data_3TD9 # _entry.id 3TD9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3TD9 pdb_00003td9 10.2210/pdb3td9/pdb RCSB RCSB067339 ? ? WWPDB D_1000067339 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-09-07 2 'Structure model' 1 1 2011-09-21 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2018-01-24 5 'Structure model' 1 4 2024-11-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' citation_author 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' pdbx_entry_details 7 5 'Structure model' pdbx_modification_feature 8 5 'Structure model' struct_conn 9 5 'Structure model' struct_ref_seq_dif 10 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_citation_author.name' 4 5 'Structure model' '_database_2.pdbx_DOI' 5 5 'Structure model' '_database_2.pdbx_database_accession' 6 5 'Structure model' '_pdbx_entry_details.has_protein_modification' 7 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 8 5 'Structure model' '_struct_ref_seq_dif.details' 9 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 10 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 11 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3TD9 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-08-10 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 420134 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a Leucine binding protein LivK (TM1135) from Thermotoga maritima MSB8 at 1.90 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Branched chain amino acid ABC transporter, periplasmic amino acid-binding protein' 40338.684 1 ? ? 'UNP residues 21-370' ? 2 non-polymer syn PHENYLALANINE 165.189 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 11 ? ? ? ? 5 water nat water 18.015 262 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSDKIHHHHHH(MSE)RKVVKIAVILP(MSE)TGGISAFGR(MSE)VWEGIQIAHEEKPTVLGEEVELVLLDTRS EKTEAANAAARAIDKEKVLAIIGEVASAHSLAIAPIAEENKVP(MSE)VTPASTNPLVTQGRKFVSRVCFIDPFQGAA (MSE)AVFAYKNLGAKRVVVFTDVEQDYSVGLSNFFINKFTELGGQVKRVFFRSGDQDFSAQLSVA(MSE)SFNPDAIYI TGYYPEIALISRQARQLGFTGYILAGDGADAPELIEIGGEAVEGLLFTTHYHPKAASNPVAKKFVEVYKEKYGKEPAALN ALGYDAY(MSE)VLLDAIERAGSFDREKIAEEIRKTRNFNGASGIINIDENGDAIKSVVVNIVKNGSVDFEAVINPDDLK ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSDKIHHHHHHMRKVVKIAVILPMTGGISAFGRMVWEGIQIAHEEKPTVLGEEVELVLLDTRSEKTEAANAAARAIDKE KVLAIIGEVASAHSLAIAPIAEENKVPMVTPASTNPLVTQGRKFVSRVCFIDPFQGAAMAVFAYKNLGAKRVVVFTDVEQ DYSVGLSNFFINKFTELGGQVKRVFFRSGDQDFSAQLSVAMSFNPDAIYITGYYPEIALISRQARQLGFTGYILAGDGAD APELIEIGGEAVEGLLFTTHYHPKAASNPVAKKFVEVYKEKYGKEPAALNALGYDAYMVLLDAIERAGSFDREKIAEEIR KTRNFNGASGIINIDENGDAIKSVVVNIVKNGSVDFEAVINPDDLK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 420134 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 PHENYLALANINE PHE 3 'SULFATE ION' SO4 4 1,2-ETHANEDIOL EDO 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 ASP n 1 5 LYS n 1 6 ILE n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 MSE n 1 14 ARG n 1 15 LYS n 1 16 VAL n 1 17 VAL n 1 18 LYS n 1 19 ILE n 1 20 ALA n 1 21 VAL n 1 22 ILE n 1 23 LEU n 1 24 PRO n 1 25 MSE n 1 26 THR n 1 27 GLY n 1 28 GLY n 1 29 ILE n 1 30 SER n 1 31 ALA n 1 32 PHE n 1 33 GLY n 1 34 ARG n 1 35 MSE n 1 36 VAL n 1 37 TRP n 1 38 GLU n 1 39 GLY n 1 40 ILE n 1 41 GLN n 1 42 ILE n 1 43 ALA n 1 44 HIS n 1 45 GLU n 1 46 GLU n 1 47 LYS n 1 48 PRO n 1 49 THR n 1 50 VAL n 1 51 LEU n 1 52 GLY n 1 53 GLU n 1 54 GLU n 1 55 VAL n 1 56 GLU n 1 57 LEU n 1 58 VAL n 1 59 LEU n 1 60 LEU n 1 61 ASP n 1 62 THR n 1 63 ARG n 1 64 SER n 1 65 GLU n 1 66 LYS n 1 67 THR n 1 68 GLU n 1 69 ALA n 1 70 ALA n 1 71 ASN n 1 72 ALA n 1 73 ALA n 1 74 ALA n 1 75 ARG n 1 76 ALA n 1 77 ILE n 1 78 ASP n 1 79 LYS n 1 80 GLU n 1 81 LYS n 1 82 VAL n 1 83 LEU n 1 84 ALA n 1 85 ILE n 1 86 ILE n 1 87 GLY n 1 88 GLU n 1 89 VAL n 1 90 ALA n 1 91 SER n 1 92 ALA n 1 93 HIS n 1 94 SER n 1 95 LEU n 1 96 ALA n 1 97 ILE n 1 98 ALA n 1 99 PRO n 1 100 ILE n 1 101 ALA n 1 102 GLU n 1 103 GLU n 1 104 ASN n 1 105 LYS n 1 106 VAL n 1 107 PRO n 1 108 MSE n 1 109 VAL n 1 110 THR n 1 111 PRO n 1 112 ALA n 1 113 SER n 1 114 THR n 1 115 ASN n 1 116 PRO n 1 117 LEU n 1 118 VAL n 1 119 THR n 1 120 GLN n 1 121 GLY n 1 122 ARG n 1 123 LYS n 1 124 PHE n 1 125 VAL n 1 126 SER n 1 127 ARG n 1 128 VAL n 1 129 CYS n 1 130 PHE n 1 131 ILE n 1 132 ASP n 1 133 PRO n 1 134 PHE n 1 135 GLN n 1 136 GLY n 1 137 ALA n 1 138 ALA n 1 139 MSE n 1 140 ALA n 1 141 VAL n 1 142 PHE n 1 143 ALA n 1 144 TYR n 1 145 LYS n 1 146 ASN n 1 147 LEU n 1 148 GLY n 1 149 ALA n 1 150 LYS n 1 151 ARG n 1 152 VAL n 1 153 VAL n 1 154 VAL n 1 155 PHE n 1 156 THR n 1 157 ASP n 1 158 VAL n 1 159 GLU n 1 160 GLN n 1 161 ASP n 1 162 TYR n 1 163 SER n 1 164 VAL n 1 165 GLY n 1 166 LEU n 1 167 SER n 1 168 ASN n 1 169 PHE n 1 170 PHE n 1 171 ILE n 1 172 ASN n 1 173 LYS n 1 174 PHE n 1 175 THR n 1 176 GLU n 1 177 LEU n 1 178 GLY n 1 179 GLY n 1 180 GLN n 1 181 VAL n 1 182 LYS n 1 183 ARG n 1 184 VAL n 1 185 PHE n 1 186 PHE n 1 187 ARG n 1 188 SER n 1 189 GLY n 1 190 ASP n 1 191 GLN n 1 192 ASP n 1 193 PHE n 1 194 SER n 1 195 ALA n 1 196 GLN n 1 197 LEU n 1 198 SER n 1 199 VAL n 1 200 ALA n 1 201 MSE n 1 202 SER n 1 203 PHE n 1 204 ASN n 1 205 PRO n 1 206 ASP n 1 207 ALA n 1 208 ILE n 1 209 TYR n 1 210 ILE n 1 211 THR n 1 212 GLY n 1 213 TYR n 1 214 TYR n 1 215 PRO n 1 216 GLU n 1 217 ILE n 1 218 ALA n 1 219 LEU n 1 220 ILE n 1 221 SER n 1 222 ARG n 1 223 GLN n 1 224 ALA n 1 225 ARG n 1 226 GLN n 1 227 LEU n 1 228 GLY n 1 229 PHE n 1 230 THR n 1 231 GLY n 1 232 TYR n 1 233 ILE n 1 234 LEU n 1 235 ALA n 1 236 GLY n 1 237 ASP n 1 238 GLY n 1 239 ALA n 1 240 ASP n 1 241 ALA n 1 242 PRO n 1 243 GLU n 1 244 LEU n 1 245 ILE n 1 246 GLU n 1 247 ILE n 1 248 GLY n 1 249 GLY n 1 250 GLU n 1 251 ALA n 1 252 VAL n 1 253 GLU n 1 254 GLY n 1 255 LEU n 1 256 LEU n 1 257 PHE n 1 258 THR n 1 259 THR n 1 260 HIS n 1 261 TYR n 1 262 HIS n 1 263 PRO n 1 264 LYS n 1 265 ALA n 1 266 ALA n 1 267 SER n 1 268 ASN n 1 269 PRO n 1 270 VAL n 1 271 ALA n 1 272 LYS n 1 273 LYS n 1 274 PHE n 1 275 VAL n 1 276 GLU n 1 277 VAL n 1 278 TYR n 1 279 LYS n 1 280 GLU n 1 281 LYS n 1 282 TYR n 1 283 GLY n 1 284 LYS n 1 285 GLU n 1 286 PRO n 1 287 ALA n 1 288 ALA n 1 289 LEU n 1 290 ASN n 1 291 ALA n 1 292 LEU n 1 293 GLY n 1 294 TYR n 1 295 ASP n 1 296 ALA n 1 297 TYR n 1 298 MSE n 1 299 VAL n 1 300 LEU n 1 301 LEU n 1 302 ASP n 1 303 ALA n 1 304 ILE n 1 305 GLU n 1 306 ARG n 1 307 ALA n 1 308 GLY n 1 309 SER n 1 310 PHE n 1 311 ASP n 1 312 ARG n 1 313 GLU n 1 314 LYS n 1 315 ILE n 1 316 ALA n 1 317 GLU n 1 318 GLU n 1 319 ILE n 1 320 ARG n 1 321 LYS n 1 322 THR n 1 323 ARG n 1 324 ASN n 1 325 PHE n 1 326 ASN n 1 327 GLY n 1 328 ALA n 1 329 SER n 1 330 GLY n 1 331 ILE n 1 332 ILE n 1 333 ASN n 1 334 ILE n 1 335 ASP n 1 336 GLU n 1 337 ASN n 1 338 GLY n 1 339 ASP n 1 340 ALA n 1 341 ILE n 1 342 LYS n 1 343 SER n 1 344 VAL n 1 345 VAL n 1 346 VAL n 1 347 ASN n 1 348 ILE n 1 349 VAL n 1 350 LYS n 1 351 ASN n 1 352 GLY n 1 353 SER n 1 354 VAL n 1 355 ASP n 1 356 PHE n 1 357 GLU n 1 358 ALA n 1 359 VAL n 1 360 ILE n 1 361 ASN n 1 362 PRO n 1 363 ASP n 1 364 ASP n 1 365 LEU n 1 366 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'TM1135, TM_1135' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermotoga