HEADER CELL ADHESION 13-SEP-11 3TSZ TITLE CRYSTAL STRUCTURE OF PDZ3-SH3-GUK CORE MODULE FROM HUMAN ZO-1 IN TITLE 2 COMPLEX WITH 12MER PEPTIDE FROM HUMAN JAM-A CYTOPLASMIC TAIL COMPND MOL_ID: 1; COMPND 2 MOLECULE: TIGHT JUNCTION PROTEIN ZO-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PDZ3-SH3-GUK (UNP RESIDUES 417-803); COMPND 5 SYNONYM: TIGHT JUNCTION PROTEIN 1, ZONA OCCLUDENS PROTEIN 1, ZONULA COMPND 6 OCCLUDENS PROTEIN 1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: JUNCTIONAL ADHESION MOLECULE A; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: JAM-A_P12 (UNP RESIDUES 288-299); COMPND 12 SYNONYM: JAM-A, JUNCTIONAL ADHESION MOLECULE 1, JAM-1, PLATELET F11 COMPND 13 RECEPTOR, PLATELET ADHESION MOLECULE 1, PAM-1; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TJP1, ZO1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(C41); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET14B; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 OTHER_DETAILS: SYNTHETIC PEPTIDE KEYWDS PDZ3-SH3-GUK, SCAFFOLDING, JAM, TIGHT JUNCTION, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR J.NOMME,A.LAVIE REVDAT 4 13-SEP-23 3TSZ 1 SEQADV REVDAT 3 28-DEC-11 3TSZ 1 JRNL REVDAT 2 16-NOV-11 3TSZ 1 JRNL REVDAT 1 12-OCT-11 3TSZ 0 JRNL AUTH J.NOMME,A.S.FANNING,M.CAFFREY,M.F.LYE,J.M.ANDERSON,A.LAVIE JRNL TITL THE SRC HOMOLOGY 3 DOMAIN IS REQUIRED FOR JUNCTIONAL JRNL TITL 2 ADHESION MOLECULE BINDING TO THE THIRD PDZ DOMAIN OF THE JRNL TITL 3 SCAFFOLDING PROTEIN ZO-1. JRNL REF J.BIOL.CHEM. V. 286 43352 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 22030391 JRNL DOI 10.1074/JBC.M111.304089 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 90.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 13557 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.247 REMARK 3 R VALUE (WORKING SET) : 0.240 REMARK 3 FREE R VALUE : 0.309 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1520 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 764 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 74.76 REMARK 3 BIN R VALUE (WORKING SET) : 0.3650 REMARK 3 BIN FREE R VALUE SET COUNT : 83 REMARK 3 BIN FREE R VALUE : 0.4140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2809 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 40 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.38000 REMARK 3 B22 (A**2) : -0.22000 REMARK 3 B33 (A**2) : -0.45000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.76000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.724 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.372 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.325 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 32.833 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.925 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.877 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2860 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3859 ; 1.058 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 347 ; 5.265 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 142 ;38.217 ;24.014 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 517 ;17.590 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;20.848 