HEADER STRUCTURAL PROTEIN 11-SEP-11 3TRY TITLE CRYSTAL STRUCTURE OF RACEMIC VILLIN HEADPIECE SUBDOMAIN IN SPACE GROUP TITLE 2 I-4C2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: D-VILLIN-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HEADPIECE SUBDOMAIN (UNP RESIDUES 792-826); COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 4 ORGANISM_COMMON: CHICKEN; SOURCE 5 ORGANISM_TAXID: 9031; SOURCE 6 OTHER_DETAILS: SYNTHESIZED USING FMOC-PROTECTED D-AMINO ACIDS KEYWDS RACEMATE, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.E.MORTENSON,K.A.SATYSHUR,S.H.GELLMAN,K.T.FOREST REVDAT 5 06-DEC-23 3TRY 1 REMARK REVDAT 4 13-SEP-23 3TRY 1 REMARK SEQADV LINK REVDAT 3 22-FEB-12 3TRY 1 JRNL REVDAT 2 08-FEB-12 3TRY 1 JRNL REVDAT 1 25-JAN-12 3TRY 0 JRNL AUTH D.E.MORTENSON,K.A.SATYSHUR,I.A.GUZEI,K.T.FOREST,S.H.GELLMAN JRNL TITL QUASIRACEMIC CRYSTALLIZATION AS A TOOL TO ASSESS THE JRNL TITL 2 ACCOMMODATION OF NONCANONICAL RESIDUES IN NATIVELIKE PROTEIN JRNL TITL 3 CONFORMATIONS. JRNL REF J.AM.CHEM.SOC. V. 134 2473 2012 JRNL REFN ISSN 0002-7863 JRNL PMID 22280019 JRNL DOI 10.1021/JA210045S REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.32 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 1694 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.500 REMARK 3 FREE R VALUE TEST SET COUNT : 79 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 5 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 474 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.46 REMARK 3 BIN R VALUE (WORKING SET) : 0.2670 REMARK 3 BIN FREE R VALUE SET COUNT : 16 REMARK 3 BIN FREE R VALUE : 0.2620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 277 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 3 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04000 REMARK 3 B22 (A**2) : -0.04000 REMARK 3 B33 (A**2) : 0.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.339 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.223 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.119 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.248 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 287 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 383 ; 1.750 ; 2.579 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 33 ; 3.718 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 13 ;30.075 ;24.615 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 1 ;11.171 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 39 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 206 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 168 ; 0.412 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 265 ; 0.851 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 119 ; 1.385 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 118 ; 2.472 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3TRY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1000067846. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 5.75 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : BRUKER MICROSTAR AXS OPTICS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER SMART 6000 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SAINT V7.68A, PROTEUM PLUS PLUS REMARK 200 DATA SCALING SOFTWARE : SAINT REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 1772 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 22.319 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 17.58 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.12590 REMARK 200 FOR THE DATA SET : 