data_3TVB
# 
_entry.id   3TVB 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.387 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   3TVB         pdb_00003tvb 10.2210/pdb3tvb/pdb 
NDB   NA1314       ?            ?                   
RCSB  RCSB067964   ?            ?                   
WWPDB D_1000067964 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2012-03-14 
2 'Structure model' 1 1 2012-07-11 
3 'Structure model' 1 2 2020-01-29 
4 'Structure model' 1 3 2024-02-28 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Database references'  
2 3 'Structure model' Advisory               
3 3 'Structure model' 'Data collection'      
4 3 'Structure model' 'Derived calculations' 
5 4 'Structure model' 'Data collection'      
6 4 'Structure model' 'Database references'  
7 4 'Structure model' 'Derived calculations' 
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1  3 'Structure model' ndb_struct_na_base_pair      
2  3 'Structure model' ndb_struct_na_base_pair_step 
3  3 'Structure model' pdbx_distant_solvent_atoms   
4  3 'Structure model' pdbx_struct_assembly         
5  3 'Structure model' pdbx_struct_assembly_gen     
6  3 'Structure model' pdbx_struct_assembly_prop    
7  3 'Structure model' struct_biol                  
8  3 'Structure model' struct_conn                  
9  3 'Structure model' struct_conn_type             
10 4 'Structure model' chem_comp_atom               
11 4 'Structure model' chem_comp_bond               
12 4 'Structure model' database_2                   
13 4 'Structure model' pdbx_struct_conn_angle       
14 4 'Structure model' struct_conn                  
15 4 'Structure model' struct_site                  
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  4 'Structure model' '_database_2.pdbx_DOI'                        
2  4 'Structure model' '_database_2.pdbx_database_accession'         
3  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id'  
4  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'   
5  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 
6  4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'  
7  4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id'  
8  4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id'  
9  4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id'   
10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 
11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 
12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 
13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id'  
14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'   
15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 
16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'  
17 4 'Structure model' '_pdbx_struct_conn_angle.value'               
18 4 'Structure model' '_struct_conn.pdbx_dist_value'                
19 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id'             
20 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id'             
21 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id'              
22 4 'Structure model' '_struct_conn.ptnr1_label_asym_id'            
23 4 'Structure model' '_struct_conn.ptnr1_label_atom_id'            
24 4 'Structure model' '_struct_conn.ptnr1_label_comp_id'            
25 4 'Structure model' '_struct_conn.ptnr1_label_seq_id'             
26 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id'             
27 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'              
28 4 'Structure model' '_struct_conn.ptnr2_label_asym_id'            
29 4 'Structure model' '_struct_site.pdbx_auth_asym_id'              
30 4 'Structure model' '_struct_site.pdbx_auth_comp_id'              
31 4 'Structure model' '_struct_site.pdbx_auth_seq_id'               
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        3TVB 
_pdbx_database_status.recvd_initial_deposition_date   2011-09-19 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.SG_entry                        ? 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_nmr_data            ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Clark, G.R.'  1 
'Pytel, P.D.'  2 
'Squire, C.J.' 3 
# 
_citation.id                        primary 
_citation.title                     
'The high-resolution crystal structure of a parallel intermolecular DNA G-4 quadruplex/drug complex employing syn glycosyl linkages.' 
_citation.journal_abbrev            'Nucleic Acids Res.' 
_citation.journal_volume            40 
_citation.page_first                5731 
_citation.page_last                 5738 
_citation.year                      2012 
_citation.journal_id_ASTM           NARHAD 
_citation.country                   UK 
_citation.journal_id_ISSN           0305-1048 
_citation.journal_id_CSD            0389 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   22373921 
_citation.pdbx_database_id_DOI      10.1093/nar/gks193 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Clark, G.R.'  1 ? 
primary 'Pytel, P.D.'  2 ? 
primary 'Squire, C.J.' 3 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn 
;DNA (5'-D(*GP*GP*GP*G)-3')
;
1271.866 2   ? ? ? ? 
2 non-polymer syn DAUNOMYCIN                   527.520  4   ? ? ? ? 
3 non-polymer syn 'SODIUM ION'                 22.990   8   ? ? ? ? 
4 non-polymer syn 'MAGNESIUM ION'              24.305   2   ? ? ? ? 
5 water       nat water                        18.015   110 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       '(DG)(DG)(DG)(DG)' 
_entity_poly.pdbx_seq_one_letter_code_can   GGGG 
_entity_poly.pdbx_strand_id                 A,B 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
2 DAUNOMYCIN      DM1 
3 'SODIUM ION'    NA  
4 'MAGNESIUM ION' MG  
5 water           HOH 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1 DG n 
1 2 DG n 
1 3 DG n 
1 4 DG n 
# 
_pdbx_entity_src_syn.entity_id              1 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       ? 
_pdbx_entity_src_syn.pdbx_end_seq_num       ? 
_pdbx_entity_src_syn.organism_scientific    ? 
_pdbx_entity_src_syn.organism_common_name   ? 
_pdbx_entity_src_syn.ncbi_taxonomy_id       ? 
_pdbx_entity_src_syn.details                'Synthetic oligomer' 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ?            'C10 H14 N5 O7 P' 347.221 
DM1 non-polymer   . DAUNOMYCIN                           DAUNORUBICIN 'C27 H29 N O10'   527.520 
HOH non-polymer   . WATER                                ?            'H2 O'            18.015  
MG  non-polymer   . 'MAGNESIUM ION'                      ?            'Mg 2'            24.305  
NA  non-polymer   . 'SODIUM ION'                         ?            'Na 1'            22.990  
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1 DG 1 1 1 DG DG A . n 
A 1 2 DG 2 2 2 DG DG A . n 
A 1 3 DG 3 3 3 DG DG A . n 
A 1 4 DG 4 4 4 DG DG A . n 
B 1 1 DG 1 5 5 DG DG B . n 
B 1 2 DG 2 6 6 DG DG B . n 
B 1 3 DG 3 7 7 DG DG B . n 
B 1 4 DG 4 8 8 DG DG B . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
C 2 DM1 1  9   9   DM1 DM1 A . 
D 2 DM1 1  10  10  DM1 DM1 A . 
E 3 NA  1  13  13  NA  NA  A . 
F 3 NA  1  14  14  NA  NA  A . 
G 3 NA  1  15  15  NA  NA  A . 
H 2 DM1 1  11  11  DM1 DM1 B . 
I 2 DM1 1  12  12  DM1 DM1 B . 
J 3 NA  1  16  16  NA  NA  B . 
K 3 NA  1  17  17  NA  NA  B . 
L 3 NA  1  18  18  NA  NA  B . 
M 3 NA  1  19  19  NA  NA  B . 
N 3 NA  1  20  20  NA  NA  B . 
O 4 MG  1  21  21  MG  MG  B . 
P 4 MG  1  22  22  MG  MG  B . 
Q 5 HOH 1  101 101 HOH HOH A . 
Q 5 HOH 2  103 103 HOH HOH A . 
Q 5 HOH 3  107 107 HOH HOH A . 
Q 5 HOH 4  108 108 HOH HOH A . 
Q 5 HOH 5  115 115 HOH HOH A . 
Q 5 HOH 6  116 116 HOH HOH A . 
Q 5 HOH 7  120 120 HOH HOH A . 
Q 5 HOH 8  122 122 HOH HOH A . 
Q 5 HOH 9  123 123 HOH HOH A . 
Q 5 HOH 10 124 124 HOH HOH A . 
Q 5 HOH 11 127 127 HOH HOH A . 
Q 5 HOH 12 128 128 HOH HOH A . 
Q 5 HOH 13 129 129 HOH HOH A . 
Q 5 HOH 14 130 130 HOH HOH A . 
Q 5 HOH 15 133 133 HOH HOH A . 
Q 5 HOH 16 135 135 HOH HOH A . 
Q 5 HOH 17 137 137 HOH HOH A . 
Q 5 HOH 18 138 138 HOH HOH A . 
Q 5 HOH 19 139 139 HOH HOH A . 
Q 5 HOH 20 146 146 HOH HOH A . 
Q 5 HOH 21 148 148 HOH HOH A . 
Q 5 HOH 22 149 149 HOH HOH A . 
Q 5 HOH 23 151 151 HOH HOH A . 
Q 5 HOH 24 152 152 HOH HOH A . 
