HEADER HYDROLASE/ANTIBIOTIC 29-AUG-11 3TLC TITLE MICROCIN C7 SELF IMMUNITY PROTEIN MCCF IN COMPLEX WITH MICROCIN C7 TITLE 2 ANTIBIOTIC COMPND MOL_ID: 1; COMPND 2 MOLECULE: MCCF; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: MCCF; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET19 KEYWDS SERINE PROTEASE, HYDROLASE-ANTIBIOTIC COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR V.AGARWAL,S.K.NAIR REVDAT 6 06-DEC-23 3TLC 1 REMARK REVDAT 5 13-SEP-23 3TLC 1 REMARK SEQADV REVDAT 4 08-NOV-17 3TLC 1 REMARK REVDAT 3 04-APR-12 3TLC 1 JRNL REVDAT 2 28-MAR-12 3TLC 1 JRNL REVDAT 1 29-FEB-12 3TLC 0 JRNL AUTH V.AGARWAL,A.TIKHONOV,A.METLITSKAYA,K.SEVERINOV,S.K.NAIR JRNL TITL STRUCTURE AND FUNCTION OF A SERINE CARBOXYPEPTIDASE ADAPTED JRNL TITL 2 FOR DEGRADATION OF THE PROTEIN SYNTHESIS ANTIBIOTIC MICROCIN JRNL TITL 3 C7. JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 4425 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 22388748 JRNL DOI 10.1073/PNAS.1114224109 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0056 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 156197 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7834 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 10557 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.44 REMARK 3 BIN R VALUE (WORKING SET) : 0.2200 REMARK 3 BIN FREE R VALUE SET COUNT : 551 REMARK 3 BIN FREE R VALUE : 0.2460 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5261 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 78 REMARK 3 SOLVENT ATOMS : 978 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.09000 REMARK 3 B22 (A**2) : 0.36000 REMARK 3 B33 (A**2) : -0.28000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.04000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.053 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.051 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.030 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.684 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5479 ; 0.005 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7424 ; 1.000 ; 1.987 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 672 ; 5.346 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 226 ;33.400 ;23.805 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 940 ;10.509 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;15.430 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 833 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4064 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3342 ; 0.262 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5413 ; 0.537 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2137 ; 0.892 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2009 ; 1.508 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 3TLC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1000067620. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-APR-10 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 156612 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.28200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 3TLA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 8000, 8% ETHYLENE GLYCOL, 0.1 REMARK 280 M HEPES, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 282K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 42.86900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -26 