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 426 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2167 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1743 ; 0.330 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2809 ; 0.620 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1117 ; 0.784 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1050 ; 1.393 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 421 A 529 REMARK 3 ORIGIN FOR THE GROUP (A): -45.7739 -10.2445 -41.8357 REMARK 3 T TENSOR REMARK 3 T11: 0.3174 T22: 0.0761 REMARK 3 T33: 0.2586 T12: 0.0241 REMARK 3 T13: -0.0771 T23: 0.0311 REMARK 3 L TENSOR REMARK 3 L11: 3.4475 L22: 4.0456 REMARK 3 L33: 5.6861 L12: 1.7545 REMARK 3 L13: 2.1325 L23: 2.0103 REMARK 3 S TENSOR REMARK 3 S11: -0.0528 S12: 0.0577 S13: -0.0039 REMARK 3 S21: -0.6013 S22: 0.0452 S23: 0.7021 REMARK 3 S31: -0.2694 S32: -0.5077 S33: 0.0077 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 530 A 653 REMARK 3 ORIGIN FOR THE GROUP (A): -32.8063 -5.7743 -21.4875 REMARK 3 T TENSOR REMARK 3 T11: 0.2689 T22: 0.1166 REMARK 3 T33: 0.1291 T12: -0.0380 REMARK 3 T13: 0.0609 T23: -0.0339 REMARK 3 L TENSOR REMARK 3 L11: 5.0644 L22: 1.1764 REMARK 3 L33: 3.8986 L12: -1.9724 REMARK 3 L13: 3.7069 L23: -1.6769 REMARK 3 S TENSOR REMARK 3 S11: -0.0870 S12: -0.2980 S13: 0.0870 REMARK 3 S21: -0.0047 S22: 0.0145 S23: 0.1299 REMARK 3 S31: -0.2157 S32: -0.0479 S33: 0.0725 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 654 A 802 REMARK 3 ORIGIN FOR THE GROUP (A): -13.6261 -12.4343 -6.1623 REMARK 3 T TENSOR REMARK 3 T11: 0.1584 T22: 0.3538 REMARK 3 T33: 0.2202 T12: 0.0380 REMARK 3 T13: 0.0895 T23: 0.0514 REMARK 3 L TENSOR REMARK 3 L11: 2.6969 L22: 2.7410 REMARK 3 L33: 3.9103 L12: -0.1083 REMARK 3 L13: 1.6844 L23: -0.1282 REMARK 3 S TENSOR REMARK 3 S11: -0.0826 S12: -0.3142 S13: -0.0573 REMARK 3 S21: 0.1505 S22: 0.0305 S23: -0.3816 REMARK 3 S31: 0.0155 S32: 0.4155 S33: 0.0521 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 418 B 427 REMARK 3 ORIGIN FOR THE GROUP (A): -50.1051 -1.8902 -34.4802 REMARK 3 T TENSOR REMARK 3 T11: 0.6631 T22: 0.2166 REMARK 3 T33: 1.0495 T12: 0.0596 REMARK 3 T13: 0.0654 T23: -0.1114 REMARK 3 L TENSOR REMARK 3 L11: 22.8665 L22: 0.3180 REMARK 3 L33: 3.8660 L12: 0.0021 REMARK 3 L13: 9.2549 L23: 0.1891 REMARK 3 S TENSOR REMARK 3 S11: -0.7696 S12: -1.9159 S13: 0.3679 REMARK 3 S21: 0.0115 S22: 0.1146 S23: 0.5744 REMARK 3 S31: -0.3013 S32: -0.8123 S33: 0.6551 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3TSZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1000067880. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15077 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 90.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.57 REMARK 200 COMPLETENESS FOR SHELL (%) : 74.