HEADER TRANSFERASE 09-SEP-11 3TQG TITLE STRUCTURE OF THE 2-METHYLCITRATE SYNTHASE (PRPC) FROM COXIELLA TITLE 2 BURNETII COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-METHYLCITRATE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.3.3.5; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COXIELLA BURNETII; SOURCE 3 ORGANISM_TAXID: 777; SOURCE 4 STRAIN: RSA 493 NINE MILE PHASE I; SOURCE 5 GENE: CBU_0772, PRPC; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS ENERGY METABOLISM, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.C.FRANKLIN,J.CHEUNG,M.RUDOLPH,M.CASSIDY,E.GARY,F.BURSHTEYN,J.LOVE REVDAT 6 09-OCT-24 3TQG 1 REMARK REVDAT 5 06-DEC-23 3TQG 1 REMARK REVDAT 4 13-SEP-23 3TQG 1 SEQADV LINK REVDAT 3 20-JAN-16 3TQG 1 JRNL REVDAT 2 24-JUN-15 3TQG 1 JRNL REVDAT 1 28-SEP-11 3TQG 0 JRNL AUTH M.C.FRANKLIN,J.CHEUNG,M.J.RUDOLPH,F.BURSHTEYN,M.CASSIDY, JRNL AUTH 2 E.GARY,B.HILLERICH,Z.K.YAO,P.R.CARLIER,M.TOTROV,J.D.LOVE JRNL TITL STRUCTURAL GENOMICS FOR DRUG DESIGN AGAINST THE PATHOGEN JRNL TITL 2 COXIELLA BURNETII. JRNL REF PROTEINS V. 83 2124 2015 JRNL REFN ISSN 0887-3585 JRNL PMID 26033498 JRNL DOI 10.1002/PROT.24841 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.6 REMARK 3 NUMBER OF REFLECTIONS : 29348 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1524 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1748 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE SET COUNT : 92 REMARK 3 BIN FREE R VALUE : 0.4020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5683 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 430 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.34000 REMARK 3 B22 (A**2) : 2.83000 REMARK 3 B33 (A**2) : -1.49000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.291 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.199 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.629 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.884 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5813 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3954 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7877 ; 1.114 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9625 ; 0.857 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 720 ; 5.348 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 264 ;38.414 ;23.712 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 989 ;15.486 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;17.463 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 868 ; 0.062 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6472 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1190 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3600 ; 0.337 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1450 ; 0.072 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5773 ; 0.643 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2213 ; 1.051 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2104 ; 1.622 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 355 4 REMARK 3 1 B 1 B 355 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 4534 ; 0.41 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 4534 ; 0.33 