HEADER GENE REGULATION 12-AUG-11 3TE6 TITLE CRYSTAL STRUCTURE OF THE S. CEREVISIAE SIR3 AAA+ DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: REGULATORY PROTEIN SIR3; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: AAA+ DOMAIN (UNP RESIDUES 530-845); COMPND 5 SYNONYM: SILENT INFORMATION REGULATOR 3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: SIR3, CMT1, MAR2, STE8, YLR442C, L9753.10; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET41 KEYWDS HETEROCHROMATIN, GENE SILENCING, SIR COMPLEX, HMR, HML, TELOMERE, KEYWDS 2 AAA+ DOMAIN, STRUCTURAL, SIR4, SIR3, SIR2, NUCLEUS, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR M.HASSLER,A.G.LADURNER REVDAT 3 30-OCT-24 3TE6 1 SEQADV LINK REVDAT 2 14-SEP-11 3TE6 1 JRNL REVDAT 1 31-AUG-11 3TE6 0 JRNL AUTH S.EHRENTRAUT,M.HASSLER,M.OPPIKOFER,S.KUENG,J.M.WEBER, JRNL AUTH 2 J.W.MUELLER,S.M.GASSER,A.G.LADURNER,A.E.EHRENHOFER-MURRAY JRNL TITL STRUCTURAL BASIS FOR THE ROLE OF THE SIR3 AAA+ DOMAIN IN JRNL TITL 2 SILENCING: INTERACTION WITH SIR4 AND UNMETHYLATED HISTONE JRNL TITL 3 H3K79. JRNL REF GENES DEV. V. 25 1835 2011 JRNL REFN ISSN 0890-9369 JRNL PMID 21896656 JRNL DOI 10.1101/GAD.17175111 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 3 NUMBER OF REFLECTIONS : 24929 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1271 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.3829 - 5.8202 0.94 2757 152 0.2024 0.2478 REMARK 3 2 5.8202 - 4.6214 0.97 2753 167 0.1977 0.2392 REMARK 3 3 4.6214 - 4.0377 0.98 2764 157 0.1779 0.2567 REMARK 3 4 4.0377 - 3.6687 0.98 2755 140 0.1981 0.2335 REMARK 3 5 3.6687 - 3.4059 0.97 2685 151 0.2393 0.3075 REMARK 3 6 3.4059 - 3.2051 0.94 2649 128 0.2652 0.3517 REMARK 3 7 3.2051 - 3.0447 0.91 2552 136 0.2978 0.4040 REMARK 3 8 3.0447 - 2.9122 0.87 2436 118 0.3156 0.4004 REMARK 3 9 2.9122 - 2.8001 0.83 2307 122 0.3652 0.4527 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.06 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 59.45 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.460 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 79.97 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 4674 REMARK 3 ANGLE : 1.273 6309 REMARK 3 CHIRALITY : 0.085 740 REMARK 3 PLANARITY : 0.004 802 REMARK 3 DIHEDRAL : 17.576 1700 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3TE6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000067371. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-SEP-09 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL (SI 111) REMARK 200 OPTICS : TOROIDAL FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26332 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 200 DATA REDUNDANCY : 1.670 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : 0.06800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.3100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.45300 REMARK 200 R SYM FOR SHELL (I) : 0.63300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M AMMONIUM SULFATE, 2% (W/V) PEG REMARK 280 400, 0.1 M HEPES, PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 23.50950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 528 REMARK 465 ALA A 619 REMARK 465 GLY A 620 REMARK 465 LEU A 637 REMARK 465 CYS A 638 REMARK 465 ILE A 761 REMARK 465 ARG A 762 REMARK 465 GLU A 763 REMARK 465 GLY A 764 REMARK 465 GLN A 765 REMARK 465 ASN A 766 REMARK 465 GLN A 767 REMARK 465 LYS A 768 REMARK 465 GLY A 845 REMARK 465 GLY B 528 REMARK 465 LEU B 618 REMARK 465 ALA B 619 REMARK 465 GLY B 620 REMARK 465 GLU B 635 REMARK 465 ASN B 636 REMARK 465 ILE B 761 REMARK 465 ARG B 762 REMARK 465 GLU B 763 REMARK 465 GLY B 764 REMARK 465 GLN B 765 REMARK 465 ASN B 766 REMARK 465 GLN B 767 REMARK 465 LYS B 768 REMARK 465 GLY B 845 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 536 CG CD OE1 OE2 REMARK 470 GLU A 537 CG CD OE1 OE2 REMARK 470 ARG A 540 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 541 CG CD OE1 OE2 REMARK 470 LYS A 545 CG CD CE NZ REMARK 470 SER A 569 CB OG REMARK 470 SER A 570 CB OG REMARK 470 ALA A 601 CB REMARK 470 ARG A 602 CB CG CD NE CZ NH1 NH2 REMARK 470 LYS A 603 CB CG CD CE NZ REMARK 470 ILE A 607 CG1 CG2 CD1 REMARK 470 GLU A 617 CB CG CD OE1 OE2 REMARK 470 PHE A 630 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 634 CG CD CE NZ REMARK 470 GLU A 635 CB CG CD OE1 OE2 REMARK 470 ASN A 636 CB CG OD1 ND2 REMARK 470 ASP A 640 CB CG OD1 OD2 REMARK 470 ILE A 641 CB CG1 CG2 CD1 REMARK 470 GLU A 644 CB CG CD OE1 OE2 REMARK 470 ALA A 645 CB REMARK 470 LEU A 671 CG CD1 CD2 REMARK 470 LEU A 672 CB CG CD1 CD2 REMARK 470 SER A 673 CB OG REMARK 470 GLU A 674 CB CG CD OE1 OE2 REMARK 470 LYS A 675 CG CD CE NZ REMARK 470 LYS A 682 CG CD CE NZ REMARK 470 LYS A 687 CG CD CE NZ REMARK 470 ASN A 700 CB CG OD1 ND2 REMARK 470 THR A 702 CB OG1 CG2 REMARK 470 ARG A 704 CB CG CD NE CZ NH1 NH2 REMARK 470 GLU A 705 CG CD OE1 OE2 REMARK 470 SER A 712 OG REMARK 470 LYS A 727 CG CD CE NZ REMARK 470 GLU A 729 CG CD OE1 OE2 REMARK 470 ASP A 751 CG OD1 OD2 REMARK 470 LYS A 752 CB CG CD CE NZ REMARK 470 GLU A 754 CG CD OE1 OE2 REMARK 470 ASN A 760 CB CG OD1 ND2 REMARK 470 ILE A 769 CB CG1 CG2 CD1 REMARK 470 LYS A 801 CG CD CE NZ REMARK 470 LYS A 825 CB CG CD CE NZ REMARK 470 LYS A 827 CB CG CD CE NZ REMARK 470 GLU B 536 CG CD OE1 OE2 REMARK 470 GLU B 537 CG CD OE1 OE2 REMARK 470 ARG B 540 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 541 CG CD OE1 OE2 REMARK 470 SER B 570 OG REMARK 470 ALA B 601 CB REMARK 470 ARG B 602 CB CG CD NE CZ NH1 NH2 REMARK 470 LYS B 603 CB CG CD CE NZ REMARK 470 GLU B 617 CG CD OE1 OE2 REMARK 470 