HEADER SPLICING 07-SEP-11 3TP2 TITLE CRYSTAL STRUCTURE OF THE SPLICING FACTOR CWC2 FROM YEAST COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRE-MRNA-SPLICING FACTOR CWC2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1-227; COMPND 5 SYNONYM: PRP19-ASSOCIATED COMPLEX PROTEIN 40; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: CWC2, NTC40, SLC3, YDL209C, D1041; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETM11 KEYWDS RNA SCAFFOLD, TORUS DOMAIN, CCCH ZINC FINGER, RRM DOMAIN, SPLICING EXPDTA X-RAY DIFFRACTION AUTHOR J.SCHMITZOVA REVDAT 4 28-FEB-24 3TP2 1 REMARK SEQADV LINK REVDAT 3 16-MAY-12 3TP2 1 JRNL REVDAT 2 04-APR-12 3TP2 1 JRNL REVDAT 1 14-MAR-12 3TP2 0 JRNL AUTH J.SCHMITZOVA,N.RASCHE,O.DYBKOV,K.KRAMER,P.FABRIZIO,H.URLAUB, JRNL AUTH 2 R.LUHRMANN,V.PENA JRNL TITL CRYSTAL STRUCTURE OF CWC2 REVEALS A NOVEL ARCHITECTURE OF A JRNL TITL 2 MULTIPARTITE RNA-BINDING PROTEIN. JRNL REF EMBO J. V. 31 2222 2012 JRNL REFN ISSN 0261-4189 JRNL PMID 22407296 JRNL DOI 10.1038/EMBOJ.2012.58 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.26 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 21530 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1077 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1495 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2240 REMARK 3 BIN FREE R VALUE SET COUNT : 79 REMARK 3 BIN FREE R VALUE : 0.3060 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3466 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 176 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.03 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.63000 REMARK 3 B22 (A**2) : 1.38000 REMARK 3 B33 (A**2) : -0.75000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.426 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.263 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.177 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.678 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.917 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.894 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3548 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4772 ; 0.927 ; 1.945 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 430 ; 4.870 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 176 ;35.179 ;23.693 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 625 ;12.827 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;13.661 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 489 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2724 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2141 ; 0.414 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3416 ; 0.796 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1407 ; 1.060 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1356 ; 1.852 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 227 REMARK 3 ORIGIN FOR THE GROUP (A): 44.8970 41.1250 20.4880 REMARK 3 T TENSOR REMARK 3 T11: 0.0341 T22: 0.0603 REMARK 3 T33: 0.0623 T12: 0.0033 REMARK 3 T13: -0.0160 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 1.5206 L22: 0.9325 REMARK 3 L33: 2.3978 L12: -0.0350 REMARK 3 L13: 0.1179 L23: 0.1478 REMARK 3 S TENSOR REMARK 3 S11: -0.0532 S12: -0.0423 S13: 0.0684 REMARK 3 S21: -0.1399 S22: -0.0304 S23: 0.0598 REMARK 3 S31: 0.1208 S32: 0.0296 S33: 0.0836 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 227 REMARK 3 ORIGIN FOR THE GROUP (A): 15.8570 41.9280 46.2340 REMARK 3 T TENSOR REMARK 3 T11: 0.0316 T22: 0.1052 REMARK 3 T33: 0.0627 T12: -0.0358 REMARK 3 T13: 0.0126 T23: -0.0255 REMARK 3 L TENSOR REMARK 3 L11: 1.6254 L22: 1.2241 REMARK 3 L33: 2.5706 L12: 0.1838 REMARK 3 L13: 0.6228 L23: 0.2047 REMARK 3 S TENSOR REMARK 3 S11: -0.1545 S12: 0.2237 S13: -0.0415 REMARK 3 S21: 0.0972 S22: 0.0582 S23: -0.0514 REMARK 3 S31: -0.0596 S32: 0.1017 S33: 0.0963 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3TP2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1000067745. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27711 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 47.264 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.42700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.510 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHARP, SOLOMON REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG5000 MME, AMMONIUM SULFATE, MES, PH REMARK 280 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.35000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.90000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.85000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.90000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.35000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.85000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 GLY B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 LYS B 116 REMARK 465 PHE B 117 REMARK 465 ALA B 118 REMARK 465 ASP B 119 REMARK 465 TYR B 120 REMARK 465 ARG B 121 REMARK 465 GLU B 122 REMARK 465 ASP B 123 REMARK 465 MET B 124 REMARK 465 GLY B 125 REMARK 465 GLY B 126 REMARK 465 ILE B 127 REMARK 465 GLY B 128 REMARK 465 SER B 129 REMARK 465 PHE B 130 REMARK 465 ARG B 131 REMARK 465 LYS B 132 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 14 CG CD CE NZ REMARK 470 LYS B 133 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 159 OD2 ASP A 209 2.18 REMARK 500 O HOH A 230 O HOH A 326 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NA NA A 228 NA NA B 228 2664 1.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 21 62.12 61.63 REMARK 500 HIS A 91 63.34 -115.66 REMARK 500 MET A 124 70.45 34.42 REMARK 500 PRO B 19 42.42 -93.46 REMARK 500 SER B 20 -61.59 64.04 REMARK 500 HIS B 91 68.55 -116.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 229 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 73 SG REMARK 620 2 CYS A 81 SG 114.9 REMARK 620 3 CYS A 87 SG 107.7 121.8 REMARK 620 4 HIS A 91 NE2 112.8 98.6 99.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 229 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 73 SG REMARK 620 2 CYS B 81 SG 111.4 REMARK 620 3 CYS B 87 SG 111.5 120.6 REMARK 620 4 HIS B 91 NE2 110.0 104.8 97.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 228 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 285 O REMARK 620 2 HOH B 296 O 80.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 228 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 229 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 228 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 229 DBREF 3TP2 A 1 227 UNP Q12046 CWC2_YEAST 1 227 DBREF 3TP2 B 1 227 UNP Q12046 CWC2_YEAST 1 227 SEQADV 3TP2 GLY A -1 UNP Q12046 EXPRESSION TAG SEQADV 3TP2 ALA A 0 UNP Q12046 EXPRESSION TAG SEQADV 3TP2 GLY B -1 UNP Q12046 EXPRESSION TAG SEQADV 3TP2 ALA B 0 UNP Q12046 EXPRESSION TAG SEQRES 1 A 229 GLY ALA MET THR SER TRP ARG ASP LYS SER ALA LYS VAL SEQRES 2 A 229 GLN VAL LYS GLU SER GLU LEU PRO SER SER ILE PRO ALA SEQRES 3 A 229 GLN THR GLY LEU THR PHE ASN ILE TRP TYR ASN LYS TRP SEQRES 4 A 229 SER GLN GLY PHE ALA GLY ASN THR ARG PHE VAL SER PRO SEQRES 5 A 229 PHE ALA LEU GLN PRO GLN LEU HIS SER GLY LYS THR ARG SEQRES 6 A 229 GLY ASP ASN ASP GLY GLN LEU PHE PHE CYS LEU PHE PHE SEQRES 7 A 229 ALA LYS GLY MET CYS CYS LEU GLY PRO LYS CYS GLU TYR SEQRES 8 A 229 LEU HIS HIS ILE PRO ASP GLU GLU ASP ILE GLY LYS LEU SEQRES 9 A 229 ALA LEU ARG THR GLU VAL LEU ASP CYS PHE GLY ARG GLU SEQRES 10 A 229 LYS PHE ALA ASP TYR ARG GLU ASP MET GLY GLY ILE GLY SEQRES 11 A 229 SER PHE ARG LYS LYS ASN LYS THR LEU TYR VAL GLY GLY SEQRES 12 A 229 ILE ASP GLY ALA LEU ASN SER LYS HIS LEU LYS PRO ALA SEQRES 13 A 229 GLN ILE GLU SER ARG ILE ARG PHE VAL PHE SER ARG LEU SEQRES 14 A 229 GLY ASP ILE ASP ARG ILE