16.3900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 16.21 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.31220 REMARK 200 FOR SHELL : 8.580 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1YRF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M AMMONIUM SULFATE, 6% REMARK 280 ISOPROPANOL, PH 5.75, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I -4 c 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 Y,-X,-Z REMARK 290 4555 -Y,X,-Z REMARK 290 5555 X,-Y,Z+1/2 REMARK 290 6555 -X,Y,Z+1/2 REMARK 290 7555 Y,X,-Z+1/2 REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 Y+1/2,-X+1/2,-Z+1/2 REMARK 290 12555 -Y+1/2,X+1/2,-Z+1/2 REMARK 290 13555 X+1/2,-Y+1/2,Z REMARK 290 14555 -X+1/2,Y+1/2,Z REMARK 290 15555 Y+1/2,X+1/2,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 19.56750 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 19.56750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 19.56750 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 19.56750 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 31.56400 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 31.56400 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 19.56750 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 31.56400 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 31.56400 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 19.56750 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 31.56400 REMARK 290 SMTRY2 11 -1.000000 0.000000 0.000000 31.56400 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 19.56750 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 31.56400 REMARK 290 SMTRY2 12 1.000000 0.000000 0.000000 31.56400 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 19.56750 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 31.56400 REMARK 290 SMTRY2 13 0.000000 -1.000000 0.000000 31.56400 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 31.56400 REMARK 290 SMTRY2 14 0.000000 1.000000 0.000000 31.56400 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 31.56400 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 31.56400 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 31.56400 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 31.56400 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DPN A 35 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DAR A 14 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 DAR A 14 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 36 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3TJW RELATED DB: PDB REMARK 900 RELATED ID: 3TRV RELATED DB: PDB REMARK 900 RELATED ID: 3TRW RELATED DB: PDB DBREF 3TRY A 1 35 UNP P02640 VILI_CHICK 792 826 SEQADV 3TRY DHI A 27 UNP P02640 ASN 818 ENGINEERED MUTATION SEQRES 1 A 35 DLE DSN DAS DGL DAS DPN DLY DAL DVA DPN GLY MED DTH SEQRES 2 A 35 DAR DSN DAL DPN DAL DSG DLE DPR DLE DTR DLY DGN DGN SEQRES 3 A 35 DHI DLE DLY DLY DGL DLY GLY DLE DPN HET DLE A 1 8 HET DSN A 2 6 HET DAS A 3 8 HET DGL A 4 9 HET DAS A 5 8 HET DPN A 6 11 HET DLY A 7 9 HET DAL A 8 5 HET DVA A 9 7 HET DPN A 10 11 HET MED A 12 8 HET DTH A 13 7 HET DAR A 14 11 HET DSN A 15 6 HET DAL A 16 5 HET DPN A 17 11 HET DAL A 18 5 HET DSG A 19 8 HET DLE A 20 8 HET DPR A 21 7 HET DLE A 22 8 HET DTR A 23 14 HET DLY A 24 9 HET DGN A 25 9 HET DGN A 26 9 HET DHI A 27 10 HET DLE A 28 8 HET DLY A 29 9 HET DLY A 30 9 HET DGL A 31 9 HET DLY A 32 9 HET DLE A 34 8 HET SO4 A 36 5 HETNAM DLE D-LEUCINE HETNAM DSN D-SERINE HETNAM DAS D-ASPARTIC ACID HETNAM DGL D-GLUTAMIC ACID HETNAM DPN D-PHENYLALANINE