Q 5 HOH 25 153 153 HOH HOH A . 
Q 5 HOH 26 155 155 HOH HOH A . 
Q 5 HOH 27 156 156 HOH HOH A . 
Q 5 HOH 28 158 158 HOH HOH A . 
Q 5 HOH 29 164 164 HOH HOH A . 
Q 5 HOH 30 168 168 HOH HOH A . 
Q 5 HOH 31 169 169 HOH HOH A . 
Q 5 HOH 32 173 173 HOH HOH A . 
Q 5 HOH 33 175 175 HOH HOH A . 
Q 5 HOH 34 179 179 HOH HOH A . 
Q 5 HOH 35 183 183 HOH HOH A . 
Q 5 HOH 36 184 184 HOH HOH A . 
Q 5 HOH 37 186 186 HOH HOH A . 
Q 5 HOH 38 187 187 HOH HOH A . 
Q 5 HOH 39 190 190 HOH HOH A . 
Q 5 HOH 40 192 192 HOH HOH A . 
Q 5 HOH 41 195 195 HOH HOH A . 
Q 5 HOH 42 200 200 HOH HOH A . 
Q 5 HOH 43 201 201 HOH HOH A . 
Q 5 HOH 44 202 202 HOH HOH A . 
Q 5 HOH 45 207 207 HOH HOH A . 
Q 5 HOH 46 208 208 HOH HOH A . 
Q 5 HOH 47 209 209 HOH HOH A . 
Q 5 HOH 48 210 210 HOH HOH A . 
Q 5 HOH 49 211 211 HOH HOH A . 
Q 5 HOH 50 212 212 HOH HOH A . 
R 5 HOH 1  102 102 HOH HOH B . 
R 5 HOH 2  106 106 HOH HOH B . 
R 5 HOH 3  109 109 HOH HOH B . 
R 5 HOH 4  110 110 HOH HOH B . 
R 5 HOH 5  111 111 HOH HOH B . 
R 5 HOH 6  112 112 HOH HOH B . 
R 5 HOH 7  113 113 HOH HOH B . 
R 5 HOH 8  114 114 HOH HOH B . 
R 5 HOH 9  117 117 HOH HOH B . 
R 5 HOH 10 118 118 HOH HOH B . 
R 5 HOH 11 119 119 HOH HOH B . 
R 5 HOH 12 121 121 HOH HOH B . 
R 5 HOH 13 125 125 HOH HOH B . 
R 5 HOH 14 126 126 HOH HOH B . 
R 5 HOH 15 131 131 HOH HOH B . 
R 5 HOH 16 132 132 HOH HOH B . 
R 5 HOH 17 134 134 HOH HOH B . 
R 5 HOH 18 136 136 HOH HOH B . 
R 5 HOH 19 140 140 HOH HOH B . 
R 5 HOH 20 141 141 HOH HOH B . 
R 5 HOH 21 142 142 HOH HOH B . 
R 5 HOH 22 143 143 HOH HOH B . 
R 5 HOH 23 144 144 HOH HOH B . 
R 5 HOH 24 145 145 HOH HOH B . 
R 5 HOH 25 147 147 HOH HOH B . 
R 5 HOH 26 150 150 HOH HOH B . 
R 5 HOH 27 154 154 HOH HOH B . 
R 5 HOH 28 157 157 HOH HOH B . 
R 5 HOH 29 159 159 HOH HOH B . 
R 5 HOH 30 160 160 HOH HOH B . 
R 5 HOH 31 161 161 HOH HOH B . 
R 5 HOH 32 162 162 HOH HOH B . 
R 5 HOH 33 163 163 HOH HOH B . 
R 5 HOH 34 165 165 HOH HOH B . 
R 5 HOH 35 166 166 HOH HOH B . 
R 5 HOH 36 167 167 HOH HOH B . 
R 5 HOH 37 170 170 HOH HOH B . 
R 5 HOH 38 171 171 HOH HOH B . 
R 5 HOH 39 172 172 HOH HOH B . 
R 5 HOH 40 174 174 HOH HOH B . 
R 5 HOH 41 176 176 HOH HOH B . 
R 5 HOH 42 177 177 HOH HOH B . 
R 5 HOH 43 178 178 HOH HOH B . 
R 5 HOH 44 180 180 HOH HOH B . 
R 5 HOH 45 181 181 HOH HOH B . 
R 5 HOH 46 182 182 HOH HOH B . 
R 5 HOH 47 185 185 HOH HOH B . 
R 5 HOH 48 188 188 HOH HOH B . 
R 5 HOH 49 189 189 HOH HOH B . 
R 5 HOH 50 191 191 HOH HOH B . 
R 5 HOH 51 193 193 HOH HOH B . 
R 5 HOH 52 194 194 HOH HOH B . 
R 5 HOH 53 196 196 HOH HOH B . 
R 5 HOH 54 197 197 HOH HOH B . 
R 5 HOH 55 198 198 HOH HOH B . 
R 5 HOH 56 199 199 HOH HOH B . 
R 5 HOH 57 203 203 HOH HOH B . 
R 5 HOH 58 204 204 HOH HOH B . 
R 5 HOH 59 205 205 HOH HOH B . 
R 5 HOH 60 206 206 HOH HOH B . 
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
SHELX     'model building' . ? 1 
SHELXL-97 refinement       . ? 2 
DENZO     'data reduction' . ? 3 
SCALEPACK 'data scaling'   . ? 4 
SHELX     phasing          . ? 5 
# 
_cell.entry_id           3TVB 
_cell.length_a           40.209 
_cell.length_b           40.209 
_cell.length_c           49.831 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              16 
_cell.pdbx_unique_axis   ? 
_cell.length_a_esd       ? 
_cell.length_b_esd       ? 
_cell.length_c_esd       ? 
_cell.angle_alpha_esd    ? 
_cell.angle_beta_esd     ? 
_cell.angle_gamma_esd    ? 
# 
_symmetry.entry_id                         3TVB 
_symmetry.space_group_name_H-M             'I 4' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                79 
_symmetry.space_group_name_Hall            ? 
# 
_exptl.entry_id          3TVB 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      3.96 
_exptl_crystal.density_percent_sol   68.93 
_exptl_crystal.description           ? 
_exptl_crystal.F_000                 ? 
_exptl_crystal.preparation           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'Sitting drop' 
_exptl_crystal_grow.temp            277 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              7.0 
_exptl_crystal_grow.pdbx_details    
;NATRIX NR46 droplets  
0.005 M Magnesium sulfate, 0.05 M Tris HCl buffer at pH 8.5, 35% w/v 1,6-hexane diol, Sitting drop, temperature 277K
;
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           100 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               CCD 
_diffrn_detector.type                   'ADSC QUANTUM 315' 
_diffrn_detector.pdbx_collection_date   2004-07-10 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   1.006 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      SYNCHROTRON 
_diffrn_source.type                        'SSRL BEAMLINE BL9-1' 
_diffrn_source.pdbx_synchrotron_site       SSRL 
_diffrn_source.pdbx_synchrotron_beamline   BL9-1 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        1.006 
# 
_reflns.entry_id                     3TVB 
_reflns.observed_criterion_sigma_I   ? 
_reflns.observed_criterion_sigma_F   2.0 
_reflns.d_resolution_low             10.0 
_reflns.d_resolution_high            1.08 
_reflns.number_obs                   21428 
_reflns.number_all                   21428 
_reflns.percent_possible_obs         99.7 
_reflns.pdbx_Rmerge_I_obs            0.072 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        81.79 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              66.9 
_reflns.R_free_details               ? 
_reflns.limit_h_max                  ? 
_reflns.limit_h_min                  ? 
_reflns.limit_k_max                  ? 
_reflns.limit_k_min                  ? 
_reflns.limit_l_max                  ? 
_reflns.limit_l_min                  ? 
_reflns.observed_criterion_F_max     ? 
_reflns.observed_criterion_F_min     ? 
_reflns.pdbx_chi_squared             ? 
_reflns.pdbx_scaling_rejects         ? 
_reflns.pdbx_ordinal                 1 
_reflns.pdbx_diffrn_id               1 
# 
_reflns_shell.d_res_high             1.08 
_reflns_shell.d_res_low              1.13 
_reflns_shell.percent_possible_all   99.2 
_reflns_shell.Rmerge_I_obs           0.273 
_reflns_shell.pdbx_Rsym_value        ? 