ARG TYR VAL GLU SER LYS ASN SEQRES 15 A 229 CYS GLY PHE VAL LYS PHE LYS TYR GLN ALA ASN ALA GLU SEQRES 16 A 229 PHE ALA LYS GLU ALA MET SER ASN GLN THR LEU LEU LEU SEQRES 17 A 229 PRO SER ASP LYS GLU TRP ASP ASP ARG ARG GLU GLY THR SEQRES 18 A 229 GLY LEU LEU VAL LYS TRP ALA ASN SEQRES 1 B 229 GLY ALA MET THR SER TRP ARG ASP LYS SER ALA LYS VAL SEQRES 2 B 229 GLN VAL LYS GLU SER GLU LEU PRO SER SER ILE PRO ALA SEQRES 3 B 229 GLN THR GLY LEU THR PHE ASN ILE TRP TYR ASN LYS TRP SEQRES 4 B 229 SER GLN GLY PHE ALA GLY ASN THR ARG PHE VAL SER PRO SEQRES 5 B 229 PHE ALA LEU GLN PRO GLN LEU HIS SER GLY LYS THR ARG SEQRES 6 B 229 GLY ASP ASN ASP GLY GLN LEU PHE PHE CYS LEU PHE PHE SEQRES 7 B 229 ALA LYS GLY MET CYS CYS LEU GLY PRO LYS CYS GLU TYR SEQRES 8 B 229 LEU HIS HIS ILE PRO ASP GLU GLU ASP ILE GLY LYS LEU SEQRES 9 B 229 ALA LEU ARG THR GLU VAL LEU ASP CYS PHE GLY ARG GLU SEQRES 10 B 229 LYS PHE ALA ASP TYR ARG GLU ASP MET GLY GLY ILE GLY SEQRES 11 B 229 SER PHE ARG LYS LYS ASN LYS THR LEU TYR VAL GLY GLY SEQRES 12 B 229 ILE ASP GLY ALA LEU ASN SER LYS HIS LEU LYS PRO ALA SEQRES 13 B 229 GLN ILE GLU SER ARG ILE ARG PHE VAL PHE SER ARG LEU SEQRES 14 B 229 GLY ASP ILE ASP ARG ILE ARG TYR VAL GLU SER LYS ASN SEQRES 15 B 229 CYS GLY PHE VAL LYS PHE LYS TYR GLN ALA ASN ALA GLU SEQRES 16 B 229 PHE ALA LYS GLU ALA MET SER ASN GLN THR LEU LEU LEU SEQRES 17 B 229 PRO SER ASP LYS GLU TRP ASP ASP ARG ARG GLU GLY THR SEQRES 18 B 229 GLY LEU LEU VAL LYS TRP ALA ASN HET NA A 228 1 HET ZN A 229 1 HET NA B 228 1 HET ZN B 229 1 HETNAM NA SODIUM ION HETNAM ZN ZINC ION FORMUL 3 NA 2(NA 1+) FORMUL 4 ZN 2(ZN 2+) FORMUL 7 HOH *176(H2 O) HELIX 1 1 SER A 3 LYS A 7 5 5 HELIX 2 2 LYS A 14 LEU A 18 5 5 HELIX 3 3 GLY A 27 GLY A 40 1 14 HELIX 4 4 GLN A 54 SER A 59 1 6 HELIX 5 5 THR A 62 ASP A 67 1 6 HELIX 6 6 CYS A 73 LYS A 78 1 6 HELIX 7 7 LEU A 83 CYS A 87 5 5 HELIX 8 8 ASP A 95 THR A 106 1 12 HELIX 9 9 GLY A 128 ASN A 134 1 7 HELIX 10 10 GLY A 141 LEU A 146 1 6 HELIX 11 11 LYS A 152 SER A 165 1 14 HELIX 12 12 ARG A 166 GLY A 168 5 3 HELIX 13 13 GLU A 177 LYS A 179 5 3 HELIX 14 14 TYR A 188 SER A 200 1 13 HELIX 15 15 GLU A 211 GLY A 218 5 8 HELIX 16 16 SER B 3 LYS B 7 5 5 HELIX 17 17 LYS B 14 LEU B 18 5 5 HELIX 18 18 LEU B 28 GLY B 40 1 13 HELIX 19 19 GLN B 54 SER B 59 1 6 HELIX 20 20 CYS B 73 LYS B 78 1 6 HELIX 21 21 LEU B 83 CYS B 87 5 5 HELIX 22 22 ASP B 95 THR B 106 1 12 HELIX 23 23 GLY B 141 LEU B 146 1 6 HELIX 24 24 LYS B 152 ARG B 166 1 15 HELIX 25 25 TYR B 188 SER B 200 1 13 HELIX 26 26 GLU B 211 GLY B 218 5 8 SHEET 1 A 4 ILE A 170 VAL A 176 0 SHEET 2 A 4 CYS A 181 PHE A 186 -1 O LYS A 185 N ASP A 171 SHEET 3 A 4 THR A 136 GLY A 140 -1 N VAL A 139 O GLY A 182 SHEET 4 A 4 LEU A 222 TRP A 225 -1 O LEU A 222 N GLY A 140 SHEET 1 B 4 ILE B 170 VAL B 176 0 SHEET 2 B 4 CYS B 181 PHE B 186 -1 O LYS B 185 N ASP B 171 SHEET 3 B 4 THR B 136 GLY B 140 -1 N VAL B 139 O GLY B 182 SHEET 4 B 4 LEU B 222 TRP B 225 -1 O LEU B 222 N GLY B 140 LINK SG CYS A 73 ZN ZN A 229 1555 1555 2.32 LINK SG CYS A 81 ZN ZN A 229 1555 1555 2.28 LINK SG CYS A 87 ZN ZN A 229 1555 1555 2.33 LINK NE2 HIS A 91 ZN ZN A 229 1555 1555 2.08 LINK SG CYS B 73 ZN ZN B 229 1555 1555 2.33 LINK SG CYS B 81 ZN ZN B 229 1555 1555 2.31 LINK SG CYS B 87 ZN ZN B 229 1555 1555 2.22 LINK NE2 HIS B 91 ZN ZN B 229 1555 1555 2.09 LINK NA NA B 228 O HOH B 285 1555 1555 2.72 LINK NA NA B 228 O HOH B 296 1555 1555 3.06 CISPEP 1 MET A 124 GLY A 125 0 0.97 SITE 1 AC1 3 THR A 29 ALA B 24 NA B 228 SITE 1 AC2 4 CYS A 73 CYS A 81 CYS A 87 HIS A 91 SITE 1 AC3 5 THR A 29 NA A 228 THR B 29 HOH B 285 SITE 2 AC3 5 HOH B 296 SITE 1 AC4 4 CYS B 73 CYS B 81 CYS B 87 HIS B 91 CRYST1 58.700 79.700 113.800 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017036 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012547 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008787 0.00000