HEADER TRANSFERASE 25-AUG-11 3TK7 TITLE 2.0 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF TRANSALDOLASE B (TALA) TITLE 2 FROM FRANCISELLA TULARENSIS IN COVALENT COMPLEX WITH FRUCTOSE 6- TITLE 3 PHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSALDOLASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: TRANSALDOLASE B (TALA); COMPND 5 EC: 2.2.1.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FRANCISELLA TULARENSIS SUBSP. TULARENSIS; SOURCE 3 ORGANISM_TAXID: 119856; SOURCE 4 STRAIN: SCHU S4; SOURCE 5 GENE: FTT_1093C, TALA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, ALPHA-BETA BARREL/TIM BARREL, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.H.LIGHT,G.MINASOV,A.S.HALAVATY,L.SHUVALOVA,L.PAPAZISI,W.F.ANDERSON, AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 4 13-SEP-23 3TK7 1 REMARK SEQADV LINK REVDAT 3 08-NOV-17 3TK7 1 REMARK REVDAT 2 05-MAR-14 3TK7 1 JRNL REVDAT 1 07-SEP-11 3TK7 0 JRNL AUTH S.H.LIGHT,G.MINASOV,M.E.DUBAN,W.F.ANDERSON JRNL TITL ADHERENCE TO BURGI-DUNITZ STEREOCHEMICAL PRINCIPLES REQUIRES JRNL TITL 2 SIGNIFICANT STRUCTURAL REARRANGEMENTS IN SCHIFF-BASE JRNL TITL 3 FORMATION: INSIGHTS FROM TRANSALDOLASE COMPLEXES. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 544 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 24531488 JRNL DOI 10.1107/S1399004713030666 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 44965 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2397 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2936 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.2100 REMARK 3 BIN FREE R VALUE SET COUNT : 165 REMARK 3 BIN FREE R VALUE : 0.2620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4978 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 654 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.61000 REMARK 3 B22 (A**2) : 1.35000 REMARK 3 B33 (A**2) : -1.96000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.171 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.109 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.096 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5339 ; 0.007 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3632 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7258 ; 1.188 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9021 ; 0.812 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 701 ; 2.586 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 230 ;32.687 ;25.957 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1050 ;10.044 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ; 9.533 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 863 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5894 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 965 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 79 REMARK 3 ORIGIN FOR THE GROUP (A): -19.6380 -4.8461 44.9469 REMARK 3 T TENSOR REMARK 3 T11: 0.0883 T22: 0.0942 REMARK 3 T33: 0.0653 T12: 0.0168 REMARK 3 T13: -0.0267 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 5.3400 L22: 0.8752 REMARK 3 L33: 1.4588 L12: -0.2552 REMARK 3 L13: -0.5409 L23: -0.1568 REMARK 3 S TENSOR REMARK 3 S11: -0.1567 S12: -0.4553 S13: -0.0529 REMARK 3 S21: 0.1439 S22: 0.0385 S23: -0.0711 REMARK 3 S31: 0.0940 S32: 0.2016 S33: 0.1182 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 80 A 263 REMARK 3 ORIGIN FOR THE GROUP (A): -29.1693 -6.6071 32.5605 REMARK 3 T TENSOR REMARK 3 T11: 0.0164 T22: 0.0385 REMARK 3 T33: 0.0564 T12: -0.0202 REMARK 3 T13: -0.0029 T23: -0.0017 REMARK 3 L TENSOR REMARK 3 L11: 0.7342 L22: 1.0153 REMARK 3 L33: 1.4449 L12: -0.3129 REMARK 3 L13: -0.1218 L23: 