_reflns_shell.meanI_over_sigI_obs    15.14 
_reflns_shell.pdbx_redundancy        ? 
_reflns_shell.percent_possible_obs   ? 
_reflns_shell.number_unique_all      ? 
_reflns_shell.number_measured_all    ? 
_reflns_shell.number_measured_obs    ? 
_reflns_shell.number_unique_obs      ? 
_reflns_shell.pdbx_chi_squared       ? 
_reflns_shell.pdbx_ordinal           1 
_reflns_shell.pdbx_diffrn_id         1 
# 
_refine.entry_id                                 3TVB 
_refine.ls_number_reflns_obs                     14501 
_refine.ls_number_reflns_all                     15269 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          4.0 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             10.00 
_refine.ls_d_res_high                            1.08 
_refine.ls_percent_reflns_obs                    89.8 
_refine.ls_R_factor_obs                          0.1618 
_refine.ls_R_factor_all                          0.1640 
_refine.ls_R_factor_R_work                       0.1591 
_refine.ls_R_factor_R_free                       0.2023 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 11.0 
_refine.ls_number_reflns_R_free                  1677 
_refine.ls_number_parameters                     2579 
_refine.ls_number_restraints                     2250 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.pdbx_ls_cross_valid_method               'FREE R' 
_refine.details                                  ? 
_refine.pdbx_starting_model                      NONE 
_refine.pdbx_method_to_determine_struct          'AB INITIO' 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       'ENGH AND HUBER' 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            RANDOM 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_ML                            ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.overall_SU_B                             ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.B_iso_min                                ? 
_refine.B_iso_max                                ? 
_refine.overall_SU_R_free                        ? 
_refine.ls_wR_factor_R_free                      ? 
_refine.ls_wR_factor_R_work                      ? 
_refine.overall_FOM_free_R_set                   ? 
_refine.overall_FOM_work_R_set                   ? 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_analyze.entry_id                        3TVB 
_refine_analyze.Luzzati_coordinate_error_obs    ? 
_refine_analyze.Luzzati_sigma_a_obs             ? 
_refine_analyze.Luzzati_d_res_low_obs           ? 
_refine_analyze.Luzzati_coordinate_error_free   ? 
_refine_analyze.Luzzati_sigma_a_free            ? 
_refine_analyze.Luzzati_d_res_low_free          ? 
_refine_analyze.number_disordered_residues      0 
_refine_analyze.occupancy_sum_hydrogen          0.00 
_refine_analyze.occupancy_sum_non_hydrogen      430.19 
_refine_analyze.pdbx_Luzzati_d_res_high_obs     ? 
_refine_analyze.pdbx_refine_id                  'X-RAY DIFFRACTION' 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   170 
_refine_hist.pdbx_number_atoms_ligand         162 
_refine_hist.number_atoms_solvent             110 
_refine_hist.number_atoms_total               442 
_refine_hist.d_res_high                       1.08 
_refine_hist.d_res_low                        10.00 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_restraint_function 
_refine_ls_restr.pdbx_refine_id 
s_bond_d               0.014 ? ? ? ? 'X-RAY DIFFRACTION' 
s_angle_d              0.024 ? ? ? ? 'X-RAY DIFFRACTION' 
s_similar_dist         0.000 ? ? ? ? 'X-RAY DIFFRACTION' 
s_from_restr_planes    0.000 ? ? ? ? 'X-RAY DIFFRACTION' 
s_zero_chiral_vol      0.000 ? ? ? ? 'X-RAY DIFFRACTION' 
s_non_zero_chiral_vol  0.000 ? ? ? ? 'X-RAY DIFFRACTION' 
s_anti_bump_dis_restr  0.072 ? ? ? ? 'X-RAY DIFFRACTION' 
s_rigid_bond_adp_cmpnt 0.005 ? ? ? ? 'X-RAY DIFFRACTION' 
s_similar_adp_cmpnt    0.019 ? ? ? ? 'X-RAY DIFFRACTION' 
s_approx_iso_adps      0.000 ? ? ? ? 'X-RAY DIFFRACTION' 
# 
_pdbx_refine.pdbx_refine_id                              'X-RAY DIFFRACTION' 
_pdbx_refine.entry_id                                    3TVB 
_pdbx_refine.R_factor_all_no_cutoff                      0.1640 
_pdbx_refine.R_factor_obs_no_cutoff                      0.1618 
_pdbx_refine.free_R_factor_no_cutoff                     0.2023 
_pdbx_refine.free_R_error_no_cutoff                      ? 
_pdbx_refine.free_R_val_test_set_size_perc_no_cutoff     11.0 
_pdbx_refine.free_R_val_test_set_ct_no_cutoff            1677 
_pdbx_refine.R_factor_all_4sig_cutoff                    0.1614 
_pdbx_refine.R_factor_obs_4sig_cutoff                    0.1591 
_pdbx_refine.free_R_factor_4sig_cutoff                   0.1985 
_pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff   11.0 
_pdbx_refine.free_R_val_test_set_ct_4sig_cutoff          1598 
_pdbx_refine.number_reflns_obs_4sig_cutoff               14501 
# 
_database_PDB_matrix.entry_id          3TVB 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.000000 
_database_PDB_matrix.origx_vector[2]   0.000000 
_database_PDB_matrix.origx_vector[3]   0.000000 
# 
_struct.entry_id                  3TVB 
_struct.title                     'A Highly Symmetric DNA G-4 Quadruplex/drug Complex' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        3TVB 
_struct_keywords.pdbx_keywords   DNA/antibiotic 
_struct_keywords.text            'G-4 Quadruplex, Daunomycin, DNA-Drug Complex, DNA-antibiotic complex' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 2 ? 
D N N 2 ? 
E N N 3 ? 
F N N 3 ? 
G N N 3 ? 
H N N 2 ? 
I N N 2 ? 
J N N 3 ? 
K N N 3 ? 
L N N 3 ? 
M N N 3 ? 
N N N 3 ? 
O N N 4 ? 
P N N 4 ? 
Q N N 5 ? 
R N N 5 ? 
# 
_struct_ref.id                         1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    3TVB 
_struct_ref.pdbx_db_accession          3TVB 
_struct_ref.entity_id                  1 
_struct_ref.pdbx_align_begin           ? 
_struct_ref.pdbx_seq_one_letter_code   GGGG 
_struct_ref.pdbx_db_isoform            ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 3TVB A 1 ? 4 ? 3TVB 1 ? 4 ? 1 4 
2 1 3TVB B 1 ? 4 ? 3TVB 5 ? 8 ? 5 8 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_and_software_defined_assembly 
_pdbx_struct_assembly.method_details       PISA 
_pdbx_struct_assembly.oligomeric_details   octameric 
_pdbx_struct_assembly.oligomeric_count     8 
# 
loop_
_pdbx_struct_assembly_prop.biol_id 
_pdbx_struct_assembly_prop.type 
_pdbx_struct_assembly_prop.value 
_pdbx_struct_assembly_prop.details 
1 'ABSA (A^2)' 9450  ? 
1 MORE         -265  ? 
1 'SSA (A^2)'  11500 ? 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1,2,3,4 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
# 
loop_
_pdbx_struct_oper_list.id 
_pdbx_struct_oper_list.type 
_pdbx_struct_oper_list.name 
_pdbx_struct_oper_list.symmetry_operation 
_pdbx_struct_oper_list.matrix[1][1] 
_pdbx_struct_oper_list.matrix[1][2] 
_pdbx_struct_oper_list.matrix[1][3] 
_pdbx_struct_oper_list.vector[1] 
_pdbx_struct_oper_list.matrix[2][1] 
_pdbx_struct_oper_list.matrix[2][2] 
_pdbx_struct_oper_list.matrix[2][3] 
_pdbx_struct_oper_list.vector[2] 
_pdbx_struct_oper_list.matrix[3][1] 
_pdbx_struct_oper_list.matrix[3][2] 
_pdbx_struct_oper_list.matrix[3][3] 
_pdbx_struct_oper_list.vector[3] 
1 'identity operation'         1_555 x,y,z       1.0000000000  0.0000000000  0.0000000000 0.0000000000  0.0000000000  1.0000000000 
0.0000000000 0.0000000000  0.0000000000 0.0000000000 1.0000000000 0.0000000000 
2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1.0000000000 0.0000000000  0.0000000000 40.2090000000 0.0000000000  
-1.0000000000 0.0000000000 40.2090000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 
3 'crystal symmetry operation' 3_655 -y+1,x,z    0.0000000000  -1.0000000000 0.0000000000 40.2090000000 1.0000000000  0.0000000000 
0.0000000000 0.0000000000  0.0000000000 0.0000000000 1.0000000000 0.0000000000 
4 'crystal symmetry operation' 4_565 y,-x+1,z    0.0000000000  1.0000000000  0.0000000000 0.0000000000  -1.0000000000 0.0000000000 
0.0000000000 40.2090000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
metalc1  metalc ? ? A DG 1 O6 ? ? ? 1_555 E NA  . NA ? ? A DG 1  A NA  13  1_555 ? ? ? ? ? ? ?           2.771 ? ? 