REMARK 465 GLY A -25 REMARK 465 HIS A -24 REMARK 465 HIS A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 SER A -12 REMARK 465 SER A -11 REMARK 465 GLY A -10 REMARK 465 HIS A -9 REMARK 465 ILE A -8 REMARK 465 ASP A -7 REMARK 465 ASP A -6 REMARK 465 ASP A -5 REMARK 465 ASP A -4 REMARK 465 LYS A -3 REMARK 465 HIS A -2 REMARK 465 MET A -1 REMARK 465 LEU A 0 REMARK 465 GLU A 1 REMARK 465 MET A 2 REMARK 465 ILE A 3 REMARK 465 GLN A 4 REMARK 465 SER A 5 REMARK 465 HIS A 6 REMARK 465 THR A 342 REMARK 465 GLU A 343 REMARK 465 LYS A 344 REMARK 465 MET B -26 REMARK 465 GLY B -25 REMARK 465 HIS B -24 REMARK 465 HIS B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 SER B -12 REMARK 465 SER B -11 REMARK 465 GLY B -10 REMARK 465 HIS B -9 REMARK 465 ILE B -8 REMARK 465 ASP B -7 REMARK 465 ASP B -6 REMARK 465 ASP B -5 REMARK 465 ASP B -4 REMARK 465 LYS B -3 REMARK 465 HIS B -2 REMARK 465 MET B -1 REMARK 465 LEU B 0 REMARK 465 GLU B 1 REMARK 465 MET B 2 REMARK 465 ILE B 3 REMARK 465 GLN B 4 REMARK 465 SER B 5 REMARK 465 HIS B 6 REMARK 465 THR B 342 REMARK 465 GLU B 343 REMARK 465 LYS B 344 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU B 192 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 25 -104.93 -145.62 REMARK 500 PHE A 61 -97.98 59.88 REMARK 500 ASP A 93 -16.85 -147.94 REMARK 500 ALA A 118 -128.61 61.59 REMARK 500 SER A 310 -154.81 -166.36 REMARK 500 SER B 25 -103.79 -144.62 REMARK 500 PHE B 61 -95.96 59.96 REMARK 500 ASP B 93 -15.33 -147.50 REMARK 500 ALA B 118 -128.44 61.48 REMARK 500 TRP B 186 -74.61 -81.53 REMARK 500 SER B 310 -155.10 -166.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 7MD A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 7MD B 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3TLA RELATED DB: PDB REMARK 900 RELATED ID: 3TLB RELATED DB: PDB REMARK 900 RELATED ID: 3TLE RELATED DB: PDB REMARK 900 RELATED ID: 3TLG RELATED DB: PDB REMARK 900 RELATED ID: 3TLY RELATED DB: PDB REMARK 900 RELATED ID: 3TLZ RELATED DB: PDB DBREF 3TLC A 2 344 UNP Q2KKH9 Q2KKH9_ECOLX 2 344 DBREF 3TLC B 2 344 UNP Q2KKH9 Q2KKH9_ECOLX 2 344 SEQADV 3TLC MET A -26 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC GLY A -25 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS A -24 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS A -23 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS A -22 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS A -21 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS A -20 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS A -19 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS A -18 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS A -17 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS A -16 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS A -15 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS A -14 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS A -13 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC SER A -12 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC SER A -11 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC GLY A -10 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS A -9 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC ILE A -8 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC ASP A -7 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC ASP A -6 