MSE B 621 CB CG SE CE REMARK 470 ASP B 622 CG OD1 OD2 REMARK 470 GLU B 626 CG CD OE1 OE2 REMARK 470 LYS B 627 CG CD CE NZ REMARK 470 LYS B 634 CG CD CE NZ REMARK 470 LEU B 637 CB CG CD1 CD2 REMARK 470 CYS B 638 CB SG REMARK 470 ASP B 640 CB CG OD1 OD2 REMARK 470 ILE B 641 CG1 CG2 CD1 REMARK 470 GLU B 644 CG CD OE1 OE2 REMARK 470 LEU B 671 CB CG CD1 CD2 REMARK 470 LEU B 672 CB CG CD1 CD2 REMARK 470 GLU B 674 CG CD OE1 OE2 REMARK 470 LYS B 675 CG CD CE NZ REMARK 470 LYS B 682 CG CD CE NZ REMARK 470 SER B 686 OG REMARK 470 LYS B 687 CG CD CE NZ REMARK 470 ASN B 700 CB CG OD1 ND2 REMARK 470 ARG B 704 CB CG CD NE CZ NH1 NH2 REMARK 470 GLU B 705 CG CD OE1 OE2 REMARK 470 GLN B 706 CG CD OE1 NE2 REMARK 470 ASN B 708 CG OD1 ND2 REMARK 470 SER B 712 OG REMARK 470 LYS B 727 CG CD CE NZ REMARK 470 LYS B 752 CB CG CD CE NZ REMARK 470 LYS B 825 CB CG CD CE NZ REMARK 470 LYS B 827 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER B 689 O HOH B 3 2.06 REMARK 500 O ASN B 530 N ASP B 532 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 530 -133.99 55.08 REMARK 500 ALA A 531 -2.65 43.98 REMARK 500 LEU A 535 -71.34 -40.78 REMARK 500 SER A 570 79.27 -15.65 REMARK 500 ASN A 579 16.05 80.43 REMARK 500 ARG A 602 12.21 168.21 REMARK 500 LYS A 603 8.97 48.08 REMARK 500 LYS A 634 79.69 -58.22 REMARK 500 GLU A 635 -138.47 -97.22 REMARK 500 ASP A 640 -133.37 -75.26 REMARK 500 ILE A 641 75.05 -158.07 REMARK 500 ALA A 656 0.36 -69.22 REMARK 500 ASN A 667 54.50 70.07 REMARK 500 GLU A 669 -96.02 27.60 REMARK 500 ASN A 670 -97.61 -56.70 REMARK 500 LEU A 671 86.86 -48.90 REMARK 500 LEU A 672 91.60 149.01 REMARK 500 GLU A 674 -89.76 71.58 REMARK 500 ASN A 700 23.56 -61.34 REMARK 500 ASP A 726 112.65 90.53 REMARK 500 PRO A 744 155.68 -49.33 REMARK 500 LYS A 753 -6.86 64.78 REMARK 500 ASN A 759 64.04 -58.91 REMARK 500 ASN A 772 36.23 -88.46 REMARK 500 SER A 796 -60.37 -96.30 REMARK 500 ASN B 530 -90.22 -72.72 REMARK 500 ALA B 531 -31.46 55.55 REMARK 500 ILE B 533 74.65 -104.64 REMARK 500 ASP B 565 -76.66 -48.17 REMARK 500 SER B 566 -44.46 -19.14 REMARK 500 SER B 570 51.44 28.35 REMARK 500 ARG B 602 33.80 -78.48 REMARK 500 LYS B 603 34.39 25.36 REMARK 500 SER B 633 -84.67 -167.70 REMARK 500 CYS B 638 -106.37 179.15 REMARK 500 ASN B 652 -89.93 -92.75 REMARK 500 LYS B 655 -37.05 -34.74 REMARK 500 LYS B 660 105.84 105.11 REMARK 500 GLU B 669 -72.78 -10.42 REMARK 500 LEU B 671 26.26 143.44 REMARK 500 SER B 673 -169.85 -65.27 REMARK 500 SER B 686 136.12 -28.35 REMARK 500 ASN B 700 64.67 -64.14 REMARK 500 MSE B 710 108.99 -53.47 REMARK 500 VAL B 725 -121.68 -58.23 REMARK 500 ASP B 726 120.08 -171.14 REMARK 500 PRO B 744 -174.43 -53.56 REMARK 500 ASN B 750 -156.13 -130.06 REMARK 500 PHE B 803 -3.98 -51.