HETNAM DLY D-LYSINE HETNAM DAL D-ALANINE HETNAM DVA D-VALINE HETNAM MED D-METHIONINE HETNAM DTH D-THREONINE HETNAM DAR D-ARGININE HETNAM DSG D-ASPARAGINE HETNAM DPR D-PROLINE HETNAM DTR D-TRYPTOPHAN HETNAM DGN D-GLUTAMINE HETNAM DHI D-HISTIDINE HETNAM SO4 SULFATE ION FORMUL 1 DLE 5(C6 H13 N O2) FORMUL 1 DSN 2(C3 H7 N O3) FORMUL 1 DAS 2(C4 H7 N O4) FORMUL 1 DGL 2(C5 H9 N O4) FORMUL 1 DPN 3(C9 H11 N O2) FORMUL 1 DLY 5(C6 H14 N2 O2) FORMUL 1 DAL 3(C3 H7 N O2) FORMUL 1 DVA C5 H11 N O2 FORMUL 1 MED C5 H11 N O2 S FORMUL 1 DTH C4 H9 N O3 FORMUL 1 DAR C6 H15 N4 O2 1+ FORMUL 1 DSG C4 H8 N2 O3 FORMUL 1 DPR C5 H9 N O2 FORMUL 1 DTR C11 H12 N2 O2 FORMUL 1 DGN 2(C5 H10 N2 O3) FORMUL 1 DHI C6 H10 N3 O2 1+ FORMUL 2 SO4 O4 S 2- FORMUL 3 HOH *3(H2 O) HELIX 1 1 DSN A 2 GLY A 11 1 10 HELIX 2 2 DTH A 13 DSG A 19 1 7 HELIX 3 3 DPR A 21 GLY A 33 1 13 LINK C DLE A 1 N DSN A 2 1555 1555 1.33 LINK C DSN A 2 N DAS A 3 1555 1555 1.34 LINK C DAS A 3 N DGL A 4 1555 1555 1.32 LINK C DGL A 4 N DAS A 5 1555 1555 1.33 LINK C DAS A 5 N DPN A 6 1555 1555 1.33 LINK C DPN A 6 N DLY A 7 1555 1555 1.33 LINK C DLY A 7 N DAL A 8 1555 1555 1.33 LINK C DAL A 8 N DVA A 9 1555 1555 1.33 LINK C DVA A 9 N DPN A 10 1555 1555 1.33 LINK C DPN A 10 N GLY A 11 1555 1555 1.33 LINK C GLY A 11 N MED A 12 1555 1555 1.33 LINK C MED A 12 N DTH A 13 1555 1555 1.33 LINK C DTH A 13 N DAR A 14 1555 1555 1.33 LINK C DAR A 14 N DSN A 15 1555 1555 1.33 LINK C DSN A 15 N DAL A 16 1555 1555 1.33 LINK C DAL A 16 N DPN A 17 1555 1555 1.33 LINK C DPN A 17 N DAL A 18 1555 1555 1.33 LINK C DAL A 18 N DSG A 19 1555 1555 1.33 LINK C DSG A 19 N DLE A 20 1555 1555 1.33 LINK C DLE A 20 N DPR A 21 1555 1555 1.35 LINK C DPR A 21 N DLE A 22 1555 1555 1.33 LINK C DLE A 22 N DTR A 23 1555 1555 1.33 LINK C DTR A 23 N DLY A 24 1555 1555 1.33 LINK C DLY A 24 N DGN A 25 1555 1555 1.33 LINK C DGN A 25 N DGN A 26 1555 1555 1.33 LINK C DGN A 26 N DHI A 27 1555 1555 1.33 LINK C DHI A 27 N DLE A 28 1555 1555 1.33 LINK C DLE A 28 N DLY A 29 1555 1555 1.33 LINK C DLY A 29 N DLY A 30 1555 1555 1.33 LINK C DLY A 30 N DGL A 31 1555 1555 1.33 LINK C DGL A 31 N DLY A 32 1555 1555 1.33 LINK C DLY A 32 N GLY A 33 1555 1555 1.33 LINK C GLY A 33 N DLE A 34 1555 1555 1.33 SITE 1 AC1 5 DAS A 3 DTH A 13 DAR A 14 DSN A 15 SITE 2 AC1 5 DTR A 23 CRYST1 63.128 63.128 39.135 90.00 90.00 90.00 I -4 c 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015841 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015841 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025553 0.00000 HETATM 1 N DLE A 1 8.741 -13.380 15.716 1.00 19.63 N HETATM 2 CA DLE A 1 9.959 -14.211 15.558 1.00 19.32 C HETATM 3 CB DLE A 1 10.017 -14.796 14.148 1.00 19.61 C HETATM 4 CG DLE A 1 10.383 -13.792 13.062 1.00 20.49 C HETATM 5 CD1 DLE A 1 10.102 -14.391 11.689 1.00 20.94 C HETATM 6 CD2 DLE A 1 11.834 -13.336 13.168 1.00 21.22 C HETATM 7 C DLE A 1 9.811 -15.378 16.458 1.00 18.91 C HETATM 8 O DLE A 1 8.703 -15.889 16.638 1.00 19.46 O HETATM 9 N DSN A 2 10.926 -15.832 17.016 1.00 18.21 N HETATM 10 CA DSN A 2 10.962 -17.077 17.771 1.00 17.64 C HETATM 11 C DSN A 2 10.863 -18.253 16.831 1.00 17.61 C HETATM 12 O DSN A 2 10.868 -18.068 15.604 1.00 18.01 O HETATM 13 CB DSN A 2 12.264 -17.106 18.556 1.00 17.32 C HETATM 14 OG DSN A 2 13.330 -17.396 17.657 1.00 16.88 O HETATM 15 N DAS A 3 10.778 -19.468 17.378 1.00 17.00 N HETATM 16 CA DAS A 3 10.713 -20.679 16.553 1.00 16.67 C HETATM 17 C DAS A 3 11.914 -20.828 15.658 1.00 16.29 C HETATM 18 O DAS A 3 11.779 -21.142 14.483 1.00 16.52 O HETATM 19 CB DAS