HEADER OXIDOREDUCTASE 09-SEP-11 3TQH TITLE STRUCTURE OF THE QUINONE OXIDOREDUCTASE FROM COXIELLA BURNETII COMPND MOL_ID: 1; COMPND 2 MOLECULE: QUINONE OXIDOREDUCTASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.6.5.5; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COXIELLA BURNETII; SOURCE 3 ORGANISM_TAXID: 777; SOURCE 4 STRAIN: RSA 493 NINE MILE PHASE I; SOURCE 5 GENE: CBU_1023; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS QUINONE OXIDOREDUCTASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.C.FRANKLIN,J.CHEUNG,M.RUDOLPH,M.CASSIDY,E.GARY,F.BURSHTEYN,J.LOVE REVDAT 4 30-OCT-24 3TQH 1 REMARK SEQADV LINK REVDAT 3 20-JAN-16 3TQH 1 JRNL REVDAT 2 24-JUN-15 3TQH 1 JRNL REVDAT 1 28-SEP-11 3TQH 0 JRNL AUTH M.C.FRANKLIN,J.CHEUNG,M.J.RUDOLPH,F.BURSHTEYN,M.CASSIDY, JRNL AUTH 2 E.GARY,B.HILLERICH,Z.K.YAO,P.R.CARLIER,M.TOTROV,J.D.LOVE JRNL TITL STRUCTURAL GENOMICS FOR DRUG DESIGN AGAINST THE PATHOGEN JRNL TITL 2 COXIELLA BURNETII. JRNL REF PROTEINS V. 83 2124 2015 JRNL REFN ISSN 0887-3585 JRNL PMID 26033498 JRNL DOI 10.1002/PROT.24841 REMARK 2 REMARK 2 RESOLUTION. 2.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 12518 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 595 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.44 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.50 REMARK 3 REFLECTION IN BIN (WORKING SET) : 864 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.02 REMARK 3 BIN R VALUE (WORKING SET) : 0.2070 REMARK 3 BIN FREE R VALUE SET COUNT : 48 REMARK 3 BIN FREE R VALUE : 0.2740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2422 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 123 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.38000 REMARK 3 B22 (A**2) : -0.38000 REMARK 3 B33 (A**2) : 0.77000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.294 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.199 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.912 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.931 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.876 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2522 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1680 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3420 ; 1.115 ; 2.002 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4145 ; 0.831 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 316 ; 5.899 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 100 ;37.788 ;25.100 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 445 ;13.194 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;19.382 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 398 ; 0.061 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2742 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 458 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1570 ; 0.266 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 648 ; 0.047 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2528 ; 0.551 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 952 ; 0.999 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 892 ; 1.668 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 134 REMARK 3 RESIDUE RANGE : A 286 A 318 REMARK 3 ORIGIN FOR THE GROUP (A): 30.6690 6.0749 66.0451 REMARK 3 T TENSOR REMARK 3 T11: 0.0493 T22: 0.0723 REMARK 3 T33: 0.0562 T12: 0.0243 REMARK 3 T13: 0.0081 T23: 0.0389 REMARK 3 L TENSOR REMARK 3 L11: 2.9659 L22: 3.2229 REMARK 3 L33: 3.0211 L12: -0.4684 REMARK 3 L13: -0.6729 L23: 1.7629 REMARK 3 S TENSOR REMARK 3 S11: 0.0418 S12: 0.0372 