maritima' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2336 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name MH2T7a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -11 ? ? ? A . n A 1 2 GLY 2 -10 ? ? ? A . n A 1 3 SER 3 -9 ? ? ? A . n A 1 4 ASP 4 -8 ? ? ? A . n A 1 5 LYS 5 -7 ? ? ? A . n A 1 6 ILE 6 -6 ? ? ? A . n A 1 7 HIS 7 -5 ? ? ? A . n A 1 8 HIS 8 -4 ? ? ? A . n A 1 9 HIS 9 -3 ? ? ? A . n A 1 10 HIS 10 -2 ? ? ? A . n A 1 11 HIS 11 -1 ? ? ? A . n A 1 12 HIS 12 0 ? ? ? A . n A 1 13 MSE 13 1 ? ? ? A . n A 1 14 ARG 14 2 ? ? ? A . n A 1 15 LYS 15 3 ? ? ? A . n A 1 16 VAL 16 4 4 VAL VAL A . n A 1 17 VAL 17 21 21 VAL VAL A . n A 1 18 LYS 18 22 22 LYS LYS A . n A 1 19 ILE 19 23 23 ILE ILE A . n A 1 20 ALA 20 24 24 ALA ALA A . n A 1 21 VAL 21 25 25 VAL VAL A . n A 1 22 ILE 22 26 26 ILE ILE A . n A 1 23 LEU 23 27 27 LEU LEU A . n A 1 24 PRO 24 28 28 PRO PRO A . n A 1 25 MSE 25 29 29 MSE MSE A . n A 1 26 THR 26 30 30 THR THR A . n A 1 27 GLY 27 31 31 GLY GLY A . n A 1 28 GLY 28 32 32 GLY GLY A . n A 1 29 ILE 29 33 33 ILE ILE A . n A 1 30 SER 30 34 34 SER SER A . n A 1 31 ALA 31 35 35 ALA ALA A . n A 1 32 PHE 32 36 36 PHE PHE A . n A 1 33 GLY 33 37 37 GLY GLY A . n A 1 34 ARG 34 38 38 ARG ARG A . n A 1 35 MSE 35 39 39 MSE MSE A . n A 1 36 VAL 36 40 40 VAL VAL A . n A 1 37 TRP 37 41 41 TRP TRP A . n A 1 38 GLU 38 42 42 GLU GLU A . n A 1 39 GLY 39 43 43 GLY GLY A . n A 1 40 ILE 40 44 44 ILE ILE A . n A 1 41 GLN 41 45 45 GLN GLN A . n A 1 42 ILE 42 46 46 ILE ILE A . n A 1 43 ALA 43 47 47 ALA ALA A . n A 1 44 HIS 44 48 48 HIS HIS A . n A 1 45 GLU 45 49 49 GLU GLU A . n A 1 46 GLU 46 50 50 GLU GLU A . n A 1 47 LYS 47 51 51 LYS LYS A . n A 1 48 PRO 48 52 52 PRO PRO A . n A 1 49 THR 49 53 53 THR THR A . n A 1 50 VAL 50 54 54 VAL VAL A . n A 1 51 LEU 51 55 55 LEU LEU A . n A 1 52 GLY 52 56 56 GLY GLY A . n A 1 53 GLU 53 57 57 GLU GLU A . n A 1 54 GLU 54 58 58 GLU GLU A . n A 1 55 VAL 55 59 59 VAL VAL A . n A 1 56 GLU 56 60 60 GLU GLU A . n A 1 57 LEU 57 61 61 LEU LEU A . n A 1 58 VAL 58 62 62 VAL VAL A . n A 1 59 LEU 59 63 63 LEU LEU A . n A 1 60 LEU 60 64 64 LEU LEU A . n A 1 61 ASP 61 65 65 ASP ASP A . n A 1 62 THR 62 66 66 THR THR A . n A 1 63 ARG 63 67 67 ARG ARG A . n A 1 64 SER 64 68 68 SER SER A . n A 1 65 GLU 65 69 69 GLU GLU A . n A 1 66 LYS 66 70 70 LYS LYS A . n A 1 67 THR 67 71 71 THR THR A . n A 1 68 GLU 68 72 72 GLU GLU A . n A 1 69 ALA 69 73 73 ALA ALA A . n A 1 70 ALA 70 74 74 ALA ALA A . n A 1 71 ASN 71 75 75 ASN ASN A . n A 1 72 ALA 72 76 76 ALA ALA A . n A 1 73 ALA 73 77 77 ALA ALA A . n A 1 74 ALA 74 78 78 ALA ALA A . n A 1 75 ARG 75 79 79 ARG ARG A . n A 1 76 ALA 76 80 80 ALA ALA A . n A 1 77 ILE 77 81 81 ILE ILE A . n A 1 78 ASP 78 82 82 ASP ASP A . n A 1 79 LYS 79 83 83 LYS LYS A . n A 1 80 GLU 80 84 84 GLU GLU A . n A 1 81 LYS 81 85 85 LYS LYS A . n A 1 82 VAL 82 86 86 VAL VAL A . n A 1 83 LEU 83 87 87 LEU LEU A . n A 1 84 ALA 84 88 88 ALA ALA A . n A 1 85 ILE 85 89 89 ILE ILE A . n A 1 86 ILE 86 90 90 ILE ILE A . n A 1 87 GLY 87 91 91 GLY GLY A . n A 1 88 GLU 88 92 92 GLU GLU A . n A 1 89 VAL 89 93 93 VAL VAL A . n A 1 90 ALA 90 94 94 ALA ALA A . n A 1 91 SER 91 95 95 SER SER A . n A 1 92 ALA 92 96 96 ALA ALA A . n A 1 93 HIS 93 97 97 HIS HIS A . n A 1 94 SER 94 98 98 SER SER A . n A 1 95 LEU 95 99 99 LEU LEU A . n A 1 96 ALA 96 100 100 ALA ALA A . n A 1 97 ILE 97 101 101 ILE ILE A . n A 1 98 ALA 98 102 102 ALA ALA A . n A 1 99 PRO 99 103 103 PRO PRO A . n A 1 100 ILE 100 104 104 ILE ILE A . n A 1 101 ALA 101 105 105 ALA ALA A . n A 1 102 GLU 102 106 106 GLU GLU A . n A 1 103 GLU 103 107 107 GLU GLU A . n A 1 104 ASN 104 108 108 ASN ASN A . n A 1 105 LYS 105 109 109 LYS LYS A . n A 1 106 VAL 106 110 110 VAL VAL A . n A 1 107 PRO 107 111 111 PRO PRO A . n A 1 108 MSE 108 112 112 MSE MSE A . n A 1 109 VAL 109 113 113 VAL VAL A . n A 1 110 THR 110 114 114 THR THR A . n A 1 111 PRO 111 115 115 PRO PRO A . n A 1 112 ALA 112 116 116 ALA ALA A . n A 1 113 SER 113 117 117 SER SER A . n A 1 114 THR 114 118 118 THR THR A . n A 1 115 ASN 115 119 119 ASN ASN A . n A 1 116 PRO 116 120 120 PRO PRO A . n A 1 117 LEU 117 121 121 LEU LEU A . n A 1 118 VAL 118 122 122 VAL VAL A . n A 1 119 THR 119 123 123 THR THR A . n A 1 120 GLN 120 124 124 GLN GLN A . n A 1 121 GLY 121 125 125 GLY GLY A . n A 1 122 ARG 122 126 126 ARG ARG A . n A 1 123 LYS 123 127 127 LYS LYS A . n A 1 124 PHE 124 128 128 PHE PHE A . n A 1 125 VAL 125 129 129 VAL VAL A . n A 1 126 SER 126 130 130 SER SER A . n A 1 127 ARG 127 131 131 ARG ARG A . n A 1 128 VAL 128 132 132 VAL VAL A . n A 1 129 CYS 129 133 133 CYS CYS A . n A 1 130 PHE 130 134 134 PHE PHE A . n A 1 131 ILE 131 135 135 ILE ILE A . n A 1 132 ASP 132 136 136 ASP ASP A . n A 1 133 PRO 133 137 137 PRO PRO A . n A 1 134 PHE 134 138 138 PHE PHE A . n A 1 135 GLN 135 139 139 GLN GLN A . n A 1 136 GLY 136 140 140 GLY GLY A . n A 1 137 ALA 137 141 141 ALA ALA A . n A 1 138 ALA 138 142 142 ALA ALA A . n A 1 139 MSE 139 143 143 MSE MSE A . n A 1 140 ALA 140 144 144 ALA ALA A . n A 1 141 VAL 141 145 145 VAL VAL A . n A 1 142 PHE 142 146 146 PHE PHE A . n A 1 143 ALA 143 147 147 ALA ALA A . n A 1 144 TYR 144 148 148 TYR TYR A . n A 1 145 LYS 145 149 149 LYS LYS A . n A 1 146 ASN 146 150 150 ASN ASN A . n A 1 147 LEU 147 151 151 LEU LEU A . n A 1 148 GLY 148 152 152 GLY GLY A . n A 1 149 ALA 149 153 153 ALA ALA A . n A 1 150 LYS 150 154 154 LYS LYS A . n A 1 151 ARG 151 155 155 ARG ARG A . n A 1 152 VAL 152 156 156 VAL VAL A . n A 1 153 VAL 153 157 157 VAL VAL A . n A 1 154 VAL 154 158 158 VAL VAL A . n A 1 155 PHE 155 159 159 PHE PHE A . n A 1 156 THR 156 160 160 THR THR A . n A 1 157 ASP 157 161 161 ASP ASP A . n A 1 158 VAL 158 162 162 VAL VAL A . n A 1 159 GLU 159 163 163 GLU GLU A . n A 1 160 GLN 160 164 164 GLN GLN A . n A 1 161 ASP 161 165 165 ASP ASP A . n A 1 162 TYR 162 166 166 TYR TYR A . n A 1 163 SER 163 167 167 SER SER A . n A 1 164 VAL 164 168 168 VAL VAL A . n A 1 165 GLY 165 169 169 GLY GLY A . n A 1 166 LEU 166 170 170 LEU LEU A . n A 1 167 SER 167 171 171 SER SER A . n A 1 168 ASN 168 172 172 ASN ASN A . n A 1 169 PHE 169 173 173 PHE PHE A . n A 1 170 PHE 170 174 174 PHE PHE A . n A 1 171 ILE 171 175 175 ILE ILE A . n A 1 172 ASN 172 176 176 ASN ASN A . n A 1 173 LYS 173 177 177 LYS LYS A . n A 1 174 PHE 174 178 178 PHE PHE A . n A 1 175 THR 175 179 179 THR THR A . n A 1 176 GLU 176 180 180 GLU GLU A . n A 1 177 LEU 177 181 181 LEU LEU A . n A 1 178 GLY 178 182 182 GLY GLY A . n A 1 179 GLY 179 183 183 GLY GLY A . n A 1 180 GLN 180 184 184 GLN GLN A . n A 1 181 VAL 181 185 185 VAL VAL A . n A 1 182 LYS 182 186 186 LYS LYS A . n A 1 183 ARG 183 187 187 ARG ARG A . n A 1 184 VAL 184 188 188 VAL VAL A . n A 1 185 PHE 185 189 189 PHE PHE A . n A 1 186 PHE 186 190 190 PHE PHE A . n A 1 187 ARG 187 191 191 ARG ARG A . n A 1 188 SER 188 192 192 SER SER A . n A 1 189 GLY 189 193 193 GLY GLY A . n A 1 190 ASP 190 194 194 ASP ASP A . n A 1 191 GLN 191 195 195 GLN GLN A . n A 1 192 ASP 192 196 196 ASP ASP A . n A 1 193 PHE 193 197 197 PHE PHE A . n A 1 194 SER 194 198 198 SER SER A . n A 1 195 ALA 195 199 199 ALA ALA A . n A 1 196 