A 3 10.443 -21.962 17.356 1.00 16.63 C HETATM 20 CG DAS A 3 11.417 -22.241 18.478 1.00 17.39 C HETATM 21 OD1 DAS A 3 11.369 -23.358 19.044 1.00 20.16 O HETATM 22 OD2 DAS A 3 12.233 -21.367 18.830 1.00 17.77 O HETATM 23 N DGL A 4 13.097 -20.587 16.202 1.00 16.01 N HETATM 24 CA DGL A 4 14.337 -20.669 15.435 1.00 16.10 C HETATM 25 C DGL A 4 14.450 -19.659 14.328 1.00 15.64 C HETATM 26 O DGL A 4 15.001 -19.957 13.270 1.00 15.51 O HETATM 27 CB DGL A 4 15.529 -20.456 16.361 1.00 16.22 C HETATM 28 CG DGL A 4 15.373 -21.294 17.615 1.00 18.22 C HETATM 29 CD DGL A 4 16.692 -21.398 18.327 1.00 20.75 C HETATM 30 OE1 DGL A 4 17.395 -20.371 18.499 1.00 21.48 O HETATM 31 OE2 DGL A 4 17.011 -22.540 18.716 1.00 22.73 O HETATM 32 N DAS A 5 13.961 -18.447 14.572 1.00 15.48 N HETATM 33 CA DAS A 5 14.015 -17.389 13.575 1.00 15.54 C HETATM 34 C DAS A 5 13.032 -17.670 12.480 1.00 15.31 C HETATM 35 O DAS A 5 13.357 -17.533 11.303 1.00 15.47 O HETATM 36 CB DAS A 5 13.776 -16.012 14.195 1.00 15.64 C HETATM 37 CG DAS A 5 14.904 -15.546 15.100 1.00 16.32 C HETATM 38 OD1 DAS A 5 16.028 -16.103 15.107 1.00 16.56 O HETATM 39 OD2 DAS A 5 14.661 -14.579 15.846 1.00 17.98 O HETATM 40 N DPN A 6 11.821 -18.071 12.852 1.00 15.20 N HETATM 41 CA DPN A 6 10.814 -18.464 11.872 1.00 15.18 C HETATM 42 C DPN A 6 11.365 -19.525 10.953 1.00 15.90 C HETATM 43 O DPN A 6 11.268 -19.396 9.733 1.00 16.44 O HETATM 44 CB DPN A 6 9.551 -18.963 12.563 1.00 14.76 C HETATM 45 CG DPN A 6 8.406 -19.065 11.566 1.00 13.47 C HETATM 46 CD1 DPN A 6 8.220 -20.229 10.809 1.00 11.73 C HETATM 47 CD2 DPN A 6 7.517 -17.999 11.409 1.00 12.14 C HETATM 48 CE1 DPN A 6 7.172 -20.328 9.890 1.00 9.67 C HETATM 49 CE2 DPN A 6 6.466 -18.099 10.495 1.00 10.69 C HETATM 50 CZ DPN A 6 6.298 -19.261 9.738 1.00 9.99 C HETATM 51 N DLY A 7 11.951 -20.581 11.518 1.00 16.25 N HETATM 52 CA DLY A 7 12.485 -21.691 10.717 1.00 16.76 C HETATM 53 C DLY A 7 13.561 -21.270 9.752 1.00 16.52 C HETATM 54 O DLY A 7 13.594 -21.722 8.613 1.00 16.51 O HETATM 55 CB DLY A 7 13.058 -22.768 11.634 1.00 16.95 C HETATM 56 CG DLY A 7 12.621 -24.167 11.211 1.00 19.49 C HETATM 57 CD DLY A 7 13.462 -24.749 10.084 1.00 23.28 C HETATM 58 CE DLY A 7 13.709 -26.232 10.315 1.00 25.93 C HETATM 59 NZ DLY A 7 15.035 -26.380 10.901 1.00 28.87 N HETATM 60 N DAL A 8 14.451 -20.399 10.217 1.00 16.22 N HETATM 61 CA DAL A 8 15.587 -19.926 9.443 1.00 16.09 C HETATM 62 CB DAL A 8 16.423 -19.012 10.340 1.00 16.05 C HETATM 63 C DAL A 8 15.125 -19.184 8.220 1.00 15.99 C HETATM 64 O DAL A 8 15.731 -19.303 7.154 1.00 16.08 O HETATM 65 N DVA A 9 14.038 -18.429 8.358 1.00 15.63 N HETATM 66 CA DVA A 9 13.511 -17.626 7.259 1.00 15.30 C HETATM 67 CB DVA A 9 12.737 -16.457 7.860 1.00 15.16 C HETATM 68 CG1 DVA A 9 11.866 -15.747 6.834 1.00 14.72 C HETATM 69 CG2 DVA A 9 13.696 -15.454 8.477 1.00 14.77 C HETATM 70 C DVA A 9 12.648 -18.441 6.313 1.00 15.51 C HETATM 71 O DVA A 9 12.865 -18.420 5.095 1.00 16.19 O HETATM 72 N DPN A 10 11.676 -19.171 6.857 1.00 14.87 N HETATM 73 CA DPN A 10 10.689 -19.883 6.045 1.00 14.39 C HETATM 74 C DPN A 10 11.127 -21.268 5.656 1.00 14.13 C HETATM 75 O DPN A 10 10.596 -21.844 4.710 1.00 14.26 O HETATM 76 CB DPN A 10 9.361 -19.931 6.812 1.00 14.20 C HETATM 77 CG DPN A 10 8.729 -18.549 6.824 1.00 13.94 C HETATM 78 CD1 DPN A 10 7.954 -18.115 5.752 1.00 13.21 C HETATM 79 CD2 DPN A 10 8.929 -17.693 7.905 1.00 13.81 C HETATM 80 CE1 DPN A 10 7.385 -16.838 5.773 1.00 14.22 C HETATM 81 CE2 DPN A 10 8.360 -16.417 7.922 1.00 13.95 C HETATM 82 CZ DPN A 10 7.579 -15.983 6.854 1.00 13.50 C