data_3TJU # _entry.id 3TJU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3TJU pdb_00003tju 10.2210/pdb3tju/pdb RCSB RCSB067566 ? ? WWPDB D_1000067566 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-12-28 2 'Structure model' 1 1 2012-12-12 3 'Structure model' 1 2 2013-07-03 4 'Structure model' 1 3 2023-11-01 5 'Structure model' 1 4 2023-12-06 6 'Structure model' 1 5 2024-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Derived calculations' 10 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site 8 5 'Structure model' chem_comp_atom 9 5 'Structure model' chem_comp_bond 10 5 'Structure model' struct_conn 11 6 'Structure model' pdbx_entry_details 12 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_dist_value' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 6 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 7 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 12 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 13 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 14 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 17 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 19 4 'Structure model' '_struct_ref_seq_dif.details' 20 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 21 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 22 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 23 5 'Structure model' '_chem_comp_atom.atom_id' 24 5 'Structure model' '_chem_comp_bond.atom_id_2' 25 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 26 6 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3TJU _pdbx_database_status.recvd_initial_deposition_date 2011-08-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3TJV . unspecified PDB 3TK9 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, L.' 1 'Zhang, K.' 2 'Wu, L.' 3 'Tong, L.' 4 'Sun, F.' 5 'Fan, Z.' 6 # _citation.id primary _citation.title 'Structural insights into the substrate specificity of human granzyme H: the functional roles of a novel RKR motif' _citation.journal_abbrev J.Immunol. _citation.journal_volume 188 _citation.page_first 765 _citation.page_last 773 _citation.year 2012 _citation.journal_id_ASTM JOIMA3 _citation.country US _citation.journal_id_ISSN 0022-1767 _citation.journal_id_CSD 0952 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22156497 _citation.pdbx_database_id_DOI 10.4049/jimmunol.1101381 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, L.' 1 ? primary 'Zhang, K.' 2 ? primary 'Wu, L.' 3 ? primary 'Liu, S.' 4 ? primary 'Zhang, H.' 5 ? primary 'Zhou, Q.' 6 ? primary 'Tong, L.' 7 ? primary 'Sun, F.' 8 ? primary 'Fan, Z.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Granzyme H' 25211.432 1 3.4.21.- D103N ? ? 2 polymer syn 'Ac-PTSY-CMK inhibitor' 527.011 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 4 water nat water 18.015 30 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'GzmH, CCP-X, Cathepsin G-like 2, CTSGL2, Cytotoxic T-lymphocyte proteinase, Cytotoxic serine protease C, CSP-C' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;IIGGHEAKPHSRPYMAFVQFLQEKSRKRCGGILVRKDFVLTAAHCQGSSINVTLGAHNIKEQERTQQFIPVKRPIPHPAY NPKNFSNNIMLLQLERKAKWTTAVRPLRLPSSKAQVKPGQLCSVAGWGYVSMSTLATTLQEVLLTVQKDCQCERLFHGNY SRATEICVGDPKKTQTGFKGDSGGPLVCKDVAQGILSYGNKKGTPPGVYIKVSHFLPWIKRTMKRL ; ;IIGGHEAKPHSRPYMAFVQFLQEKSRKRCGGILVRKDFVLTAAHCQGSSINVTLGAHNIKEQERTQQFIPVKRPIPHPAY NPKNFSNNIMLLQLERKAKWTTAVRPLRLPSSKAQVKPGQLCSVAGWGYVSMSTLATTLQEVLLTVQKDCQCERLFHGNY SRATEICVGDPKKTQTGFKGDSGGPLVCKDVAQGILSYGNKKGTPPGVYIKVSHFLPWIKRTMKRL ; A ? 2 'polypeptide(L)' no yes '(ACE)PTS(TYW)(0QE)' XPTSYX B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 ILE n 1 3 GLY n 1 4 GLY n 1 5 HIS n 1 6 GLU n 1 7 ALA n 1 8 LYS n 1 9 PRO n 1 10 HIS n 1 11 SER n 1 12 ARG n 1 13 PRO n 1 14 TYR n 1 15 MET n 1 16 ALA n 1 17 PHE n 1 18 VAL n 1 19 GLN n 1 20 PHE n 1 21 LEU n 1 22 GLN n 1 23 GLU n 1 24 LYS n 1 25 SER n 1 26 ARG n 1 27 LYS n 1 28 ARG n 1 29 CYS n 1 30 GLY n 1 31 GLY n 1 32 ILE n 1 33 LEU n 1 34 VAL n 1 35 ARG n 1 36 LYS n 1 37 ASP n 1 38 PHE n 1 39 VAL n 1 40 LEU n 1 41 THR n 1 42 ALA n 1 43 ALA n 1 44 HIS n 1 45 CYS n 1 46 GLN n 1 47 GLY n 1 48 SER n 1 49 SER n 1 50 ILE n 1 51 ASN n 1 52 VAL n 1 53 THR n 1 54 LEU n 1 55 GLY n 1 56 ALA n 1 57 HIS n 1 58 ASN n 1 59 ILE n 1 60 LYS n 1 61 GLU n 1 62 GLN n 1 63 GLU n 1 64 ARG n 1 65 THR n 1 66 GLN n 1 67 GLN n 1 68 PHE n 1 69 ILE n 1 70 PRO n 1 71 VAL n 1 72 LYS n 1 73 ARG n 1 74 PRO n 1 75 ILE n 1 76 PRO n 1 77 HIS n 1 78 PRO n 1 79 ALA n 1 80 TYR n 1 81 ASN n 1 82 PRO n 1 83 LYS n 1 84 ASN n 1 85 PHE n 1 86 SER n 1 87 ASN n 1 88 ASN n 1 89 ILE n 1 90 MET n 1 91 LEU n 1 92 LEU n 1 93 GLN n 1 94 LEU n 1 95 GLU n 1 96 ARG n 1 97 LYS n 1 98 ALA n 1 99 LYS n 1 100 TRP n 1 101 THR n 1 102 THR n 1 103 ALA n 1 104 VAL n 1 105 ARG n 1 106 PRO n 1 107 LEU n 1 108 ARG n 1 109 LEU n 1 110 PRO n 1 111 SER n 1 112 SER n 1 113 LYS n 1 114 ALA n 1 115 GLN n 1 116 VAL n 1 117 LYS n 1 118 PRO n 1 119 GLY n 1 120 GLN n 1 121 LEU n 1 122 CYS n 1 123 SER n 1 124 VAL n 1 125 ALA n 1 126 GLY n 1 127 TRP n 1 128 GLY n 1 129 TYR n 1 130 VAL n 1 131 SER n 1 132 MET n 1 133 SER n 1 134 THR n 1 135 LEU n 1 136 ALA n 1 137 THR n 1 138 THR n 1 139 LEU n 1 140 GLN n 1 141 GLU n 1 142 VAL n 1 143 LEU n 1 144 LEU n 1 145 THR n 1 146 VAL n 1 147 GLN n 1 148 LYS n 1 149 ASP n 1 150 CYS n 1 151 GLN n 1 152 CYS n 1 153 GLU n 1 154 ARG n 1 155 LEU n 1 156 PHE n 1 157 HIS n 1 158 GLY n 1 159 ASN n 1 160 TYR n 1 161 SER n 1 162 ARG n 1 163 ALA n 1 164 THR n 1 165 GLU n 1 166 ILE n 1 167 CYS n 1 168 VAL n 1 169 GLY n 1 170 ASP n 1 171 PRO n 1 172 LYS n 1 173 LYS n 1 174 THR n 1 175 GLN n 1 176 THR n 1 177 GLY n 1 178 PHE n 1 179 LYS n 1 180 GLY n 1 181 ASP n 1 182 SER n 1 183 GLY n 1 184 GLY n 1 185 PRO n 1 186 LEU n 1 187 VAL n 1 188 CYS n 1 189 LYS n 1 190 ASP n 1 191 VAL n 1 192 ALA n 1 193 GLN n 1 194 GLY n 1 195 ILE n 1 196 LEU n 1 197 SER n 1 198 TYR n 1 199 GLY n 1 200 ASN n 1 201 LYS n 1 202 LYS n 1 203 GLY n 1 204 THR n 1 205 PRO n 1 206 PRO n 1 207 GLY n 1 208 VAL n 1 209 TYR n 1 210 ILE n 1 211 LYS n 1 212 VAL n 1 213 SER n 1 214 HIS n 1 215 PHE n 1 216 LEU n 1 217 PRO n 1 218 TRP n 1 219 ILE n 1 220 LYS n 1 221 ARG n 1 222 THR n 1 223 MET n 1 224 LYS n 1 225 ARG n 1 226 LEU n 2 1 ACE n 2 2 PRO n 2 3 THR n 2 4 SER n 2 5 TYW n 2 6 0QE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'GZMH, CGL2, CTSGL2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosseta(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'This sequence is a synthetic construct.' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0QE non-polymer . chloromethane 'Chloro Methyl group' 'C H3 Cl' 50.488 ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 TYW peptide-like n '(2S)-2-amino-3-(4-hydroxyphenyl)propane-1,1-diol' ? 'C9 H13 N O3' 183.204 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 16 16 ILE ILE A . n A 1 2 ILE 2 17 17 ILE ILE A . n A 1 3 GLY 3 18 18 GLY GLY A . n A 1 4 GLY 4 19 19 GLY GLY A . n A 1 5 HIS 5 20 20 HIS HIS A . n A 1 6 GLU 6 21 21 GLU GLU A . n A 1 7 ALA 7 22 22 ALA ALA A . n A 1 8 LYS 8 23 23 LYS LYS A . n A 1 9 PRO 9 24 24 PRO PRO A . n A 1 10 HIS 10 25 25 HIS HIS A . n A 1 11 SER 11 26 26 SER SER A . n A 1 12 ARG 12 27 27 ARG ARG A . n A 1 13 PRO 13 28 28 PRO PRO A . n A 1 14 TYR 14 29 29 TYR TYR A . n A 1 15 MET 15 30 30 MET MET A . n A 1 16 ALA 16 31 31 ALA ALA A . n A 1 17 PHE 17 32 32 PHE PHE A . n A 1 18 VAL 18 33 33 VAL VAL A . n A 1 19 GLN 19 34 34 GLN GLN A . n A 1 20 PHE 20 35 35 PHE PHE A . n A 1 21 LEU 21 36 36 LEU LEU A . n A 1 22 GLN 22 37 37 GLN GLN A . n A 1 23 GLU 23 38 38 GLU GLU A . n A 1 24 LYS 24 39 39 LYS LYS A . n A 1 25 SER 25 40 40 SER SER A . n A 1 26 ARG 26 41 41 ARG ARG A . n A 1 27 LYS 27 42 42 LYS LYS A . n A 1 28 ARG 28 43 43 ARG ARG A . n A 1 29 CYS 29 44 44 CYS CYS A . n A 1 30 GLY 30 45 45 GLY GLY A . n A 1 31 GLY 31 46 46 GLY GLY A . n A 1 32 ILE 32 47 47 ILE ILE A . n A 1 33 LEU 33 48 48 LEU LEU A . n A 1 34 VAL 34 49 49 VAL VAL A . n A 1 35 ARG 35 50 50 ARG ARG A . n A 1 36 LYS 36 51 51 LYS LYS A . n A 1 37 ASP 37 52 52 ASP ASP A . n A 1 38 PHE 38 53 53 PHE PHE A . n A 1 39 VAL 39 54 54 VAL VAL A . n A 1 40 LEU 40 55 55 LEU LEU A . n A 1 41 THR 41 56 56 THR THR A . n A 1 42 ALA 42 57 57 ALA ALA A . n A 1 43 ALA 43 58 58 ALA ALA A . n A 1 44 HIS 44 59 59 HIS HIS A . n A 1 45 CYS 45 60 60 CYS CYS A . n A 1 46 GLN 46 61 61 GLN GLN A . n A 1 47 GLY 47 62 62 GLY GLY A . n A 1 48 SER 48 63 63 SER SER A . n A 1 49 SER 49 64 64 SER SER A . n A 1 50 ILE 50 65 65 ILE ILE A . n A 1 51 ASN 51 66 66 ASN ASN A . n A 1 52 VAL 52 67 67 VAL VAL A . n A 1 53 THR 53 68 68 THR THR A . n A 1 54 LEU 54 69 69 LEU LEU A . n A 1 55 GLY 55 70 70 GLY GLY A . n A 1 56 ALA 56 71 71 ALA ALA A . n A 1 57 HIS 57 72 72 HIS HIS A . n A 1 58 ASN 58 73 73 ASN ASN A . n A 1 59 ILE 59 74 74 ILE ILE A . n A 1 60 LYS 60 75 75 LYS LYS A . n A 1 61 GLU 61 76 76 GLU GLU A . n A 1 62 GLN 62 77 77 GLN GLN A . n A 1 63 GLU 63 78 78 GLU GLU A . n A 1 64 ARG 64 79 79 ARG ARG A . n A 1 65 THR 65 80 80 THR THR A . n A 1 66 GLN 66 81 81 GLN GLN A . n A 1 67 GLN 67 82 82 GLN GLN A . n A 1 68 PHE 68 83 83 PHE PHE A . n A 1 69 ILE 69 84 84 ILE ILE A . n A 1 70 PRO 70 85 85 PRO PRO A . n A 1 71 VAL 71 86 86 VAL VAL A . n A 1 72 LYS 72 87 87 LYS LYS A . n A 1 73 ARG 73 88 88 ARG ARG A . n A 1 74 PRO 74 89 89 PRO PRO A . n A 1 75 ILE 75 90 90 ILE ILE A . n A 1 76 PRO 76 91 91 PRO PRO A . n A 1 77 HIS 77 92 92 HIS HIS A . n A 1 78 PRO 78 93 93 PRO PRO A . n A 1 79 ALA 79 94 94 ALA ALA A . n A 1 80 TYR 80 95 95 TYR TYR A . n A 1 81 ASN 81 96 96 ASN ASN A . n A 1 82 PRO 82 97 97 PRO PRO A . n A 1 83 LYS 83 98 98 LYS LYS A . n A 1 84 ASN 84 99 99 ASN ASN A . n A 1 85 PHE 85 100 100 PHE PHE A . n A 1 86 SER 86 101 101 SER SER A . n A 1 87 ASN 87 102 102 ASN ASN A . n A 1 88 ASN 88 103 103 ASN ASN A . n A 1 89 ILE 89 104 104 ILE ILE A . n A 1 90 MET 90 105 105 MET MET A . n A 1 91 LEU 91 106 106 LEU LEU A . n A 1 92 LEU 92 107 107 LEU LEU A . n A 1 93 GLN 93 108 108 GLN GLN A . n A 1 94 LEU 94 109 109 LEU LEU A . n A 1 95 GLU 95 110 110 GLU GLU A . n A 1 96 ARG 96 111 111 ARG ARG A . n A 1 97 LYS 97 112 112 LYS LYS A . n A 1 98 ALA 98 113 113 ALA ALA A . n A 1 99 LYS 99 114 114 LYS LYS A . n A 1 100 TRP 100 115 115 TRP TRP A . n A 1 101 THR 101 116 116 THR THR A . n A 1 102 THR 102 117 117 THR THR A . n A 1 103 ALA 103 118 118 ALA ALA A . n A 1 104 VAL 104 119 119 VAL VAL A . n A 1 105 ARG 105 120 120 ARG ARG A . n A 1 106 PRO 106 121 121 PRO PRO A . n A 1 107 LEU 107 122 122 LEU LEU A . n A 1 108 ARG 108 123 123 ARG ARG A . n A 1 109 LEU 109 124 124 LEU LEU A . n A 1 110 PRO 110 125 125 PRO PRO A . n A 1 111 SER 111 126 126 SER SER A . n A 1 112 SER 112 127 127 SER SER A . n A 1 113 LYS 113 128 128 LYS LYS A . n A 1 114 ALA 114 129 129 ALA ALA A . n A 1 115 GLN 115 130 130 GLN GLN A . n A 1 116 VAL 116 131 131 VAL VAL A . n A 1 117 LYS 117 132 132 LYS LYS A . n A 1 118 PRO 118 133 133 PRO PRO A . n A 1 119 GLY 119 134 134 GLY GLY A . n A 1 120 GLN 120 135 135 GLN GLN A . n A 1 121 LEU 121 136 136 LEU LEU A . n A 1 122 CYS 122 137 137 CYS CYS A . n A 1 123 SER 123 138 138 SER SER A . n A 1 124 VAL 124 139 139 VAL VAL A . n A 1 125 ALA 125 140 140 ALA ALA A . n A 1 126 GLY 126 141 141 GLY GLY A . n A 1 127 TRP 127 142 142 TRP TRP A . n A 1 128 GLY 128 143 143 GLY GLY A . n A 1 129 TYR 129 144 144 TYR TYR A . n A 1 130 VAL 130 145 145 VAL VAL A . n A 1 131 SER 131 146 146 SER SER A . n A 1 132 MET 132 147 147 MET MET A . n A 1 133 SER 133 148 148 SER SER A . n A 1 134 THR 134 149 149 THR THR A . n A 1 135 LEU 135 150 150 LEU LEU A . n A 1 136 ALA 136 151 151 ALA ALA A . n A 1 137 THR 137 152 152 THR THR A . n A 1 138 THR 138 153 153 THR THR A . n A 1 139 LEU 139 154 154 LEU LEU A . n A 1 140 GLN 140 155 155 GLN GLN A . n A 1 141 GLU 141 156 156 GLU GLU A . n A 1 142 VAL 142 157 157 VAL VAL A . n A 1 143 LEU 143 158 158 LEU LEU A . n A 1 144 LEU 144 159 159 LEU LEU A . n A 1 145 THR 145 160 160 THR THR A . n A 1 146 VAL 146 161 161 VAL VAL A . n A 1 147 GLN 147 162 162 GLN GLN A . n A 1 148 LYS 148 163 163 LYS LYS A . n A 1 149 ASP 149 164 164 ASP ASP A . n A 1 150 CYS 150 165 165 CYS CYS A . n A 1 151 GLN 151 166 166 GLN GLN A . n A 1 152 CYS 152 167 167 CYS CYS A . n A 1 153 GLU 153 168 168 GLU GLU A . n A 1 154 ARG 