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FVU RELATED DB: PDB REMARK 900 STRUCTURE OF THE YEAST SIR3 BAH DOMAIN REMARK 900 RELATED ID: 2FL7 RELATED DB: PDB REMARK 900 S. CEREVISIAE SIR3 BAH DOMAIN REMARK 900 RELATED ID: 1NYH RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE COILED-COIL DIMERIZATION MOTIF OF SIR4 REMARK 900 RELATED ID: 3OWT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF S. CEREVISIAE RAP1-SIR3 COMPLEX DBREF 3TE6 A 530 845 UNP P06701 SIR3_YEAST 530 845 DBREF 3TE6 B 530 845 UNP P06701 SIR3_YEAST 530 845 SEQADV 3TE6 GLY A 528 UNP P06701 EXPRESSION TAG SEQADV 3TE6 PRO A 529 UNP P06701 EXPRESSION TAG SEQADV 3TE6 GLY B 528 UNP P06701 EXPRESSION TAG SEQADV 3TE6 PRO B 529 UNP P06701 EXPRESSION TAG SEQRES 1 A 318 GLY PRO ASN ALA ASP ILE ASN LEU GLU GLU SER ILE ARG SEQRES 2 A 318 GLU SER LEU GLN LYS ARG GLU LEU LEU LYS SER GLN VAL SEQRES 3 A 318 GLU ASP PHE THR ARG ILE PHE LEU PRO ILE TYR ASP SER SEQRES 4 A 318 LEU MSE SER SER GLN ASN LYS LEU PHE TYR ILE THR ASN SEQRES 5 A 318 ALA ASP ASP SER THR LYS PHE GLN LEU VAL ASN ASP VAL SEQRES 6 A 318 MSE ASP GLU LEU ILE THR SER SER ALA ARG LYS GLU LEU SEQRES 7 A 318 PRO ILE PHE ASP TYR ILE HIS ILE ASP ALA LEU GLU LEU SEQRES 8 A 318 ALA GLY MSE ASP ALA LEU TYR GLU LYS ILE TRP PHE ALA SEQRES 9 A 318 ILE SER LYS GLU ASN LEU CYS GLY ASP ILE SER LEU GLU SEQRES 10 A 318 ALA LEU ASN PHE TYR ILE THR ASN VAL PRO LYS ALA LYS SEQRES 11 A 318 LYS ARG LYS THR LEU ILE LEU ILE GLN ASN PRO GLU ASN SEQRES 12 A 318 LEU LEU SER GLU LYS ILE LEU GLN TYR PHE GLU LYS TRP SEQRES 13 A 318 ILE SER SER LYS ASN SER LYS LEU SER ILE ILE CYS VAL SEQRES 14 A 318 GLY GLY HIS ASN VAL THR ILE ARG GLU GLN ILE ASN ILE SEQRES 15 A 318 MSE PRO SER LEU LYS ALA HIS PHE THR GLU ILE LYS LEU SEQRES 16 A 318 ASN LYS VAL ASP LYS ASN GLU LEU GLN GLN MSE ILE ILE SEQRES 17 A 318 THR ARG LEU LYS SER LEU LEU LYS PRO PHE HIS VAL LYS SEQRES 18 A 318 VAL ASN ASP LYS LYS GLU MSE THR ILE TYR ASN ASN ILE SEQRES 19 A 318 ARG GLU GLY GLN ASN GLN LYS ILE PRO ASP ASN VAL ILE SEQRES 20 A 318 VAL ILE ASN HIS LYS ILE ASN ASN LYS ILE THR GLN LEU SEQRES 21 A 318 ILE ALA LYS ASN VAL ALA ASN VAL SER GLY SER THR GLU SEQRES 22 A 318 LYS ALA PHE LYS ILE CYS GLU ALA ALA VAL GLU ILE SER SEQRES 23 A 318 LYS LYS ASP PHE VAL ARG LYS GLY GLY LEU GLN LYS GLY SEQRES 24 A 318 LYS LEU VAL VAL SER GLN GLU MSE VAL PRO ARG TYR PHE SEQRES 25 A 318 SER GLU ALA ILE ASN GLY SEQRES 1 B 318 GLY PRO ASN ALA ASP ILE ASN LEU GLU GLU SER ILE ARG SEQRES 2 B 318 GLU SER LEU GLN LYS ARG GLU LEU LEU LYS SER GLN VAL SEQRES 3 B 318 GLU ASP PHE THR ARG ILE PHE LEU PRO ILE TYR ASP SER SEQRES 4 B 318 LEU MSE SER SER GLN ASN LYS LEU PHE TYR ILE THR ASN SEQRES 5 B 318 ALA ASP ASP SER THR LYS PHE GLN LEU VAL ASN ASP VAL SEQRES 6 B 318 MSE ASP GLU LEU ILE THR SER SER ALA ARG LYS GLU LEU SEQRES 7 B 318 PRO ILE PHE ASP TYR ILE HIS ILE ASP