metalc2  metalc ? ? A DG 2 O6 ? ? ? 1_555 E NA  . NA ? ? A DG 2  A NA  13  1_555 ? ? ? ? ? ? ?           2.858 ? ? 
metalc3  metalc ? ? A DG 2 O6 ? ? ? 1_555 F NA  . NA ? ? A DG 2  A NA  14  1_555 ? ? ? ? ? ? ?           2.804 ? ? 
metalc4  metalc ? ? A DG 3 O6 ? ? ? 1_555 F NA  . NA ? ? A DG 3  A NA  14  1_555 ? ? ? ? ? ? ?           2.633 ? ? 
metalc5  metalc ? ? A DG 3 O6 ? ? ? 1_555 G NA  . NA ? ? A DG 3  A NA  15  1_555 ? ? ? ? ? ? ?           3.200 ? ? 
metalc6  metalc ? ? A DG 4 O6 ? ? ? 1_555 G NA  . NA ? ? A DG 4  A NA  15  1_555 ? ? ? ? ? ? ?           2.379 ? ? 
metalc7  metalc ? ? B DG 1 O6 ? ? ? 1_555 J NA  . NA ? ? B DG 5  B NA  16  1_555 ? ? ? ? ? ? ?           2.784 ? ? 
metalc8  metalc ? ? B DG 2 O6 ? ? ? 1_555 J NA  . NA ? ? B DG 6  B NA  16  1_555 ? ? ? ? ? ? ?           2.884 ? ? 
metalc9  metalc ? ? B DG 2 O6 ? ? ? 1_555 K NA  . NA ? ? B DG 6  B NA  17  1_555 ? ? ? ? ? ? ?           2.781 ? ? 
metalc10 metalc ? ? B DG 3 O6 ? ? ? 1_555 K NA  . NA ? ? B DG 7  B NA  17  1_555 ? ? ? ? ? ? ?           2.648 ? ? 
metalc11 metalc ? ? B DG 3 O6 ? ? ? 1_555 L NA  . NA ? ? B DG 7  B NA  18  1_555 ? ? ? ? ? ? ?           3.120 ? ? 
metalc12 metalc ? ? B DG 4 O6 ? ? ? 1_555 L NA  . NA ? ? B DG 8  B NA  18  1_555 ? ? ? ? ? ? ?           2.458 ? ? 
metalc13 metalc ? ? M NA . NA ? ? ? 1_555 R HOH . O  ? ? B NA 19 B HOH 109 1_555 ? ? ? ? ? ? ?           2.441 ? ? 
metalc14 metalc ? ? M NA . NA ? ? ? 1_555 R HOH . O  ? ? B NA 19 B HOH 110 1_555 ? ? ? ? ? ? ?           2.437 ? ? 
metalc15 metalc ? ? O MG . MG ? ? ? 1_555 R HOH . O  ? ? B MG 21 B HOH 111 1_555 ? ? ? ? ? ? ?           1.979 ? ? 
metalc16 metalc ? ? P MG . MG ? ? ? 1_555 R HOH . O  ? ? B MG 22 B HOH 102 1_555 ? ? ? ? ? ? ?           2.148 ? ? 
metalc17 metalc ? ? P MG . MG ? ? ? 1_555 R HOH . O  ? ? B MG 22 B HOH 106 1_555 ? ? ? ? ? ? ?           2.384 ? ? 
hydrog1  hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DG  1 O6 ? ? A DG 1  A DG  1   3_655 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog2  hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DG  1 N7 ? ? A DG 1  A DG  1   3_655 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog3  hydrog ? ? A DG 1 N7 ? ? ? 1_555 A DG  1 N2 ? ? A DG 1  A DG  1   4_565 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog4  hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DG  1 N1 ? ? A DG 1  A DG  1   4_565 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog5  hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DG  2 O6 ? ? A DG 2  A DG  2   4_565 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog6  hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DG  2 N7 ? ? A DG 2  A DG  2   4_565 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog7  hydrog ? ? A DG 2 N7 ? ? ? 1_555 A DG  2 N2 ? ? A DG 2  A DG  2   3_655 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog8  hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DG  2 N1 ? ? A DG 2  A DG  2   3_655 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog9  hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DG  3 O6 ? ? A DG 3  A DG  3   4_565 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog10 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG  3 N7 ? ? A DG 3  A DG  3   4_565 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog11 hydrog ? ? A DG 3 N7 ? ? ? 1_555 A DG  3 N2 ? ? A DG 3  A DG  3   3_655 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog12 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DG  3 N1 ? ? A DG 3  A DG  3   3_655 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog13 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DG  4 O6 ? ? A DG 4  A DG  4   4_565 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog14 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DG  4 N7 ? ? A DG 4  A DG  4   4_565 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog15 hydrog ? ? A DG 4 N7 ? ? ? 1_555 A DG  4 N2 ? ? A DG 4  A DG  4   3_655 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog16 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DG  4 N1 ? ? A DG 4  A DG  4   3_655 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog17 hydrog ? ? B DG 1 N1 ? ? ? 1_555 B DG  1 O6 ? ? B DG 5  B DG  5   4_565 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog18 hydrog ? ? B DG 1 N2 ? ? ? 1_555 B DG  1 N7 ? ? B DG 5  B DG  5   4_565 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog19 hydrog ? ? B DG 1 N7 ? ? ? 1_555 B DG  1 N2 ? ? B DG 5  B DG  5   3_655 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog20 hydrog ? ? B DG 1 O6 ? ? ? 1_555 B DG  1 N1 ? ? B DG 5  B DG  5   3_655 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog21 hydrog ? ? B DG 2 N1 ? ? ? 1_555 B DG  2 O6 ? ? B DG 6  B DG  6   3_655 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog22 hydrog ? ? B DG 2 N2 ? ? ? 1_555 B DG  2 N7 ? ? B DG 6  B DG  6   3_655 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog23 hydrog ? ? B DG 2 N7 ? ? ? 1_555 B DG  2 N2 ? ? B DG 6  B DG  6   4_565 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog24 hydrog ? ? B DG 2 O6 ? ? ? 1_555 B DG  2 N1 ? ? B DG 6  B DG  6   4_565 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog25 hydrog ? ? B DG 3 N1 ? ? ? 1_555 B DG  3 O6 ? ? B DG 7  B DG  7   3_655 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog26 hydrog ? ? B DG 3 N2 ? ? ? 1_555 B DG  3 N7 ? ? B DG 7  B DG  7   3_655 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog27 hydrog ? ? B DG 3 N7 ? ? ? 1_555 B DG  3 N2 ? ? B DG 7  B DG  7   4_565 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog28 hydrog ? ? B DG 3 O6 ? ? ? 1_555 B DG  3 N1 ? ? B DG 7  B DG  7   4_565 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog29 hydrog ? ? B DG 4 N1 ? ? ? 1_555 B DG  4 O6 ? ? B DG 8  B DG  8   3_655 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog30 hydrog ? ? B DG 4 N2 ? ? ? 1_555 B DG  4 N7 ? ? B DG 8  B DG  8   3_655 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog31 hydrog ? ? B DG 4 N7 ? ? ? 1_555 B DG  4 N2 ? ? B DG 8  B DG  8   4_565 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
hydrog32 hydrog ? ? B DG 4 O6 ? ? ? 1_555 B DG  4 N1 ? ? B DG 8  B DG  8   4_565 ? ? ? ? ? ? TYPE_6_PAIR ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
metalc ? ? 
hydrog ? ? 