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 356 A 372 4 REMARK 3 1 B 356 B 372 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 2 B (A): 261 ; 0.51 ; 0.50 REMARK 3 MEDIUM THERMAL 2 B (A**2): 261 ; 0.30 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 355 REMARK 3 RESIDUE RANGE : B 356 B 372 REMARK 3 ORIGIN FOR THE GROUP (A): 9.8769 -7.9316 96.2935 REMARK 3 T TENSOR REMARK 3 T11: 0.0761 T22: 0.0858 REMARK 3 T33: 0.0225 T12: 0.0282 REMARK 3 T13: 0.0075 T23: -0.0233 REMARK 3 L TENSOR REMARK 3 L11: 1.3832 L22: 0.8815 REMARK 3 L33: 1.6431 L12: -0.0124 REMARK 3 L13: 0.5221 L23: 0.3341 REMARK 3 S TENSOR REMARK 3 S11: -0.0246 S12: -0.1965 S13: 0.1557 REMARK 3 S21: 0.1346 S22: 0.0357 S23: -0.0267 REMARK 3 S31: -0.1457 S32: -0.0479 S33: -0.0111 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 11 B 355 REMARK 3 RESIDUE RANGE : A 356 A 372 REMARK 3 ORIGIN FOR THE GROUP (A): 5.3791 1.0275 61.9097 REMARK 3 T TENSOR REMARK 3 T11: 0.0395 T22: 0.0570 REMARK 3 T33: 0.0592 T12: -0.0073 REMARK 3 T13: -0.0038 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 1.7334 L22: 1.2042 REMARK 3 L33: 1.2836 L12: 0.1275 REMARK 3 L13: 0.3949 L23: -0.5870 REMARK 3 S TENSOR REMARK 3 S11: -0.0400 S12: 0.0423 S13: 0.3113 REMARK 3 S21: 0.0488 S22: -0.0268 S23: 0.0646 REMARK 3 S31: -0.1601 S32: -0.0535 S33: 0.0668 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3TQG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1000067794. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29397 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.7 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.38400 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB CODE 3HWK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M NACL, 20% PEG 3350, PH 7.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.67700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.94900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.13950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.94900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.67700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.13950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CHAINS A AND B REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 LYS A 3 REMARK 465 THR A 4 REMARK 465 ALA A 5 REMARK 465 LYS A 6 REMARK 465 GLY A 7 REMARK 465 LEU A 8 REMARK 465 ARG A 9 REMARK 465 GLY A 10 REMARK 465 GLN A 11 REMARK 465 SER A 12 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 THR B 2 REMARK 465 LYS B 3 REMARK 465 THR B 4 REMARK 465 ALA B 5 REMARK 465 LYS B 6 REMARK 465 GLY B 7 REMARK 465 LEU B 8 REMARK 465 ARG B 9 REMARK 465 GLY B 10 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 24 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR B 43 O HOH B 388 1.