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC ASP A -5 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC ASP A -4 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC LYS A -3 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS A -2 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC MET A -1 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC LEU A 0 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC GLU A 1 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC ALA A 118 UNP Q2KKH9 SER 118 ENGINEERED MUTATION SEQADV 3TLC MET B -26 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC GLY B -25 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS B -24 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS B -23 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS B -22 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS B -21 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS B -20 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS B -19 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS B -18 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS B -17 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS B -16 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS B -15 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS B -14 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS B -13 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC SER B -12 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC SER B -11 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC GLY B -10 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS B -9 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC ILE B -8 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC ASP B -7 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC ASP B -6 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC ASP B -5 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC ASP B -4 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC LYS B -3 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC HIS B -2 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC MET B -1 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC LEU B 0 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC GLU B 1 UNP Q2KKH9 EXPRESSION TAG SEQADV 3TLC ALA B 118 UNP Q2KKH9 SER 118 ENGINEERED MUTATION SEQRES 1 A 371 MET GLY HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 2 A 371 HIS SER SER GLY HIS ILE ASP ASP ASP ASP LYS HIS MET SEQRES 3 A 371 LEU GLU MET ILE GLN SER HIS PRO LEU LEU ALA ALA PRO SEQRES 4 A 371 LEU ALA VAL GLY ASP THR ILE GLY PHE PHE SER SER SER SEQRES 5 A 371 ALA PRO ALA THR VAL THR ALA LYS ASN ARG PHE PHE ARG SEQRES 6 A 371 GLY VAL GLU PHE LEU GLN ARG LYS GLY PHE LYS LEU VAL SEQRES 7 A 371 SER GLY LYS LEU THR GLY LYS THR ASP PHE TYR ARG SER SEQRES 8 A 371 GLY THR ILE LYS GLU ARG ALA GLN GLU PHE ASN GLU LEU SEQRES 9 A 371 VAL TYR ASN PRO ASP ILE THR CYS ILE MET SER THR ILE SEQRES 10 A 371 GLY GLY ASP ASN SER ASN SER LEU LEU PRO PHE LEU ASP SEQRES 11 A 371 TYR ASP ALA ILE ILE ALA ASN PRO LYS ILE ILE ILE GLY SEQRES 12 A 371 TYR ALA ASP THR THR ALA LEU LEU ALA GLY ILE TYR ALA SEQRES 13 A 371 LYS THR GLY LEU ILE THR PHE TYR GLY PRO ALA LEU ILE SEQRES 14 A 371 PRO SER PHE GLY GLU HIS PRO PRO LEU VAL ASP ILE THR SEQRES 15 A 371 TYR GLU SER PHE ILE LYS ILE LEU THR ARG LYS GLN SER SEQRES 16 A 371 GLY ILE TYR THR TYR THR LEU