# 
loop_
_pdbx_struct_conn_angle.id 
_pdbx_struct_conn_angle.ptnr1_label_atom_id 
_pdbx_struct_conn_angle.ptnr1_label_alt_id 
_pdbx_struct_conn_angle.ptnr1_label_asym_id 
_pdbx_struct_conn_angle.ptnr1_label_comp_id 
_pdbx_struct_conn_angle.ptnr1_label_seq_id 
_pdbx_struct_conn_angle.ptnr1_auth_atom_id 
_pdbx_struct_conn_angle.ptnr1_auth_asym_id 
_pdbx_struct_conn_angle.ptnr1_auth_comp_id 
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr1_symmetry 
_pdbx_struct_conn_angle.ptnr2_label_atom_id 
_pdbx_struct_conn_angle.ptnr2_label_alt_id 
_pdbx_struct_conn_angle.ptnr2_label_asym_id 
_pdbx_struct_conn_angle.ptnr2_label_comp_id 
_pdbx_struct_conn_angle.ptnr2_label_seq_id 
_pdbx_struct_conn_angle.ptnr2_auth_atom_id 
_pdbx_struct_conn_angle.ptnr2_auth_asym_id 
_pdbx_struct_conn_angle.ptnr2_auth_comp_id 
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr2_symmetry 
_pdbx_struct_conn_angle.ptnr3_label_atom_id 
_pdbx_struct_conn_angle.ptnr3_label_alt_id 
_pdbx_struct_conn_angle.ptnr3_label_asym_id 
_pdbx_struct_conn_angle.ptnr3_label_comp_id 
_pdbx_struct_conn_angle.ptnr3_label_seq_id 
_pdbx_struct_conn_angle.ptnr3_auth_atom_id 
_pdbx_struct_conn_angle.ptnr3_auth_asym_id 
_pdbx_struct_conn_angle.ptnr3_auth_comp_id 
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr3_symmetry 
_pdbx_struct_conn_angle.value 
_pdbx_struct_conn_angle.value_esd 
1 O6 ? A DG  1 ? A DG  1   ? 1_555 NA ? E NA . ? A NA 13 ? 1_555 O6 ? A DG  2 ? A DG  2   ? 1_555 72.3 ? 
2 O6 ? A DG  2 ? A DG  2   ? 1_555 NA ? F NA . ? A NA 14 ? 1_555 O6 ? A DG  3 ? A DG  3   ? 1_555 75.8 ? 
3 O6 ? A DG  3 ? A DG  3   ? 1_555 NA ? G NA . ? A NA 15 ? 1_555 O6 ? A DG  4 ? A DG  4   ? 1_555 68.1 ? 
4 O6 ? B DG  1 ? B DG  5   ? 1_555 NA ? J NA . ? B NA 16 ? 1_555 O6 ? B DG  2 ? B DG  6   ? 1_555 72.8 ? 
5 O6 ? B DG  2 ? B DG  6   ? 1_555 NA ? K NA . ? B NA 17 ? 1_555 O6 ? B DG  3 ? B DG  7   ? 1_555 75.9 ? 
6 O6 ? B DG  3 ? B DG  7   ? 1_555 NA ? L NA . ? B NA 18 ? 1_555 O6 ? B DG  4 ? B DG  8   ? 1_555 68.9 ? 
7 O  ? R HOH . ? B HOH 109 ? 1_555 NA ? M NA . ? B NA 19 ? 1_555 O  ? R HOH . ? B HOH 110 ? 1_555 44.4 ? 
8 O  ? R HOH . ? B HOH 102 ? 1_555 MG ? P MG . ? B MG 22 ? 1_555 O  ? R HOH . ? B HOH 106 ? 1_555 91.7 ? 
# 
loop_
_struct_site.id 
_struct_site.pdbx_evidence_code 
_struct_site.pdbx_auth_asym_id 
_struct_site.pdbx_auth_comp_id 
_struct_site.pdbx_auth_seq_id 
_struct_site.pdbx_auth_ins_code 
_struct_site.pdbx_num_residues 
_struct_site.details 
AC1 Software A DM1 9  ? 6  'BINDING SITE FOR RESIDUE DM1 A 9'  
AC2 Software A DM1 10 ? 10 'BINDING SITE FOR RESIDUE DM1 A 10' 
AC3 Software A NA  13 ? 3  'BINDING SITE FOR RESIDUE NA A 13'  
AC4 Software A NA  14 ? 4  'BINDING SITE FOR RESIDUE NA A 14'  
AC5 Software A NA  15 ? 3  'BINDING SITE FOR RESIDUE NA A 15'  
AC6 Software B DM1 11 ? 8  'BINDING SITE FOR RESIDUE DM1 B 11' 
AC7 Software B DM1 12 ? 10 'BINDING SITE FOR RESIDUE DM1 B 12' 
AC8 Software B NA  16 ? 4  'BINDING SITE FOR RESIDUE NA B 16'  
AC9 Software B NA  17 ? 4  'BINDING SITE FOR RESIDUE NA B 17'  
BC1 Software B NA  18 ? 3  'BINDING SITE FOR RESIDUE NA B 18'  
BC2 Software B NA  19 ? 2  'BINDING SITE FOR RESIDUE NA B 19'  
BC4 Software B MG  21 ? 1  'BINDING SITE FOR RESIDUE MG B 21'  
BC5 Software B MG  22 ? 4  'BINDING SITE FOR RESIDUE MG B 22'  
1   ?        ? ?   ?  ? ?  ?                                   
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1  AC1 6  DG  A 1 ? DG  A 1   . ? 1_555 ? 