0.0262 REMARK 3 S TENSOR REMARK 3 S11: -0.0070 S12: 0.0018 S13: -0.0532 REMARK 3 S21: -0.0306 S22: -0.0453 S23: 0.0469 REMARK 3 S31: 0.0402 S32: -0.0961 S33: 0.0523 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 264 A 321 REMARK 3 ORIGIN FOR THE GROUP (A): -25.8364 -4.8043 24.5681 REMARK 3 T TENSOR REMARK 3 T11: 0.0579 T22: 0.0711 REMARK 3 T33: 0.0854 T12: -0.0128 REMARK 3 T13: 0.0053 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.6902 L22: 0.7215 REMARK 3 L33: 1.4804 L12: -0.3538 REMARK 3 L13: -0.2284 L23: 0.0699 REMARK 3 S TENSOR REMARK 3 S11: -0.0688 S12: -0.0116 S13: 0.0769 REMARK 3 S21: -0.0720 S22: -0.0359 S23: 0.0458 REMARK 3 S31: 0.0519 S32: -0.1085 S33: 0.1047 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 79 REMARK 3 ORIGIN FOR THE GROUP (A): -22.5623 5.9388 -14.5128 REMARK 3 T TENSOR REMARK 3 T11: 0.2515 T22: 0.1872 REMARK 3 T33: 0.0714 T12: 0.0016 REMARK 3 T13: -0.0650 T23: 0.0163 REMARK 3 L TENSOR REMARK 3 L11: 5.0806 L22: 2.2586 REMARK 3 L33: 2.3572 L12: 2.5962 REMARK 3 L13: -0.4123 L23: -0.0691 REMARK 3 S TENSOR REMARK 3 S11: -0.1515 S12: 0.5697 S13: 0.0412 REMARK 3 S21: -0.3841 S22: 0.1173 S23: 0.1378 REMARK 3 S31: -0.0232 S32: -0.2677 S33: 0.0342 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 80 B 263 REMARK 3 ORIGIN FOR THE GROUP (A): -12.4624 2.7048 -2.8375 REMARK 3 T TENSOR REMARK 3 T11: 0.0951 T22: 0.1082 REMARK 3 T33: 0.0532 T12: -0.0113 REMARK 3 T13: 0.0127 T23: 0.0243 REMARK 3 L TENSOR REMARK 3 L11: 0.6927 L22: 1.4935 REMARK 3 L33: 2.1188 L12: 0.3194 REMARK 3 L13: -0.1078 L23: -0.2109 REMARK 3 S TENSOR REMARK 3 S11: -0.0219 S12: 0.0927 S13: 0.0005 REMARK 3 S21: -0.1076 S22: -0.0372 S23: -0.0505 REMARK 3 S31: -0.1097 S32: 0.2511 S33: 0.0590 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 264 B 321 REMARK 3 ORIGIN FOR THE GROUP (A): -17.4466 0.7245 5.1348 REMARK 3 T TENSOR REMARK 3 T11: 0.0714 T22: 0.0687 REMARK 3 T33: 0.0487 T12: -0.0147 REMARK 3 T13: 0.0086 T23: 0.0185 REMARK 3 L TENSOR REMARK 3 L11: 1.0666 L22: 1.2144 REMARK 3 L33: 2.9798 L12: 0.2700 REMARK 3 L13: 0.2686 L23: -0.2936 REMARK 3 S TENSOR REMARK 3 S11: -0.0699 S12: 0.1516 S13: 0.0588 REMARK 3 S21: -0.1536 S22: -0.0149 S23: -0.0107 REMARK 3 S31: -0.1120 S32: 0.0995 S33: 0.0848 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3TK7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000067579. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47501 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.47400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3IGX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 11.2 MG/ML, 0.5 M SODIUM REMARK 280 CHLORIDE, 0.01 M TRIS-HCL (PH 8.3), 0.005 M FRUCTOSE 6-PHOSPHATE REMARK 280 SCREEN: CLASSICS II D6 (QIAGEN), 0.1 M BIS-TRIS, 25% (W/V) PEG REMARK 280 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K, PH 5.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.06150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.49750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.12850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.49750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.06150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.12850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 GLY A -14 REMARK 465 VAL A -13 REMARK 465 ASP A -12 REMARK 465 LEU A -11 REMARK 465 GLY A -10 REMARK 465 THR A -9 REMARK 465 GLU A -8 REMARK 465 ASN A -7 REMARK 465 LEU A -6 REMARK 465 TYR A -5 REMARK 465 PHE A -4 REMARK 465 GLN A -3 REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 MET B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 SER B -16 REMARK 465 SER B -15 REMARK 465 GLY B -14 REMARK 465 VAL B -13 REMARK 465 ASP B -12 REMARK 465 LEU B -11 REMARK 465 GLY B -10 REMARK 465 THR B -9 REMARK 465 GLU B -8 REMARK 465 ASN B -7 REMARK 465 LEU B -6 REMARK 465 TYR B -5 REMARK 465 PHE B -4 REMARK 465 GLN B -3 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 ASP B 271 REMARK 465 ASP B 272 REMARK 465 VAL B 273 REMARK 465 VAL B 274 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 179 76.99 -118.17 REMARK 500 SER A 230 90.62 65.11 REMARK 500 SER B 179 76.69 -117.85 REMARK 500 ASN B 194 55.09 39.42 REMARK 500 SER B 230 100.00 67.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE F6R A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE F6R B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3IGX RELATED DB: PDB REMARK 900 APO STRUCTURE REMARK 900 RELATED ID: 3TE9 RELATED DB: PDB REMARK 900 K135M MUTANT IN COMPLEX WITH F6P REMARK 900 RELATED ID: IDP02095 RELATED DB: TARGETDB REMARK 900 RELATED ID: 4E0C RELATED DB: PDB REMARK 900 RELATED ID: 3TNO RELATED DB: PDB REMARK 900 RELATED ID: 3TKF RELATED DB: PDB DBREF 3TK7 A 1 321 UNP Q5NFX0 Q5NFX0_FRATT 1 321 DBREF 3TK7 B 1 321 UNP Q5NFX0 Q5NFX0_FRATT 1 321 SEQADV 3TK7 MET A -23 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 HIS A -22 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 HIS A -21 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 HIS A -20 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 HIS A -19 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 HIS A -18 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 HIS A -17 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 SER A -16 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 SER A -15 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 GLY A -14 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 VAL A -13 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 ASP A -12 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 LEU A -11 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 GLY A -10 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 THR A -9 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 GLU A -8 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 ASN A -7 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 LEU A -6 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 TYR A -5 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 PHE A -4 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 GLN A -3 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 SER A -2 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 ASN A -1 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 ALA A 0 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 MET B -23 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 HIS B -22 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 HIS B -21 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 HIS B -20 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 HIS B -19 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 HIS B -18 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 HIS B -17 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 SER B -16 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 SER B -15 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 GLY B -14 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 VAL B -13 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 ASP B -12 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 LEU B -11 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 GLY B -10 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 THR B -9 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 