PRO GLU LYS TRP SER ASP SEQRES 17 A 371 GLU SER ILE ASN TRP ASN GLU ASN LYS ILE LEU ARG PRO SEQRES 18 A 371 LYS LYS LEU TYR LYS ASN ASN CYS ALA PHE TYR GLY SER SEQRES 19 A 371 GLY LYS VAL GLU GLY ARG VAL ILE GLY GLY ASN LEU ASN SEQRES 20 A 371 THR LEU THR GLY ILE TRP GLY SER GLU TRP MET PRO GLU SEQRES 21 A 371 ILE ARG ASN GLY ASP ILE LEU PHE ILE GLU ASP SER ARG SEQRES 22 A 371 LYS SER ILE ALA THR VAL GLU ARG LEU PHE SER MET LEU SEQRES 23 A 371 LYS LEU ASN ARG VAL PHE ASP LYS VAL SER ALA ILE ILE SEQRES 24 A 371 LEU GLY LYS HIS GLU LEU PHE ASP CYS ALA GLY SER LYS SEQRES 25 A 371 ARG ARG PRO TYR GLU VAL LEU THR GLU VAL LEU ASP GLY SEQRES 26 A 371 LYS GLN ILE PRO VAL LEU ASP GLY PHE ASP CYS SER HIS SEQRES 27 A 371 THR HIS PRO MET LEU THR LEU PRO LEU GLY VAL LYS LEU SEQRES 28 A 371 ALA ILE ASP PHE ASP ASN LYS ASN ILE SER ILE THR GLU SEQRES 29 A 371 GLN TYR LEU SER THR GLU LYS SEQRES 1 B 371 MET GLY HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 2 B 371 HIS SER SER GLY HIS ILE ASP ASP ASP ASP LYS HIS MET SEQRES 3 B 371 LEU GLU MET ILE GLN SER HIS PRO LEU LEU ALA ALA PRO SEQRES 4 B 371 LEU ALA VAL GLY ASP THR ILE GLY PHE PHE SER SER SER SEQRES 5 B 371 ALA PRO ALA THR VAL THR ALA LYS ASN ARG PHE PHE ARG SEQRES 6 B 371 GLY VAL GLU PHE LEU GLN ARG LYS GLY PHE LYS LEU VAL SEQRES 7 B 371 SER GLY LYS LEU THR GLY LYS THR ASP PHE TYR ARG SER SEQRES 8 B 371 GLY THR ILE LYS GLU ARG ALA GLN GLU PHE ASN GLU LEU SEQRES 9 B 371 VAL TYR ASN PRO ASP ILE THR CYS ILE MET SER THR ILE SEQRES 10 B 371 GLY GLY ASP ASN SER ASN SER LEU LEU PRO PHE LEU ASP SEQRES 11 B 371 TYR ASP ALA ILE ILE ALA ASN PRO LYS ILE ILE ILE GLY SEQRES 12 B 371 TYR ALA ASP THR THR ALA LEU LEU ALA GLY ILE TYR ALA SEQRES 13 B 371 LYS THR GLY LEU ILE THR PHE TYR GLY PRO ALA LEU ILE SEQRES 14 B 371 PRO SER PHE GLY GLU HIS PRO PRO LEU VAL ASP ILE THR SEQRES 15 B 371 TYR GLU SER PHE ILE LYS ILE LEU THR ARG LYS GLN SER SEQRES 16 B 371 GLY ILE TYR THR TYR THR LEU PRO GLU LYS TRP SER ASP SEQRES 17 B 371 GLU SER ILE ASN TRP ASN GLU ASN LYS ILE LEU ARG PRO SEQRES 18 B 371 LYS LYS LEU TYR LYS ASN ASN CYS ALA PHE TYR GLY SER SEQRES 19 B 371 GLY LYS VAL GLU GLY ARG VAL ILE GLY GLY ASN LEU ASN SEQRES 20 B 371 THR LEU THR GLY ILE TRP GLY SER GLU TRP MET PRO GLU SEQRES 21 B 371 ILE ARG ASN GLY ASP ILE LEU PHE ILE GLU ASP SER ARG SEQRES 22 B 371 LYS SER ILE ALA THR VAL GLU ARG LEU PHE SER MET LEU SEQRES 23 B 371 LYS LEU ASN ARG VAL PHE ASP LYS VAL SER ALA ILE ILE SEQRES 24 B 371 LEU GLY LYS HIS GLU LEU PHE ASP CYS ALA GLY SER LYS SEQRES 25 B 371 ARG ARG PRO TYR GLU VAL LEU THR GLU VAL LEU ASP GLY SEQRES 26 B 371 LYS GLN ILE PRO VAL LEU ASP GLY PHE ASP CYS SER HIS SEQRES 27 B 371 THR HIS PRO MET LEU THR LEU PRO LEU GLY VAL LYS LEU SEQRES 28 B 371 ALA ILE ASP PHE ASP ASN LYS ASN ILE SER ILE THR GLU SEQRES 29 B 371 GLN TYR LEU SER THR GLU LYS HET 7MD A 400 35 HET EDO A 500 4 HET 7MD B 400 35 HET EDO B 500 4 HETNAM 7MD 5'-O-[(R)-(3-AMINOPROPOXY)(L-ALPHA-ASPARTYLAMINO) HETNAM 2 7MD PHOSPHORYL]ADENOSINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 7MD 2(C17 H27 N8 O9 P) FORMUL 4 EDO 2(C2 H6 O2) FORMUL 7 HOH *978(H2 O) HELIX 1 1 PRO A 27 ALA A 32 1 6 HELIX 2 2 ALA A 32 LYS A 46 1 15 HELIX 3 3 THR A 66 TYR A 79 1 14 HELIX 4 4 ASN A 94 LEU A 102 5 9 HELIX 5 5 ASP A 103 ASN A 110 1 8 HELIX 6 6 TYR A 117 ASP A 119 5 3 HELIX 7 7 THR A 120 GLY A 132 1 13 HELIX 8 8 ALA A 140 GLY A 146 1 7 HELIX 