HEADER VIRAL PROTEIN 21-AUG-11 3TIR TITLE PSEUDO-ATOMIC MODEL OF THE ROUS SARCOMA VIRUS CAPSID HEXAMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: ROUS SARCOMA VIRUS CAPSID PROTEIN P27; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDES 240-465; COMPND 5 SYNONYM: CAPSID PROTEIN P27; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ROUS SARCOMA VIRUS; SOURCE 3 ORGANISM_COMMON: RSV-PRC; SOURCE 4 ORGANISM_TAXID: 11888; SOURCE 5 STRAIN: PRAGUE C; SOURCE 6 GENE: CA, GAG-PRO-POL; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: ROSETTTA(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PTXB1 [NEB] KEYWDS VIRAL CAPSID PROTEIN, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.B.BAILEY,J.K.HYUN,A.K.MITRA,R.L.KINGSTON REVDAT 2 13-SEP-23 3TIR 1 REMARK REVDAT 1 04-APR-12 3TIR 0 JRNL AUTH G.D.BAILEY,J.K.HYUN,A.K.MITRA,R.L.KINGSTON JRNL TITL A STRUCTURAL MODEL FOR THE GENERATION OF CONTINUOUS JRNL TITL 2 CURVATURE ON THE SURFACE OF A RETROVIRAL CAPSID. JRNL REF J.MOL.BIOL. V. 417 212 2012 JRNL REFN ISSN 0022-2836 JRNL PMID 22306463 JRNL DOI 10.1016/J.JMB.2012.01.014 REMARK 2 REMARK 2 RESOLUTION. 4.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 1879 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.394 REMARK 3 FREE R VALUE : 0.391 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.900 REMARK 3 FREE R VALUE TEST SET COUNT : 117 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 4.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 4.21 REMARK 3 REFLECTION IN BIN (WORKING SET) : 144 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.4510 REMARK 3 BIN FREE R VALUE SET COUNT : 10 REMARK 3 BIN FREE R VALUE : 0.2660 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1694 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 185.0 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -11.63000 REMARK 3 B22 (A**2) : -11.63000 REMARK 3 B33 (A**2) : 17.45000 REMARK 3 B12 (A**2) : -5.82000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 1.559 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 1.853 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 340.734 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.795 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.804 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 147 REMARK 3 ORIGIN FOR THE GROUP (A): -1.2667 25.7717 8.8726 REMARK 3 T TENSOR REMARK 3 T11: 1.2016 T22: 1.4612 REMARK 3 T33: 1.7538 T12: 0.2590 REMARK 3 T13: 0.3536 T23: 0.0276 REMARK 3 L TENSOR REMARK 3 L11: 10.1810 L22: 7.2811 REMARK 3 L33: 16.2043 L12: 3.5848 REMARK 3 L13: 0.9209 L23: -2.8645 REMARK 3 S TENSOR REMARK 3 S11: -0.6271 S12: 1.2929 S13: 0.1440 REMARK 3 S21: -1.3421 S22: -0.1927 S23: -2.1593 REMARK 3 S31: 0.3916 S32: -0.3264 S33: 0.8198 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 152 A 226 REMARK 3 ORIGIN FOR THE GROUP (A): 28.2084 30.0496 28.7197 REMARK 3 T TENSOR REMARK 3 T11: 1.4960 T22: 1.8180 REMARK 3 T33: 0.7537 T12: -0.5962 REMARK 3 T13: -0.1603 T23: 0.1261 REMARK 3 L TENSOR REMARK 3 L11: 16.0147 L22: 70.0258 REMARK 3 L33: 7.7530 L12: 10.6232 REMARK 3 L13: -10.7153 L23: -12.9382 REMARK 3 S TENSOR REMARK 3 S11: 0.6961 S12: -2.4521 S13: -0.5495 REMARK 3 S21: 0.9130 S22: -1.6118 S23: -5.8341 REMARK 3 S31: -0.2972 S32: 1.4161 S33: 0.9157 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3TIR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1000067527. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-AUG-09 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 10.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : RIGAKU VARIMAX HF CONFOCAL REMARK 200 OPTICS : RIGAKU VARIMAX HF CONFOCAL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 1996 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.100 REMARK 200 RESOLUTION RANGE LOW (A) : 34.