S13: -0.1008 REMARK 3 S21: -0.0861 S22: 0.0176 S23: -0.2340 REMARK 3 S31: 0.1834 S32: 0.2517 S33: -0.0594 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 135 A 285 REMARK 3 RESIDUE RANGE : A 500 A 500 REMARK 3 ORIGIN FOR THE GROUP (A): 7.1836 7.0881 75.5984 REMARK 3 T TENSOR REMARK 3 T11: 0.0098 T22: 0.0329 REMARK 3 T33: 0.0605 T12: -0.0060 REMARK 3 T13: -0.0043 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 2.1276 L22: 2.1582 REMARK 3 L33: 3.0942 L12: -0.1669 REMARK 3 L13: -0.7043 L23: -0.3459 REMARK 3 S TENSOR REMARK 3 S11: -0.0138 S12: 0.0100 S13: -0.0210 REMARK 3 S21: 0.0888 S22: -0.0404 S23: 0.1617 REMARK 3 S31: 0.0648 S32: -0.1935 S33: 0.0541 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3TQH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1000067795. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-AUG-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 2.440 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 49.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.10600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 14.50 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CITRIC ACID 2.4 M AMMONIUM REMARK 280 SULFATE, PH 5.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 110.56100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 26.45550 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 26.45550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 165.84150 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 26.45550 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 26.45550 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 55.28050 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 26.45550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 26.45550 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 165.84150 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 26.45550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 26.45550 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 55.28050 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 110.56100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 103 5.61 -163.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 319 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 320 DBREF 3TQH A 1 318 UNP Q83CT0 Q83CT0_COXBU 1 318 SEQADV 3TQH SER A -2 UNP Q83CT0 EXPRESSION TAG SEQADV 3TQH ASN A -1 UNP Q83CT0 EXPRESSION TAG SEQADV 3TQH ALA A 0 UNP Q83CT0 EXPRESSION TAG SEQRES 1 A 321 SER ASN ALA MSE LYS GLU MSE LYS ALA ILE GLN PHE ASP SEQRES 2 A 321 GLN PHE GLY PRO PRO LYS VAL LEU LYS LEU VAL ASP THR SEQRES 3 A 321 PRO THR PRO GLU TYR ARG LYS ASN GLN MSE LEU ILE LYS SEQRES 4 A 321 VAL HIS ALA ALA SER LEU ASN PRO ILE ASP TYR LYS THR SEQRES 5 A 321 ARG ASN GLY SER GLY PHE VAL ALA LYS LYS LEU LYS ASN SEQRES 6 A 321 ASN LEU PRO SER GLY LEU GLY TYR ASP PHE SER GLY GLU SEQRES 7 A 321 VAL ILE GLU LEU GLY SER ASP VAL ASN ASN VAL ASN ILE SEQRES 8 A 321 GLY ASP LYS VAL MSE GLY ILE ALA GLY PHE PRO ASP HIS SEQRES 9 A 321 PRO CYS CYS TYR ALA GLU TYR VAL CYS ALA SER PRO ASP SEQRES 10 A 321 THR ILE ILE GLN LYS LEU GLU LYS LEU SER PHE LEU GLN SEQRES 11 A 321 ALA ALA SER LEU PRO THR ALA GLY LEU THR ALA LEU GLN SEQRES 12 A 321 ALA LEU ASN GLN ALA GLU VAL LYS GLN GLY ASP VAL VAL SEQRES 13 A 321 LEU ILE HIS ALA GLY ALA GLY GLY VAL GLY HIS LEU ALA SEQRES 14 A 321 ILE GLN LEU ALA LYS GLN LYS GLY THR THR VAL ILE THR SEQRES 15 A 321 THR ALA SER LYS ARG ASN HIS ALA PHE LEU LYS ALA LEU SEQRES 16 A 321 GLY ALA GLU GLN CYS ILE ASN TYR HIS GLU GLU ASP PHE SEQRES 17 A 321 LEU LEU