GLN 196 200 200 GLN GLN A . n A 1 197 LEU 197 201 201 LEU LEU A . n A 1 198 SER 198 202 202 SER SER A . n A 1 199 VAL 199 203 203 VAL VAL A . n A 1 200 ALA 200 204 204 ALA ALA A . n A 1 201 MSE 201 205 205 MSE MSE A . n A 1 202 SER 202 206 206 SER SER A . n A 1 203 PHE 203 207 207 PHE PHE A . n A 1 204 ASN 204 208 208 ASN ASN A . n A 1 205 PRO 205 209 209 PRO PRO A . n A 1 206 ASP 206 210 210 ASP ASP A . n A 1 207 ALA 207 211 211 ALA ALA A . n A 1 208 ILE 208 212 212 ILE ILE A . n A 1 209 TYR 209 213 213 TYR TYR A . n A 1 210 ILE 210 214 214 ILE ILE A . n A 1 211 THR 211 215 215 THR THR A . n A 1 212 GLY 212 216 216 GLY GLY A . n A 1 213 TYR 213 217 217 TYR TYR A . n A 1 214 TYR 214 218 218 TYR TYR A . n A 1 215 PRO 215 219 219 PRO PRO A . n A 1 216 GLU 216 220 220 GLU GLU A . n A 1 217 ILE 217 221 221 ILE ILE A . n A 1 218 ALA 218 222 222 ALA ALA A . n A 1 219 LEU 219 223 223 LEU LEU A . n A 1 220 ILE 220 224 224 ILE ILE A . n A 1 221 SER 221 225 225 SER SER A . n A 1 222 ARG 222 226 226 ARG ARG A . n A 1 223 GLN 223 227 227 GLN GLN A . n A 1 224 ALA 224 228 228 ALA ALA A . n A 1 225 ARG 225 229 229 ARG ARG A . n A 1 226 GLN 226 230 230 GLN GLN A . n A 1 227 LEU 227 231 231 LEU LEU A . n A 1 228 GLY 228 232 232 GLY GLY A . n A 1 229 PHE 229 233 233 PHE PHE A . n A 1 230 THR 230 234 234 THR THR A . n A 1 231 GLY 231 235 235 GLY GLY A . n A 1 232 TYR 232 236 236 TYR TYR A . n A 1 233 ILE 233 237 237 ILE ILE A . n A 1 234 LEU 234 238 238 LEU LEU A . n A 1 235 ALA 235 239 239 ALA ALA A . n A 1 236 GLY 236 240 240 GLY GLY A . n A 1 237 ASP 237 241 241 ASP ASP A . n A 1 238 GLY 238 242 242 GLY GLY A . n A 1 239 ALA 239 243 243 ALA ALA A . n A 1 240 ASP 240 244 244 ASP ASP A . n A 1 241 ALA 241 245 245 ALA ALA A . n A 1 242 PRO 242 246 246 PRO PRO A . n A 1 243 GLU 243 247 247 GLU GLU A . n A 1 244 LEU 244 248 248 LEU LEU A . n A 1 245 ILE 245 249 249 ILE ILE A . n A 1 246 GLU 246 250 250 GLU GLU A . n A 1 247 ILE 247 251 251 ILE ILE A . n A 1 248 GLY 248 252 252 GLY GLY A . n A 1 249 GLY 249 253 253 GLY GLY A . n A 1 250 GLU 250 254 254 GLU GLU A . n A 1 251 ALA 251 255 255 ALA ALA A . n A 1 252 VAL 252 256 256 VAL VAL A . n A 1 253 GLU 253 257 257 GLU GLU A . n A 1 254 GLY 254 258 258 GLY GLY A . n A 1 255 LEU 255 259 259 LEU LEU A . n A 1 256 LEU 256 260 260 LEU LEU A . n A 1 257 PHE 257 261 261 PHE PHE A . n A 1 258 THR 258 262 262 THR THR A . n A 1 259 THR 259 263 263 THR THR A . n A 1 260 HIS 260 264 264 HIS HIS A . n A 1 261 TYR 261 265 265 TYR TYR A . n A 1 262 HIS 262 266 266 HIS HIS A . n A 1 263 PRO 263 267 267 PRO PRO A . n A 1 264 LYS 264 268 268 LYS LYS A . n A 1 265 ALA 265 269 269 ALA ALA A . n A 1 266 ALA 266 270 270 ALA ALA A . n A 1 267 SER 267 271 271 SER SER A . n A 1 268 ASN 268 272 272 ASN ASN A . n A 1 269 PRO 269 273 273 PRO PRO A . n A 1 270 VAL 270 274 274 VAL VAL A . n A 1 271 ALA 271 275 275 ALA ALA A . n A 1 272 LYS 272 276 276 LYS LYS A . n A 1 273 LYS 273 277 277 LYS LYS A . n A 1 274 PHE 274 278 278 PHE PHE A . n A 1 275 VAL 275 279 279 VAL VAL A . n A 1 276 GLU 276 280 280 GLU GLU A . n A 1 277 VAL 277 281 281 VAL VAL A . n A 1 278 TYR 278 282 282 TYR TYR A . n A 1 279 LYS 279 283 283 LYS LYS A . n A 1 280 GLU 280 284 284 GLU GLU A . n A 1 281 LYS 281 285 285 LYS LYS A . n A 1 282 TYR 282 286 286 TYR TYR A . n A 1 283 GLY 283 287 287 GLY GLY A . n A 1 284 LYS 284 288 288 LYS LYS A . n A 1 285 GLU 285 289 289 GLU GLU A . n A 1 286 PRO 286 290 290 PRO PRO A . n A 1 287 ALA 287 291 291 ALA ALA A . n A 1 288 ALA 288 292 292 ALA ALA A . n A 1 289 LEU 289 293 293 LEU LEU A . n A 1 290 ASN 290 294 294 ASN ASN A . n A 1 291 ALA 291 295 295 ALA ALA A . n A 1 292 LEU 292 296 296 LEU LEU A . n A 1 293 GLY 293 297 297 GLY GLY A . n A 1 294 TYR 294 298 298 TYR TYR A . n A 1 295 ASP 295 299 299 ASP ASP A . n A 1 296 ALA 296 300 300 ALA ALA A . n A 1 297 TYR 297 301 301 TYR TYR A . n A 1 298 MSE 298 302 302 MSE MSE A . n A 1 299 VAL 299 303 303 VAL VAL A . n A 1 300 LEU 300 304 304 LEU LEU A . n A 1 301 LEU 301 305 305 LEU LEU A . n A 1 302 ASP 302 306 306 ASP ASP A . n A 1 303 ALA 303 307 307 ALA ALA A . n A 1 304 ILE 304 308 308 ILE ILE A . n A 1 305 GLU 305 309 309 GLU GLU A . n A 1 306 ARG 306 310 310 ARG ARG A . n A 1 307 ALA 307 311 311 ALA ALA A . n A 1 308 GLY 308 312 312 GLY GLY A . n A 1 309 SER 309 313 313 SER SER A . n A 1 310 PHE 310 314 314 PHE PHE A . n A 1 311 ASP 311 315 315 ASP ASP A . n A 1 312 ARG 312 316 316 ARG ARG A . n A 1 313 GLU 313 317 317 GLU GLU A . n A 1 314 LYS 314 318 318 LYS LYS A . n A 1 315 ILE 315 319 319 ILE ILE A . n A 1 316 ALA 316 320 320 ALA ALA A . n A 1 317 GLU 317 321 321 GLU GLU A . n A 1 318 GLU 318 322 322 GLU GLU A . n A 1 319 ILE 319 323 323 ILE ILE A . n A 1 320 ARG 320 324 324 ARG ARG A . n A 1 321 LYS 321 325 325 LYS LYS A . n A 1 322 THR 322 326 326 THR THR A . n A 1 323 ARG 323 327 327 ARG ARG A . n A 1 324 ASN 324 328 328 ASN ASN A . n A 1 325 PHE 325 329 329 PHE PHE A . n A 1 326 ASN 326 330 330 ASN ASN A . n A 1 327 GLY 327 331 331 GLY GLY A . n A 1 328 ALA 328 332 332 ALA ALA A . n A 1 329 SER 329 333 333 SER SER A . n A 1 330 GLY 330 334 334 GLY GLY A . n A 1 331 ILE 331 335 335 ILE ILE A . n A 1 332 ILE 332 336 336 ILE ILE A . n A 1 333 ASN 333 337 337 ASN ASN A . n A 1 334 ILE 334 338 338 ILE ILE A . n A 1 335 ASP 335 339 339 ASP ASP A . n A 1 336 GLU 336 340 340 GLU GLU A . n A 1 337 ASN 337 341 341 ASN ASN A . n A 1 338 GLY 338 342 342 GLY GLY A . n A 1 339 ASP 339 343 343 ASP ASP A . n A 1 340 ALA 340 344 344 ALA ALA A . n A 1 341 ILE 341 345 345 ILE ILE A . n A 1 342 LYS 342 346 346 LYS LYS A . n A 1 343 SER 343 347 347 SER SER A . n A 1 344 VAL 344 348 348 VAL VAL A . n A 1 345 VAL 345 349 349 VAL VAL A . n A 1 346 VAL 346 350 350 VAL VAL A . n A 1 347 ASN 347 351 351 ASN ASN A . n A 1 348 ILE 348 352 352 ILE ILE A . n A 1 349 VAL 349 353 353 VAL VAL A . n A 1 350 LYS 350 354 354 LYS LYS A . n A 1 351 ASN 351 355 355 ASN ASN A . n A 1 352 GLY 352 356 356 GLY GLY A . n A 1 353 SER 353 357 357 SER SER A . n A 1 354 VAL 354 358 358 VAL VAL A . n A 1 355 ASP 355 359 359 ASP ASP A . n A 1 356 PHE 356 360 360 PHE PHE A . n A 1 357 GLU 357 361 361 GLU GLU A . n A 1 358 ALA 358 362 362 ALA ALA A . n A 1 359 VAL 359 363 363 VAL VAL A . n A 1 360 ILE 360 364 364 ILE ILE A . n A 1 361 ASN 361 365 365 ASN ASN A . n A 1 362 PRO 362 366 366 PRO PRO A . n A 1 363 ASP 363 367 367 ASP ASP A . n A 1 364 ASP 364 368 368 ASP ASP A . n A 1 365 LEU 365 369 369 LEU LEU A . n A 1 366 LYS 366 370 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PHE 1 400 400 PHE PHE A . C 3 SO4 1 401 401 SO4 SO4 A . D 4 EDO 1 402 402 EDO EDO A . E 4 EDO 1 403 403 EDO EDO A . F 4 EDO 1 404 404 EDO EDO A . G 4 EDO 1 405 405 EDO EDO A . H 4 EDO 1 406 406 EDO EDO A . I 4 EDO 1 407 407 EDO EDO A . J 4 EDO 1 408 408 EDO EDO A . K 4 EDO 1 409 409 EDO EDO A . L 4 EDO 1 410 410 EDO EDO A . M 4 EDO 1 411 411 EDO EDO A . N 4 EDO 1 412 412 EDO EDO A . O 5 HOH 1 413 413 HOH HOH A . O 5 HOH 2 414 414 HOH HOH A . O 5 HOH 3 415 415 HOH HOH A . O 5 HOH 4 416 416 HOH HOH A . O 5 HOH 5 417 417 HOH HOH A . O 5 HOH 6 418 418 HOH HOH A . O 5 HOH 7 419 419 HOH HOH A . O 5 HOH 8 420 420 HOH