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 10.60 REMARK 200 R MERGE (I) : 0.12200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.50 REMARK 200 R MERGE FOR SHELL (I) : 0.31600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 1EM9 AND 3G1I. REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2-7 %(W/V) PEG 8000 0.2M CAPS/KOH, PH REMARK 280 10.3, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 6 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z REMARK 290 6555 X-Y,X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 63550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -69.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 148 REMARK 465 PRO A 149 REMARK 465 ALA A 150 REMARK 465 GLY A 151 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CZ ARG A 206 O ARG A 225 3665 1.07 REMARK 500 NH2 ARG A 206 O ARG A 225 3665 1.08 REMARK 500 CG ARG A 97 NE2 GLN A 226 6554 1.15 REMARK 500 CB ALA A 64 OD1 ASN A 169 6555 1.20 REMARK 500 NH2 ARG A 206 C ARG A 225 3665 1.24 REMARK 500 NH2 ARG A 206 N GLN A 226 3665 1.50 REMARK 500 CG ARG A 97 CD GLN A 226 6554 1.60 REMARK 500 OE2 GLU A 41 NH2 ARG A 58 5555 1.67 REMARK 500 CZ ARG A 206 C ARG A 225 3665 1.68 REMARK 500 NH2 ARG A 206 CA GLN A 226 3665 1.69 REMARK 500 NH1 ARG A 206 O ARG A 225 3665 1.78 REMARK 500 N PRO A 152 NE2 GLN A 195 4665 1.80 REMARK 500 NE ARG A 206 C ARG A 225 3665 2.01 REMARK 500 CG2 THR A 207 CG ARG A 225 3665 2.02 REMARK 500 CH2 TRP A 11 O SER A 45 6555 2.04 REMARK 500 CB ARG A 97 CD GLN A 226 6554 2.08 REMARK 500 NE ARG A 206 O ARG A 225 3665 2.09 REMARK 500 CZ3 TRP A 11 O SER A 45 6555 2.09 REMARK 500 CD GLU A 41 NH2 ARG A 58 5555 2.11 REMARK 500 CB ARG A 97 OE1 GLN A 226 6554 2.17 REMARK 500 CB ALA A 64 CG ASN A 169 6555 2.17 REMARK 500 CD ARG A 105 OG SER A 161 6554 2.18 REMARK 500 OE1 GLU A 41 NH2 ARG A 58 5555 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1EM9 RELATED DB: PDB REMARK 900 N-TERMINAL DOMAIN OF RSV CA REMARK 900 RELATED ID: 3G21 RELATED DB: PDB REMARK 900 C-TERMINAL DOMAIN OF RSV CA REMARK 900 RELATED ID: 2X8Q RELATED DB: PDB REMARK 900 PSEUDO-ATOMIC MODEL OF THE ROUS SARCOMA VIRUS CAPSID PENTAMER DBREF 3TIR A 1 226 UNP P03354 POL_RSVP 240 465 SEQRES 1 A 226 PRO VAL VAL ILE LYS THR GLU GLY PRO ALA TRP THR PRO SEQRES 2 A 226 LEU GLU PRO LYS LEU ILE THR ARG LEU ALA ASP THR VAL SEQRES 3 A 226 ARG THR LYS GLY LEU ARG SER PRO ILE THR MET ALA GLU SEQRES 4 A 226 VAL GLU ALA LEU MET SER SER PRO LEU LEU PRO HIS ASP SEQRES 5 A 226 VAL THR ASN LEU MET ARG VAL ILE LEU GLY PRO ALA PRO SEQRES 6 A 226 TYR ALA LEU TRP MET ASP ALA TRP GLY VAL GLN LEU GLN SEQRES 7 A 226 THR VAL ILE ALA ALA ALA THR ARG ASP PRO ARG HIS PRO SEQRES 8 A 226 ALA ASN GLY GLN GLY ARG GLY GLU ARG THR ASN LEU ASN SEQRES 9 A 226 ARG LEU LYS GLY LEU ALA ASP GLY MET VAL GLY ASN PRO SEQRES 10 A 226 GLN GLY GLN ALA ALA LEU LEU ARG PRO GLY GLU LEU VAL SEQRES 11 A 226 ALA ILE THR ALA SER ALA LEU GLN ALA PHE ARG GLU VAL SEQRES 12 A 226 ALA ARG LEU ALA GLU PRO ALA GLY PRO TRP ALA ASP ILE SEQRES 13 A 226 MET GLN GLY PRO SER GLU SER PHE VAL ASP PHE ALA ASN SEQRES 14 A 226 ARG LEU ILE LYS ALA VAL GLU GLY SER ASP LEU PRO PRO SEQRES 15 A 226 SER ALA ARG ALA PRO VAL ILE ILE ASP CYS PHE ARG GLN SEQRES 16 A 226 LYS SER GLN PRO ASP ILE GLN GLN LEU ILE ARG THR ALA SEQRES 17 A 226 PRO SER THR LEU THR THR PRO GLY GLU ILE ILE LYS TYR SEQRES 18 A 226 VAL LEU ASP ARG GLN HELIX 1 1 GLU A 15 GLY A 30 1 16 HELIX 2 2 SER A 33 MET A 44 1 12 HELIX 3 3 LEU A 49 LEU A 61 1 13 HELIX 4 4 GLY A 62 ASP A 87 1 26 HELIX 5 5 ASN A 102 LYS A 107 1 6 HELIX 6 6 ASN A 116 LEU A 124 1 9 HELIX 7 7 ARG A 125 ALA A 147 1 23 HELIX 8 9 SER A 163 GLY A 177 1 15 HELIX 9 10 PRO A 181 SER A 183 5 3 HELIX 10 11 ALA A 184 SER A 197 1 14 HELIX 11 12 GLN A 198 THR A 207 1 10 HELIX 12 13 THR A 214 ASP A 224 1 11 SHEET 1 A 2 VAL A 2 ILE A 4 0 SHEET 2 A 2 PRO A 9 TRP A 11 -1 O ALA A 10 N VAL A 3 CRYST1 92.559 92.559 49.985 90.00 90.00 120.00 P 6 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010804 0.006238 0.000000 0.00000 SCALE2 0.000000 0.012475 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020006 0.00000