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.55300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.630 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3LH5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 9% PEG 3350, 0.1 M SODIUM MALONATE PH REMARK 280 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.15K, PH 7.4 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 24.85000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 413 REMARK 465 SER A 414 REMARK 465 HIS A 415 REMARK 465 MET A 416 REMARK 465 ILE A 417 REMARK 465 LEU A 418 REMARK 465 ARG A 419 REMARK 465 PRO A 420 REMARK 465 THR A 589 REMARK 465 LEU A 590 REMARK 465 PRO A 591 REMARK 465 LYS A 592 REMARK 465 THR A 593 REMARK 465 ALA A 594 REMARK 465 GLY A 595 REMARK 465 GLY A 596 REMARK 465 ASP A 597 REMARK 465 ARG A 598 REMARK 465 ALA A 599 REMARK 465 ASP A 600 REMARK 465 PHE A 601 REMARK 465 TRP A 602 REMARK 465 ARG A 603 REMARK 465 PHE A 604 REMARK 465 ARG A 605 REMARK 465 GLY A 606 REMARK 465 LEU A 607 REMARK 465 ARG A 608 REMARK 465 SER A 609 REMARK 465 SER A 610 REMARK 465 LYS A 611 REMARK 465 ARG A 612 REMARK 465 ASN A 613 REMARK 465 LEU A 614 REMARK 465 ARG A 615 REMARK 465 LYS A 616 REMARK 465 SER A 617 REMARK 465 ARG A 618 REMARK 465 GLU A 619 REMARK 465 ASP A 620 REMARK 465 LEU A 621 REMARK 465 SER A 622 REMARK 465 ALA A 623 REMARK 465 GLN A 624 REMARK 465 PRO A 625 REMARK 465 VAL A 626 REMARK 465 GLN A 627 REMARK 465 SER A 685 REMARK 465 SER A 686 REMARK 465 GLY A 803 REMARK 465 GLU B 416 REMARK 465 GLY B 417 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 588 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 629 CG CD CE NZ REMARK 470 ARG A 684 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 748 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 420 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 431 -59.95 74.15 REMARK 500 ASP A 453 -29.92 73.04 REMARK 500 ASN A 471 -106.83 52.94 REMARK 500 ASN A 477 59.77 -140.97 REMARK 500 VAL A 515 128.92 -23.19 REMARK 500 SER A 518 113.42 -161.96 REMARK 500 ASN A 551 18.33 58.72 REMARK 500 VAL A 586 44.31 -77.69 REMARK 500 GLN A 587 46.45 -149.08 REMARK 500 THR A 681 -96.48 -117.38 REMARK 500 ASP A 682 -1.54 -141.28 REMARK 500 ASP A 699 -9.19 -57.98 REMARK 500 ASP A 701 55.74 38.68 REMARK 500 ALA A 719 22.06 -73.33 REMARK 500 TYR A 722 79.90 12.80 REMARK 500 THR B 422 128.72 62.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3TSV RELATED DB: PDB REMARK 900 RELATED ID: 3TSW RELATED DB: PDB DBREF 3TSZ A 417 803 UNP Q07157 ZO1_HUMAN 417 803 DBREF 3TSZ B 416 427 UNP Q9Y624 JAM1_HUMAN 288 299 SEQADV 3TSZ GLY A 413 UNP Q07157 EXPRESSION TAG SEQADV 3TSZ SER A 414 UNP Q07157 EXPRESSION TAG SEQADV 3TSZ HIS A 415 UNP Q07157 EXPRESSION TAG SEQADV 3TSZ MET A 416 UNP Q07157 EXPRESSION TAG SEQRES 1 A 391 GLY SER HIS MET ILE LEU ARG PRO SER MET LYS LEU VAL SEQRES 2 A 391 LYS PHE ARG LYS GLY ASP SER VAL GLY LEU ARG LEU ALA SEQRES 3 A 391 GLY GLY ASN ASP VAL GLY ILE PHE VAL ALA GLY VAL LEU SEQRES 4 A 391 GLU ASP SER PRO ALA ALA LYS GLU GLY LEU GLU GLU GLY SEQRES 5 A 391 ASP GLN ILE LEU ARG VAL ASN ASN VAL ASP PHE THR ASN SEQRES 6 A 391 ILE ILE ARG GLU GLU ALA VAL LEU PHE LEU LEU ASP LEU SEQRES 7 A 391 PRO LYS GLY GLU GLU VAL THR ILE LEU ALA GLN LYS LYS SEQRES 8 A 391 LYS ASP VAL TYR ARG ARG ILE VAL GLU SER ASP VAL GLY SEQRES 9 A 391 ASP SER PHE TYR ILE ARG THR HIS PHE GLU TYR GLU LYS SEQRES 10 A 391 GLU SER PRO TYR GLY LEU SER PHE ASN LYS GLY GLU VAL SEQRES 11 A 391 PHE ARG VAL VAL ASP THR LEU TYR ASN GLY LYS LEU GLY SEQRES 