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 24 42.23 -100.97 REMARK 500 LYS A 55 153.78 178.04 REMARK 500 HIS A 183 63.45 -162.04 REMARK 500 GLU A 184 -160.33 57.32 REMARK 500 LYS A 249 -29.37 65.62 REMARK 500 ARG B 31 43.89 38.79 REMARK 500 ASN B 110 -134.51 56.06 REMARK 500 GLU B 115 -63.70 -24.24 REMARK 500 HIS B 183 54.55 -156.32 REMARK 500 GLU B 184 -150.36 56.82 REMARK 500 HIS B 218 -50.98 -121.14 REMARK 500 LYS B 249 25.79 47.98 REMARK 500 VAL B 259 -58.61 -121.18 REMARK 500 ASN B 280 46.04 -100.81 REMARK 500 ASP B 283 53.48 -101.98 REMARK 500 REMARK 500 REMARK: NULL DBREF 3TQG A 1 372 UNP Q83DG4 Q83DG4_COXBU 1 372 DBREF 3TQG B 1 372 UNP Q83DG4 Q83DG4_COXBU 1 372 SEQADV 3TQG SER A -2 UNP Q83DG4 EXPRESSION TAG SEQADV 3TQG ASN A -1 UNP Q83DG4 EXPRESSION TAG SEQADV 3TQG ALA A 0 UNP Q83DG4 EXPRESSION TAG SEQADV 3TQG SER B -2 UNP Q83DG4 EXPRESSION TAG SEQADV 3TQG ASN B -1 UNP Q83DG4 EXPRESSION TAG SEQADV 3TQG ALA B 0 UNP Q83DG4 EXPRESSION TAG SEQRES 1 A 375 SER ASN ALA MSE THR LYS THR ALA LYS GLY LEU ARG GLY SEQRES 2 A 375 GLN SER ALA GLY GLU THR SER ILE ALA THR VAL GLY LYS SEQRES 3 A 375 GLU GLY HIS GLY LEU THR TYR ARG GLY TYR ARG ILE GLU SEQRES 4 A 375 ASP LEU ALA ALA ASN ALA THR PHE GLU GLU VAL ALA TYR SEQRES 5 A 375 LEU LEU LEU LYS ASN LYS LEU PRO THR LYS SER GLU LEU SEQRES 6 A 375 ASP ALA TYR THR LYS LYS LEU VAL ASN LEU ARG SER LEU SEQRES 7 A 375 PRO PRO ALA LEU LYS ASP THR LEU GLU ARG ILE PRO ALA SEQRES 8 A 375 SER SER HIS PRO MSE ASP VAL MSE ARG THR GLY CYS SER SEQRES 9 A 375 MSE LEU GLY ASN LEU GLU PRO GLU ASN GLY PHE GLU ASN SEQRES 10 A 375 GLU GLN ASN ILE ALA ASP ARG LEU VAL ALA ILE PHE PRO SEQRES 11 A 375 ALA ILE GLN CYS TYR TRP TYR HIS TYR SER HIS HIS GLY SEQRES 12 A 375 LYS ARG ILE ASP THR GLU LEU ASP ASP LEU THR LEU ALA SEQRES 13 A 375 GLY TYR PHE LEU HIS LEU LEU LEU GLY LYS LYS ALA ALA SEQRES 14 A 375 GLN MSE ALA ILE ASP CYS MSE ASN ALA SER LEU ILE LEU SEQRES 15 A 375 TYR ALA GLU HIS GLU PHE ASN ALA SER THR PHE ALA ALA SEQRES 16 A 375 ARG VAL CYS SER ALA THR LEU SER ASP ILE TYR SER ALA SEQRES 17 A 375 VAL THR ALA ALA ILE ALA THR LEU ARG GLY PRO LEU HIS SEQRES 18 A 375 GLY GLY ALA ASN GLU ALA ALA MSE ASP LEU ILE MSE LEU SEQRES 19 A 375 TYR LYS THR PRO SER GLU ALA ILE ALA GLY ILE LYS ARG SEQRES 20 A 375 LYS LEU ALA ASN LYS GLU LEU ILE MSE GLY PHE GLY HIS SEQRES 21 A 375 ALA VAL TYR ARG GLU ARG ASP PRO ARG ASN ALA ILE ILE SEQRES 22 A 375 LYS SER TRP ALA GLN LYS LEU ALA PRO ASN ALA ALA ASP SEQRES 23 A 375 GLY TYR LEU PHE ASP ILE SER ASP ALA ILE GLU ASN THR SEQRES 24 A 375 MSE GLN ASP GLU LYS LYS LEU PHE PRO ASN LEU ASP PHE SEQRES 25 A 375 TYR SER ALA THR ALA TYR HIS PHE LEU ASN ILE PRO THR SEQRES 26 A 375 LYS LEU PHE THR PRO ILE PHE VAL MSE SER ARG VAL THR SEQRES 27 A 375 GLY TRP CYS ALA HIS ILE PHE GLU GLN ARG LYS ASP ASN SEQRES 28 A 375 ARG ILE ILE ARG PRO ASN ALA ASP TYR ILE GLY PRO GLU SEQRES 29 A 375 GLU GLN GLY TRP VAL PRO ILE GLU LYS ARG ARG SEQRES 1 B 375 SER ASN ALA MSE THR LYS THR ALA LYS GLY LEU ARG GLY SEQRES 2 B 375 GLN SER ALA GLY GLU THR SER ILE ALA THR VAL GLY LYS SEQRES 3 B 375 GLU GLY HIS GLY LEU THR TYR ARG GLY TYR ARG ILE GLU SEQRES 4 B 375 ASP LEU ALA ALA ASN ALA THR PHE GLU GLU VAL ALA TYR SEQRES 5 B 375 LEU LEU LEU LYS ASN LYS LEU PRO THR LYS SER GLU LEU SEQRES 6 B 375 ASP ALA TYR THR LYS LYS LEU VAL ASN LEU ARG SER LEU SEQRES 7 B 375 PRO PRO ALA LEU LYS ASP THR LEU GLU ARG ILE PRO ALA SEQRES 8 B 375 SER SER HIS PRO MSE ASP VAL MSE ARG THR GLY CYS SER SEQRES 9 B 375 MSE LEU GLY ASN LEU GLU PRO GLU ASN GLY PHE GLU ASN SEQRES 10 B 375 GLU GLN ASN ILE ALA ASP ARG LEU VAL ALA ILE PHE PRO SEQRES 