154 169 169 ARG ARG A . n A 1 155 LEU 155 170 170 LEU LEU A . n A 1 156 PHE 156 171 171 PHE PHE A . n A 1 157 HIS 157 172 172 HIS HIS A . n A 1 158 GLY 158 173 173 GLY GLY A . n A 1 159 ASN 159 174 174 ASN ASN A . n A 1 160 TYR 160 175 175 TYR TYR A . n A 1 161 SER 161 176 176 SER SER A . n A 1 162 ARG 162 177 177 ARG ARG A . n A 1 163 ALA 163 178 178 ALA ALA A . n A 1 164 THR 164 179 179 THR THR A . n A 1 165 GLU 165 180 180 GLU GLU A . n A 1 166 ILE 166 181 181 ILE ILE A . n A 1 167 CYS 167 182 182 CYS CYS A . n A 1 168 VAL 168 183 183 VAL VAL A . n A 1 169 GLY 169 184 184 GLY GLY A . n A 1 170 ASP 170 185 185 ASP ASP A . n A 1 171 PRO 171 186 186 PRO PRO A . n A 1 172 LYS 172 187 187 LYS LYS A . n A 1 173 LYS 173 188 188 LYS LYS A . n A 1 174 THR 174 189 189 THR THR A . n A 1 175 GLN 175 190 190 GLN GLN A . n A 1 176 THR 176 191 191 THR THR A . n A 1 177 GLY 177 192 192 GLY GLY A . n A 1 178 PHE 178 193 193 PHE PHE A . n A 1 179 LYS 179 194 194 LYS LYS A . n A 1 180 GLY 180 195 195 GLY GLY A . n A 1 181 ASP 181 196 196 ASP ASP A . n A 1 182 SER 182 197 197 SER SER A . n A 1 183 GLY 183 198 198 GLY GLY A . n A 1 184 GLY 184 199 199 GLY GLY A . n A 1 185 PRO 185 200 200 PRO PRO A . n A 1 186 LEU 186 201 201 LEU LEU A . n A 1 187 VAL 187 202 202 VAL VAL A . n A 1 188 CYS 188 203 203 CYS CYS A . n A 1 189 LYS 189 204 204 LYS LYS A . n A 1 190 ASP 190 205 205 ASP ASP A . n A 1 191 VAL 191 206 206 VAL VAL A . n A 1 192 ALA 192 207 207 ALA ALA A . n A 1 193 GLN 193 208 208 GLN GLN A . n A 1 194 GLY 194 209 209 GLY GLY A . n A 1 195 ILE 195 210 210 ILE ILE A . n A 1 196 LEU 196 211 211 LEU LEU A . n A 1 197 SER 197 212 212 SER SER A . n A 1 198 TYR 198 213 213 TYR TYR A . n A 1 199 GLY 199 214 214 GLY GLY A . n A 1 200 ASN 200 215 215 ASN ASN A . n A 1 201 LYS 201 216 216 LYS LYS A . n A 1 202 LYS 202 217 217 LYS LYS A . n A 1 203 GLY 203 218 218 GLY GLY A . n A 1 204 THR 204 219 219 THR THR A . n A 1 205 PRO 205 220 220 PRO PRO A . n A 1 206 PRO 206 221 221 PRO PRO A . n A 1 207 GLY 207 222 222 GLY GLY A . n A 1 208 VAL 208 223 223 VAL VAL A . n A 1 209 TYR 209 224 224 TYR TYR A . n A 1 210 ILE 210 225 225 ILE ILE A . n A 1 211 LYS 211 226 226 LYS LYS A . n A 1 212 VAL 212 227 227 VAL VAL A . n A 1 213 SER 213 228 228 SER SER A . n A 1 214 HIS 214 229 229 HIS HIS A . n A 1 215 PHE 215 230 230 PHE PHE A . n A 1 216 LEU 216 231 231 LEU LEU A . n A 1 217 PRO 217 232 232 PRO PRO A . n A 1 218 TRP 218 233 233 TRP TRP A . n A 1 219 ILE 219 234 234 ILE ILE A . n A 1 220 LYS 220 235 235 LYS LYS A . n A 1 221 ARG 221 236 236 ARG ARG A . n A 1 222 THR 222 237 237 THR THR A . n A 1 223 MET 223 238 238 MET MET A . n A 1 224 LYS 224 239 239 LYS LYS A . n A 1 225 ARG 225 240 240 ARG ARG A . n A 1 226 LEU 226 241 ? ? ? A . n B 2 1 ACE 1 1 1 ACE ACE B . n B 2 2 PRO 2 2 2 PRO PRO B . n B 2 3 THR 3 3 3 THR THR B . n B 2 4 SER 4 4 4 SER SER B . n B 2 5 TYW 5 5 5 TYW TYR B . n B 2 6 0QE 6 6 6 0QE 0QE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 1 250 250 SO4 SO4 A . D 3 SO4 1 251 251 SO4 SO4 A . E 3 SO4 1 252 252 SO4 SO4 A . F 4 HOH 1 254 254 HOH HOH A . F 4 HOH 2 255 255 HOH HOH A . F 4 HOH 3 256 256 HOH HOH A . F 4 HOH 4 257 257 HOH HOH A . F 4 HOH 5 258 258 HOH HOH A . F 4 HOH 6 259 259 HOH HOH A . F 4 HOH 7 261 261 HOH HOH A . F 4 HOH 8 262 262 HOH HOH A . F 4 HOH 9 264 264 HOH HOH A . F 4 HOH 10 265 265 HOH HOH A . F 4 HOH 11 266 266 HOH HOH A . F 4 HOH 12 267 267 HOH HOH A . F 4 HOH 13 269 269 HOH HOH A . F 4 HOH 14 270 270 HOH HOH A . F 4 HOH 15 271 271 HOH HOH A . F 4 HOH 16 272 272 HOH HOH A . F 4 HOH 17 273 273 HOH HOH A . F 4 HOH 18 274 274 HOH HOH A . F 4 HOH 19 275 275 HOH HOH A . F 4 HOH 20 276 276 HOH HOH A . F 4 HOH 21 277 277 HOH HOH A . F 4 HOH 22 278 278 HOH HOH A . F 4 HOH 23 280 280 HOH HOH A . F 4 HOH 24 281 281 HOH HOH A . F 4 HOH 25 282 282 HOH HOH A . F 4 HOH 26 283 283 HOH HOH A . F 4 HOH 27 285 285 HOH HOH A . F 4 HOH 28 286 286 HOH HOH A . F 4 HOH 29 287 287 HOH HOH A . F 4 HOH 30 288 288 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 39 ? CB ? A LYS 24 CB 2 1 Y 0 A LYS 39 ? CG ? A LYS 24 CG 3 1 Y 0 A LYS 39 ? CD ? A LYS 24 CD 4 1 Y 0 A LYS 39 ? CE ? A LYS 24 CE 5 1 Y 0 A LYS 39 ? NZ ? A LYS 24 NZ 6 1 Y 0 A GLU 76 ? CB ? A GLU 61 CB 7 1 Y 0 A GLU 76 ? CG ? A GLU 61 CG 8 1 Y 0 A GLU 76 ? CD ? A GLU 61 CD 9 1 Y 0 A GLU 76 ? OE1 ? A GLU 61 OE1 10 1 Y 0 A GLU 76 ? OE2 ? A GLU 61 OE2 11 1 Y 0 A LYS 114 ? CD ? A LYS 99 CD 12 1 Y 0 A LYS 114 ? CE ? A LYS 99 CE 13 1 Y 0 A LYS 114 ? NZ ? A LYS 99 NZ 14 1 Y 0 A LYS 132 ? CD ? A LYS 117 CD 15 1 Y 0 A LYS 132 ? CE ? A LYS 117 CE 16 1 Y 0 A LYS 132 ? NZ ? A LYS 117 NZ 17 1 Y 0 A LYS 187 ? CB ? A LYS 172 CB 18 1 Y 0 A LYS 187 ? CG ? A LYS 172 CG 19 1 Y 0 A LYS 187 ? CD ? A LYS 172 CD 20 1 Y 0 A LYS 187 ? CE ? A LYS 172 CE 21 1 Y 0 A LYS 187 ? NZ ? A LYS 172 NZ 22 1 Y 0 A LYS 235 ? CB ? A LYS 220 CB 23 1 Y 0 A LYS 235 ? CG ? A LYS 220 CG 24 1 Y 0 A LYS 235 ? CD ? A LYS 220 CD 25 1 Y 0 A LYS 235 ? CE ? A LYS 220 CE 26 1 Y 0 A LYS 235 ? NZ ? A LYS 220 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 PHASES phasing . ? 2 REFMAC refinement 5.5.0072 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 PHASER phasing . ? 6 # _cell.entry_id 3TJU _cell.length_a 63.239 _cell.length_b 63.239 _cell.length_c 144.782 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3TJU _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3TJU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.81 _exptl_crystal.density_percent_sol 56.26 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.2M Li2SO4, 0.1M Bicine (pH 8.5), 25% (w/v) PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 270' _diffrn_detector.pdbx_collection_date 2010-06-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Numerical link type Si(111) double crystal monochromator, liquid nitrogen cooling' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NE3A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline AR-NE3A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 3TJU _reflns.observed_criterion_sigma_I -0.5 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 2.70 _reflns.number_obs 8689 _reflns.number_all 8741 _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.099 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 58.5 _reflns.B_iso_Wilson_estimate 50.6 _reflns.pdbx_redundancy 35.