HOH A . O 5 HOH 9 421 421 HOH HOH A . O 5 HOH 10 422 422 HOH HOH A . O 5 HOH 11 423 423 HOH HOH A . O 5 HOH 12 424 424 HOH HOH A . O 5 HOH 13 425 425 HOH HOH A . O 5 HOH 14 426 426 HOH HOH A . O 5 HOH 15 427 427 HOH HOH A . O 5 HOH 16 428 428 HOH HOH A . O 5 HOH 17 429 429 HOH HOH A . O 5 HOH 18 430 430 HOH HOH A . O 5 HOH 19 431 431 HOH HOH A . O 5 HOH 20 432 432 HOH HOH A . O 5 HOH 21 433 433 HOH HOH A . O 5 HOH 22 434 434 HOH HOH A . O 5 HOH 23 435 435 HOH HOH A . O 5 HOH 24 436 436 HOH HOH A . O 5 HOH 25 437 437 HOH HOH A . O 5 HOH 26 438 438 HOH HOH A . O 5 HOH 27 439 439 HOH HOH A . O 5 HOH 28 440 440 HOH HOH A . O 5 HOH 29 441 441 HOH HOH A . O 5 HOH 30 442 442 HOH HOH A . O 5 HOH 31 443 443 HOH HOH A . O 5 HOH 32 444 444 HOH HOH A . O 5 HOH 33 445 445 HOH HOH A . O 5 HOH 34 446 446 HOH HOH A . O 5 HOH 35 447 447 HOH HOH A . O 5 HOH 36 448 448 HOH HOH A . O 5 HOH 37 449 449 HOH HOH A . O 5 HOH 38 450 450 HOH HOH A . O 5 HOH 39 451 451 HOH HOH A . O 5 HOH 40 452 452 HOH HOH A . O 5 HOH 41 453 453 HOH HOH A . O 5 HOH 42 454 454 HOH HOH A . O 5 HOH 43 455 455 HOH HOH A . O 5 HOH 44 456 456 HOH HOH A . O 5 HOH 45 457 457 HOH HOH A . O 5 HOH 46 458 458 HOH HOH A . O 5 HOH 47 459 459 HOH HOH A . O 5 HOH 48 460 460 HOH HOH A . O 5 HOH 49 461 461 HOH HOH A . O 5 HOH 50 462 462 HOH HOH A . O 5 HOH 51 463 463 HOH HOH A . O 5 HOH 52 464 464 HOH HOH A . O 5 HOH 53 465 465 HOH HOH A . O 5 HOH 54 466 466 HOH HOH A . O 5 HOH 55 467 467 HOH HOH A . O 5 HOH 56 468 468 HOH HOH A . O 5 HOH 57 469 469 HOH HOH A . O 5 HOH 58 470 470 HOH HOH A . O 5 HOH 59 471 471 HOH HOH A . O 5 HOH 60 472 472 HOH HOH A . O 5 HOH 61 473 473 HOH HOH A . O 5 HOH 62 474 474 HOH HOH A . O 5 HOH 63 475 475 HOH HOH A . O 5 HOH 64 476 476 HOH HOH A . O 5 HOH 65 477 477 HOH HOH A . O 5 HOH 66 478 478 HOH HOH A . O 5 HOH 67 479 479 HOH HOH A . O 5 HOH 68 480 480 HOH HOH A . O 5 HOH 69 481 481 HOH HOH A . O 5 HOH 70 482 482 HOH HOH A . O 5 HOH 71 483 483 HOH HOH A . O 5 HOH 72 484 484 HOH HOH A . O 5 HOH 73 485 485 HOH HOH A . O 5 HOH 74 486 486 HOH HOH A . O 5 HOH 75 487 487 HOH HOH A . O 5 HOH 76 488 488 HOH HOH A . O 5 HOH 77 489 489 HOH HOH A . O 5 HOH 78 490 490 HOH HOH A . O 5 HOH 79 491 491 HOH HOH A . O 5 HOH 80 492 492 HOH HOH A . O 5 HOH 81 493 493 HOH HOH A . O 5 HOH 82 494 494 HOH HOH A . O 5 HOH 83 495 495 HOH HOH A . O 5 HOH 84 496 496 HOH HOH A . O 5 HOH 85 497 497 HOH HOH A . O 5 HOH 86 498 498 HOH HOH A . O 5 HOH 87 499 499 HOH HOH A . O 5 HOH 88 500 500 HOH HOH A . O 5 HOH 89 501 501 HOH HOH A . O 5 HOH 90 502 502 HOH HOH A . O 5 HOH 91 503 503 HOH HOH A . O 5 HOH 92 504 504 HOH HOH A . O 5 HOH 93 505 505 HOH HOH A . O 5 HOH 94 506 506 HOH HOH A . O 5 HOH 95 507 507 HOH HOH A . O 5 HOH 96 508 508 HOH HOH A . O 5 HOH 97 509 509 HOH HOH A . O 5 HOH 98 510 510 HOH HOH A . O 5 HOH 99 511 511 HOH HOH A . O 5 HOH 100 512 512 HOH HOH A . O 5 HOH 101 513 513 HOH HOH A . O 5 HOH 102 514 514 HOH HOH A . O 5 HOH 103 515 515 HOH HOH A . O 5 HOH 104 516 516 HOH HOH A . O 5 HOH 105 517 517 HOH HOH A . O 5 HOH 106 518 518 HOH HOH A . O 5 HOH 107 519 519 HOH HOH A . O 5 HOH 108 520 520 HOH HOH A . O 5 HOH 109 521 521 HOH HOH A . O 5 HOH 110 522 522 HOH HOH A . O 5 HOH 111 523 523 HOH HOH A . O 5 HOH 112 524 524 HOH HOH A . O 5 HOH 113 525 525 HOH HOH A . O 5 HOH 114 526 526 HOH HOH A . O 5 HOH 115 527 527 HOH HOH A . O 5 HOH 116 528 528 HOH HOH A . O 5 HOH 117 529 529 HOH HOH A . O 5 HOH 118 530 530 HOH HOH A . O 5 HOH 119 531 531 HOH HOH A . O 5 HOH 120 532 532 HOH HOH A . O 5 HOH 121 533 533 HOH HOH A . O 5 HOH 122 534 534 HOH HOH A . O 5 HOH 123 535 535 HOH HOH A . O 5 HOH 124 536 536 HOH HOH A . O 5 HOH 125 537 537 HOH HOH A . O 5 HOH 126 538 538 HOH HOH A . O 5 HOH 127 539 539 HOH HOH A . O 5 HOH 128 540 540 HOH HOH A . O 5 HOH 129 541 541 HOH HOH A . O 5 HOH 130 542 542 HOH HOH A . O 5 HOH 131 543 543 HOH HOH A . O 5 HOH 132 544 544 HOH HOH A . O 5 HOH 133 545 545 HOH HOH A . O 5 HOH 134 546 546 HOH HOH A . O 5 HOH 135 547 547 HOH HOH A . O 5 HOH 136 548 548 HOH HOH A . O 5 HOH 137 549 549 HOH HOH A . O 5 HOH 138 550 550 HOH HOH A . O 5 HOH 139 551 551 HOH HOH A . O 5 HOH 140 552 552 HOH HOH A . O 5 HOH 141 553 553 HOH HOH A . O 5 HOH 142 554 554 HOH HOH A . O 5 HOH 143 555 555 HOH HOH A . O 5 HOH 144 556 556 HOH HOH A . O 5 HOH 145 557 557 HOH HOH A . O 5 HOH 146 558 558 HOH HOH A . O 5 HOH 147 559 559 HOH HOH A . O 5 HOH 148 560 560 HOH HOH A . O 5 HOH 149 561 561 HOH HOH A . O 5 HOH 150 562 562 HOH HOH A . O 5 HOH 151 563 563 HOH HOH A . O 5 HOH 152 564 564 HOH HOH A . O 5 HOH 153 565 565 HOH HOH A . O 5 HOH 154 566 566 HOH HOH A . O 5 HOH 155 567 567 HOH HOH A . O 5 HOH 156 568 568 HOH HOH A . O 5 HOH 157 569 569 HOH HOH A . O 5 HOH 158 570 570 HOH HOH A . O 5 HOH 159 571 571 HOH HOH A . O 5 HOH 160 572 572 HOH HOH A . O 5 HOH 161 573 573 HOH HOH A . O 5 HOH 162 574 574 HOH HOH A . O 5 HOH 163 575 575 HOH HOH A . O 5 HOH 164 576 576 HOH HOH A . O 5 HOH 165 577 577 HOH HOH A . O 5 HOH 166 578 578 HOH HOH A . O 5 HOH 167 579 579 HOH HOH A . O 5 HOH 168 580 580 HOH HOH A . O 5 HOH 169 581 581 HOH HOH A . O 5 HOH 170 582 582 HOH HOH A . O 5 HOH 171 583 583 HOH HOH A . O 5 HOH 172 584 584 HOH HOH A . O 5 HOH 173 585 585 HOH HOH A . O 5 HOH 174 586 586 HOH HOH A . O 5 HOH 175 587 587 HOH HOH A . O 5 HOH 176 588 588 HOH HOH A . O 5 HOH 177 589 589 HOH HOH A . O 5 HOH 178 590 590 HOH HOH A . O 5 HOH 179 591 591 HOH HOH A . O 5 HOH 180 592 592 HOH HOH A . O 5 HOH 181 593 593 HOH HOH A . O 5 HOH 182 594 594 HOH HOH A . O 5 HOH 183 595 595 HOH HOH A . O 5 HOH 184 596 596 HOH HOH A . O 5 HOH 185 597 597 HOH HOH A . O 5 HOH 186 598 598 HOH HOH A . O 5 HOH 187 599 599 HOH HOH A . O 5 HOH 188 600 600 HOH HOH A . O 5 HOH 189 601 601 HOH HOH A . O 5 HOH 190 602 602 HOH HOH A . O 5 HOH 191 603 603 HOH HOH A . O 5 HOH 192 604 604 HOH HOH A . O 5 HOH 193 605 605 HOH HOH A . O 5 HOH 194 606 606 HOH HOH A . O 5 HOH 195 607 607 HOH HOH A . O 5 HOH 196 608 608 HOH HOH A . O 5 HOH 197 609 609 HOH HOH A . O 5 HOH 198 610 610 HOH HOH A . O 5 HOH 199 611 611 HOH HOH A . O 5 HOH 200 612 612 HOH HOH A . O 5 HOH 201 613 613 HOH HOH A . O 5 HOH 202 614 614 HOH HOH A . O 5 HOH 203 615 615 HOH HOH A . O 5 HOH 204 616 616 HOH HOH A . O 5 HOH 205 617 617 HOH HOH A . O 5 HOH 206 618 618 HOH HOH A . O 5 HOH 207 619 619 HOH HOH A . O 5 HOH 208 620 620 HOH HOH A . O 5 HOH 209 621 621 HOH HOH A . O 5 HOH 210 622 622 HOH HOH A . O 5 HOH 211 623 623 HOH HOH A . O 5 HOH 212 624 624 HOH HOH A . O 5 HOH 213 625 625 HOH HOH A . O 5 HOH 214 626 626 HOH HOH A . O 5 HOH 215 627 627 HOH HOH A . O 5 HOH 216 628 628 HOH HOH A . O 5 HOH 217 629 629 HOH HOH A . O 5 HOH 218 630 630 HOH HOH A . O 5 HOH 219 631 631 HOH HOH A . O 5 HOH 220 632 632 HOH HOH A . O 5 HOH 221 633 633 HOH HOH A . O 5 HOH 222 634 634 HOH HOH A . O 5 HOH 223 635 635 HOH HOH A . O 5 HOH 224 636 636 HOH HOH A . O 5 HOH 225 637 637 HOH HOH A . O 5 HOH 226 638 638 HOH HOH A . O 5 HOH 227 639 639 HOH HOH A . O 5 HOH 228 640 640 HOH HOH A . O 5 HOH 229 641 641 HOH HOH A . O 5 HOH 230 642 642 HOH HOH A . O 5 HOH 231 643 643 HOH HOH A . O 5 HOH 232 644 644 HOH HOH A . O 5 HOH 233 645 645 HOH HOH A . O 5 HOH 234 646 646 