ALA LEU GLU LEU SEQRES 8 B 318 ALA GLY MSE ASP ALA LEU TYR GLU LYS ILE TRP PHE ALA SEQRES 9 B 318 ILE SER LYS GLU ASN LEU CYS GLY ASP ILE SER LEU GLU SEQRES 10 B 318 ALA LEU ASN PHE TYR ILE THR ASN VAL PRO LYS ALA LYS SEQRES 11 B 318 LYS ARG LYS THR LEU ILE LEU ILE GLN ASN PRO GLU ASN SEQRES 12 B 318 LEU LEU SER GLU LYS ILE LEU GLN TYR PHE GLU LYS TRP SEQRES 13 B 318 ILE SER SER LYS ASN SER LYS LEU SER ILE ILE CYS VAL SEQRES 14 B 318 GLY GLY HIS ASN VAL THR ILE ARG GLU GLN ILE ASN ILE SEQRES 15 B 318 MSE PRO SER LEU LYS ALA HIS PHE THR GLU ILE LYS LEU SEQRES 16 B 318 ASN LYS VAL ASP LYS ASN GLU LEU GLN GLN MSE ILE ILE SEQRES 17 B 318 THR ARG LEU LYS SER LEU LEU LYS PRO PHE HIS VAL LYS SEQRES 18 B 318 VAL ASN ASP LYS LYS GLU MSE THR ILE TYR ASN ASN ILE SEQRES 19 B 318 ARG GLU GLY GLN ASN GLN LYS ILE PRO ASP ASN VAL ILE SEQRES 20 B 318 VAL ILE ASN HIS LYS ILE ASN ASN LYS ILE THR GLN LEU SEQRES 21 B 318 ILE ALA LYS ASN VAL ALA ASN VAL SER GLY SER THR GLU SEQRES 22 B 318 LYS ALA PHE LYS ILE CYS GLU ALA ALA VAL GLU ILE SER SEQRES 23 B 318 LYS LYS ASP PHE VAL ARG LYS GLY GLY LEU GLN LYS GLY SEQRES 24 B 318 LYS LEU VAL VAL SER GLN GLU MSE VAL PRO ARG TYR PHE SEQRES 25 B 318 SER GLU ALA ILE ASN GLY MODRES 3TE6 MSE A 568 MET SELENOMETHIONINE MODRES 3TE6 MSE A 593 MET SELENOMETHIONINE MODRES 3TE6 MSE A 621 MET SELENOMETHIONINE MODRES 3TE6 MSE A 710 MET SELENOMETHIONINE MODRES 3TE6 MSE A 733 MET SELENOMETHIONINE MODRES 3TE6 MSE A 755 MET SELENOMETHIONINE MODRES 3TE6 MSE A 834 MET SELENOMETHIONINE MODRES 3TE6 MSE B 568 MET SELENOMETHIONINE MODRES 3TE6 MSE B 593 MET SELENOMETHIONINE MODRES 3TE6 MSE B 621 MET SELENOMETHIONINE MODRES 3TE6 MSE B 710 MET SELENOMETHIONINE MODRES 3TE6 MSE B 733 MET SELENOMETHIONINE MODRES 3TE6 MSE B 755 MET SELENOMETHIONINE MODRES 3TE6 MSE B 834 MET SELENOMETHIONINE HET MSE A 568 8 HET MSE A 593 8 HET MSE A 621 8 HET MSE A 710 8 HET MSE A 733 8 HET MSE A 755 8 HET MSE A 834 8 HET MSE B 568 8 HET MSE B 593 8 HET MSE B 621 4 HET MSE B 710 8 HET MSE B 733 8 HET MSE B 755 8 HET MSE B 834 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 3 HOH *4(H2 O) HELIX 1 1 ASN A 534 SER A 569 1 36 HELIX 2 2 ASP A 582 SER A 599 1 18 HELIX 3 3 ASP A 622 SER A 633 1 12 HELIX 4 4 SER A 642 VAL A 653 1 12 HELIX 5 5 PRO A 654 LYS A 658 5 5 HELIX 6 6 GLU A 674 SER A 686 1 13 HELIX 7 7 ILE A 703 ILE A 709 1 7 HELIX 8 8 MSE A 710 ALA A 715 1 6 HELIX 9 9 ASP A 726 LEU A 742 1 17 HELIX 10 10 ASN A 781 GLY A 797 1 17 HELIX 11 11 SER A 798 GLY A 821 1 24 HELIX 12 12 PRO A 836 ASN A 844 1 9 HELIX 13 13 ASN B 534 SER B 569 1 36 HELIX 14 14 ASP B 582 ARG B 602 1 21 HELIX 15 15 ASP B 622 ALA B 631 1 10 HELIX 16 16 GLY B 639 ASN B 652 1 14 HELIX 17 17 PRO B 654 LYS B 658 5 5 HELIX 18 18 SER B 673 SER B 686 1 14 HELIX 19 19 THR B 702 MSE B 710 1 9 HELIX 