11 B 375 ALA ILE GLN CYS TYR TRP TYR HIS TYR SER HIS HIS GLY SEQRES 12 B 375 LYS ARG ILE ASP THR GLU LEU ASP ASP LEU THR LEU ALA SEQRES 13 B 375 GLY TYR PHE LEU HIS LEU LEU LEU GLY LYS LYS ALA ALA SEQRES 14 B 375 GLN MSE ALA ILE ASP CYS MSE ASN ALA SER LEU ILE LEU SEQRES 15 B 375 TYR ALA GLU HIS GLU PHE ASN ALA SER THR PHE ALA ALA SEQRES 16 B 375 ARG VAL CYS SER ALA THR LEU SER ASP ILE TYR SER ALA SEQRES 17 B 375 VAL THR ALA ALA ILE ALA THR LEU ARG GLY PRO LEU HIS SEQRES 18 B 375 GLY GLY ALA ASN GLU ALA ALA MSE ASP LEU ILE MSE LEU SEQRES 19 B 375 TYR LYS THR PRO SER GLU ALA ILE ALA GLY ILE LYS ARG SEQRES 20 B 375 LYS LEU ALA ASN LYS GLU LEU ILE MSE GLY PHE GLY HIS SEQRES 21 B 375 ALA VAL TYR ARG GLU ARG ASP PRO ARG ASN ALA ILE ILE SEQRES 22 B 375 LYS SER TRP ALA GLN LYS LEU ALA PRO ASN ALA ALA ASP SEQRES 23 B 375 GLY TYR LEU PHE ASP ILE SER ASP ALA ILE GLU ASN THR SEQRES 24 B 375 MSE GLN ASP GLU LYS LYS LEU PHE PRO ASN LEU ASP PHE SEQRES 25 B 375 TYR SER ALA THR ALA TYR HIS PHE LEU ASN ILE PRO THR SEQRES 26 B 375 LYS LEU PHE THR PRO ILE PHE VAL MSE SER ARG VAL THR SEQRES 27 B 375 GLY TRP CYS ALA HIS ILE PHE GLU GLN ARG LYS ASP ASN SEQRES 28 B 375 ARG ILE ILE ARG PRO ASN ALA ASP TYR ILE GLY PRO GLU SEQRES 29 B 375 GLU GLN GLY TRP VAL PRO ILE GLU LYS ARG ARG MODRES 3TQG MSE A 93 MET SELENOMETHIONINE MODRES 3TQG MSE A 96 MET SELENOMETHIONINE MODRES 3TQG MSE A 102 MET SELENOMETHIONINE MODRES 3TQG MSE A 168 MET SELENOMETHIONINE MODRES 3TQG MSE A 173 MET SELENOMETHIONINE MODRES 3TQG MSE A 226 MET SELENOMETHIONINE MODRES 3TQG MSE A 230 MET SELENOMETHIONINE MODRES 3TQG MSE A 253 MET SELENOMETHIONINE MODRES 3TQG MSE A 297 MET SELENOMETHIONINE MODRES 3TQG MSE A 331 MET SELENOMETHIONINE MODRES 3TQG MSE B 93 MET SELENOMETHIONINE MODRES 3TQG MSE B 96 MET SELENOMETHIONINE MODRES 3TQG MSE B 102 MET SELENOMETHIONINE MODRES 3TQG MSE B 168 MET SELENOMETHIONINE MODRES 3TQG MSE B 173 MET SELENOMETHIONINE MODRES 3TQG MSE B 226 MET SELENOMETHIONINE MODRES 3TQG MSE B 230 MET SELENOMETHIONINE MODRES 3TQG MSE B 253 MET SELENOMETHIONINE MODRES 3TQG MSE B 297 MET SELENOMETHIONINE MODRES 3TQG MSE B 331 MET SELENOMETHIONINE HET MSE A 93 8 HET MSE A 96 8 HET MSE A 102 8 HET MSE A 168 8 HET MSE A 173 8 HET MSE A 226 8 HET MSE A 230 8 HET MSE A 253 8 HET MSE A 297 8 HET MSE A 331 8 HET MSE B 93 8 HET MSE B 96 8 HET MSE B 102 8 HET MSE B 168 8 HET MSE B 173 8 HET MSE B 226 8 HET MSE B 230 8 HET MSE B 253 8 HET MSE B 297 8 HET MSE B 331 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 20(C5 H11 N O2 SE) FORMUL 3 HOH *430(H2 O) HELIX 1 1 ILE A 35 ALA A 42 1 8 HELIX 2 2 THR A 43 ASN A 54 1 12 HELIX 3 3 THR A 58 ASN A 71 1 14 HELIX 4 4 PRO A 76 ARG A 85 1 10 HELIX 5 5 HIS A 91 GLU A 107 1 17 HELIX 6 6 GLY A 111 GLU A 113 5 3 HELIX 7 7 ASN A 114 GLY A 140 1 27 HELIX 8 8 THR A 151 GLY A 162 1 12 HELIX 9 9 ALA A 166 ALA A 181 1 16 HELIX 10 10 ASN A 186 ALA A 197 1 12 HELIX 11 11 ASP A 201 ARG A 214 1 14 HELIX 12 12 GLY A 215 GLY A 220 1 6 HELIX 13 13 GLY A 220 MSE A 230 1 11 HELIX 14 14 THR A 234 ASN A 248 1 15 HELIX 15 15 ASP A 264 ALA A 278 1 15 HELIX 16 16 GLY A 284 LYS A 302 1 19 HELIX 17 17 ASN A 306 LEU A 318 1 13 HELIX 18 18 PRO A 321 LYS A 323 5 3 