2  AC1 6  DG  A 2 ? DG  A 2   . ? 1_555 ? 
3  AC1 6  DM1 D . ? DM1 A 10  . ? 1_555 ? 
4  AC1 6  HOH Q . ? HOH A 123 . ? 1_555 ? 
5  AC1 6  HOH Q . ? HOH A 149 . ? 1_555 ? 
6  AC1 6  HOH Q . ? HOH A 201 . ? 1_555 ? 
7  AC2 10 DM1 C . ? DM1 A 9   . ? 1_555 ? 
8  AC2 10 HOH Q . ? HOH A 123 . ? 1_555 ? 
9  AC2 10 HOH Q . ? HOH A 127 . ? 1_555 ? 
10 AC2 10 HOH Q . ? HOH A 128 . ? 1_555 ? 
11 AC2 10 HOH Q . ? HOH A 151 . ? 1_555 ? 
12 AC2 10 HOH Q . ? HOH A 179 . ? 1_555 ? 
13 AC2 10 HOH Q . ? HOH A 187 . ? 1_555 ? 
14 AC2 10 HOH Q . ? HOH A 200 . ? 1_555 ? 
15 AC2 10 HOH Q . ? HOH A 201 . ? 1_555 ? 
16 AC2 10 DM1 H . ? DM1 B 11  . ? 1_555 ? 
17 AC3 3  DG  A 1 ? DG  A 1   . ? 1_555 ? 
18 AC3 3  DG  A 2 ? DG  A 2   . ? 1_555 ? 
19 AC3 3  NA  F . ? NA  A 14  . ? 1_555 ? 
20 AC4 4  DG  A 2 ? DG  A 2   . ? 1_555 ? 
21 AC4 4  DG  A 3 ? DG  A 3   . ? 1_555 ? 
22 AC4 4  NA  E . ? NA  A 13  . ? 1_555 ? 
23 AC4 4  NA  G . ? NA  A 15  . ? 1_555 ? 
24 AC5 3  DG  A 3 ? DG  A 3   . ? 1_555 ? 
25 AC5 3  DG  A 4 ? DG  A 4   . ? 1_555 ? 
26 AC5 3  NA  F . ? NA  A 14  . ? 1_555 ? 
27 AC6 8  DM1 D . ? DM1 A 10  . ? 1_555 ? 
28 AC6 8  DM1 I . ? DM1 B 12  . ? 1_555 ? 
29 AC6 8  HOH R . ? HOH B 113 . ? 1_555 ? 
30 AC6 8  HOH R . ? HOH B 125 . ? 1_555 ? 
31 AC6 8  HOH R . ? HOH B 126 . ? 1_555 ? 
32 AC6 8  HOH R . ? HOH B 132 . ? 1_555 ? 
33 AC6 8  HOH R . ? HOH B 140 . ? 1_555 ? 
34 AC6 8  HOH R . ? HOH B 170 . ? 1_555 ? 
35 AC7 10 DG  B 1 ? DG  B 5   . ? 1_555 ? 
36 AC7 10 DG  B 2 ? DG  B 6   . ? 1_555 ? 
37 AC7 10 DM1 H . ? DM1 B 11  . ? 1_555 ? 
38 AC7 10 HOH R . ? HOH B 102 . ? 1_555 ? 
39 AC7 10 HOH R . ? HOH B 113 . ? 1_555 ? 
40 AC7 10 HOH R . ? HOH B 145 . ? 1_555 ? 
41 AC7 10 HOH R . ? HOH B 150 . ? 1_555 ? 
42 AC7 10 HOH R . ? HOH B 159 . ? 1_555 ? 
43 AC7 10 HOH R . ? HOH B 162 . ? 1_555 ? 
44 AC7 10 HOH R . ? HOH B 198 . ? 1_555 ? 
45 AC8 4  DG  B 1 ? DG  B 5   . ? 1_555 ? 
46 AC8 4  DG  B 2 ? DG  B 6   . ? 1_555 ? 
47 AC8 4  NA  K . ? NA  B 17  . ? 1_555 ? 
48 AC8 4  MG  P . ? MG  B 22  . ? 1_555 ? 
49 AC9 4  DG  B 2 ? DG  B 6   . ? 1_555 ? 
50 AC9 4  DG  B 3 ? DG  B 7   . ? 1_555 ? 
51 AC9 4  NA  J . ? NA  B 16  . ? 1_555 ? 
52 AC9 4  NA  L . ? NA  B 18  . ? 1_555 ? 
53 BC1 3  DG  B 3 ? DG  B 7   . ? 1_555 ? 
54 BC1 3  DG  B 4 ? DG  B 8   . ? 1_555 ? 
55 BC1 3  NA  K . ? NA  B 17  . ? 1_555 ? 
56 BC2 2  HOH R . ? HOH B 109 . ? 1_555 ? 
57 BC2 2  HOH R . ? HOH B 110 . ? 1_555 ? 
58 BC4 1  HOH R . ? HOH B 111 . ? 1_555 ? 
59 BC5 4  DG  B 1 ? DG  B 5   . ? 1_555 ? 
60 BC5 4  NA  J . ? NA  B 16  . ? 1_555 ? 
61 BC5 4  HOH R . ? HOH B 102 . ? 1_555 ? 
62 BC5 4  HOH R . ? HOH B 106 . ? 1_555 ? 
# 
_pdbx_validate_close_contact.id               1 
_pdbx_validate_close_contact.PDB_model_num    1 
_pdbx_validate_close_contact.auth_atom_id_1   O 
_pdbx_validate_close_contact.auth_asym_id_1   B 
_pdbx_validate_close_contact.auth_comp_id_1   HOH 
_pdbx_validate_close_contact.auth_seq_id_1    199 
_pdbx_validate_close_contact.PDB_ins_code_1   ? 
_pdbx_validate_close_contact.label_alt_id_1   ? 
_pdbx_validate_close_contact.auth_atom_id_2   O 
_pdbx_validate_close_contact.auth_asym_id_2   B 
_pdbx_validate_close_contact.auth_comp_id_2   HOH 
_pdbx_validate_close_contact.auth_seq_id_2    203 
_pdbx_validate_close_contact.PDB_ins_code_2   ? 
_pdbx_validate_close_contact.label_alt_id_2   ? 
_pdbx_validate_close_contact.dist             2.17 
# 
loop_
_pdbx_validate_rmsd_bond.id 
_pdbx_validate_rmsd_bond.PDB_model_num 
_pdbx_validate_rmsd_bond.auth_atom_id_1 
_pdbx_validate_rmsd_bond.auth_asym_id_1 
_pdbx_validate_rmsd_bond.auth_comp_id_1 
_pdbx_validate_rmsd_bond.auth_seq_id_1 
_pdbx_validate_rmsd_bond.PDB_ins_code_1 
_pdbx_validate_rmsd_bond.label_alt_id_1 
_pdbx_validate_rmsd_bond.auth_atom_id_2 
_pdbx_validate_rmsd_bond.auth_asym_id_2 
_pdbx_validate_rmsd_bond.auth_comp_id_2 
_pdbx_validate_rmsd_bond.auth_seq_id_2 
_pdbx_validate_rmsd_bond.PDB_ins_code_2 
_pdbx_validate_rmsd_bond.label_alt_id_2 
_pdbx_validate_rmsd_bond.bond_value 
_pdbx_validate_rmsd_bond.bond_target_value 
_pdbx_validate_rmsd_bond.bond_deviation 
_pdbx_validate_rmsd_bond.bond_standard_deviation 
_pdbx_validate_rmsd_bond.linker_flag 
1  1 N1    A DG 1 ? ? C2    A DG 1 ? ? 1.422 1.373 0.049  0.008 N 
2  1 C4    A DG 1 ? ? C5    A DG 1 ? ? 1.434 1.379 0.055  0.007 N 
3  1 C5    A DG 1 ? ? C6    A DG 1 ? ? 1.343 1.419 -0.076 0.010 N 
4  1 C5    A DG 1 ? ? N7    A DG 1 ? ? 1.347 1.388 -0.041 0.006 N 
5  1 N7    A DG 1 ? ? C8    A DG 1 ? ? 1.395 1.305 0.090  0.006 N 
6  1 N9    A DG 1 ? ? C4    A DG 1 ? ? 1.317 1.375 -0.058 0.008 N 
7  1 "C5'" A DG 2 ? ? "C4'" A DG 2 ? ? 1.574 1.512 0.062  0.007 N 
8  1 N1    A DG 2 ? ? C2    A DG 2 ? ? 1.422 1.373 0.049  0.008 N 
9  1 C6    A DG 2 ? ? N1    A DG 2 ? ? 1.346 1.391 -0.045 0.007 N 
10 1 C8    A DG 2 ? ? N9    A DG 2 ? ? 1.319 1.374 -0.055 0.007 N 
11 1 P     A DG 3 ? ? OP2   A DG 3 ? ? 1.367 1.485 -0.118 0.017 N 
12 1 P     A DG 3 ? ? "O5'" A DG 3 ? ? 1.516 1.593 -0.077 0.010 N 
13 1 "C5'" A DG 3 ? ? "C4'" A DG 3 ? ? 1.442 1.509 -0.067 0.011 N 
14 1 "O3'" A DG 3 ? ? "C3'" A DG 3 ? ? 1.594 1.435 0.159  0.013 N 
15 1 N1    A DG 3 ? ? C2    A DG 3 ? ? 1.425 1.373 0.052  0.008 N 
16 1 C5    A DG 3 ? ? C6    A DG 3 ? ? 1.491 1.419 0.072  0.010 N 
17 1 C8    A DG 3 ? ? N9    A DG 3 ? ? 1.420 1.374 0.046  0.007 N 
18 1 P     A DG 4 ? ? OP1   A DG 4 ? ? 1.588 1.485 0.103  0.017 N 