GLU B -8 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 ASN B -7 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 LEU B -6 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 TYR B -5 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 PHE B -4 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 GLN B -3 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 SER B -2 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 ASN B -1 UNP Q5NFX0 EXPRESSION TAG SEQADV 3TK7 ALA B 0 UNP Q5NFX0 EXPRESSION TAG SEQRES 1 A 345 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 345 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET GLN SEQRES 3 A 345 LYS SER VAL LEU GLU GLN LEU LYS GLN VAL THR MET VAL SEQRES 4 A 345 VAL ALA ASP THR GLY ASP PHE GLU LEU ILE LYS LYS TYR SEQRES 5 A 345 LYS PRO VAL ASP ALA THR THR ASN PRO SER LEU ILE LEU SEQRES 6 A 345 LYS ALA VAL LYS GLU GLN LYS TYR SER ASN LEU VAL ALA SEQRES 7 A 345 GLU THR ILE SER LYS VAL LYS ALA ASN ASN PRO ASP LEU SEQRES 8 A 345 ASN SER ASP ASP LEU VAL LYS GLU ILE ALA ILE GLU ILE SEQRES 9 A 345 LEU VAL SER PHE GLY ILE LYS ILE LEU ASP VAL ILE GLU SEQRES 10 A 345 GLY LYS VAL SER SER GLU VAL ASP ALA ARG VAL SER PHE SEQRES 11 A 345 ASN SER ALA THR THR ILE ASP TYR ALA LYS ARG ILE ILE SEQRES 12 A 345 ALA ARG TYR GLU SER ASN GLY ILE PRO LYS ASP ARG VAL SEQRES 13 A 345 LEU ILE LYS ILE ALA ALA THR TRP GLU GLY ILE LYS ALA SEQRES 14 A 345 ALA LYS LEU LEU GLN LYS GLU GLY ILE ASN CYS ASN LEU SEQRES 15 A 345 THR LEU ILE PHE ASP LYS ALA GLN ALA LYS ALA CYS ALA SEQRES 16 A 345 GLU ALA GLY VAL TYR LEU VAL SER PRO PHE VAL GLY ARG SEQRES 17 A 345 ILE THR ASP TRP GLN MET GLN GLN ASN ASN LEU LYS THR SEQRES 18 A 345 PHE PRO ALA ILE ALA ASP ASP ASP GLY VAL ASN SER VAL SEQRES 19 A 345 LYS ALA ILE TYR LYS LEU TYR LYS SER HIS GLY PHE LYS SEQRES 20 A 345 THR ILE VAL MET GLY ALA SER PHE ARG ASN VAL GLU GLN SEQRES 21 A 345 VAL ILE ALA LEU ALA GLY CYS ASP ALA LEU THR ILE SER SEQRES 22 A 345 PRO VAL LEU LEU GLU GLU LEU LYS ASN ARG ASP GLU HIS SEQRES 23 A 345 LEU GLU VAL LYS LEU THR LYS ASN ASP ASP VAL VAL THR SEQRES 24 A 345 GLN SER PRO GLN ILE SER GLU ALA ASP PHE ARG TRP LEU SEQRES 25 A 345 MET ASN GLU ASN ALA MET ALA THR HIS LYS LEU ALA GLU SEQRES 26 A 345 GLY ILE ARG LEU PHE THR LYS ASP THR ILE GLU LEU GLU SEQRES 27 A 345 ASN ILE ILE LYS GLN ASN LEU SEQRES 1 B 345 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 345 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET GLN SEQRES 3 B 345 LYS SER VAL LEU GLU GLN LEU LYS GLN VAL THR MET VAL SEQRES 4 B 345 VAL ALA ASP THR GLY ASP PHE GLU LEU ILE LYS LYS TYR SEQRES 5 B 345 LYS PRO VAL ASP ALA THR THR ASN PRO SER LEU ILE LEU SEQRES 6 B 345 LYS ALA VAL LYS GLU GLN LYS TYR SER ASN LEU VAL ALA SEQRES 7 B 345 GLU THR ILE SER LYS VAL LYS ALA ASN ASN PRO ASP LEU SEQRES 8 B 345 ASN SER ASP ASP LEU VAL LYS GLU ILE ALA ILE GLU ILE SEQRES 9 B 345 LEU VAL SER PHE GLY ILE LYS ILE LEU ASP VAL ILE GLU SEQRES 10 B 345 GLY LYS VAL SER SER GLU VAL ASP ALA ARG VAL SER PHE SEQRES 11 B 345 ASN SER ALA THR THR ILE ASP TYR ALA LYS ARG ILE ILE SEQRES 12 B 345 ALA ARG TYR GLU SER ASN GLY ILE PRO LYS ASP ARG VAL SEQRES 13 B 345 LEU ILE LYS ILE ALA ALA THR TRP GLU GLY ILE LYS ALA SEQRES 14 B 345 ALA LYS LEU LEU GLN LYS GLU GLY ILE ASN CYS ASN LEU SEQRES 15 B 345 THR LEU ILE PHE ASP LYS ALA GLN ALA LYS ALA CYS ALA SEQRES 16 B 345 GLU ALA GLY VAL TYR LEU VAL SER PRO PHE VAL GLY ARG SEQRES 17 B 345 ILE THR ASP TRP GLN MET GLN GLN ASN ASN LEU LYS THR SEQRES 18 B 345 PHE PRO ALA ILE ALA ASP ASP ASP GLY VAL ASN SER VAL SEQRES 19 B 345 LYS ALA ILE TYR LYS LEU TYR LYS SER HIS GLY PHE LYS SEQRES 20 B 345 THR ILE