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.70 _reflns_shell.d_res_low 2.80 _reflns_shell.percent_possible_all 99.6 _reflns_shell.Rmerge_I_obs 0.248 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 12.7 _reflns_shell.pdbx_redundancy 22.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 843 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3TJU _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 2.7000 _refine.ls_d_res_low 50.0000 _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.6900 _refine.ls_number_reflns_obs 8604 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2320 _refine.ls_R_factor_R_work 0.2294 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2885 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.7000 _refine.ls_number_reflns_R_free 406 _refine.ls_number_reflns_R_work 8198 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 34.7543 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 4.2400 _refine.aniso_B[2][2] 4.2400 _refine.aniso_B[3][3] -8.4800 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9120 _refine.correlation_coeff_Fo_to_Fc_free 0.8850 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.8620 _refine.pdbx_overall_ESU_R_Free 0.3720 _refine.overall_SU_ML 0.2810 _refine.overall_SU_B 29.3100 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 3TK9' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 72.940 _refine.B_iso_min 16.460 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1796 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 30 _refine_hist.number_atoms_total 1841 _refine_hist.d_res_high 2.7000 _refine_hist.d_res_low 50.0000 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' r_bond_refined_d 1818 0.015 0.022 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2461 1.590 1.972 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 226 6.391 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 71 36.785 22.958 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 302 19.409 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 13 16.806 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 267 0.103 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1353 0.007 0.021 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1138 0.549 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1833 1.031 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 680 1.665 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 628 2.765 4.500 ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.700 _refine_ls_shell.d_res_low 2.770 _refine_ls_shell.number_reflns_R_work 596 _refine_ls_shell.R_factor_R_work 0.262 _refine_ls_shell.percent_reflns_obs 99.68 _refine_ls_shell.R_factor_R_free 0.332 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 23 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _database_PDB_matrix.entry_id 3TJU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3TJU _struct.title 'Crystal structure of human granzyme H with an inhibitor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3TJU _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'serine protease, Cytolysis, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP GRAH_HUMAN P20718 1 ;IIGGHEAKPHSRPYMAFVQFLQEKSRKRCGGILVRKDFVLTAAHCQGSSINVTLGAHNIKEQERTQQFIPVKRPIPHPAY NPKNFSNDIMLLQLERKAKWTTAVRPLRLPSSKAQVKPGQLCSVAGWGYVSMSTLATTLQEVLLTVQKDCQCERLFHGNY SRATEICVGDPKKTQTGFKGDSGGPLVCKDVAQGILSYGNKKGTPPGVYIKVSHFLPWIKRTMKRL ; 21 ? 2 PDB 3TJU 3TJU 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3TJU A 1 ? 226 ? P20718 21 ? 246 ? 16 241 2 2 3TJU B 1 ? 6 ? 3TJU 1 ? 6 ? 1 6 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3TJU _struct_ref_seq_dif.mon_id ASN _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 88 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P20718 _struct_ref_seq_dif.db_mon_id ASP _struct_ref_seq_dif.pdbx_seq_db_seq_num 108 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 103 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1560 ? 1 MORE -37 ? 1 'SSA (A^2)' 10960 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 42 ? GLN A 46 ? ALA A 57 GLN A 61 5 ? 5 HELX_P HELX_P2 2 LYS A 148 ? PHE A 156 ? LYS A 163 PHE A 171 1 ? 9 HELX_P HELX_P3 3 VAL A 212 ? LYS A 224 ? VAL A 227 LYS A 239 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 29 SG ? ? ? 1_555 A CYS 45 SG ? ? A CYS 44 A CYS 60 1_555 ? ? ? ? ? ? ? 2.051 ? ? disulf2 disulf ? ? A CYS 122 SG ? ? ? 1_555 A CYS 188 SG ? ? A CYS 137 A CYS 203 1_555 ? ? ? ? ? ? ? 2.055 ? ? disulf3 disulf ? ? A CYS 152 SG ? ? ? 1_555 A CYS 167 SG ? ? A CYS 167 A CYS 182 1_555 ? ? ? ? ? ? ? 2.070 ? ? covale1 covale one ? A HIS 44 NE2 ? ? ? 1_555 B 0QE 6 C1 ? ? A HIS 59 B 0QE 6 1_555 ? ? ? ? ? ? ? 1.461 ? ? covale2 covale one ? A SER 182 OG ? ? ? 1_555 B TYW 5 C ? ? A SER 197 B TYW 5 1_555 ? ? ? ? ? ? ? 1.568 ? ? covale3 covale both ? B ACE 1 C ? ? ? 1_555 B PRO 2 N ? ? B ACE 1 B PRO 2 1_555 ? ? ? ? ? ? ? 1.354 ? ? covale4 covale both ? B SER 4 C ? ? ? 1_555 B TYW 5 N ? ? B SER 4 B TYW 5 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale5 covale both ? B TYW 5 C ? ? ? 1_555 B 0QE 6 C1 ? ? B TYW 5 B 0QE 6 1_555 ? ? ? ? ? ? ? 1.249 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 TYW B 5 ? . . . . TYW B 5 ? 1_555 . . . . . . . TYR 1 TYW Hydrogenation 'Named protein modification' 2 0QE B 6 ? . . . . 0QE B 6 ? 1_555 . . . . . . . ? 1 0QE None 'Non-standard residue' 3 ACE B 1 ? PRO B 2 ? ACE B 1 ? 1_555 PRO B 2 ? 1_555 . . PRO 13 ACE None 'Terminal acetylation' 4 CYS A 29 ? CYS A 45 ? CYS A 44 ? 1_555 CYS A 60 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 122 ? CYS A 188 ? CYS A 137 ? 1_555 CYS A 203 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS A 152 ? CYS A 167 ? CYS A 167 ? 1_555 CYS A 182 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 HIS A 44 ? 0QE B 6 ? HIS A 59 ? 1_555 0QE B 6 ? 1_555 NE2 C1 . . . None 'Non-standard linkage' 8 SER A 182 ? TYW B 5 ? SER A 197 ? 1_555 TYW B 5 ? 