19 1 "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? 1.446 1.521 -0.075 0.010 N 
20 1 "O4'" A DG 4 ? ? "C4'" A DG 4 ? ? 1.515 1.449 0.066  0.009 N 
21 1 N1    A DG 4 ? ? C2    A DG 4 ? ? 1.436 1.373 0.063  0.008 N 
22 1 C6    A DG 4 ? ? N1    A DG 4 ? ? 1.293 1.391 -0.098 0.007 N 
23 1 C8    A DG 4 ? ? N9    A DG 4 ? ? 1.466 1.374 0.092  0.007 N 
24 1 C2    A DG 4 ? ? N2    A DG 4 ? ? 1.271 1.341 -0.070 0.010 N 
25 1 "C5'" B DG 5 ? ? "C4'" B DG 5 ? ? 1.442 1.509 -0.067 0.011 N 
26 1 "C3'" B DG 6 ? ? "C2'" B DG 6 ? ? 1.455 1.516 -0.061 0.008 N 
27 1 C2    B DG 7 ? ? N3    B DG 7 ? ? 1.402 1.323 0.079  0.008 N 
28 1 C5    B DG 7 ? ? N7    B DG 7 ? ? 1.346 1.388 -0.042 0.006 N 
29 1 N7    B DG 7 ? ? C8    B DG 7 ? ? 1.352 1.305 0.047  0.006 N 
30 1 "C5'" B DG 8 ? ? "C4'" B DG 8 ? ? 1.366 1.509 -0.143 0.011 N 
31 1 "C3'" B DG 8 ? ? "C2'" B DG 8 ? ? 1.596 1.518 0.078  0.012 N 
32 1 N3    B DG 8 ? ? C4    B DG 8 ? ? 1.291 1.350 -0.059 0.007 N 
33 1 C4    B DG 8 ? ? C5    B DG 8 ? ? 1.426 1.379 0.047  0.007 N 
34 1 C2    B DG 8 ? ? N2    B DG 8 ? ? 1.232 1.341 -0.109 0.010 N 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1  1 N1    A DG 1 ? ? C2    A DG 1 ? ? N3    A DG 1 ? ? 119.73 123.90 -4.17  0.60 N 
2  1 C2    A DG 1 ? ? N3    A DG 1 ? ? C4    A DG 1 ? ? 117.12 111.90 5.22   0.50 N 
3  1 N3    A DG 1 ? ? C4    A DG 1 ? ? C5    A DG 1 ? ? 125.03 128.60 -3.57  0.50 N 
4  1 N7    A DG 1 ? ? C8    A DG 1 ? ? N9    A DG 1 ? ? 109.71 113.10 -3.39  0.50 N 
5  1 C8    A DG 1 ? ? N9    A DG 1 ? ? C4    A DG 1 ? ? 110.01 106.40 3.61   0.40 N 
6  1 C4    A DG 2 ? ? C5    A DG 2 ? ? N7    A DG 2 ? ? 113.48 110.80 2.68   0.40 N 
7  1 C5    A DG 2 ? ? N7    A DG 2 ? ? C8    A DG 2 ? ? 100.88 104.30 -3.42  0.50 N 
8  1 N9    A DG 2 ? ? C4    A DG 2 ? ? C5    A DG 2 ? ? 102.82 105.40 -2.58  0.40 N 
9  1 C5    A DG 2 ? ? C6    A DG 2 ? ? O6    A DG 2 ? ? 124.06 128.60 -4.54  0.60 N 
10 1 C2    A DG 3 ? ? N3    A DG 3 ? ? C4    A DG 3 ? ? 115.79 111.90 3.89   0.50 N 
11 1 N7    A DG 3 ? ? C8    A DG 3 ? ? N9    A DG 3 ? ? 108.02 113.10 -5.08  0.50 N 
12 1 C8    A DG 3 ? ? N9    A DG 3 ? ? C4    A DG 3 ? ? 109.42 106.40 3.02   0.40 N 
13 1 "O5'" A DG 4 ? ? "C5'" A DG 4 ? ? "C4'" A DG 4 ? ? 100.49 109.40 -8.91  0.80 N 
14 1 P     A DG 4 ? ? "O5'" A DG 4 ? ? "C5'" A DG 4 ? ? 110.68 120.90 -10.22 1.60 N 
15 1 "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? 110.33 103.10 7.23   0.90 N 
16 1 "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? "C1'" A DG 4 ? ? 95.32  102.40 -7.08  0.80 N 
17 1 N1    A DG 4 ? ? C2    A DG 4 ? ? N3    A DG 4 ? ? 118.73 123.90 -5.17  0.60 N 
18 1 C2    A DG 4 ? ? N3    A DG 4 ? ? C4    A DG 4 ? ? 115.09 111.90 3.19   0.50 N 
19 1 N7    A DG 4 ? ? C8    A DG 4 ? ? N9    A DG 4 ? ? 109.45 113.10 -3.65  0.50 N 
20 1 N3    A DG 4 ? ? C2    A DG 4 ? ? N2    A DG 4 ? ? 124.96 119.90 5.06   0.70 N 
21 1 "C3'" B DG 5 ? ? "C2'" B DG 5 ? ? "C1'" B DG 5 ? ? 96.85  102.40 -5.55  0.80 N 
22 1 N1    B DG 5 ? ? C2    B DG 5 ? ? N3    B DG 5 ? ? 120.27 123.90 -3.63  0.60 N 
23 1 C2    B DG 5 ? ? N3    B DG 5 ? ? C4    B DG 5 ? ? 116.04 111.90 4.14   0.50 N 
24 1 N3    B DG 5 ? ? C2    B DG 5 ? ? N2    B DG 5 ? ? 124.63 119.90 4.73   0.70 N 
25 1 C4    B DG 6 ? ? C5    B DG 6 ? ? N7    B DG 6 ? ? 113.35 110.80 2.55   0.40 N 
26 1 "O5'" B DG 7 ? ? "C5'" B DG 7 ? ? "C4'" B DG 7 ? ? 104.60 109.40 -4.80  0.80 N 
27 1 "C3'" B DG 8 ? ? "C2'" B DG 8 ? ? "C1'" B DG 8 ? ? 97.32  102.40 -5.08  0.80 N 
28 1 "O4'" B DG 8 ? ? "C1'" B DG 8 ? ? N9    B DG 8 ? ? 103.09 108.00 -4.91  0.70 N 
29 1 N1    B DG 8 ? ? C2    B DG 8 ? ? N3    B DG 8 ? ? 117.07 123.90 -6.83  0.60 N 
30 1 C2    B DG 8 ? ? N3    B DG 8 ? ? C4    B DG 8 ? ? 118.43 111.90 6.53   0.50 N 
31 1 C5    B DG 8 ? ? N7    B DG 8 ? ? C8    B DG 8 ? ? 107.43 104.30 3.13   0.50 N 
32 1 C8    B DG 8 ? ? N9    B DG 8 ? ? C4    B DG 8 ? ? 109.20 106.40 2.80   0.40 N 
33 1 N9    B DG 8 ? ? C4    B DG 8 ? ? C5    B DG 8 ? ? 102.58 105.40 -2.82  0.40 N 
34 1 N3    B DG 8 ? ? C4    B DG 8 ? ? N9    B DG 8 ? ? 130.69 126.00 4.69   0.60 N 
# 
_struct_site_keywords.site_id   1 
_struct_site_keywords.text      'OUTSIDE BINDER' 
# 
loop_
_pdbx_struct_special_symmetry.id 
_pdbx_struct_special_symmetry.PDB_model_num 
_pdbx_struct_special_symmetry.auth_asym_id 
_pdbx_struct_special_symmetry.auth_comp_id 
_pdbx_struct_special_symmetry.auth_seq_id 
_pdbx_struct_special_symmetry.PDB_ins_code 
_pdbx_struct_special_symmetry.label_asym_id 
_pdbx_struct_special_symmetry.label_comp_id 
_pdbx_struct_special_symmetry.label_seq_id 
1  1 A NA  13  ? E NA  . 
2  1 A NA  14  ? F NA  . 
3  1 A NA  15  ? G NA  . 
4  1 B NA  16  ? J NA  . 
5  1 B NA  17  ? K NA  . 
6  1 B NA  18  ? L NA  . 
7  1 B NA  19  ? M NA  . 
8  1 B NA  20  ? N NA  . 
9  1 B MG  21  ? O MG  . 
10 1 B MG  22  ? P MG  . 
11 1 A HOH 101 ? Q HOH . 
12 1 A HOH 103 ? Q HOH . 
13 1 B HOH 106 ? R HOH . 
# 
loop_
_pdbx_distant_solvent_atoms.id 
_pdbx_distant_solvent_atoms.PDB_model_num 
_pdbx_distant_solvent_atoms.auth_atom_id 
_pdbx_distant_solvent_atoms.label_alt_id 
_pdbx_distant_solvent_atoms.auth_asym_id 
_pdbx_distant_solvent_atoms.auth_comp_id 
_pdbx_distant_solvent_atoms.auth_seq_id 
_pdbx_distant_solvent_atoms.PDB_ins_code 
_pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 
_pdbx_distant_solvent_atoms.neighbor_ligand_distance 
1 1 O ? B HOH 111 ? 7.01 .    
2 1 O ? B HOH 178 ? .    6.45 
3 1 O ? B HOH 196 ? 6.99 .    