VAL MET GLY ALA SER PHE ARG ASN VAL GLU GLN SEQRES 21 B 345 VAL ILE ALA LEU ALA GLY CYS ASP ALA LEU THR ILE SER SEQRES 22 B 345 PRO VAL LEU LEU GLU GLU LEU LYS ASN ARG ASP GLU HIS SEQRES 23 B 345 LEU GLU VAL LYS LEU THR LYS ASN ASP ASP VAL VAL THR SEQRES 24 B 345 GLN SER PRO GLN ILE SER GLU ALA ASP PHE ARG TRP LEU SEQRES 25 B 345 MET ASN GLU ASN ALA MET ALA THR HIS LYS LEU ALA GLU SEQRES 26 B 345 GLY ILE ARG LEU PHE THR LYS ASP THR ILE GLU LEU GLU SEQRES 27 B 345 ASN ILE ILE LYS GLN ASN LEU HET F6R A 501 15 HET F6R B 501 15 HETNAM F6R FRUCTOSE -6-PHOSPHATE FORMUL 3 F6R 2(C6 H13 O9 P) FORMUL 5 HOH *654(H2 O) HELIX 1 1 SER A 4 THR A 13 1 10 HELIX 2 2 ASP A 21 LYS A 29 5 9 HELIX 3 3 ASN A 36 LYS A 45 1 10 HELIX 4 4 GLU A 46 LYS A 48 5 3 HELIX 5 5 TYR A 49 ASN A 64 1 16 HELIX 6 6 ASN A 68 ASP A 90 1 23 HELIX 7 7 ASP A 101 SER A 105 5 5 HELIX 8 8 ASN A 107 ASN A 125 1 19 HELIX 9 9 PRO A 128 ASP A 130 5 3 HELIX 10 10 THR A 139 GLU A 152 1 14 HELIX 11 11 ASP A 163 ALA A 173 1 11 HELIX 12 12 VAL A 182 ASN A 193 1 12 HELIX 13 13 ALA A 200 ASP A 203 5 4 HELIX 14 14 ASP A 204 HIS A 220 1 17 HELIX 15 15 ASN A 233 ALA A 239 1 7 HELIX 16 16 SER A 249 ARG A 259 1 11 HELIX 17 17 SER A 281 ASN A 292 1 12 HELIX 18 18 ASN A 292 GLN A 319 1 28 HELIX 19 19 SER B 4 THR B 13 1 10 HELIX 20 20 ASP B 21 LYS B 26 1 6 HELIX 21 21 LYS B 27 LYS B 29 5 3 HELIX 22 22 ASN B 36 GLU B 46 1 11 HELIX 23 23 TYR B 49 ASN B 64 1 16 HELIX 24 24 ASN B 68 ASP B 90 1 23 HELIX 25 25 ASP B 101 SER B 105 5 5 HELIX 26 26 ASN B 107 ASN B 125 1 19 HELIX 27 27 PRO B 128 ASP B 130 5 3 HELIX 28 28 THR B 139 GLU B 152 1 14 HELIX 29 29 ASP B 163 ALA B 173 1 11 HELIX 30 30 VAL B 182 ASN B 193 1 12 HELIX 31 31 ALA B 200 ASP B 203 5 4 HELIX 32 32 ASP B 204 HIS B 220 1 17 HELIX 33 33 ASN B 233 ALA B 239 1 7 HELIX 34 34 SER B 249 ASN B 258 1 10 HELIX 35 35 SER B 281 ASN B 292 1 12 HELIX 36 36 ASN B 292 GLN B 319 1 28 SHEET 1 A 9 MET A 14 ASP A 18 0 SHEET 2 A 9 ASP A 32 THR A 34 1 O THR A 34 N ALA A 17 SHEET 3 A 9 VAL A 96 GLU A 99 1 O SER A 97 N ALA A 33 SHEET 4 A 9 VAL A 132 ALA A 137 1 O LYS A 135 N SER A 98 SHEET 5 A 9 CYS A 156 ILE A 161 1 O ASN A 157 N ILE A 134 SHEET 6 A 9 LEU A 177 PRO A 180 1 O SER A 179 N LEU A 158 SHEET 7 A 9 ILE A 225 GLY A 228 1 O ILE A 225 N VAL A 178 SHEET 8 A 9 ALA A 245 ILE A 248 1 O THR A 247 N GLY A 228 SHEET 9 A 9 MET A 14 ASP A 18 1 N VAL A 16 O ILE A 248 SHEET 1 B 9 MET B 14 ASP B 18 0 SHEET 2 B 9 ASP B 32 THR B 34 1 O THR B 34 N ALA B 17 SHEET 3 B 9 VAL B 96 GLU B 99 1 O SER B 97 N ALA B 33 SHEET 4 B 9 VAL B 132 ALA B 137 1 O LEU B 133 N VAL B 96 SHEET 5 B 9 CYS B 156 ILE B 161 1 O THR B 159 N ILE B 136 SHEET 6 B 9 LEU B 177 PRO B 180 1 O SER B 179 N LEU B 158 SHEET 7 B 9 ILE B 225 GLY B 228 1 O ILE B 225 N VAL B 178 SHEET 8 B 9 ALA B 245 ILE B 248 1 O THR B 247 N GLY B 228 SHEET 9 B 9 MET B 14 ASP B 18 1 N VAL B 16 O LEU B 246 LINK NZ LYS A 135 C2 F6R A 501 1555 1555 1.26 LINK NZ LYS B 135 C2 F6R B 501 1555 1555 1.28 SITE 1 AC1 17 ASP A 18 THR A 34 ASN A 36 LYS A 135 SITE 2 AC1 17 ASN A 157 THR A 159 SER A 179 PHE A 181 SITE 3 AC1 17 ARG A 184 MET A 227 SER A 230 ARG A 232 SITE 4 AC1 17 HOH A 341 HOH A 373 HOH A 387 HOH A 564 SITE 5 AC1 17 HOH A 663 SITE 1 AC2 17 ASP B 18 THR B 34 THR B 35 ASN B 36 SITE 2 AC2 17 LYS B 135 ASN B 157 THR B 159 SER B 179 SITE 3 AC2 17 PHE B 181 ARG B 184 MET B 227 ALA B 229 SITE 4 AC2 17 SER B 230 ARG B 232 HOH B 413 HOH B 418 SITE 5 AC2 17 HOH B 425 CRYST1 56.123 74.257 164.995 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017818 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013467 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006061 0.00000