9 9 PRO A 150 ARG A 165 1 16 HELIX 10 10 LEU A 219 THR A 223 1 5 HELIX 11 11 SER A 248 ASN A 262 1 15 HELIX 12 12 ARG A 263 VAL A 268 1 6 HELIX 13 13 ARG A 287 ASP A 297 1 11 HELIX 14 14 PRO B 27 ALA B 32 1 6 HELIX 15 15 ALA B 32 LYS B 46 1 15 HELIX 16 16 THR B 66 ASN B 80 1 15 HELIX 17 17 ASN B 94 LEU B 102 5 9 HELIX 18 18 ASP B 103 ASN B 110 1 8 HELIX 19 19 TYR B 117 ASP B 119 5 3 HELIX 20 20 THR B 120 GLY B 132 1 13 HELIX 21 21 ALA B 140 GLY B 146 1 7 HELIX 22 22 PRO B 150 ARG B 165 1 16 HELIX 23 23 LEU B 219 THR B 223 1 5 HELIX 24 24 SER B 248 ASN B 262 1 15 HELIX 25 25 ARG B 263 LYS B 267 5 5 HELIX 26 26 ARG B 287 ASP B 297 1 11 SHEET 1 A 6 LYS A 49 SER A 52 0 SHEET 2 A 6 THR A 18 PHE A 22 1 N ILE A 19 O LYS A 49 SHEET 3 A 6 ILE A 83 SER A 88 1 O MET A 87 N GLY A 20 SHEET 4 A 6 ILE A 113 GLY A 116 1 O ILE A 113 N ILE A 86 SHEET 5 A 6 PHE A 136 TYR A 137 1 O PHE A 136 N ILE A 114 SHEET 6 A 6 LEU A 318 PRO A 319 -1 O LEU A 318 N TYR A 137 SHEET 1 B 8 TYR A 171 THR A 172 0 SHEET 2 B 8 ASN A 332 ILE A 335 -1 O ILE A 335 N TYR A 171 SHEET 3 B 8 LYS A 323 ASP A 327 -1 N ALA A 325 O SER A 334 SHEET 4 B 8 LYS A 209 ASN A 218 -1 N VAL A 210 O ILE A 326 SHEET 5 B 8 ILE A 239 GLU A 243 1 O ILE A 239 N ARG A 213 SHEET 6 B 8 ALA A 270 GLY A 274 1 O ILE A 272 N LEU A 240 SHEET 7 B 8 VAL A 303 PHE A 307 1 O LEU A 304 N LEU A 273 SHEET 8 B 8 ALA A 203 TYR A 205 -1 N TYR A 205 O VAL A 303 SHEET 1 C 2 LYS A 178 TRP A 179 0 SHEET 2 C 2 TYR A 198 LYS A 199 -1 O TYR A 198 N TRP A 179 SHEET 1 D 6 LYS B 49 SER B 52 0 SHEET 2 D 6 THR B 18 PHE B 22 1 N ILE B 19 O LYS B 49 SHEET 3 D 6 ILE B 83 SER B 88 1 O MET B 87 N GLY B 20 SHEET 4 D 6 ILE B 113 GLY B 116 1 O ILE B 113 N ILE B 86 SHEET 5 D 6 THR B 135 TYR B 137 1 O PHE B 136 N ILE B 114 SHEET 6 D 6 LEU B 318 LEU B 320 -1 O LEU B 318 N TYR B 137 SHEET 1 E 8 TYR B 171 THR B 172 0 SHEET 2 E 8 ASN B 332 ILE B 335 -1 O ILE B 335 N TYR B 171 SHEET 3 E 8 LYS B 323 ASP B 327 -1 N ALA B 325 O SER B 334 SHEET 4 E 8 LYS B 209 ASN B 218 -1 N VAL B 210 O ILE B 326 SHEET 5 E 8 ILE B 239 GLU B 243 1 O PHE B 241 N ILE B 215 SHEET 6 E 8 ALA B 270 GLY B 274 1 O ILE B 272 N LEU B 240 SHEET 7 E 8 VAL B 303 PHE B 307 1 O LEU B 304 N LEU B 273 SHEET 8 E 8 ALA B 203 TYR B 205 -1 N TYR B 205 O VAL B 303 SHEET 1 F 2 LYS B 178 TRP B 179 0 SHEET 2 F 2 TYR B 198 LYS B 199 -1 O TYR B 198 N TRP B 179 CISPEP 1 PRO A 149 PRO A 150 0 7.46 CISPEP 2 HIS A 313 PRO A 314 0 0.58 CISPEP 3 PRO B 149 PRO B 150 0 7.07 CISPEP 4 HIS B 313 PRO B 314 0 0.07 SITE 1 AC1 19 GLY A 91 GLY A 92 TYR A 117 ASP A 119 SITE 2 AC1 19 SER A 183 TRP A 186 ASN A 218 ASN A 220 SITE 3 AC1 19 THR A 221 ARG A 246 LYS A 247 GLU A 277 SITE 4 AC1 19 HIS A 311 HOH A 349 HOH A 359 HOH A 519 SITE 5 AC1 19 HOH A 598 HOH A 618 ARG B 254 SITE 1 AC2 6 GLU A 243 ASP A 244 GLY A 274 HIS A 276 SITE 2 AC2 6 PRO A 288 HOH A 458 SITE 1 AC3 18 ARG A 254 GLY B 91 GLY B 92 TYR B 117 SITE 2 AC3 18 ASP B 119 SER B 183 TRP B 186 ASN B 218 SITE 3 AC3 18 ASN B 220 THR B 221 ARG B 246 LYS B 247 SITE 4 AC3 18 GLU B 277 HIS B 311 HOH B 354 HOH B 357 SITE 5 AC3 18 HOH B 542 HOH B 983 SITE 1 AC4 6 GLU B 243 ASP B 244 GLY B 274 HIS B 276 SITE 2 AC4 6 PRO B 288 HOH B 432 CRYST1 54.317 85.738 72.962 90.00 101.34 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018410 0.000000 0.003693 0.00000 SCALE2 0.000000 0.011663 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013979 0.00000