HOH HOH A . O 5 HOH 235 647 647 HOH HOH A . O 5 HOH 236 648 648 HOH HOH A . O 5 HOH 237 649 649 HOH HOH A . O 5 HOH 238 650 650 HOH HOH A . O 5 HOH 239 651 651 HOH HOH A . O 5 HOH 240 652 652 HOH HOH A . O 5 HOH 241 653 653 HOH HOH A . O 5 HOH 242 654 654 HOH HOH A . O 5 HOH 243 655 655 HOH HOH A . O 5 HOH 244 656 656 HOH HOH A . O 5 HOH 245 657 657 HOH HOH A . O 5 HOH 246 658 658 HOH HOH A . O 5 HOH 247 659 659 HOH HOH A . O 5 HOH 248 660 660 HOH HOH A . O 5 HOH 249 661 661 HOH HOH A . O 5 HOH 250 662 662 HOH HOH A . O 5 HOH 251 663 663 HOH HOH A . O 5 HOH 252 664 664 HOH HOH A . O 5 HOH 253 665 665 HOH HOH A . O 5 HOH 254 666 666 HOH HOH A . O 5 HOH 255 667 667 HOH HOH A . O 5 HOH 256 668 668 HOH HOH A . O 5 HOH 257 669 669 HOH HOH A . O 5 HOH 258 670 670 HOH HOH A . O 5 HOH 259 671 671 HOH HOH A . O 5 HOH 260 672 672 HOH HOH A . O 5 HOH 261 673 673 HOH HOH A . O 5 HOH 262 674 674 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A VAL 4 ? CG1 ? A VAL 16 CG1 2 1 Y 1 A VAL 4 ? CG2 ? A VAL 16 CG2 3 1 Y 1 A GLU 58 ? CD ? A GLU 54 CD 4 1 Y 1 A GLU 58 ? OE1 ? A GLU 54 OE1 5 1 Y 1 A GLU 58 ? OE2 ? A GLU 54 OE2 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 SCALA 3.3.15 ? package 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' ? ? ? 6 REFMAC 5.5.0110 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 7 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? # _cell.entry_id 3TD9 _cell.length_a 86.685 _cell.length_b 91.315 _cell.length_c 90.657 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3TD9 _symmetry.Int_Tables_number 20 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3TD9 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.22 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 44.69 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '2.00% polyethylene glycol 400, 2.00M ammonium sulfate, 0.1M HEPES pH 7.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'double crystal monochromator' _diffrn_detector.pdbx_collection_date 2010-07-23 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91162 1.0 2 0.97920 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_wavelength_list 0.91162,0.97920 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3TD9 _reflns.d_resolution_high 1.90 _reflns.d_resolution_low 29.700 _reflns.number_all 28707 _reflns.number_obs 28707 _reflns.pdbx_netI_over_sigmaI 9.200 _reflns.pdbx_Rsym_value 0.115 _reflns.pdbx_redundancy 4.100 _reflns.percent_possible_obs 100.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.pdbx_Rmerge_I_obs 0.11500 _reflns.B_iso_Wilson_estimate 19.102 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.900 1.950 ? 8564 ? 0.703 2.200 0.703 ? 4.100 ? 2075 100.000 1 1 1.950 2.000 ? 8411 ? 0.551 1.4 0.551 ? 4.100 ? 2040 100.000 2 1 2.000 2.060 ? 8263 ? 0.473 1.6 0.473 ? 4.100 ? 2003 100.000 3 1 2.060 2.120 ? 8007 ? 0.392 1.9 0.392 ? 4.100 ? 1942 100.000 4 1 2.120 2.190 ? 7665 ? 0.320 2.4 0.320 ? 4.100 ? 1854 100.000 5 1 2.190 2.270 ? 7489 ? 0.280 2.7 0.280 ? 4.100 ? 1816 100.000 6 1 2.270 2.360 ? 7284 ? 0.233 3.3 0.233 ? 4.100 ? 1763 100.000 7 1 2.360 2.450 ? 7013 ? 0.212 3.6 0.212 ? 4.100 ? 1697 100.000 8 1 2.450 2.560 ? 6700 ? 0.173 4.4 0.173 ? 4.100 ? 1623 100.000 9 1 2.560 2.690 ? 6408 ? 0.154 4.9 0.154 ? 4.100 ? 1551 100.000 10 1 2.690 2.830 ? 6168 ? 0.128 5.9 0.128 ? 4.100 ? 1492 100.000 11 1 2.830 3.000 ? 5784 ? 0.114 6.6 0.114 ? 4.100 ? 1404 100.000 12 1 3.000 3.210 ? 5438 ? 0.093 7.9 0.093 ? 4.100 ? 1319 100.000 13 1 3.210 3.470 ? 5083 ? 0.071 9.7 0.071 ? 4.100 ? 1239 100.000 14 1 3.470 3.800 ? 4652 ? 0.057 11.5 0.057 ? 4.100 ? 1139 100.000 15 1 3.800 4.250 ? 4225 ? 0.049 13.8 0.049 ? 4.100 ? 1042 100.000 16 1 4.250 4.910 ? 3723 ? 0.043 15.7 0.043 ? 4.000 ? 923 100.000 17 1 4.910 6.010 ? 3169 ? 0.048 13.4 0.048 ? 4.000 ? 792 100.000 18 1 6.010 8.500 ? 2466 ? 0.048 14.1 0.048 ? 3.900 ? 631 100.000 19 1 8.500 29.700 ? 1307 ? 0.037 14.7 0.037 ? 3.600 ? 362 97.900 20 1 # _refine.entry_id 3TD9 _refine.ls_d_res_high 1.9000 _refine.ls_d_res_low 29.700 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 100.0000 _refine.ls_number_reflns_obs 28684 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. 3. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. 5. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 6. SULFATE ION (SO4) AND 1,2-ETHANEDIOL (EDO) MOLECULES FROM THE CRYSTALLIZATION/CRYOPROTECTION SOLUTION ARE MODELED. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1529 _refine.ls_R_factor_R_work 0.1508 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1925 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1450 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 24.9340 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.4000 _refine.aniso_B[2][2] 1.4700 _refine.aniso_B[3][3] -1.8700 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9680 _refine.correlation_coeff_Fo_to_Fc_free 0.9500 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.1250 _refine.overall_SU_ML 0.0840 _refine.overall_SU_B 5.7810 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 65.400 _refine.B_iso_min 11.030 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.300 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.131 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2669 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 61 _refine_hist.number_atoms_solvent 262 _refine_hist.number_atoms_total 2992 _refine_hist.d_res_high 1.9000 _refine_hist.d_res_low 29.700 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 2840 0.016 0.022 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1938 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 3839 1.419 1.969 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 4746 0.920 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 371 5.641 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 128 34.073 25.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 479 13.111 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 14 23.063 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 432 0.094 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 3182 0.006 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 559 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1773 0.690 1.500 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 725 0.206 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 2859 1.234 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 1067 2.238 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 969 3.677 4.500 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.9000 _refine_ls_shell.d_res_low 1.9490 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.9500 _refine_ls_shell.number_reflns_R_work 1962 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2310 _refine_ls_shell.R_factor_R_free 0.2820 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 108 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2070 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3TD9 _struct.title 'Crystal structure of a Leucine binding protein LivK (TM1135) from Thermotoga maritima MSB8 at 1.90 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;leucine