12 A 391 SER TRP LEU ALA ILE ARG ILE GLY LYS ASN HIS LYS GLU SEQRES 13 A 391 VAL GLU ARG GLY ILE ILE PRO ASN LYS ASN ARG ALA GLU SEQRES 14 A 391 GLN LEU ALA SER VAL GLN TYR THR LEU PRO LYS THR ALA SEQRES 15 A 391 GLY GLY ASP ARG ALA ASP PHE TRP ARG PHE ARG GLY LEU SEQRES 16 A 391 ARG SER SER LYS ARG ASN LEU ARG LYS SER ARG GLU ASP SEQRES 17 A 391 LEU SER ALA GLN PRO VAL GLN THR LYS PHE PRO ALA TYR SEQRES 18 A 391 GLU ARG VAL VAL LEU ARG GLU ALA GLY PHE LEU ARG PRO SEQRES 19 A 391 VAL THR ILE PHE GLY PRO ILE ALA ASP VAL ALA ARG GLU SEQRES 20 A 391 LYS LEU ALA ARG GLU GLU PRO ASP ILE TYR GLN ILE ALA SEQRES 21 A 391 LYS SER GLU PRO ARG ASP ALA GLY THR ASP GLN ARG SER SEQRES 22 A 391 SER GLY ILE ILE ARG LEU HIS THR ILE LYS GLN ILE ILE SEQRES 23 A 391 ASP GLN ASP LYS HIS ALA LEU LEU ASP VAL THR PRO ASN SEQRES 24 A 391 ALA VAL ASP ARG LEU ASN TYR ALA GLN TRP TYR PRO ILE SEQRES 25 A 391 VAL VAL PHE LEU ASN PRO ASP SER LYS GLN GLY VAL LYS SEQRES 26 A 391 THR MET ARG MET ARG LEU CYS PRO GLU SER ARG LYS SER SEQRES 27 A 391 ALA ARG LYS LEU TYR GLU ARG SER HIS LYS LEU ARG LYS SEQRES 28 A 391 ASN ASN HIS HIS LEU PHE THR THR THR ILE ASN LEU ASN SEQRES 29 A 391 SER MET ASN ASP GLY TRP TYR GLY ALA LEU LYS GLU ALA SEQRES 30 A 391 ILE GLN GLN GLN GLN ASN GLN LEU VAL TRP VAL SER GLU SEQRES 31 A 391 GLY SEQRES 1 B 12 GLU GLY GLU PHE LYS GLN THR SER SER PHE LEU VAL FORMUL 3 HOH *40(H2 O) HELIX 1 1 SER A 454 GLU A 459 1 6 HELIX 2 2 ILE A 479 LEU A 490 1 12 HELIX 3 3 LYS A 503 ARG A 508 1 6 HELIX 4 4 ARG A 509 VAL A 511 5 3 HELIX 5 5 LEU A 549 LYS A 553 5 5 HELIX 6 6 LYS A 564 HIS A 566 5 3 HELIX 7 7 ASN A 576 SER A 585 1 10 HELIX 8 8 ILE A 653 GLU A 665 1 13 HELIX 9 9 ARG A 690 ASP A 699 1 10 HELIX 10 10 THR A 709 ALA A 719 1 11 HELIX 11 11 SER A 732 CYS A 744 1 13 HELIX 12 12 SER A 750 HIS A 766 1 17 HELIX 13 13 HIS A 767 PHE A 769 5 3 HELIX 14 14 ASP A 780 GLN A 796 1 17 SHEET 1 A 5 MET A 422 ARG A 428 0 SHEET 2 A 5 GLU A 495 LYS A 502 -1 O VAL A 496 N PHE A 427 SHEET 3 A 5 ASP A 465 VAL A 470 -1 N GLN A 466 O GLN A 501 SHEET 4 A 5 GLY A 444 VAL A 450 -1 N VAL A 447 O ASP A 465 SHEET 5 A 5 LEU A 435 GLY A 440 -1 N ALA A 438 O PHE A 446 SHEET 1 B 4 MET A 422 ARG A 428 0 SHEET 2 B 4 GLU A 495 LYS A 502 -1 O VAL A 496 N PHE A 427 SHEET 3 B 4 ASP A 465 VAL A 470 -1 N GLN A 466 O GLN A 501 SHEET 4 B 4 VAL A 473 ASP A 474 -1 O VAL A 473 N VAL A 470 SHEET 1 C 6 GLU A 568 PRO A 575 0 SHEET 2 C 6 SER A 556 ILE A 562 -1 N TRP A 557 O ILE A 574 SHEET 3 C 6 VAL A 542 ASP A 547 -1 N ASP A 547 O LEU A 558 SHEET 4 C 6 PHE A 519 THR A 523 -1 N PHE A 519 O VAL A 545 SHEET 5 C 6 TYR A 633 GLU A 640 -1 O GLU A 634 N ARG A 522 SHEET 6 C 6 LEU A 797 SER A 801 -1 O VAL A 798 N ARG A 639 SHEET 1 D 5 TYR A 669 ILE A 671 0 SHEET 2 D 5 HIS A 703 LEU A 706 1 O LEU A 705 N GLN A 670 SHEET 3 D 5 VAL A 647 PHE A 650 1 N VAL A 647 O ALA A 704 SHEET 4 D 5 ILE A 724 ASN A 729 1 O VAL A 726 N PHE A 650 SHEET 5 D 5 THR A 771 ASN A 774 1 O ILE A 773 N PHE A 727 CRYST1 50.500 49.700 91.800 90.00 101.10 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019802 0.000000 0.003885 0.00000 SCALE2 0.000000 0.020121 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011101 0.00000