUS POLYPOSIS COLI PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: ARM 1-7 DOMAIN, UNP RESIDUES 407-775; COMPND 5 SYNONYM: PROTEIN APC, DELETED IN POLYPOSIS 2.5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: APC, DP2.5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS ARMADILLO REPEATS DOMAIN, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR Z.ZHANG,G.WU REVDAT 3 01-NOV-23 3T7U 1 REMARK SEQADV REVDAT 2 21-DEC-16 3T7U 1 TITLE REVDAT 1 14-DEC-11 3T7U 0 JRNL AUTH Z.ZHANG,K.LIN,L.GAO,L.CHEN,X.SHI,G.WU JRNL TITL CRYSTAL STRUCTURE OF THE ARMADILLO REPEAT DOMAIN OF JRNL TITL 2 ADENOMATOUS POLYPOSIS COLI WHICH REVEALS ITS INHERENT JRNL TITL 3 FLEXIBILITY JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 412 732 2011 JRNL REFN ISSN 0006-291X JRNL PMID 21871439 JRNL DOI 10.1016/J.BBRC.2011.08.044 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 53.8 REMARK 3 NUMBER OF REFLECTIONS : 9077 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.271 REMARK 3 R VALUE (WORKING SET) : 0.269 REMARK 3 FREE R VALUE : 0.313 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 447 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 617 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 53.02 REMARK 3 BIN R VALUE (WORKING SET) : 0.1490 REMARK 3 BIN FREE R VALUE SET COUNT : 32 REMARK 3 BIN FREE R VALUE : 0.3190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4771 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 26 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.36000 REMARK 3 B22 (A**2) : 0.36000 REMARK 3 B33 (A**2) : -0.54000 REMARK 3 B12 (A**2) : 0.18000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.845 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.189 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.870 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.874 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.857 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4823 ; 0.006 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6506 ; 0.908 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 612 ; 4.000 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 200 ;35.662 ;24.400 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 886 ;17.387 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;16.082 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 761 ; 0.057 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3488 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3065 ; 0.107 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4874 ; 0.204 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1758 ; 0.326 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1632 ; 0.532 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 407 A 733 4 REMARK 3 1 B 407 B 733 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 2324 ; 0.300 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 2324 ; 0.140 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 405 A 734 REMARK 3 ORIGIN FOR THE GROUP (A): 9.3486 15.5498 -30.3244 