binding, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, TRANSPORT PROTEIN ; _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.entry_id 3TD9 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 4 ? O N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9X0L9_THEMA _struct_ref.pdbx_db_accession Q9X0L9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRKVLVTVLLVLTVLSLFSAVKIAVILPMTGGISAFGRMVWEGIQIAHEEKPTVLGEEVELVLLDTRSEKTEAANAAARA IDKEKVLAIIGEVASAHSLAIAPIAEENKVPMVTPASTNPLVTQGRKFVSRVCFIDPFQGAAMAVFAYKNLGAKRVVVFT DVEQDYSVGLSNFFINKFTELGGQVKRVFFRSGDQDFSAQLSVAMSFNPDAIYITGYYPEIALISRQARQLGFTGYILAG DGADAPELIEIGGEAVEGLLFTTHYHPKAASNPVAKKFVEVYKEKYGKEPAALNALGYDAYMVLLDAIERAGSFDREKIA EEIRKTRNFNGASGIINIDENGDAIKSVVVNIVKNGSVDFEAVINPDDLK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3TD9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 13 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 366 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9X0L9 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 370 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 370 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3TD9 MSE A 1 ? UNP Q9X0L9 ? ? 'expression tag' -11 1 1 3TD9 GLY A 2 ? UNP Q9X0L9 ? ? 'expression tag' -10 2 1 3TD9 SER A 3 ? UNP Q9X0L9 ? ? 'expression tag' -9 3 1 3TD9 ASP A 4 ? UNP Q9X0L9 ? ? 'expression tag' -8 4 1 3TD9 LYS A 5 ? UNP Q9X0L9 ? ? 'expression tag' -7 5 1 3TD9 ILE A 6 ? UNP Q9X0L9 ? ? 'expression tag' -6 6 1 3TD9 HIS A 7 ? UNP Q9X0L9 ? ? 'expression tag' -5 7 1 3TD9 HIS A 8 ? UNP Q9X0L9 ? ? 'expression tag' -4 8 1 3TD9 HIS A 9 ? UNP Q9X0L9 ? ? 'expression tag' -3 9 1 3TD9 HIS A 10 ? UNP Q9X0L9 ? ? 'expression tag' -2 10 1 3TD9 HIS A 11 ? UNP Q9X0L9 ? ? 'expression tag' -1 11 1 3TD9 HIS A 12 ? UNP Q9X0L9 ? ? 'expression tag' 0 12 1 3TD9 ? A ? ? UNP Q9X0L9 LEU 5 deletion ? 13 1 3TD9 ? A ? ? UNP Q9X0L9 VAL 6 deletion ? 14 1 3TD9 ? A ? ? UNP Q9X0L9 THR 7 deletion ? 15 1 3TD9 ? A ? ? UNP Q9X0L9 VAL 8 deletion ? 16 1 3TD9 ? A ? ? UNP Q9X0L9 LEU 9 deletion ? 17 1 3TD9 ? A ? ? UNP Q9X0L9 LEU 10 deletion ? 18 1 3TD9 ? A ? ? UNP Q9X0L9 VAL 11 deletion ? 19 1 3TD9 ? A ? ? UNP Q9X0L9 LEU 12 deletion ? 20 1 3TD9 ? A ? ? UNP Q9X0L9 THR 13 deletion ? 21 1 3TD9 ? A ? ? UNP Q9X0L9 VAL 14 deletion ? 22 1 3TD9 ? A ? ? UNP Q9X0L9 LEU 15 deletion ? 23 1 3TD9 ? A ? ? UNP Q9X0L9 SER 16 deletion ? 24 1 3TD9 ? A ? ? UNP Q9X0L9 LEU 17 deletion ? 25 1 3TD9 ? A ? ? UNP Q9X0L9 PHE 18 deletion ? 26 1 3TD9 ? A ? ? UNP Q9X0L9 SER 19 deletion ? 27 1 3TD9 ? A ? ? UNP Q9X0L9 ALA 20 deletion ? 28 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2030 ? 1 MORE -6 ? 1 'SSA (A^2)' 24580 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_565 x,-y+1,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 91.3150000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A DIMER AS THE SIGNIFICANT OLIGOMERIZATION STATE.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE A 29 ? LYS A 47 ? ILE A 33 LYS A 51 1 ? 19 HELX_P HELX_P2 2 GLU A 65 ? LYS A 79 ? GLU A 69 LYS A 83 1 ? 15 HELX_P HELX_P3 3 ALA A 90 ? ASN A 104 ? ALA A 94 ASN A 108 1 ? 15 HELX_P HELX_P4 4 ASN A 115 ? THR A 119 ? ASN A 119 THR A 123 5 ? 5 HELX_P HELX_P5 5 ILE A 131 ? ASN A 146 ? ILE A 135 ASN A 150 1 ? 16 HELX_P HELX_P6 6 GLN A 160 ? LEU A 177 ? GLN A 164 LEU A 181 1 ? 18 HELX_P HELX_P7 7 PHE A 193 ? PHE A 203 ? PHE A 197 PHE A 207 1 ? 11 HELX_P HELX_P8 8 TYR A 213 ? LEU A 227 ? TYR A 217 LEU A 231 1 ? 15 HELX_P HELX_P9 9 ASP A 237 ? ALA A 241 ? ASP A 241 ALA A 245 5 ? 5 HELX_P HELX_P10 10 PRO A 242 ? GLY A 249 ? PRO A 246 GLY A 253 1 ? 8 HELX_P HELX_P11 11 GLU A 250 ? GLU A 253 ? GLU A 254 GLU A 257 5 ? 4 HELX_P HELX_P12 12 HIS A 262 ? ALA A 266 ? HIS A 266 ALA A 270 5 ? 5 HELX_P HELX_P13 13 ASN A 268 ? GLY A 283 ? ASN A 272 GLY A 287 1 ? 16 HELX_P HELX_P14 14 ALA A 287 ? GLY A 308 ? ALA A 291 GLY A 312 1 ? 22 HELX_P HELX_P15 15 ASP A 311 ? ARG A 320 ? ASP A 315 ARG A 324 1 ? 10 HELX_P HELX_P16 16 ASN A 361 ? LEU A 365 ? ASN A 365 LEU A 369 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A PRO 24 C ? ? ? 1_555 A MSE 25 N ? ? A PRO 28 A MSE 29 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale2 covale both ? A MSE 25 C ? ? ? 1_555 A THR 26 N ? ? A MSE 29 A THR 30 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale3 covale both ? A ARG 34 C ? ? ? 1_555 A MSE 35 N ? ? A ARG 38 A MSE 39 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale4 covale both ? A MSE 35 C ? ? ? 1_555 A VAL 36 N ? ? A MSE 39 A VAL 40 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale5 covale both ? A PRO 107 C ? ? ? 1_555 A MSE 108 N ? ? A PRO 111 A MSE 112 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale6 covale both ? A MSE 108 C ? ? ? 1_555 A VAL 109 N ? ? A MSE 112 A VAL 113 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale7 covale both ? A ALA 138 C ? ? ? 1_555 A MSE 139 N ? ? A ALA 142 A MSE 143 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale8 covale both ? A MSE 139 C ? ? ? 1_555 A ALA 140 N ? ? A MSE 143 A ALA 144 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale9 covale both ? A ALA 200 C ? ? ? 1_555 A MSE 201 N ? ? A ALA 204 A MSE 205 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale10 covale both ? A MSE 201 C ? ? ? 1_555 A SER 202 N ? ? A MSE 205 A SER 206 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale11 covale both ? A TYR 297 C ? ? ? 1_555 A MSE 298 N ? ? A TYR 301 A MSE 302 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale12 covale both ? A MSE 298 C ? ? ? 1_555 A VAL 299 N ? ? A MSE 302 A VAL 303 1_555 ? ? ? ? ? ? ? 1.335 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 25 ? . . . . MSE A 29 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE A 35 ? . . . . MSE A 39 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 3 MSE A 108 ? . . . . MSE A 112 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 4 MSE A 139 ? . . . . MSE A 143 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 5 MSE A 201 ? . . . . MSE A 205 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 6 MSE A 298 ? . . . . MSE A 302 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 87 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 91 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 GLU _struct_mon_prot_cis.pdbx_label_seq_id_2 88 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 GLU _struct_mon_prot_cis.pdbx_auth_seq_id_2 92 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -14.20 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 7 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 49 ? VAL A 50 ? THR A 53 VAL A 54 A 2 GLU A 53 ? ASP A 61 ? GLU A 57 ASP A 65 A 3 VAL A 17 ? LEU A 23 ? VAL A 21 LEU A 27 A 4 ALA A 84 ? GLY A 87 ? ALA A 88 GLY A 91 A 5 MSE A 108 ? THR A 110 ? MSE A 112 THR A 114 A 6 VAL A 125 ? ARG A 127 ? VAL A 129 ARG A 131 B 1 GLN A 180 ? PHE A 186 ? GLN A 184 PHE A 190 B 2 ARG A 151 ? ASP A 157 ? ARG A 155 ASP A 161 B 3 ALA A 207 ? ILE A 210 ? ALA A 211 ILE A 214 B 4 TYR A 232 ? ALA A 235 ? TYR A 236 ALA A 239 B 5 LEU A 256 ? THR A 259 ? LEU A 260 THR A 263 B 6 VAL A 344 ? LYS A 350 ? VAL A 348 LYS A 354 B 7 SER A 353 ? ILE A 360 ? SER A 357 ILE A 364 C 1 PHE A 325 ? GLY A 327 ? PHE A 329 GLY A 331 C 2 GLY A 330 ? ILE A 332 ? GLY A 334 ILE A 336 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 50 ? N VAL A 54 O GLU A 53 ? O GLU A 57 A 2 3 O GLU A 56 ? O GLU A 60 N VAL A 17 ? N VAL A 21 A 3 4 N ALA A 20 ? N ALA A 24 O ILE A 86 ? O ILE A 90 A 4 5 N ILE A 85 ? N ILE A 89 O VAL A 109 ? O VAL A 113 A 5 6 N MSE A 108 ? N MSE A 112 O SER A 126 ? O SER A 130 B 1 2 O PHE A 186 ? O PHE A 190 N THR A 156 ? N THR A 160 B 2 3 N PHE A 155 ? N PHE A 159 O TYR A 209 ? O TYR A 213 B 3 4 N ILE A 208 ? N ILE A 212 O LEU A 234 ? O LEU A 238 B 4 5 N ILE A 233 ? N ILE A 237 O LEU A 256 ? O LEU A 260 B 5 6 N THR A 259 ? N THR A 263 O VAL A 345 ? O VAL A 349 B 6 7 N VAL A 344 ? N VAL A 348 O ILE A 360 ? O ILE A 364 C 1 2 N PHE A 325 ? N PHE A 329 O ILE A 332 ? O ILE A 336 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PHE 400 ? 