20 20 MSE B 710 HIS B 716 1 7 HELIX 21 21 ASP B 726 LEU B 742 1 17 HELIX 22 22 ASN B 781 GLY B 797 1 17 HELIX 23 23 SER B 798 GLY B 821 1 24 HELIX 24 24 VAL B 835 ASN B 844 1 10 SHEET 1 A 5 PHE A 608 ASP A 614 0 SHEET 2 A 5 LYS A 660 GLN A 666 1 O LEU A 662 N ASP A 609 SHEET 3 A 5 LEU A 691 VAL A 696 1 O ILE A 694 N ILE A 663 SHEET 4 A 5 LEU A 574 THR A 578 1 N ILE A 577 O CYS A 695 SHEET 5 A 5 PHE A 717 LYS A 721 1 O THR A 718 N LEU A 574 SHEET 1 B 3 MSE A 755 ILE A 757 0 SHEET 2 B 3 PHE A 745 VAL A 749 -1 N LYS A 748 O THR A 756 SHEET 3 B 3 VAL A 773 ILE A 776 -1 O ILE A 776 N PHE A 745 SHEET 1 C 2 HIS A 778 LYS A 779 0 SHEET 2 C 2 GLN A 832 GLU A 833 1 O GLN A 832 N LYS A 779 SHEET 1 D 2 LEU A 823 GLN A 824 0 SHEET 2 D 2 LYS A 827 LEU A 828 -1 O LYS A 827 N GLN A 824 SHEET 1 E 5 ASP B 609 ASP B 614 0 SHEET 2 E 5 THR B 661 GLN B 666 1 O GLN B 666 N ILE B 613 SHEET 3 E 5 LEU B 691 VAL B 696 1 O ILE B 694 N ILE B 663 SHEET 4 E 5 LEU B 574 THR B 578 1 N ILE B 577 O CYS B 695 SHEET 5 E 5 PHE B 717 LYS B 721 1 O THR B 718 N TYR B 576 SHEET 1 F 3 MSE B 755 TYR B 758 0 SHEET 2 F 3 HIS B 746 VAL B 749 -1 N LYS B 748 O THR B 756 SHEET 3 F 3 VAL B 773 VAL B 775 -1 O ILE B 774 N VAL B 747 SHEET 1 G 2 ASN B 777 LYS B 779 0 SHEET 2 G 2 SER B 831 GLU B 833 1 O GLN B 832 N ASN B 777 SHEET 1 H 2 LEU B 823 GLN B 824 0 SHEET 2 H 2 LYS B 827 LEU B 828 -1 O LYS B 827 N GLN B 824 LINK C LEU A 567 N MSE A 568 1555 1555 1.33 LINK C MSE A 568 N SER A 569 1555 1555 1.33 LINK C VAL A 592 N MSE A 593 1555 1555 1.32 LINK C MSE A 593 N ASP A 594 1555 1555 1.33 LINK C MSE A 621 N ASP A 622 1555 1555 1.32 LINK C ILE A 709 N MSE A 710 1555 1555 1.33 LINK C MSE A 710 N PRO A 711 1555 1555 1.34 LINK C GLN A 732 N MSE A 733 1555 1555 1.33 LINK C MSE A 733 N ILE A 734 1555 1555 1.33 LINK C GLU A 754 N MSE A 755 1555 1555 1.33 LINK C MSE A 755 N THR A 756 1555 1555 1.33 LINK C GLU A 833 N MSE A 834 1555 1555 1.32 LINK C MSE A 834 N VAL A 835 1555 1555 1.33 LINK C LEU B 567 N MSE B 568 1555 1555 1.33 LINK C MSE B 568 N SER B 569 1555 1555 1.32 LINK C VAL B 592 N MSE B 593 1555 1555 1.33 LINK C MSE B 593 N ASP B 594 1555 1555 1.33 LINK C MSE B 621 N ASP B 622 1555 1555 1.33 LINK C ILE B 709 N MSE B 710 1555 1555 1.33 LINK C MSE B 710 N PRO B 711 1555 1555 1.34 LINK C GLN B 732 N MSE B 733 1555 1555 1.32 LINK C MSE B 733 N ILE B 734 1555 1555 1.33 LINK C GLU B 754 N MSE B 755 1555 1555 1.32 LINK C MSE B 755 N THR B 756 1555 1555 1.33 LINK C GLU B 833 N MSE B 834 1555 1555 1.33 LINK C MSE B 834 N VAL B 835 1555 1555 1.33 CISPEP 1 PRO A 529 ASN A 530 0 -3.61 CRYST1 89.590 47.019 127.852 90.00 95.38 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011162 0.000000 0.001052 0.00000 SCALE2 0.000000 0.021268 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007856 0.00000