REMARK 3 T TENSOR REMARK 3 T11: 0.0112 T22: 0.3500 REMARK 3 T33: 0.2625 T12: -0.0046 REMARK 3 T13: -0.0063 T23: 0.0921 REMARK 3 L TENSOR REMARK 3 L11: 0.7502 L22: 2.0288 REMARK 3 L33: 5.3486 L12: 0.2452 REMARK 3 L13: -0.2809 L23: 2.0359 REMARK 3 S TENSOR REMARK 3 S11: -0.0073 S12: -0.1311 S13: 0.1367 REMARK 3 S21: -0.0358 S22: 0.0479 S23: 0.0499 REMARK 3 S31: -0.2075 S32: 0.2762 S33: -0.0406 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 405 B 734 REMARK 3 ORIGIN FOR THE GROUP (A): 17.8833 -21.1603 -12.8564 REMARK 3 T TENSOR REMARK 3 T11: 0.1914 T22: 0.1168 REMARK 3 T33: 0.2814 T12: -0.1183 REMARK 3 T13: 0.0545 T23: -0.0230 REMARK 3 L TENSOR REMARK 3 L11: 2.1526 L22: 0.8978 REMARK 3 L33: 5.1374 L12: -0.7188 REMARK 3 L13: 1.8416 L23: -1.3289 REMARK 3 S TENSOR REMARK 3 S11: 0.1356 S12: -0.0446 S13: 0.0301 REMARK 3 S21: -0.2074 S22: 0.0318 S23: 0.0394 REMARK 3 S31: 0.2717 S32: -0.3209 S33: -0.1674 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 3T7U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000067146. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10096 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 20.30 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 20.70 REMARK 200 R MERGE FOR SHELL (I) : 0.55000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3NMW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.02M SODIUM PHOSPHATE MONOBASIC REMARK 280 MONOHYDRATE, 0.18M POTASSIUM PHOSPHATE DIBASIC, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.32700 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 86.65400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 398 REMARK 465 GLY A 399 REMARK 465 HIS A 400 REMARK 465 HIS A 401 REMARK 465 HIS A 402 REMARK 465 HIS A 403 REMARK 465 HIS A 404 REMARK 465 GLU A 425 REMARK 465 ALA A 426 REMARK 465 HIS A 427 REMARK 465 GLU A 428 REMARK 465 PRO A 429 REMARK 465 GLY A 430 REMARK 465 MET A 431 REMARK 465 ASP A 432 REMARK 465 GLN A 433 REMARK 465 ASP A 434 REMARK 465 LYS A 435 REMARK 465 ASN A 436 REMARK 465 PRO A 437 REMARK 465 LEU A 488 REMARK 465 THR A 489 REMARK 465 ASN A 490 REMARK 465 ASP A 491 REMARK 465 GLN A 625 REMARK 465 THR A 626 REMARK 465 ASN A 627 REMARK 465 THR A 628 REMARK 465 ALA A 735 REMARK 465 LYS A 736 REMARK 465 TYR A 737 REMARK 465 LYS A 738 REMARK 465 ASP A 739 REMARK 465 ALA A 740 REMARK 465 ASN A 741 REMARK 465 ILE A 742 REMARK 465 MET A 743 REMARK 465 SER A 744 REMARK 465 PRO A 745 REMARK 465 GLY A 746 REMARK 465 SER A 747 REMARK 465 SER A 748 REMARK 465 LEU A 749 REMARK 465 PRO A 750 REMARK 465 SER A 751 REMARK 465 LEU A 752 REMARK 465 HIS A 753 REMARK 465 VAL A 754 REMARK 465 ARG A 755 REMARK 465 LYS A 756 REMARK 465 GLN A 757 REMARK 465 LYS A 758 REMARK 465 ALA A 759 REMARK 465 LEU A 760 REMARK 465 GLU A 761 REMARK 465 ALA A 762 REMARK 465 GLU A 763 REMARK 465 LEU A 764 REMARK 465 ASP A 765 REMARK 465 ALA A 766 REMARK 465 GLN A 767 REMARK 465 HIS A 768 REMARK 465 LEU A 769 REMARK 465 SER A 770 REMARK 465 GLU A 771 REMARK 465 THR A 772 REMARK 465 PHE A 773 REMARK 