12 'BINDING SITE FOR RESIDUE PHE A 400' AC2 Software A SO4 401 ? 4 'BINDING SITE FOR RESIDUE SO4 A 401' AC3 Software A EDO 402 ? 8 'BINDING SITE FOR RESIDUE EDO A 402' AC4 Software A EDO 403 ? 7 'BINDING SITE FOR RESIDUE EDO A 403' AC5 Software A EDO 404 ? 5 'BINDING SITE FOR RESIDUE EDO A 404' AC6 Software A EDO 405 ? 5 'BINDING SITE FOR RESIDUE EDO A 405' AC7 Software A EDO 406 ? 4 'BINDING SITE FOR RESIDUE EDO A 406' AC8 Software A EDO 407 ? 7 'BINDING SITE FOR RESIDUE EDO A 407' AC9 Software A EDO 408 ? 2 'BINDING SITE FOR RESIDUE EDO A 408' BC1 Software A EDO 409 ? 5 'BINDING SITE FOR RESIDUE EDO A 409' BC2 Software A EDO 410 ? 9 'BINDING SITE FOR RESIDUE EDO A 410' BC3 Software A EDO 411 ? 5 'BINDING SITE FOR RESIDUE EDO A 411' BC4 Software A EDO 412 ? 1 'BINDING SITE FOR RESIDUE EDO A 412' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 PHE A 32 ? PHE A 36 . ? 1_555 ? 2 AC1 12 VAL A 89 ? VAL A 93 . ? 1_555 ? 3 AC1 12 ALA A 90 ? ALA A 94 . ? 1_555 ? 4 AC1 12 SER A 91 ? SER A 95 . ? 1_555 ? 5 AC1 12 ALA A 112 ? ALA A 116 . ? 1_555 ? 6 AC1 12 SER A 113 ? SER A 117 . ? 1_555 ? 7 AC1 12 THR A 114 ? THR A 118 . ? 1_555 ? 8 AC1 12 TYR A 162 ? TYR A 166 . ? 1_555 ? 9 AC1 12 TYR A 213 ? TYR A 217 . ? 1_555 ? 10 AC1 12 ASP A 237 ? ASP A 241 . ? 1_555 ? 11 AC1 12 HIS A 260 ? HIS A 264 . ? 1_555 ? 12 AC1 12 LEU A 289 ? LEU A 293 . ? 1_555 ? 13 AC2 4 ARG A 222 ? ARG A 226 . ? 1_555 ? 14 AC2 4 GLY A 248 ? GLY A 252 . ? 1_555 ? 15 AC2 4 GLY A 249 ? GLY A 253 . ? 1_555 ? 16 AC2 4 GLU A 250 ? GLU A 254 . ? 1_555 ? 17 AC3 8 ARG A 34 ? ARG A 38 . ? 1_555 ? 18 AC3 8 GLU A 38 ? GLU A 42 . ? 1_555 ? 19 AC3 8 LYS A 281 ? LYS A 285 . ? 3_555 ? 20 AC3 8 TYR A 282 ? TYR A 286 . ? 3_555 ? 21 AC3 8 LYS A 284 ? LYS A 288 . ? 1_555 ? 22 AC3 8 HOH O . ? HOH A 490 . ? 1_555 ? 23 AC3 8 HOH O . ? HOH A 500 . ? 1_555 ? 24 AC3 8 HOH O . ? HOH A 554 . ? 3_555 ? 25 AC4 7 ASP A 240 ? ASP A 244 . ? 1_555 ? 26 AC4 7 PHE A 257 ? PHE A 261 . ? 1_555 ? 27 AC4 7 TYR A 261 ? TYR A 265 . ? 1_555 ? 28 AC4 7 ALA A 287 ? ALA A 291 . ? 1_555 ? 29 AC4 7 ALA A 288 ? ALA A 292 . ? 1_555 ? 30 AC4 7 ASN A 347 ? ASN A 351 . ? 1_555 ? 31 AC4 7 VAL A 354 ? VAL A 358 . ? 1_555 ? 32 AC5 5 ASN A 268 ? ASN A 272 . ? 1_555 ? 33 AC5 5 GLY A 330 ? GLY A 334 . ? 1_555 ? 34 AC5 5 ILE A 331 ? ILE A 335 . ? 1_555 ? 35 AC5 5 HOH O . ? HOH A 431 . ? 1_555 ? 36 AC5 5 HOH O . ? HOH A 545 . ? 1_555 ? 37 AC6 5 HIS A 260 ? HIS A 264 . ? 1_555 ? 38 AC6 5 SER A 329 ? SER A 333 . ? 1_555 ? 39 AC6 5 VAL A 345 ? VAL A 349 . ? 1_555 ? 40 AC6 5 EDO L . ? EDO A 410 . ? 1_555 ? 41 AC6 5 HOH O . ? HOH A 479 . ? 1_555 ? 42 AC7 4 ARG A 75 ? ARG A 79 . ? 1_555 ? 43 AC7 4 LYS A 79 ? LYS A 83 . ? 3_555 ? 44 AC7 4 HOH O . ? HOH A 617 . ? 1_555 ? 45 AC7 4 HOH O . ? HOH A 644 . ? 1_555 ? 46 AC8 7 ASP A 240 ? ASP A 244 . ? 1_555 ? 47 AC8 7 ALA A 241 ? ALA A 245 . ? 1_555 ? 48 AC8 7 PRO A 242 ? PRO A 246 . ? 1_555 ? 49 AC8 7 LEU A 244 ? LEU A 248 . ? 1_555 ? 50 AC8 7 ILE A 245 ? ILE A 249 . ? 1_555 ? 51 AC8 7 VAL A 354 ? VAL A 358 . ? 1_555 ? 52 AC8 7 HOH O . ? HOH A 548 . ? 1_555 ? 53 AC9 2 GLN A 191 ? GLN A 195 . ? 1_555 ? 54 AC9 2 ASP A 192 ? ASP A 196 . ? 1_555 ? 55 BC1 5 GLU A 65 ? GLU A 69 . ? 1_555 ? 56 BC1 5 LYS A 66 ? LYS A 70 . ? 1_555 ? 57 BC1 5 THR A 67 ? THR A 71 . ? 1_555 ? 58 BC1 5 GLU A 159 ? GLU A 163 . ? 4_565 ? 59 BC1 5 ARG A 187 ? ARG A 191 . ? 4_565 ? 60 BC2 9 TYR A 261 ? TYR A 265 . ? 1_555 ? 61 BC2 9 HIS A 262 ? HIS A 266 . ? 1_555 ? 62 BC2 9 ALA A 265 ? ALA A 269 . ? 1_555 ? 63 BC2 9 ALA A 271 ? ALA A 275 . ? 1_555 ? 64 BC2 9 ALA A 328 ? ALA A 332 . ? 1_555 ? 65 BC2 9 SER A 329 ? SER A 333 . ? 1_555 ? 66 BC2 9 GLY A 330 ? GLY A 334 . ? 1_555 ? 67 BC2 9 EDO G . ? EDO A 405 . ? 1_555 ? 68 BC2 9 HOH O . ? HOH A 431 . ? 1_555 ? 69 BC3 5 ASP A 78 ? ASP A 82 . ? 4_565 ? 70 BC3 5 ASN A 104 ? ASN A 108 . ? 4_565 ? 71 BC3 5 LYS A 182 ? LYS A 186 . ? 1_555 ? 72 BC3 5 ARG A 183 ? ARG A 187 . ? 1_555 ? 73 BC3 5 HOH O . ? HOH A 506 . ? 4_565 ? 74 BC4 1 MSE A 201 ? MSE A 205 . ? 1_555 ? # _pdbx_entry_details.entry_id 3TD9 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHH. THE RESIDUES 5-20 WERE DELETED FROM THE THE CONSTRUCT TO REMOVE A PREDICTED TRANSMEMBRANE REGION. ; _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 196 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 196 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 196 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.85 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 5.55 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 92 ? ? -92.71 -150.83 2 1 ALA A 116 ? ? -151.72 -7.73 3 1 TYR A 265 ? ? -171.14 148.62 4 1 SER A 271 ? ? -132.22 -57.01 # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 25 A MSE 29 ? MET SELENOMETHIONINE 2 A MSE 35 A MSE 39 ? MET SELENOMETHIONINE 3 A MSE 108 A MSE 112 ? MET SELENOMETHIONINE 4 A MSE 139 A MSE 143 ? MET SELENOMETHIONINE 5 A MSE 201 A MSE 205 ? MET SELENOMETHIONINE 6 A MSE 298 A MSE 302 ? MET SELENOMETHIONINE # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 11.9450 _pdbx_refine_tls.origin_y 31.4990 _pdbx_refine_tls.origin_z 8.8160 _pdbx_refine_tls.T[1][1] 0.0188 _pdbx_refine_tls.T[2][2] 0.0084 _pdbx_refine_tls.T[3][3] 0.0593 _pdbx_refine_tls.T[1][2] 0.0132 _pdbx_refine_tls.T[1][3] 0.0043 _pdbx_refine_tls.T[2][3] 0.0031 _pdbx_refine_tls.L[1][1] 0.6029 _pdbx_refine_tls.L[2][2] 0.3648 _pdbx_refine_tls.L[3][3] 0.9432 _pdbx_refine_tls.L[1][2] -0.1164 _pdbx_refine_tls.L[1][3] -0.0148 _pdbx_refine_tls.L[2][3] 0.0768 _pdbx_refine_tls.S[1][1] 0.0179 _pdbx_refine_tls.S[2][2] -0.0187 _pdbx_refine_tls.S[3][3] 0.0007 _pdbx_refine_tls.S[1][2] 0.0208 _pdbx_refine_tls.S[1][3] -0.0270 _pdbx_refine_tls.S[2][3] 0.0108 _pdbx_refine_tls.S[2][1] 0.0233 _pdbx_refine_tls.S[3][1] 0.0407 _pdbx_refine_tls.S[3][2] 0.0541 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 4 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 369 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -11 ? A MSE 1 2 1 Y 1 A GLY -10 ? A GLY 2 3 1 Y 1 A SER -9 ? A SER 3 4 1 Y 1 A ASP -8 ? A ASP 4 5 1 Y 1 A LYS -7 ? A LYS 5 6 1 Y 1 A ILE -6 ? A ILE 6 7 1 Y 1 A HIS -5 ? A HIS 7 8 1 Y 1 A HIS -4 ? A HIS 8 9 1 Y 1 A HIS -3 ? A HIS 9 10 1 Y 1 A HIS -2 ? A HIS 10 11 1 Y 1 A HIS -1 ? A HIS 11 12 1 Y 1 A HIS 0 ? A HIS 12 13 1 Y 1 