HELIX 19 19 LEU A 324 ASP A 347 1 24 HELIX 20 20 PRO A 367 ARG A 371 5 5 HELIX 21 21 ILE B 35 ALA B 42 1 8 HELIX 22 22 THR B 43 ASN B 54 1 12 HELIX 23 23 THR B 58 ASN B 71 1 14 HELIX 24 24 PRO B 76 GLU B 84 1 9 HELIX 25 25 HIS B 91 GLU B 107 1 17 HELIX 26 26 GLY B 111 GLU B 113 5 3 HELIX 27 27 ASN B 114 GLY B 140 1 27 HELIX 28 28 THR B 151 GLY B 162 1 12 HELIX 29 29 ALA B 166 ALA B 181 1 16 HELIX 30 30 ASN B 186 ALA B 197 1 12 HELIX 31 31 ASP B 201 ARG B 214 1 14 HELIX 32 32 GLY B 220 MSE B 230 1 11 HELIX 33 33 THR B 234 ASN B 248 1 15 HELIX 34 34 ASP B 264 ALA B 278 1 15 HELIX 35 35 GLY B 284 LYS B 302 1 19 HELIX 36 36 ASN B 306 LEU B 318 1 13 HELIX 37 37 PRO B 321 LYS B 323 5 3 HELIX 38 38 LEU B 324 ASP B 347 1 24 HELIX 39 39 PRO B 367 ARG B 371 5 5 SHEET 1 A 2 GLU A 15 THR A 16 0 SHEET 2 A 2 ASP B 356 TYR B 357 1 O ASP B 356 N THR A 16 SHEET 1 B 3 ALA A 19 VAL A 21 0 SHEET 2 B 3 LEU A 28 TYR A 30 -1 O THR A 29 N THR A 20 SHEET 3 B 3 TYR A 33 ARG A 34 -1 O TYR A 33 N TYR A 30 SHEET 1 C 2 ASN A 354 TYR A 357 0 SHEET 2 C 2 SER B 12 THR B 16 1 O ALA B 13 N ASN A 354 SHEET 1 D 3 ALA B 19 THR B 20 0 SHEET 2 D 3 THR B 29 TYR B 30 -1 O THR B 29 N THR B 20 SHEET 3 D 3 TYR B 33 ARG B 34 -1 O TYR B 33 N TYR B 30 LINK C PRO A 92 N MSE A 93 1555 1555 1.32 LINK C MSE A 93 N ASP A 94 1555 1555 1.34 LINK C VAL A 95 N MSE A 96 1555 1555 1.34 LINK C MSE A 96 N ARG A 97 1555 1555 1.33 LINK C SER A 101 N MSE A 102 1555 1555 1.33 LINK C MSE A 102 N LEU A 103 1555 1555 1.34 LINK C GLN A 167 N MSE A 168 1555 1555 1.33 LINK C MSE A 168 N ALA A 169 1555 1555 1.33 LINK C CYS A 172 N MSE A 173 1555 1555 1.33 LINK C MSE A 173 N ASN A 174 1555 1555 1.33 LINK C ALA A 225 N MSE A 226 1555 1555 1.33 LINK C MSE A 226 N ASP A 227 1555 1555 1.34 LINK C ILE A 229 N MSE A 230 1555 1555 1.33 LINK C MSE A 230 N LEU A 231 1555 1555 1.33 LINK C ILE A 252 N MSE A 253 1555 1555 1.33 LINK C MSE A 253 N GLY A 254 1555 1555 1.33 LINK C THR A 296 N MSE A 297 1555 1555 1.32 LINK C MSE A 297 N GLN A 298 1555 1555 1.33 LINK C VAL A 330 N MSE A 331 1555 1555 1.33 LINK C MSE A 331 N SER A 332 1555 1555 1.34 LINK C PRO B 92 N MSE B 93 1555 1555 1.33 LINK C MSE B 93 N ASP B 94 1555 1555 1.34 LINK C VAL B 95 N MSE B 96 1555 1555 1.33 LINK C MSE B 96 N ARG B 97 1555 1555 1.33 LINK C SER B 101 N MSE B 102 1555 1555 1.33 LINK C MSE B 102 N LEU B 103 1555 1555 1.33 LINK C GLN B 167 N MSE B 168 1555 1555 1.34 LINK C MSE B 168 N ALA B 169 1555 1555 1.33 LINK C CYS B 172 N MSE B 173 1555 1555 1.33 LINK C MSE B 173 N ASN B 174 1555 1555 1.32 LINK C ALA B 225 N MSE B 226 1555 1555 1.33 LINK C MSE B 226 N ASP B 227 1555 1555 1.34 LINK C ILE B 229 N MSE B 230 1555 1555 1.33 LINK C MSE B 230 N LEU B 231 1555 1555 1.33 LINK C ILE B 252 N MSE B 253 1555 1555 1.33 LINK C MSE B 253 N GLY B 254 1555 1555 1.33 LINK C THR B 296 N MSE B 297 1555 1555 1.33 LINK C MSE B 297 N GLN B 298 1555 1555 1.33 LINK C VAL B 330 N MSE B 331 1555 1555 1.34 LINK C MSE B 331 N SER B 332 1555 1555 1.33 CRYST1 59.354 82.279 145.898 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016848 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012154 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006854 0.00000