465 ASP A 774 REMARK 465 ASN A 775 REMARK 465 MET B 398 REMARK 465 GLY B 399 REMARK 465 HIS B 400 REMARK 465 HIS B 401 REMARK 465 HIS B 402 REMARK 465 HIS B 403 REMARK 465 HIS B 404 REMARK 465 GLU B 425 REMARK 465 ALA B 426 REMARK 465 HIS B 427 REMARK 465 GLU B 428 REMARK 465 PRO B 429 REMARK 465 GLY B 430 REMARK 465 MET B 431 REMARK 465 ASP B 432 REMARK 465 GLN B 433 REMARK 465 ASP B 434 REMARK 465 LYS B 435 REMARK 465 ASN B 436 REMARK 465 PRO B 437 REMARK 465 THR B 489 REMARK 465 ASN B 490 REMARK 465 GLN B 625 REMARK 465 THR B 626 REMARK 465 ASN B 627 REMARK 465 THR B 628 REMARK 465 ALA B 735 REMARK 465 LYS B 736 REMARK 465 TYR B 737 REMARK 465 LYS B 738 REMARK 465 ASP B 739 REMARK 465 ALA B 740 REMARK 465 ASN B 741 REMARK 465 ILE B 742 REMARK 465 MET B 743 REMARK 465 SER B 744 REMARK 465 PRO B 745 REMARK 465 GLY B 746 REMARK 465 SER B 747 REMARK 465 SER B 748 REMARK 465 LEU B 749 REMARK 465 PRO B 750 REMARK 465 SER B 751 REMARK 465 LEU B 752 REMARK 465 HIS B 753 REMARK 465 VAL B 754 REMARK 465 ARG B 755 REMARK 465 LYS B 756 REMARK 465 GLN B 757 REMARK 465 LYS B 758 REMARK 465 ALA B 759 REMARK 465 LEU B 760 REMARK 465 GLU B 761 REMARK 465 ALA B 762 REMARK 465 GLU B 763 REMARK 465 LEU B 764 REMARK 465 ASP B 765 REMARK 465 ALA B 766 REMARK 465 GLN B 767 REMARK 465 HIS B 768 REMARK 465 LEU B 769 REMARK 465 SER B 770 REMARK 465 GLU B 771 REMARK 465 THR B 772 REMARK 465 PHE B 773 REMARK 465 ASP B 774 REMARK 465 ASN B 775 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 629 CG CD1 CD2 REMARK 470 PRO A 734 CG CD REMARK 470 LEU B 488 CG CD1 CD2 REMARK 470 ASP B 491 CG OD1 OD2 REMARK 470 SER B 624 OG REMARK 470 LEU B 629 CG CD1 CD2 REMARK 470 PRO B 734 CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 734 N - CA - CB ANGL. DEV. = 7.4 DEGREES REMARK 500 PRO B 734 N - CA - CB ANGL. DEV. = 7.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 510 108.37 -54.21 REMARK 500 ASN B 691 107.56 -164.12 REMARK 500 HIS B 712 47.56 -92.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 2 DBREF 3T7U A 407 775 UNP P25054 APC_HUMAN 407 775 DBREF 3T7U B 407 775 UNP P25054 APC_HUMAN 407 775 SEQADV 3T7U MET A 398 UNP P25054 EXPRESSION TAG SEQADV 3T7U GLY A 399 UNP P25054 EXPRESSION TAG SEQADV 3T7U HIS A 400 UNP P25054 EXPRESSION TAG SEQADV 3T7U HIS A 401 UNP P25054 EXPRESSION TAG SEQADV 3T7U HIS A 402 UNP P25054 EXPRESSION TAG SEQADV 3T7U HIS A 403 UNP P25054 EXPRESSION TAG SEQADV 3T7U HIS A 404 UNP P25054 EXPRESSION TAG SEQADV 3T7U HIS A 405 UNP P25054 EXPRESSION TAG SEQADV 3T7U MET A 406 UNP P25054 EXPRESSION TAG SEQADV 3T7U MET B 398 UNP P25054 EXPRESSION TAG SEQADV 3T7U GLY B 399 UNP P25054 EXPRESSION TAG SEQADV 3T7U HIS B 400 UNP P25054 EXPRESSION TAG SEQADV 3T7U HIS B 401 UNP P25054 EXPRESSION TAG SEQADV 3T7U HIS B 402 UNP P25054 EXPRESSION TAG SEQADV 3T7U HIS B 403 UNP P25054 EXPRESSION TAG SEQADV 3T7U HIS B 404 UNP P25054 EXPRESSION TAG SEQADV 3T7U HIS B 405 UNP P25054 EXPRESSION TAG SEQADV 3T7U MET B 406 UNP P25054 EXPRESSION TAG SEQRES 1 A 378 MET GLY HIS HIS HIS HIS HIS HIS MET