A MSE 1 ? A MSE 13 14 1 Y 1 A ARG 2 ? A ARG 14 15 1 Y 1 A LYS 3 ? A LYS 15 16 1 Y 1 A LYS 370 ? A LYS 366 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MSE N N N N 240 MSE CA C N S 241 MSE C C N N 242 MSE O O N N 243 MSE OXT O N N 244 MSE CB C N N 245 MSE CG C N N 246 MSE SE SE N N 247 MSE CE C N N 248 MSE H H N N 249 MSE H2 H N N 250 MSE HA H N N 251 MSE HXT H N N 252 MSE HB2 H N N 253 MSE HB3 H N N 254 MSE HG2 H N N 255 MSE HG3 H N N 256 MSE HE1 H N N 257 MSE HE2 H N N 258 MSE HE3 H N N 259 PHE N N N N 260 PHE CA C N S 261 PHE C C N N 262 PHE O O N N 263 PHE CB C N N 264 PHE CG C Y N 265 PHE CD1 C Y N 266 PHE CD2 C Y N 267 PHE CE1 C Y N 268 PHE CE2 C Y N 269 PHE CZ C Y N 270 PHE OXT O N N 271 PHE H H N N 272 PHE H2 H N N 273 PHE HA H N N 274 PHE HB2 H N N 275 PHE HB3 H N N 276 PHE HD1 H N N 277 PHE HD2 H N N 278 PHE HE1 H N N 279 PHE HE2 H N N 280 PHE HZ H N N 281 PHE HXT H N N 282 PRO N N N N 283 PRO CA C N S 284 PRO C C N N 285 PRO O O N N 286 PRO CB C N N 287 PRO CG C N N 288 PRO CD C N N 289 PRO OXT O N N 290 PRO H H N N 291 PRO HA H N N 292 PRO HB2 H N N 293 PRO HB3 H N N 294 PRO HG2 H N N 295 PRO HG3 H N N 296 PRO HD2 H N N 297 PRO HD3 H N N 298 PRO HXT H N N 299 SER N N N N 300 SER CA C N S 301 SER C C N N 302 SER O O N N 303 SER CB C N N 304 SER OG O N N 305 SER OXT O N N 306 SER H H N N 307 SER H2 H N N 308 SER HA H N N 309 SER HB2 H N N 310 SER HB3 H N N 311 SER HG H N N 312 SER HXT H N N 313 SO4 S S N N 314 SO4 O1 O N N 315 SO4 O2 O N N 316 SO4 O3 O N N 317 SO4 O4 O N N 318 THR N N N N 319 THR CA C N S 320 THR C C N N 321 THR O O N N 322 THR CB C N R 323 THR OG1 O N N 324 THR CG2 C N N 325 THR OXT O N N 326 THR H H N N 327 THR H2 H N N 328 THR HA H N N 329 THR HB H N N 330 THR HG1 H N N 331 THR HG21 H N N 332 THR HG22 H N N 333 THR HG23 H N N 334 THR HXT H N N 335 TRP N N N N 336 TRP CA C N S 337 TRP C C N N 338 TRP O O N N 339 TRP CB C N N 340 TRP CG C Y N 341 TRP CD1 C Y N 342 TRP CD2 C Y N 343 TRP NE1 N Y N 344 TRP CE2 C Y N 345 TRP CE3 C Y N 346 TRP CZ2 C Y N 347 TRP CZ3 C Y N 348 TRP CH2 C Y N 349 TRP OXT O N N 350 TRP H H N N 351 TRP H2 H N N 352 TRP HA H N N 353 TRP HB2 H N N 354 TRP HB3 H N N 355 TRP HD1 H N N 356 TRP HE1 H N N 357 TRP HE3 H N N 358 TRP HZ2 H N N 359 TRP HZ3 H N N 360 TRP HH2 H N N 361 TRP HXT H N N 362 TYR N N N N 363 TYR CA C N S 364 TYR C C N N 365 TYR O O N N 366 TYR CB C N N 367 TYR CG C Y N 368 TYR CD1 C Y N 369 TYR CD2 C Y N 370 TYR CE1 C Y N 371 TYR CE2 C Y N 372 TYR CZ C Y N 373 TYR OH O N N 374 TYR OXT O N N 375 TYR H H N N 376 TYR H2 H N N 377 TYR HA H N N 378 TYR HB2 H N N 379 TYR HB3 H N N 380 TYR HD1 H N N 381 TYR HD2 H N N 382 TYR HE1 H N N 383 TYR HE2 H N N 384 TYR HH H N N 385 TYR HXT H N N 386 VAL N N N N 387 VAL CA C N S 388 VAL C C N N 389 VAL O O N N 390 VAL CB C N N 391 VAL CG1 C N N 392 VAL CG2 C N N 393 VAL OXT O N N 394 VAL H H N N 395 VAL H2 H N N 396 VAL HA H N N 397 VAL HB H N N 398 VAL HG11 H N N 399 VAL HG12 H N N 400 VAL HG13 H N N 401 VAL HG21 H N N 402 VAL HG22 H N N 403 VAL HG23 H N N 404 VAL HXT H N N 405 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MSE N CA sing N N 227 MSE N H sing N N 228 MSE N H2 sing N N 229 MSE CA C sing N N 230 MSE CA CB sing N N 231 MSE CA HA sing N N 232 MSE C O doub N N 233 MSE C OXT sing N N 234 MSE OXT HXT sing N N 235 MSE CB CG sing N N 236 MSE CB HB2 sing N N 237 MSE CB HB3 sing N N 238 MSE CG SE sing N N 239 MSE CG HG2 sing N N 240 MSE CG HG3 sing N N 241 MSE SE CE sing N N 242 MSE CE HE1 sing N N 243 MSE CE HE2 sing N N 244 MSE CE HE3 sing N N 245 PHE N CA sing N N 246 PHE N H sing N N 247 PHE N H2 sing N N 248 PHE CA C sing N N 249 PHE CA CB sing N N 250 PHE CA HA sing N N 251 PHE C O doub N N 252 PHE C OXT sing N N 253 PHE CB CG sing N N 254 PHE CB HB2 sing N N 255 PHE CB HB3 sing N N 256 PHE CG CD1 doub Y N 257 PHE CG CD2 sing Y N 258 PHE CD1 CE1 sing Y N 259 PHE CD1 HD1 sing N N 260 PHE CD2 CE2 doub Y N 261 PHE CD2 HD2 sing N N 262 PHE CE1 CZ doub Y N 263 PHE CE1 HE1 sing N N 264 PHE CE2 CZ sing Y N 265 PHE CE2 HE2 sing N N 266 PHE CZ HZ sing N N 267 PHE OXT HXT sing N N 268 PRO N CA sing N N 269 PRO N CD sing N N 270 PRO N H sing N N 271 PRO CA C sing N N 272 PRO CA CB sing N N 273 PRO CA HA sing N N 274 PRO C O doub N N 275 PRO C OXT sing N N 276 PRO CB CG sing N N 277 PRO CB HB2 sing N N 278 PRO CB HB3 sing N N 279 PRO CG CD sing N N 280 PRO CG HG2 sing N N 281 PRO CG HG3 sing N N 282 PRO CD HD2 sing N N 283 PRO CD HD3 sing N N 284 PRO OXT HXT sing N N 285 SER N CA sing N N 286 SER N H sing N N 287 SER N H2 sing N N 288 SER CA C sing N N 289 SER CA CB sing N N 290 SER CA HA sing N N 291 SER C O doub N N 292 SER C OXT sing N N 293 SER CB OG sing N N 294 SER CB HB2 sing N N 295 SER CB HB3 sing N N 296 SER OG HG sing N N 297 SER OXT HXT sing N N 298 SO4 S O1 doub N N 299 SO4 S O2 doub N N 300 SO4 S O3 sing N N 301 SO4 S O4 sing N N 302 THR N CA sing N N 303 THR N H sing N N 304 THR N H2 sing N N 305 THR CA C sing N N 306 THR CA CB sing N N 307 THR CA HA sing N N 308 THR C O doub N N 309 THR C OXT sing N N 310 THR CB OG1 sing N N 311 THR CB CG2 sing N N 312 THR CB HB sing N N 313 THR OG1 HG1 sing N N 314 THR CG2 HG21 sing N N 315 THR CG2 HG22 sing N N 316 THR CG2 HG23 sing N N 317 THR OXT HXT sing N N 318 TRP N CA sing N N 319 TRP N H sing N N 320 TRP N H2 sing N N 321 TRP CA C sing N N 322 TRP CA CB sing N N 323 TRP CA HA sing N N 324 TRP C O doub N N 325 TRP C OXT sing N N 326 TRP CB CG sing N N 327 TRP CB HB2 sing N N 328 TRP CB HB3 sing N N 329 TRP CG CD1 doub Y N 330 TRP CG CD2 sing Y N 331 TRP CD1 NE1 sing Y N 332 TRP CD1 HD1 sing N N 333 TRP CD2 CE2 doub Y N 334 TRP CD2 CE3 sing Y N 335 TRP NE1 CE2 sing Y N 336 TRP NE1 HE1 sing N N 337 TRP CE2 CZ2 sing Y N 338 TRP CE3 CZ3 doub Y N 339 TRP CE3 HE3 sing N N 340 TRP CZ2 CH2 doub Y N 341 TRP CZ2 HZ2 sing N N 342 TRP CZ3 CH2 sing Y N 343 TRP CZ3 HZ3 sing N N 344 TRP CH2 HH2 sing N N 345 TRP OXT HXT sing N N 346 TYR N CA sing N N 347 TYR N H sing N N 348 TYR N H2 sing N N 349 TYR CA C sing N N 350 TYR CA CB sing N N 351 TYR CA HA sing N N 352 TYR C O doub N N 353 TYR C OXT sing N N 354 TYR CB CG sing N N 355 TYR CB HB2 sing N N 356 TYR CB HB3 sing N N 357 TYR CG CD1 doub Y N 358 TYR CG CD2 sing Y N 359 TYR CD1 CE1 sing Y N 360 TYR CD1 HD1 sing N N 361 TYR CD2 CE2 doub Y N 362 TYR CD2 HD2 sing N N 363 TYR CE1 CZ doub Y N 364 TYR CE1 HE1 sing N N 365 TYR CE2 CZ sing Y N 366 TYR CE2 HE2 sing N N 367 TYR CZ OH sing N N 368 TYR OH HH sing N N 369 TYR OXT HXT sing N N 370 VAL N CA sing N N 371 VAL N H sing N N 372 VAL N H2 sing N N 373 VAL CA C sing N N 374 VAL CA CB sing N N 375 VAL CA HA sing N N 376 VAL C O doub N N 377 VAL C OXT sing N N 378 VAL CB CG1 sing N N 379 VAL CB CG2 sing N N 380 VAL CB HB sing N N 381 VAL CG1 HG11 sing N N 382 VAL CG1 HG12 sing N N 383 VAL CG1 HG13 sing N N 384 VAL CG2 HG21 sing N N 385 VAL CG2 HG22 sing N N 386 VAL CG2 HG23 sing N N 387 VAL OXT HXT sing N N 388 # _atom_sites.entry_id 3TD9 _atom_sites.fract_transf_matrix[1][1] 0.011536 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010951 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011031 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_