ALA ILE SER THR PRO VAL ASP ALA VAL ILE ASP SEQRES 18 A 321 LEU VAL GLY GLY ASP VAL GLY ILE GLN SER ILE ASP CYS SEQRES 19 A 321 LEU LYS GLU THR GLY CYS ILE VAL SER VAL PRO THR ILE SEQRES 20 A 321 THR ALA GLY ARG VAL ILE GLU VAL ALA LYS GLN LYS HIS SEQRES 21 A 321 ARG ARG ALA PHE GLY LEU LEU LYS GLN PHE ASN ILE GLU SEQRES 22 A 321 GLU LEU HIS TYR LEU GLY LYS LEU VAL SER GLU ASP LYS SEQRES 23 A 321 LEU ARG ILE GLU ILE SER ARG ILE PHE GLN LEU SER GLU SEQRES 24 A 321 ALA VAL THR ALA HIS GLU LEU LEU GLU THR GLY HIS VAL SEQRES 25 A 321 ARG GLY LYS LEU VAL PHE LYS VAL ARG MODRES 3TQH MSE A 4 MET SELENOMETHIONINE MODRES 3TQH MSE A 33 MET SELENOMETHIONINE MODRES 3TQH MSE A 93 MET SELENOMETHIONINE HET MSE A 4 8 HET MSE A 33 8 HET MSE A 93 8 HET NDP A 500 48 HET SO4 A 319 5 HET SO4 A 320 5 HETNAM MSE SELENOMETHIONINE HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE HETNAM SO4 SULFATE ION FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 NDP C21 H30 N7 O17 P3 FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *123(H2 O) HELIX 1 1 PRO A 14 LYS A 16 5 3 HELIX 2 2 ASN A 43 ASN A 51 1 9 HELIX 3 3 GLY A 54 LYS A 61 1 8 HELIX 4 4 SER A 112 ASP A 114 5 3 HELIX 5 5 SER A 124 LEU A 131 1 8 HELIX 6 6 LEU A 131 ALA A 145 1 15 HELIX 7 7 GLY A 160 LYS A 173 1 14 HELIX 8 8 SER A 182 ARG A 184 5 3 HELIX 9 9 ASN A 185 GLY A 193 1 9 HELIX 10 10 ASP A 204 ILE A 209 1 6 HELIX 11 11 GLY A 221 ILE A 229 1 9 HELIX 12 12 THR A 245 LYS A 256 1 12 HELIX 13 13 ASN A 268 GLU A 281 1 14 HELIX 14 14 GLN A 293 SER A 295 5 3 HELIX 15 15 GLU A 296 THR A 306 1 11 SHEET 1 A 2 GLU A 3 PHE A 9 0 SHEET 2 A 2 LEU A 18 PRO A 24 -1 O VAL A 21 N ALA A 6 SHEET 1 B 5 TYR A 108 ALA A 111 0 SHEET 2 B 5 MSE A 33 SER A 41 -1 N ILE A 35 O VAL A 109 SHEET 3 B 5 ASP A 71 LEU A 79 -1 O GLU A 75 N LYS A 36 SHEET 4 B 5 LYS A 91 ILE A 95 -1 O VAL A 92 N GLY A 74 SHEET 5 B 5 ILE A 116 GLN A 118 -1 O ILE A 117 N MSE A 93 SHEET 1 C 4 TYR A 108 ALA A 111 0 SHEET 2 C 4 MSE A 33 SER A 41 -1 N ILE A 35 O VAL A 109 SHEET 3 C 4 LYS A 312 LYS A 316 -1 O PHE A 315 N ALA A 40 SHEET 4 C 4 ILE A 288 PHE A 292 1 N PHE A 292 O VAL A 314 SHEET 1 D 6 GLN A 196 ASN A 199 0 SHEET 2 D 6 THR A 176 ALA A 181 1 N THR A 179 O ILE A 198 SHEET 3 D 6 VAL A 152 ILE A 155 1 N VAL A 153 O ILE A 178 SHEET 4 D 6 VAL A 213 ASP A 218 1 O ILE A 217 N LEU A 154 SHEET 5 D 6 LEU A 232 SER A 240 1 O VAL A 239 N VAL A 216 SHEET 6 D 6 ARG A 259 PHE A 261 1 O PHE A 261 N ILE A 238 LINK C GLU A 3 N MSE A 4 1555 1555 1.33 LINK C MSE A 4 N LYS A 5 1555 1555 1.33 LINK C GLN A 32 N MSE A 33 1555 1555 1.33 LINK C MSE A 33 N LEU A 34 1555 1555 1.33 LINK C VAL A 92 N MSE A 93 1555 1555 1.33 LINK C MSE A 93 N GLY A 94 1555 1555 1.33 CISPEP 1 LEU A 64 PRO A 65 0 1.75 CISPEP 2 PHE A 98 PRO A 99 0 -2.95 SITE 1 AC1 32 PRO A 44 LYS A 48 THR A 137 ALA A 157 SITE 2 AC1 32 ALA A 159 GLY A 160 GLY A 161 VAL A 162 SITE 3 AC1 32 THR A 180 ALA A 181 SER A 182 ASN A 185 SITE 4 AC1 32 TYR A 200 LEU A 219 VAL A 241 THR A 243 SITE 5 AC1 32 LEU A 263 LEU A 264 LYS A 265 GLY A 307 SITE 6 AC1 32 HIS A 308 VAL A 309 SO4 A 319 HOH A 322 SITE 7 AC1 32 HOH A 323 HOH A 324 HOH A 325 HOH A 328 SITE 8 AC1 32 HOH A 336 HOH A 347 HOH A 364 HOH A 403 SITE 1 AC2 8 ILE A 45 LYS A 48 PRO A 242 THR A 243 SITE 2 AC2 8 HOH A 331 HOH A 341 HOH A 432 NDP A 500 SITE 1 AC3 4 SER A 124 PHE A 125 LEU A 126 HOH A 371 CRYST1 52.911 52.911 221.122 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018900 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018900 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004522 0.00000