LEU HIS LEU LEU SEQRES 2 A 378 GLU GLN ILE ARG ALA TYR CYS GLU THR CYS TRP GLU TRP SEQRES 3 A 378 GLN GLU ALA HIS GLU PRO GLY MET ASP GLN ASP LYS ASN SEQRES 4 A 378 PRO MET PRO ALA PRO VAL GLU HIS GLN ILE CYS PRO ALA SEQRES 5 A 378 VAL CYS VAL LEU MET LYS LEU SER PHE ASP GLU GLU HIS SEQRES 6 A 378 ARG HIS ALA MET ASN GLU LEU GLY GLY LEU GLN ALA ILE SEQRES 7 A 378 ALA GLU LEU LEU GLN VAL ASP CYS GLU MET TYR GLY LEU SEQRES 8 A 378 THR ASN ASP HIS TYR SER ILE THR LEU ARG ARG TYR ALA SEQRES 9 A 378 GLY MET ALA LEU THR ASN LEU THR PHE GLY ASP VAL ALA SEQRES 10 A 378 ASN LYS ALA THR LEU CYS SER MET LYS GLY CYS MET ARG SEQRES 11 A 378 ALA LEU VAL ALA GLN LEU LYS SER GLU SER GLU ASP LEU SEQRES 12 A 378 GLN GLN VAL ILE ALA SER VAL LEU ARG ASN LEU SER TRP SEQRES 13 A 378 ARG ALA ASP VAL ASN SER LYS LYS THR LEU ARG GLU VAL SEQRES 14 A 378 GLY SER VAL LYS ALA LEU MET GLU CYS ALA LEU GLU VAL SEQRES 15 A 378 LYS LYS GLU SER THR LEU LYS SER VAL LEU SER ALA LEU SEQRES 16 A 378 TRP ASN LEU SER ALA HIS CYS THR GLU ASN LYS ALA ASP SEQRES 17 A 378 ILE CYS ALA VAL ASP GLY ALA LEU ALA PHE LEU VAL GLY SEQRES 18 A 378 THR LEU THR TYR ARG SER GLN THR ASN THR LEU ALA ILE SEQRES 19 A 378 ILE GLU SER GLY GLY GLY ILE LEU ARG ASN VAL SER SER SEQRES 20 A 378 LEU ILE ALA THR ASN GLU ASP HIS ARG GLN ILE LEU ARG SEQRES 21 A 378 GLU ASN ASN CYS LEU GLN THR LEU LEU GLN HIS LEU LYS SEQRES 22 A 378 SER HIS SER LEU THR ILE VAL SER ASN ALA CYS GLY THR SEQRES 23 A 378 LEU TRP ASN LEU SER ALA ARG ASN PRO LYS ASP GLN GLU SEQRES 24 A 378 ALA LEU TRP ASP MET GLY ALA VAL SER MET LEU LYS ASN SEQRES 25 A 378 LEU ILE HIS SER LYS HIS LYS MET ILE ALA MET GLY SER SEQRES 26 A 378 ALA ALA ALA LEU ARG ASN LEU MET ALA ASN ARG PRO ALA SEQRES 27 A 378 LYS TYR LYS ASP ALA ASN ILE MET SER PRO GLY SER SER SEQRES 28 A 378 LEU PRO SER LEU HIS VAL ARG LYS GLN LYS ALA LEU GLU SEQRES 29 A 378 ALA GLU LEU ASP ALA GLN HIS LEU SER GLU THR PHE ASP SEQRES 30 A 378 ASN SEQRES 1 B 378 MET GLY HIS HIS HIS HIS HIS HIS MET LEU HIS LEU LEU SEQRES 2 B 378 GLU GLN ILE ARG ALA TYR CYS GLU THR CYS TRP GLU TRP SEQRES 3 B 378 GLN GLU ALA HIS GLU PRO GLY MET ASP GLN ASP LYS ASN SEQRES 4 B 378 PRO MET PRO ALA PRO VAL GLU HIS GLN ILE CYS PRO ALA SEQRES 5 B 378 VAL CYS VAL LEU MET LYS LEU SER PHE ASP GLU GLU HIS SEQRES 6 B 378 ARG HIS ALA MET ASN GLU LEU GLY GLY LEU GLN ALA ILE SEQRES 7 B 378 ALA GLU LEU LEU GLN VAL ASP CYS GLU MET TYR GLY LEU SEQRES 8 B 378 THR ASN ASP HIS TYR SER ILE THR LEU ARG ARG TYR ALA SEQRES 9 B 378 GLY MET ALA LEU THR ASN LEU THR PHE GLY ASP VAL ALA SEQRES 10 B 378 ASN LYS ALA THR LEU CYS SER MET LYS GLY CYS MET ARG SEQRES 11 B 378 ALA LEU VAL ALA GLN LEU LYS SER GLU SER GLU ASP LEU SEQRES 12 B 378 GLN GLN VAL ILE ALA SER VAL LEU ARG ASN LEU SER TRP SEQRES 13 B 378 ARG ALA ASP VAL ASN SER LYS LYS THR LEU ARG GLU VAL SEQRES 14 B 378 GLY SER VAL LYS ALA LEU MET GLU CYS ALA LEU GLU VAL SEQRES 15 B 378 LYS LYS GLU SER THR LEU LYS SER VAL LEU SER ALA LEU SEQRES 16 B 378 TRP ASN LEU SER ALA HIS CYS THR GLU ASN LYS ALA ASP SEQRES 17 B 378 ILE