1_555 OG C . . . None 'Non-standard linkage' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 205 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 220 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 206 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 221 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.74 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 6 ? C ? 7 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel C 6 7 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 5 ? GLU A 6 ? HIS A 20 GLU A 21 A 2 GLN A 140 ? THR A 145 ? GLN A 155 THR A 160 A 3 LEU A 121 ? GLY A 126 ? LEU A 136 GLY A 141 A 4 PRO A 185 ? CYS A 188 ? PRO A 200 CYS A 203 A 5 VAL A 191 ? GLY A 199 ? VAL A 206 GLY A 214 A 6 GLY A 207 ? LYS A 211 ? GLY A 222 LYS A 226 A 7 GLU A 165 ? VAL A 168 ? GLU A 180 VAL A 183 B 1 HIS A 5 ? GLU A 6 ? HIS A 20 GLU A 21 B 2 GLN A 140 ? THR A 145 ? GLN A 155 THR A 160 B 3 LEU A 121 ? GLY A 126 ? LEU A 136 GLY A 141 B 4 PRO A 185 ? CYS A 188 ? PRO A 200 CYS A 203 B 5 VAL A 191 ? GLY A 199 ? VAL A 206 GLY A 214 B 6 THR B 3 ? SER B 4 ? THR B 3 SER B 4 C 1 MET A 15 ? LEU A 21 ? MET A 30 LEU A 36 C 2 ARG A 26 ? ARG A 35 ? ARG A 41 ARG A 50 C 3 PHE A 38 ? THR A 41 ? PHE A 53 THR A 56 C 4 MET A 90 ? LEU A 94 ? MET A 105 LEU A 109 C 5 GLN A 67 ? PRO A 76 ? GLN A 82 PRO A 91 C 6 SER A 48 ? LEU A 54 ? SER A 63 LEU A 69 C 7 MET A 15 ? LEU A 21 ? MET A 30 LEU A 36 D 1 TYR A 129 ? SER A 131 ? TYR A 144 SER A 146 D 2 THR A 134 ? LEU A 135 ? THR A 149 LEU A 150 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N HIS A 5 ? N HIS A 20 O GLU A 141 ? O GLU A 156 A 2 3 O LEU A 144 ? O LEU A 159 N CYS A 122 ? N CYS A 137 A 3 4 N SER A 123 ? N SER A 138 O VAL A 187 ? O VAL A 202 A 4 5 N CYS A 188 ? N CYS A 203 O VAL A 191 ? O VAL A 206 A 5 6 N TYR A 198 ? N TYR A 213 O VAL A 208 ? O VAL A 223 A 6 7 O TYR A 209 ? O TYR A 224 N ILE A 166 ? N ILE A 181 B 1 2 N HIS A 5 ? N HIS A 20 O GLU A 141 ? O GLU A 156 B 2 3 O LEU A 144 ? O LEU A 159 N CYS A 122 ? N CYS A 137 B 3 4 N SER A 123 ? N SER A 138 O VAL A 187 ? O VAL A 202 B 4 5 N CYS A 188 ? N CYS A 203 O VAL A 191 ? O VAL A 206 B 5 6 N GLY A 199 ? N GLY A 214 O THR B 3 ? O THR B 3 C 1 2 N ALA A 16 ? N ALA A 31 O GLY A 31 ? O GLY A 46 C 2 3 N ILE A 32 ? N ILE A 47 O LEU A 40 ? O LEU A 55 C 3 4 N VAL A 39 ? N VAL A 54 O LEU A 92 ? O LEU A 107 C 4 5 O LEU A 91 ? O LEU A 106 N ILE A 75 ? N ILE A 90 C 5 6 O ILE A 69 ? O ILE A 84 N VAL A 52 ? N VAL A 67 C 6 7 O THR A 53 ? O THR A 68 N PHE A 17 ? N PHE A 32 D 1 2 N VAL A 130 ? N VAL A 145 O THR A 134 ? O THR A 149 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 250 ? 3 'BINDING SITE FOR RESIDUE SO4 A 250' AC2 Software A SO4 251 ? 3 'BINDING SITE FOR RESIDUE SO4 A 251' AC3 Software A SO4 252 ? 4 'BINDING SITE FOR RESIDUE SO4 A 252' AC4 Software ? ? ? ? 9 'BINDING SITE FOR CHAIN B OF AC-PTSY-CMK INHIBITOR' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 HIS A 5 ? HIS A 20 . ? 3_445 ? 2 AC1 3 GLU A 6 ? GLU A 21 . ? 3_445 ? 3 AC1 3 LYS A 83 ? LYS A 98 . ? 1_555 ? 4 AC2 3 ARG A 73 ? ARG A 88 . ? 5_545 ? 5 AC2 3 LYS A 201 ? LYS A 216 . ? 1_555 ? 6 AC2 3 ARG A 225 ? ARG A 240 . ? 5_545 ? 7 AC3 4 GLN A 19 ? GLN A 34 . ? 1_555 ? 8 AC3 4 ARG A 26 ? ARG A 41 . ? 1_555 ? 9 AC3 4 ARG A 28 ? ARG A 43 . ? 1_555 ? 10 AC3 4 LYS A 60 ? LYS A 75 . ? 1_555 ? 11 AC4 9 HIS A 44 ? HIS A 59 . ? 1_555 ? 12 AC4 9 PHE A 85 ? PHE A 100 . ? 1_555 ? 13 AC4 9 ASN A 159 ? ASN A 174 . ? 1_555 ? 14 AC4 9 PHE A 178 ? PHE A 193 . ? 1_555 ? 15 AC4 9 SER A 182 ? SER A 197 . ? 1_555 ? 16 AC4 9 SER A 197 ? SER A 212 . ? 1_555 ? 17 AC4 9 GLY A 199 ? GLY A 214 . ? 1_555 ? 18 AC4 9 ASN A 200 ? ASN A 215 . ? 1_555 ? 19 AC4 9 LYS A 201 ? LYS A 216 . ? 1_555 ? # _pdbx_entry_details.entry_id 3TJU _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ;THE UNBOUND FORM OF THE INHIBITOR (CHAIN B) IS ACE-PRO-THR-SER-TYR-CHLOROMETHYLKETONE. UPON REACTION WITH PROTEIN IT FORMS TWO COVALENT BONDS: 1) A COVALENT BOND TO SER 197 FORMING A HEMIACETAL AND 2) A COVALENT BOND TO NE2 OF HIS 59 ; _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CE1 A HIS 59 ? ? C1 B 0QE 6 ? ? 1.87 2 1 OG A SER 197 ? ? O B TYW 5 ? ? 1.94 3 1 OG A SER 197 ? ? C1 B 0QE 6 ? ? 2.13 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A LYS 132 ? ? CG A LYS 132 ? ? CD A LYS 132 ? ? 129.11 111.60 17.51 2.60 N 2 1 CB A LYS 235 ? ? CA A LYS 235 ? ? C A LYS 235 ? ? 133.17 110.40 22.77 2.00 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 37 ? ? -105.70 -113.55 2 1 GLU A 38 ? ? -72.30 34.94 3 1 LYS A 39 ? ? 86.15 6.93 4 1 CYS A 60 ? ? -91.94 34.97 5 1 SER A 64 ? ? 37.90 61.21 6 1 HIS A 72 ? ? -115.46 -71.67 7 1 PRO A 93 ? ? -48.54 -15.60 8 1 THR A 116 ? ? -114.76 -166.30 9 1 SER A 146 ? ? -174.79 -174.30 10 1 HIS A 172 ? ? -23.23 123.73 11 1 THR A 191 ? ? 179.86 148.82 12 1 LYS A 194 ? ? -35.77 134.66 13 1 SER A 228 ? ? -38.22 -39.14 14 1 LYS A 235 ? ? -56.35 -70.72 15 1 MET A 238 ? ? -63.21 -71.34 16 1 SER B 4 ? ? -37.82 139.89 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 236 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.151 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_molecule_features.prd_id PRD_000977 _pdbx_molecule_features.name '1-acetyl-L-prolyl-L-threonyl-N-[(2R,3S)-4-chloro-3-hydroxy-1-(4-hydroxyphenyl)butan-2-yl]-L-serinamide' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000977 _pdbx_molecule.asym_id B # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id TYW _pdbx_struct_mod_residue.label_seq_id 5 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id TYW _pdbx_struct_mod_residue.auth_seq_id 5 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id TYR _pdbx_struct_mod_residue.details ? # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 8.8470 -28.9110 4.9243 0.0137 0.0105 0.0768 0.0020 -0.0069 -0.0080 0.9579 1.8328 3.4663 -0.0466 -0.3404 0.3402 -0.0163 0.0534 -0.0370 -0.0811 0.0529 0.0577 -0.0748 -0.1868 -0.0121 'X-RAY DIFFRACTION' 2 ? refined 11.3744 -36.7064 15.5725 0.0902 0.1088 0.0778 -0.0272 0.0171 -0.0217 6.3570 16.9369 16.5765 -8.0284 -3.0062 13.9463 -0.2251 -0.2713 0.4964 -0.2859 0.1639 0.1768 0.3095 0.1360 -0.8147 'X-RAY DIFFRACTION' 3 ? refined 17.2413 -34.6990 17.9052 0.3735 0.5754 0.1217 -0.0324 -0.1540 -0.1101 11.4816 1.7377 5.0411 -4.3307 -7.6074 2.8626 0.1640 0.0155 -0.1795 0.6041 0.2936 -0.1804 -0.0450 -0.1105 -0.4147 'X-RAY DIFFRACTION' 4 ? refined 8.3779 -28.4253 4.3877 0.0792 0.0324 0.2664 0.0365 -0.0173 0.0015 0.3207 0.8572 2.2227 -0.1328 -0.4558 1.3121 0.1547 0.0456 -0.2003 0.0882 0.0230 -0.1459 -0.1038 -0.2762 -0.0135 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 16 A 240 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 1 B 5 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 250 A 252 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 A 254 A 288 ? . . . . ? # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id LEU _pdbx_unobs_or_zero_occ_residues.auth_seq_id 241 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id LEU _pdbx_unobs_or_zero_occ_residues.label_seq_id 226 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0QE C1 C N N 1 0QE CL1 CL N N 2 0QE H H N N 3 0QE HA H N N 4 0QE HB H N N 5 ACE C C N N 6 ACE O O N N 7 ACE CH3 C N N 8 ACE H H N N 9 ACE H1 H N N 10 ACE H2 H N N 11 ACE H3 H N N 12 ALA N N N N 13 ALA CA C N S 14 ALA C C N N 15 ALA O O N N 16 ALA CB C N N 17 ALA OXT O N N 18 ALA H H N N 19 ALA H2 H N N 20 ALA HA H N N 21 ALA HB1 H N N 22 ALA HB2 H N N 23 ALA HB3 H N N 24 ALA HXT H N N 25 ARG N N N N 26 ARG CA C N S 27 ARG C C N N 28 ARG O O N N 29 ARG CB C N N 30 ARG CG C N N 31 ARG CD C N N 32 ARG NE N N N 33 ARG CZ C N N 34 ARG NH1 N N N 35 ARG NH2 N N N 36 ARG OXT O N N 37 ARG H H N N 38 ARG H2 H N N 39 ARG HA H N N 40 ARG HB2 H N N 41 ARG HB3 H N N 42 ARG HG2 H N N 43 ARG HG3 H N N 44 ARG HD2 H N N 45 ARG HD3 H N N 46 ARG HE H N N 47 ARG HH11 H N N 48 ARG HH12 H N N 49 ARG HH21 H N N 50 ARG HH22 H N N 51 ARG HXT H N N 52 ASN N N N N 53 ASN CA C N S 54 ASN C C N N 55 ASN O O N N 56 ASN CB C N N 57 ASN CG C N N 58 ASN OD1 O N N 59 ASN ND2 N N N 60 ASN OXT O N N 61 ASN H H N N 62 ASN H2 H N N 63 ASN HA H N N 64 ASN HB2 H N N 65 ASN HB3 H N N 66 ASN HD21 H N N 67 ASN HD22 H N N 68 ASN HXT H N N 69 ASP N N N N 70 ASP CA C N S 71 ASP C C N N 72 ASP O O N N 73 ASP CB C N N 74 ASP CG C N N 75 ASP OD1 O N N 76 ASP OD2 O N N 77 ASP OXT O N N 78 ASP H H N N 79 ASP H2 H N N 80 ASP HA H N N 81 ASP HB2 H N N 82 ASP HB3 H N N 83 ASP HD2 H N N 84 ASP HXT H N N 85 CYS N N N N 86 CYS CA C N R 87 CYS C C N N 88 CYS O O N N 89 CYS CB C N N 90 CYS SG S N N 91 CYS OXT O N N 92 CYS H H N N 93 CYS H2 H N N 94 CYS HA H N N 95 CYS HB2 H N N 96 CYS HB3 H N N 97 CYS HG H N N 98 CYS HXT H N N 99 GLN N N N N 100 GLN CA C N S 101 GLN C C N N 102 GLN O O N N 103 GLN CB C N N 104 GLN CG C N N 105 GLN CD C N N 106 GLN OE1 O N N 107 GLN NE2 N N N 108 GLN OXT O N N 109 GLN H H N N 110 GLN H2 H N N 111 GLN HA H N N 112 GLN HB2 H N N 113 GLN HB3 H N N 114 GLN HG2 H N N 115 GLN HG3 H N N 116 GLN HE21 H N N 117 GLN HE22 H N N 118 GLN HXT H N N 119 GLU N N N N 120 GLU CA C N S 121 GLU C C N N 122 GLU O O N N 123 GLU CB C N N 124 GLU CG C N N 125 GLU CD C N N 126 GLU OE1 O N N 127 GLU OE2 O N N 128 GLU OXT O N N 129 GLU H H N N 130 GLU H2 H N N 131 GLU HA H N N 132 GLU HB2 H N N 133 GLU HB3 H N N 134 GLU HG2 H N N 135 GLU HG3 H N N 136 GLU HE2 H N N 137 GLU HXT H N N 138 GLY N N N N 139 GLY CA C N N 140 GLY C C N N 141 GLY O O N N 142 GLY OXT O N N 143 GLY H H N N 144 GLY H2 H N N 145 GLY HA2 H N N 146 GLY HA3 H N N 147 GLY HXT H N N 148 HIS N N N N 149 HIS CA C N S 150 HIS C C N N 151 HIS O O N N 152 HIS CB C N N 153 HIS CG C Y N 154 HIS ND1 N Y N 155 HIS CD2 C Y N 156 HIS CE1 C Y N 157 HIS NE2 N Y N 158 HIS OXT O N N 159 HIS H H N N 160 HIS H2 H N N 161 HIS HA H N N 162 HIS HB2 H N N 163 HIS HB3 H N N 164 HIS HD1 H N N 165 HIS HD2 H N N 166 HIS HE1 H N N 167 HIS HE2 H N N 168 HIS HXT H N N 169 HOH O O N N 170 HOH H1 H N N 171 HOH H2 H N N 172 ILE N N N N 173 ILE CA C N S 174 ILE C C N N 175 ILE O O N N 176 ILE CB C N S 177 ILE CG1 C N N 178 ILE CG2 C N N 179 ILE CD1 C N N 180 ILE OXT O N N 181 ILE H H N N 182 ILE H2 H N N 183 ILE HA H N N 184 ILE HB H N N 185 ILE HG12 H N N 186 ILE HG13 H N N 187 ILE HG21 H N N 188 ILE HG22 H N N 189 ILE HG23 H N N 190 ILE HD11 H N N 191 ILE HD12 H N N 192 ILE HD13 H N N 193 ILE HXT H N N 194 LEU N N N N 195 LEU CA C N S 196 LEU C C N N 197 LEU O O N N 198 LEU CB C N N 199 LEU CG C N N 200 LEU CD1 C N N 201 LEU CD2 C N N 202 LEU OXT O N N 203 LEU H H N N 204 LEU H2 H N N 205 LEU HA H N N 206 LEU HB2 H N N 207 LEU HB3 H N N 208 LEU HG H N N 209 LEU HD11 H N N 210 LEU HD12 H N N 211 LEU HD13 H N N 212 LEU HD21 H N N 213 LEU HD22 H N N 214 LEU HD23 H N N 215 LEU HXT H N N 216 LYS N N N N 217 LYS CA C N S 218 LYS C C N N 219 LYS O O N N 220 LYS CB C N N 221 LYS CG C N N 222 LYS CD C N N 223 LYS CE C N N 224 LYS NZ N N N 225 LYS OXT O N N 226 LYS H H N N 227 LYS H2 H N N 228 LYS HA H N N 229 LYS HB2 H N N 230 LYS HB3 H N N 231 LYS HG2 H N N 232 LYS HG3 H N N 233 LYS HD2 H N N 234 LYS HD3 H N N 235 LYS HE2 H N N 236 LYS HE3 H N N 237 LYS HZ1 H N N 238 LYS HZ2 H N N 239 LYS HZ3 H N N 240 LYS HXT H N N 241 MET N N N N 242 MET CA C N S 243 MET C C N N 244 MET O O N N 245 MET CB C N N 246 MET CG C N N 247 MET SD S N N 248 MET CE C N N 249 MET OXT O N N 250 MET H H N N 251 MET H2 H N N 252 MET HA H N N 253 MET HB2 H N N 254 MET HB3 H N N 255 MET HG2 H N N 256 MET HG3 H N N 257 MET HE1 H N N 258 MET HE2 H N N 259 MET HE3 H N N 260 MET HXT H N N 261 PHE N N N N 262 PHE CA C N S 263 PHE C C N N 264 PHE O O N N 265 PHE CB C N N 266 PHE CG C Y N 267 PHE CD1 C Y N 268 PHE CD2 C Y N 269 PHE CE1 C Y N 270 PHE CE2 C Y N 271 PHE CZ C Y N 272 PHE OXT O N N 273 PHE H H N N 274 PHE H2 H N N 275 PHE HA H N N 276 PHE HB2 H N N 277 PHE HB3 H N N 278 PHE HD1 H N N 279 PHE HD2 H N N 280 PHE HE1 H N N 281 PHE HE2 H N N 282 PHE HZ H N N 283 PHE HXT H N N 284 PRO N N N N 285 PRO CA C N S 286 PRO C C N N 287 PRO O O N N 288 PRO CB C N N 289 PRO CG C N N 290 PRO CD C N N 291 PRO OXT O N N 292 PRO H H N N 293 PRO HA H N N 294 PRO HB2 H N N 295 PRO HB3 H N N 296 PRO HG2 H N N 297 PRO HG3 H N N 298 PRO HD2 H N N 299 PRO HD3 H N N 300 PRO HXT H N N 301 SER N N N N 302 SER CA C N S 303 SER C C N N 304 