CYS ALA VAL ASP GLY ALA LEU ALA PHE LEU VAL GLY SEQRES 18 B 378 THR LEU THR TYR ARG SER GLN THR ASN THR LEU ALA ILE SEQRES 19 B 378 ILE GLU SER GLY GLY GLY ILE LEU ARG ASN VAL SER SER SEQRES 20 B 378 LEU ILE ALA THR ASN GLU ASP HIS ARG GLN ILE LEU ARG SEQRES 21 B 378 GLU ASN ASN CYS LEU GLN THR LEU LEU GLN HIS LEU LYS SEQRES 22 B 378 SER HIS SER LEU THR ILE VAL SER ASN ALA CYS GLY THR SEQRES 23 B 378 LEU TRP ASN LEU SER ALA ARG ASN PRO LYS ASP GLN GLU SEQRES 24 B 378 ALA LEU TRP ASP MET GLY ALA VAL SER MET LEU LYS ASN SEQRES 25 B 378 LEU ILE HIS SER LYS HIS LYS MET ILE ALA MET GLY SER SEQRES 26 B 378 ALA ALA ALA LEU ARG ASN LEU MET ALA ASN ARG PRO ALA SEQRES 27 B 378 LYS TYR LYS ASP ALA ASN ILE MET SER PRO GLY SER SER SEQRES 28 B 378 LEU PRO SER LEU HIS VAL ARG LYS GLN LYS ALA LEU GLU SEQRES 29 B 378 ALA GLU LEU ASP ALA GLN HIS LEU SER GLU THR PHE ASP SEQRES 30 B 378 ASN HET PO4 A 1 5 HET PO4 A 2 5 HETNAM PO4 PHOSPHATE ION FORMUL 3 PO4 2(O4 P 3-) FORMUL 5 HOH *26(H2 O) HELIX 1 1 HIS A 405 GLU A 422 1 18 HELIX 2 2 ALA A 440 HIS A 444 5 5 HELIX 3 3 GLN A 445 SER A 457 1 13 HELIX 4 4 ASP A 459 LEU A 469 1 11 HELIX 5 5 GLY A 470 TYR A 486 1 17 HELIX 6 6 TYR A 493 PHE A 510 1 18 HELIX 7 7 ASP A 512 MET A 522 1 11 HELIX 8 8 MET A 522 GLN A 532 1 11 HELIX 9 9 LEU A 533 SER A 535 5 3 HELIX 10 10 SER A 537 TRP A 553 1 17 HELIX 11 11 ASP A 556 VAL A 566 1 11 HELIX 12 12 GLY A 567 VAL A 579 1 13 HELIX 13 13 LYS A 581 CYS A 599 1 19 HELIX 14 14 CYS A 599 VAL A 609 1 11 HELIX 15 15 GLY A 611 THR A 619 1 9 HELIX 16 16 LEU A 620 TYR A 622 5 3 HELIX 17 17 ALA A 630 ALA A 647 1 18 HELIX 18 18 ASN A 649 ASN A 659 1 11 HELIX 19 19 ASN A 660 LEU A 669 1 10 HELIX 20 20 SER A 673 SER A 688 1 16 HELIX 21 21 ASN A 691 GLY A 702 1 12 HELIX 22 22 GLY A 702 ASN A 709 1 8 HELIX 23 23 HIS A 715 ALA A 731 1 17 HELIX 24 24 MET B 406 GLN B 424 1 19 HELIX 25 25 GLN B 445 SER B 457 1 13 HELIX 26 26 ASP B 459 LEU B 469 1 11 HELIX 27 27 GLY B 470 GLY B 487 1 18 HELIX 28 28 HIS B 492 PHE B 510 1 19 HELIX 29 29 ASP B 512 SER B 521 1 10 HELIX 30 30 MET B 522 GLN B 532 1 11 HELIX 31 31 LEU B 533 SER B 535 5 3 HELIX 32 32 SER B 537 TRP B 553 1 17 HELIX 33 33 ASP B 556 VAL B 566 1 11 HELIX 34 34 GLY B 567 VAL B 579 1 13 HELIX 35 35 LYS B 581 ALA B 597 1 17 HELIX 36 36 CYS B 599 VAL B 609 1 11 HELIX 37 37 GLY B 611 LEU B 620 1 10 HELIX 38 38 ALA B 630 ALA B 647 1 18 HELIX 39 39 ASN B 649 GLU B 658 1 10 HELIX 40 40 ASN B 660 LEU B 669 1 10 HELIX 41 41 SER B 673 LEU B 687 1 15 HELIX 42 42 ASN B 691 GLY B 702 1 12 HELIX 43 43 GLY B 702 ASN B 709 1 8 HELIX 44 44 HIS B 715 ASN B 732 1 18 SITE 1 AC1 8 LYS A 714 HIS A 715 LYS A 716 GLN B 480 SITE 2 AC1 8 MET B 522 LYS B 523 GLY B 524 CYS B 525 SITE 1 AC2 8 GLN A 480 MET A 522 LYS A 523 GLY A 524 SITE 2 AC2 8 CYS A 525 LYS B 714 HIS B 715 LYS B 716 CRYST1 72.496 72.496 129.981 90.00 90.00 120.00 P 31 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013794 0.007964 0.000000 0.00000 SCALE2 0.000000 0.015928 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007693 0.00000