SER O O N N 305 SER CB C N N 306 SER OG O N N 307 SER OXT O N N 308 SER H H N N 309 SER H2 H N N 310 SER HA H N N 311 SER HB2 H N N 312 SER HB3 H N N 313 SER HG H N N 314 SER HXT H N N 315 SO4 S S N N 316 SO4 O1 O N N 317 SO4 O2 O N N 318 SO4 O3 O N N 319 SO4 O4 O N N 320 THR N N N N 321 THR CA C N S 322 THR C C N N 323 THR O O N N 324 THR CB C N R 325 THR OG1 O N N 326 THR CG2 C N N 327 THR OXT O N N 328 THR H H N N 329 THR H2 H N N 330 THR HA H N N 331 THR HB H N N 332 THR HG1 H N N 333 THR HG21 H N N 334 THR HG22 H N N 335 THR HG23 H N N 336 THR HXT H N N 337 TRP N N N N 338 TRP CA C N S 339 TRP C C N N 340 TRP O O N N 341 TRP CB C N N 342 TRP CG C Y N 343 TRP CD1 C Y N 344 TRP CD2 C Y N 345 TRP NE1 N Y N 346 TRP CE2 C Y N 347 TRP CE3 C Y N 348 TRP CZ2 C Y N 349 TRP CZ3 C Y N 350 TRP CH2 C Y N 351 TRP OXT O N N 352 TRP H H N N 353 TRP H2 H N N 354 TRP HA H N N 355 TRP HB2 H N N 356 TRP HB3 H N N 357 TRP HD1 H N N 358 TRP HE1 H N N 359 TRP HE3 H N N 360 TRP HZ2 H N N 361 TRP HZ3 H N N 362 TRP HH2 H N N 363 TRP HXT H N N 364 TYR N N N N 365 TYR CA C N S 366 TYR C C N N 367 TYR O O N N 368 TYR CB C N N 369 TYR CG C Y N 370 TYR CD1 C Y N 371 TYR CD2 C Y N 372 TYR CE1 C Y N 373 TYR CE2 C Y N 374 TYR CZ C Y N 375 TYR OH O N N 376 TYR OXT O N N 377 TYR H H N N 378 TYR H2 H N N 379 TYR HA H N N 380 TYR HB2 H N N 381 TYR HB3 H N N 382 TYR HD1 H N N 383 TYR HD2 H N N 384 TYR HE1 H N N 385 TYR HE2 H N N 386 TYR HH H N N 387 TYR HXT H N N 388 TYW C C N N 389 TYW N N N N 390 TYW O O N N 391 TYW CA C N S 392 TYW CB C N N 393 TYW CG C Y N 394 TYW OH O N N 395 TYW CZ C Y N 396 TYW CD1 C Y N 397 TYW CD2 C Y N 398 TYW CE1 C Y N 399 TYW CE2 C Y N 400 TYW OXT O N N 401 TYW H H N N 402 TYW H2 H N N 403 TYW HA H N N 404 TYW HB H N N 405 TYW HBA H N N 406 TYW HOH H N N 407 TYW HD1 H N N 408 TYW HD2 H N N 409 TYW HE1 H N N 410 TYW HE2 H N N 411 TYW HO H N N 412 TYW HXT H N N 413 TYW H1 H N N 414 VAL N N N N 415 VAL CA C N S 416 VAL C C N N 417 VAL O O N N 418 VAL CB C N N 419 VAL CG1 C N N 420 VAL CG2 C N N 421 VAL OXT O N N 422 VAL H H N N 423 VAL H2 H N N 424 VAL HA H N N 425 VAL HB H N N 426 VAL HG11 H N N 427 VAL HG12 H N N 428 VAL HG13 H N N 429 VAL HG21 H N N 430 VAL HG22 H N N 431 VAL HG23 H N N 432 VAL HXT H N N 433 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0QE C1 CL1 sing N N 1 0QE C1 H sing N N 2 0QE C1 HA sing N N 3 0QE C1 HB sing N N 4 ACE C O doub N N 5 ACE C CH3 sing N N 6 ACE C H sing N N 7 ACE CH3 H1 sing N N 8 ACE CH3 H2 sing N N 9 ACE CH3 H3 sing N N 10 ALA N CA sing N N 11 ALA N H sing N N 12 ALA N H2 sing N N 13 ALA CA C sing N N 14 ALA CA CB sing N N 15 ALA CA HA sing N N 16 ALA C O doub N N 17 ALA C OXT sing N N 18 ALA CB HB1 sing N N 19 ALA CB HB2 sing N N 20 ALA CB HB3 sing N N 21 ALA OXT HXT sing N N 22 ARG N CA sing N N 23 ARG N H sing N N 24 ARG N H2 sing N N 25 ARG CA C sing N N 26 ARG CA CB sing N N 27 ARG CA HA sing N N 28 ARG C O doub N N 29 ARG C OXT sing N N 30 ARG CB CG sing N N 31 ARG CB HB2 sing N N 32 ARG CB HB3 sing N N 33 ARG CG CD sing N N 34 ARG CG HG2 sing N N 35 ARG CG HG3 sing N N 36 ARG CD NE sing N N 37 ARG CD HD2 sing N N 38 ARG CD HD3 sing N N 39 ARG NE CZ sing N N 40 ARG NE HE sing N N 41 ARG CZ NH1 sing N N 42 ARG CZ NH2 doub N N 43 ARG NH1 HH11 sing N N 44 ARG NH1 HH12 sing N N 45 ARG NH2 HH21 sing N N 46 ARG NH2 HH22 sing N N 47 ARG OXT HXT sing N N 48 ASN N CA sing N N 49 ASN N H sing N N 50 ASN N H2 sing N N 51 ASN CA C sing N N 52 ASN CA CB sing N N 53 ASN CA HA sing N N 54 ASN C O doub N N 55 ASN C OXT sing N N 56 ASN CB CG sing N N 57 ASN CB HB2 sing N N 58 ASN CB HB3 sing N N 59 ASN CG OD1 doub N N 60 ASN CG ND2 sing N N 61 ASN ND2 HD21 sing N N 62 ASN ND2 HD22 sing N N 63 ASN OXT HXT sing N N 64 ASP N CA sing N N 65 ASP N H sing N N 66 ASP N H2 sing N N 67 ASP CA C sing N N 68 ASP CA CB sing N N 69 ASP CA HA sing N N 70 ASP C O doub N N 71 ASP C OXT sing N N 72 ASP CB CG sing N N 73 ASP CB HB2 sing N N 74 ASP CB HB3 sing N N 75 ASP CG OD1 doub N N 76 ASP CG OD2 sing N N 77 ASP OD2 HD2 sing N N 78 ASP OXT HXT sing N N 79 CYS N CA sing N N 80 CYS N H sing N N 81 CYS N H2 sing N N 82 CYS CA C sing N N 83 CYS CA CB sing N N 84 CYS CA HA sing N N 85 CYS C O doub N N 86 CYS C OXT sing N N 87 CYS CB SG sing N N 88 CYS CB HB2 sing N N 89 CYS CB HB3 sing N N 90 CYS SG HG sing N N 91 CYS OXT HXT sing N N 92 GLN N CA sing N N 93 GLN N H sing N N 94 GLN N H2 sing N N 95 GLN CA C sing N N 96 GLN CA CB sing N N 97 GLN CA HA sing N N 98 GLN C O doub N N 99 GLN C OXT sing N N 100 GLN CB CG sing N N 101 GLN CB HB2 sing N N 102 GLN CB HB3 sing N N 103 GLN CG CD sing N N 104 GLN CG HG2 sing N N 105 GLN CG HG3 sing N N 106 GLN CD OE1 doub N N 107 GLN CD NE2 sing N N 108 GLN NE2 HE21 sing N N 109 GLN NE2 HE22 sing N N 110 GLN OXT HXT sing N N 111 GLU N CA sing N N 112 GLU N H sing N N 113 GLU N H2 sing N N 114 GLU CA C sing N N 115 GLU CA CB sing N N 116 GLU CA HA sing N N 117 GLU C O doub N N 118 GLU C OXT sing N N 119 GLU CB CG sing N N 120 GLU CB HB2 sing N N 121 GLU CB HB3 sing N N 122 GLU CG CD sing N N 123 GLU CG HG2 sing N N 124 GLU CG HG3 sing N N 125 GLU CD OE1 doub N N 126 GLU CD OE2 sing N N 127 GLU OE2 HE2 sing N N 128 GLU OXT HXT sing N N 129 GLY N CA sing N N 130 GLY N H sing N N 131 GLY N H2 sing N N 132 GLY CA C sing N N 133 GLY CA HA2 sing N N 134 GLY CA HA3 sing N N 135 GLY C O doub N N 136 GLY C OXT sing N N 137 GLY OXT HXT sing N N 138 HIS N CA sing N N 139 HIS N H sing N N 140 HIS N H2 sing N N 141 HIS CA C sing N N 142 HIS CA CB sing N N 143 HIS CA HA sing N N 144 HIS C O doub N N 145 HIS C OXT sing N N 146 HIS CB CG sing N N 147 HIS CB HB2 sing N N 148 HIS CB HB3 sing N N 149 HIS CG ND1 sing Y N 150 HIS CG CD2 doub Y N 151 HIS ND1 CE1 doub Y N 152 HIS ND1 HD1 sing N N 153 HIS CD2 NE2 sing Y N 154 HIS CD2 HD2 sing N N 155 HIS CE1 NE2 sing Y N 156 HIS CE1 HE1 sing N N 157 HIS NE2 HE2 sing N N 158 HIS OXT HXT sing N N 159 HOH O H1 sing N N 160 HOH O H2 sing N N 161 ILE N CA sing N N 162 ILE N H sing N N 163 ILE N H2 sing N N 164 ILE CA C sing N N 165 ILE CA CB sing N N 166 ILE CA HA sing N N 167 ILE C O doub N N 168 ILE C OXT sing N N 169 ILE CB CG1 sing N N 170 ILE CB CG2 sing N N 171 ILE CB HB sing N N 172 ILE CG1 CD1 sing N N 173 ILE CG1 HG12 sing N N 174 ILE CG1 HG13 sing N N 175 ILE CG2 HG21 sing N N 176 ILE CG2 HG22 sing N N 177 ILE CG2 HG23 sing N N 178 ILE CD1 HD11 sing N N 179 ILE CD1 HD12 sing N N 180 ILE CD1 HD13 sing N N 181 ILE OXT HXT sing N N 182 LEU N CA sing N N 183 LEU N H sing N N 184 LEU N H2 sing N N 185 LEU CA C sing N N 186 LEU CA CB sing N N 187 LEU CA HA sing N N 188 LEU C O doub N N 189 LEU C OXT sing N N 190 LEU CB CG sing N N 191 LEU CB HB2 sing N N 192 LEU CB HB3 sing N N 193 LEU CG CD1 sing N N 194 LEU CG CD2 sing N N 195 LEU CG HG sing N N 196 LEU CD1 HD11 sing N N 197 LEU CD1 HD12 sing N N 198 LEU CD1 HD13 sing N N 199 LEU CD2 HD21 sing N N 200 LEU CD2 HD22 sing N N 201 LEU CD2 HD23 sing N N 202 LEU OXT HXT sing N N 203 LYS N CA sing N N 204 LYS N H sing N N 205 LYS N H2 sing N N 206 LYS CA C sing N N 207 LYS CA CB sing N N 208 LYS CA HA sing N N 209 LYS C O doub N N 210 LYS C OXT sing N N 211 LYS CB CG sing N N 212 LYS CB HB2 sing N N 213 LYS CB HB3 sing N N 214 LYS CG CD sing N N 215 LYS CG HG2 sing N N 216 LYS CG HG3 sing N N 217 LYS CD CE sing N N 218 LYS CD HD2 sing N N 219 LYS CD HD3 sing N N 220 LYS CE NZ sing N N 221 LYS CE HE2 sing N N 222 LYS CE HE3 sing N N 223 LYS NZ HZ1 sing N N 224 LYS NZ HZ2 sing N N 225 LYS NZ HZ3 sing N N 226 LYS OXT HXT sing N N 227 MET N CA sing N N 228 MET N H sing N N 229 MET N H2 sing N N 230 MET CA C sing N N 231 MET CA CB sing N N 232 MET CA HA sing N N 233 MET C O doub N N 234 MET C OXT sing N N 235 MET CB CG sing N N 236 MET CB HB2 sing N N 237 MET CB HB3 sing N N 238 MET CG SD sing N N 239 MET CG HG2 sing N N 240 MET CG HG3 sing N N 241 MET SD CE sing N N 242 MET CE HE1 sing N N 243 MET CE HE2 sing N N 244 MET CE HE3 sing N N 245 MET OXT HXT sing N N 246 PHE N CA sing N N 247 PHE N H sing N N 248 PHE N H2 sing N N 249 PHE CA C sing N N 250 PHE CA CB sing N N 251 PHE CA HA sing N N 252 PHE C O doub N N 253 PHE C OXT sing N N 254 PHE CB CG sing N N 255 PHE CB HB2 sing N N 256 PHE CB HB3 sing N N 257 PHE CG CD1 doub Y N 258 PHE CG CD2 sing Y N 259 PHE CD1 CE1 sing Y N 260 PHE CD1 HD1 sing N N 261 PHE CD2 CE2 doub Y N 262 PHE CD2 HD2 sing N N 263 PHE CE1 CZ doub Y N 264 PHE CE1 HE1 sing N N 265 PHE CE2 CZ sing Y N 266 PHE CE2 HE2 sing N N 267 PHE CZ HZ sing N N 268 PHE OXT HXT sing N N 269 PRO N CA sing N N 270 PRO N CD sing N N 271 PRO N H sing N N 272 PRO CA C sing N N 273 PRO CA CB sing N N 274 PRO CA HA sing N N 275 PRO C O doub N N 276 PRO C OXT sing N N 277 PRO CB CG sing N N 278 PRO CB HB2 sing N N 279 PRO CB HB3 sing N N 280 PRO CG CD sing N N 281 PRO CG HG2 sing N N 282 PRO CG HG3 sing N N 283 PRO CD HD2 sing N N 284 PRO CD HD3 sing N N 285 PRO OXT HXT sing N N 286 SER N CA sing N N 287 SER N H sing N N 288 SER N H2 sing N N 289 SER CA C sing N N 290 SER CA CB sing N N 291 SER CA HA sing N N 292 SER C O doub N N 293 SER C OXT sing N N 294 SER CB OG sing N N 295 SER CB HB2 sing N N 296 SER CB HB3 sing N N 297 SER OG HG sing N N 298 SER OXT HXT sing N N 299 SO4 S O1 doub N N 300 SO4 S O2 doub N N 301 SO4 S O3 sing N N 302 SO4 S O4 sing N N 303 THR N CA sing N N 304 THR N H sing N N 305 THR N H2 sing N N 306 THR CA C sing N N 307 THR CA CB sing N N 308 THR CA HA sing N N 309 THR C O doub N N 310 THR C OXT sing N N 311 THR CB OG1 sing N N 312 THR CB CG2 sing N N 313 THR CB HB sing N N 314 THR OG1 HG1 sing N N 315 THR CG2 HG21 sing N N 316 THR CG2 HG22 sing N N 317 THR CG2 HG23 sing N N 318 THR OXT HXT sing N N 319 TRP N CA sing N N 320 TRP N H sing N N 321 TRP N H2 sing N N 322 TRP CA C sing N N 323 TRP CA CB sing N N 324 TRP CA HA sing N N 325 TRP C O doub N N 326 TRP C OXT sing N N 327 TRP CB CG sing N N 328 TRP CB HB2 sing N N 329 TRP CB HB3 sing N N 330 TRP CG CD1 doub Y N 331 TRP CG CD2 sing Y N 332 TRP CD1 NE1 sing Y N 333 TRP CD1 HD1 sing N N 334 TRP CD2 CE2 doub Y N 335 TRP CD2 CE3 sing Y N 336 TRP NE1 CE2 sing Y N 337 TRP NE1 HE1 sing N N 338 TRP CE2 CZ2 sing Y N 339 TRP CE3 CZ3 doub Y N 340 TRP CE3 HE3 sing N N 341 TRP CZ2 CH2 doub Y N 342 TRP CZ2 HZ2 sing N N 343 TRP CZ3 CH2 sing Y N 344 TRP CZ3 HZ3 sing N N 345 TRP CH2 HH2 sing N N 346 TRP OXT HXT sing N N 347 TYR N CA sing N N 348 TYR N H sing N N 349 TYR N H2 sing N N 350 TYR CA C sing N N 351 TYR CA CB sing N N 352 TYR CA HA sing N N 353 TYR C O doub N N 354 TYR C OXT sing N N 355 TYR CB CG sing N N 356 TYR CB HB2 sing N N 357 TYR CB HB3 sing N N 358 TYR CG CD1 doub Y N 359 TYR CG CD2 sing Y N 360 TYR CD1 CE1 sing Y N 361 TYR CD1 HD1 sing N N 362 TYR CD2 CE2 doub Y N 363 TYR CD2 HD2 sing N N 364 TYR CE1 CZ doub Y N 365 TYR CE1 HE1 sing N N 366 TYR CE2 CZ sing Y N 367 TYR CE2 HE2 sing N N 368 TYR CZ OH sing N N 369 TYR OH HH sing N N 370 TYR OXT HXT sing N N 371 TYW C O sing N N 372 TYW C CA sing N N 373 TYW C OXT sing N N 374 TYW N CA sing N N 375 TYW CA CB sing N N 376 TYW CB CG sing N N 377 TYW CG CD1 doub Y N 378 TYW CG CD2 sing Y N 379 TYW OH CZ sing N N 380 TYW CZ CE1 doub Y N 381 TYW CZ CE2 sing Y N 382 TYW CD1 CE1 sing Y N 383 TYW CD2 CE2 doub Y N 384 TYW N H sing N N 385 TYW N H2 sing N N 386 TYW CA HA sing N N 387 TYW CB HB sing N N 388 TYW CB HBA sing N N 389 TYW OH HOH sing N N 390 TYW CD1 HD1 sing N N 391 TYW CD2 HD2 sing N N 392 TYW CE1 HE1 sing N N 393 TYW CE2 HE2 sing N N 394 TYW O HO sing N N 395 TYW OXT HXT sing N N 396 TYW C H1 sing N N 397 VAL N CA sing N N 398 VAL N H sing N N 399 VAL N H2 sing N N 400 VAL CA C sing N N 401 VAL CA CB sing N N 402 VAL CA HA sing N N 403 VAL C O doub N N 404 VAL C OXT sing N N 405 VAL CB CG1 sing N N 406 VAL CB CG2 sing N N 407 VAL CB HB sing N N 408 VAL CG1 HG11 sing N N 409 VAL CG1 HG12 sing N N 410 VAL CG1 HG13 sing N N 411 VAL CG2 HG21 sing N N 412 VAL CG2 HG22 sing N N 413 VAL CG2 HG23 sing N N 414 VAL OXT HXT sing N N 415 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3TK9 _pdbx_initial_refinement_model.details 'PDB ENTRY 3TK9' # _atom_sites.entry_id 3TJU _atom_sites.fract_transf_matrix[1][1] 0.015813 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015813 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006907 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_