4 1 O ? B HOH 206 ? .    7.29 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
DG  OP3    O  N N 1   
DG  P      P  N N 2   
DG  OP1    O  N N 3   
DG  OP2    O  N N 4   
DG  "O5'"  O  N N 5   
DG  "C5'"  C  N N 6   
DG  "C4'"  C  N R 7   
DG  "O4'"  O  N N 8   
DG  "C3'"  C  N S 9   
DG  "O3'"  O  N N 10  
DG  "C2'"  C  N N 11  
DG  "C1'"  C  N R 12  
DG  N9     N  Y N 13  
DG  C8     C  Y N 14  
DG  N7     N  Y N 15  
DG  C5     C  Y N 16  
DG  C6     C  N N 17  
DG  O6     O  N N 18  
DG  N1     N  N N 19  
DG  C2     C  N N 20  
DG  N2     N  N N 21  
DG  N3     N  N N 22  
DG  C4     C  Y N 23  
DG  HOP3   H  N N 24  
DG  HOP2   H  N N 25  
DG  "H5'"  H  N N 26  
DG  "H5''" H  N N 27  
DG  "H4'"  H  N N 28  
DG  "H3'"  H  N N 29  
DG  "HO3'" H  N N 30  
DG  "H2'"  H  N N 31  
DG  "H2''" H  N N 32  
DG  "H1'"  H  N N 33  
DG  H8     H  N N 34  
DG  H1     H  N N 35  
DG  H21    H  N N 36  
DG  H22    H  N N 37  
DM1 C1     C  Y N 38  
DM1 C2     C  Y N 39  
DM1 C3     C  Y N 40  
DM1 C4     C  Y N 41  
DM1 O4     O  N N 42  
DM1 C5     C  Y N 43  
DM1 C6     C  N N 44  
DM1 O6     O  N N 45  
DM1 C7     C  Y N 46  
DM1 C8     C  Y N 47  
DM1 O8     O  N N 48  
DM1 C9     C  Y N 49  
DM1 C10    C  N S 50  
DM1 O10    O  N N 51  
DM1 C11    C  N N 52  
DM1 C12    C  N S 53  
DM1 O12    O  N N 54  
DM1 C13    C  N N 55  
DM1 O13    O  N N 56  
DM1 C14    C  N N 57  
DM1 C15    C  N N 58  
DM1 C16    C  Y N 59  
DM1 C17    C  Y N 60  
DM1 O17    O  N N 61  
DM1 C18    C  Y N 62  
DM1 C19    C  N N 63  
DM1 O19    O  N N 64  
DM1 C20    C  Y N 65  
DM1 C21    C  N N 66  
DM1 "C1'"  C  N R 67  
DM1 "C2'"  C  N N 68  
DM1 "C3'"  C  N S 69  
DM1 "N3'"  N  N N 70  
DM1 "C4'"  C  N S 71  
DM1 "O4'"  O  N N 72  
DM1 "C5'"  C  N S 73  
DM1 "O5'"  O  N N 74  
DM1 "C6'"  C  N N 75  
DM1 H1     H  N N 76  
DM1 H2     H  N N 77  
DM1 H3     H  N N 78  
DM1 HO8    H  N N 79  
DM1 H10    H  N N 80  
DM1 H111   H  N N 81  
DM1 H112   H  N N 82  
DM1 HO12   H  N N 83  
DM1 H141   H  N N 84  
DM1 H142   H  N N 85  
DM1 H143   H  N N 86  
DM1 H151   H  N N 87  
DM1 H152   H  N N 88  
DM1 HO17   H  N N 89  
DM1 H211   H  N N 90  
DM1 H212   H  N N 91  
DM1 H213   H  N N 92  
DM1 "H1'"  H  N N 93  
DM1 "H2'1" H  N N 94  
DM1 "H2'2" H  N N 95  
DM1 "H3'"  H  N N 96  
DM1 "HN'1" H  N N 97  
DM1 "HN'2" H  N N 98  
DM1 "H4'"  H  N N 99  
DM1 "HO4'" H  N N 100 
DM1 "H5'"  H  N N 101 
DM1 "H6'1" H  N N 102 
DM1 "H6'2" H  N N 103 
DM1 "H6'3" H  N N 104 
HOH O      O  N N 105 
HOH H1     H  N N 106 
HOH H2     H  N N 107 
MG  MG     MG N N 108 
NA  NA     NA N N 109 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DG  OP3   P      sing N N 1   
DG  OP3   HOP3   sing N N 2   
DG  P     OP1    doub N N 3   
DG  P     OP2    sing N N 4   
DG  P     "O5'"  sing N N 5   
DG  OP2   HOP2   sing N N 6   
DG  "O5'" "C5'"  sing N N 7   
DG  "C5'" "C4'"  sing N N 8   
DG  "C5'" "H5'"  sing N N 9   
DG  "C5'" "H5''" sing N N 10  
DG  "C4'" "O4'"  sing N N 11  
DG  "C4'" "C3'"  sing N N 12  
DG  "C4'" "H4'"  sing N N 13  
DG  "O4'" "C1'"  sing N N 14  
DG  "C3'" "O3'"  sing N N 15  
DG  "C3'" "C2'"  sing N N 16  
DG  "C3'" "H3'"  sing N N 17  
DG  "O3'" "HO3'" sing N N 18  
DG  "C2'" "C1'"  sing N N 19  
DG  "C2'" "H2'"  sing N N 20  
DG  "C2'" "H2''" sing N N 21  
DG  "C1'" N9     sing N N 22  
DG  "C1'" "H1'"  sing N N 23  
DG  N9    C8     sing Y N 24  
DG  N9    C4     sing Y N 25  
DG  C8    N7     doub Y N 26  
DG  C8    H8     sing N N 27  
DG  N7    C5     sing Y N 28  
DG  C5    C6     sing N N 29  
DG  C5    C4     doub Y N 30  
DG  C6    O6     doub N N 31  
DG  C6    N1     sing N N 32  
DG  N1    C2     sing N N 33  
DG  N1    H1     sing N N 34  
DG  C2    N2     sing N N 35  
DG  C2    N3     doub N N 36  
DG  N2    H21    sing N N 37  
DG  N2    H22    sing N N 38  
DG  N3    C4     sing N N 39  
DM1 C1    C2     doub Y N 40  
DM1 C1    C20    sing Y N 41  
DM1 C1    H1     sing N N 42  
DM1 C2    C3     sing Y N 43  
DM1 C2    H2     sing N N 44  
DM1 C3    C4     doub Y N 45  
DM1 C3    H3     sing N N 46  
DM1 C4    O4     sing N N 47  
DM1 C4    C5     sing Y N 48  
DM1 O4    C21    sing N N 49  
DM1 C5    C6     sing N N 50  
DM1 C5    C20    doub Y N 51  
DM1 C6    O6     doub N N 52  
DM1 C6    C7     sing N N 53  
DM1 C7    C8     doub Y N 54  
DM1 C7    C18    sing Y N 55  
DM1 C8    O8     sing N N 56  
DM1 C8    C9     sing Y N 57  
DM1 O8    HO8    sing N N 58  
DM1 C9    C10    sing N N 59  
DM1 C9    C16    doub Y N 60  
DM1 C10   O10    sing N N 61  
DM1 C10   C11    sing N N 62  
DM1 C10   H10    sing N N 63  
DM1 O10   "C1'"  sing N N 64  
DM1 C11   C12    sing N N 65  
DM1 C11   H111   sing N N 66  
DM1 C11   H112   sing N N 67  
DM1 C12   O12    sing N N 68  
DM1 C12   C13    sing N N 69  
DM1 C12   C15    sing N N 70  
DM1 O12   HO12   sing N N 71  
DM1 C13   O13    doub N N 72  
DM1 C13   C14    sing N N 73  
DM1 C14   H141   sing N N 74  
DM1 C14   H142   sing N N 75  
DM1 C14   H143   sing N N 76  
DM1 C15   C16    sing N N 77  
DM1 C15   H151   sing N N 78  
DM1 C15   H152   sing N N 79  
DM1 C16   C17    sing Y N 80  
DM1 C17   O17    sing N N 81  
DM1 C17   C18    doub Y N 82  
DM1 O17   HO17   sing N N 83  
DM1 C18   C19    sing N N 84  
DM1 C19   O19    doub N N 85  
DM1 C19   C20    sing N N 86  
DM1 C21   H211   sing N N 87  
DM1 C21   H212   sing N N 88  
DM1 C21   H213   sing N N 89  
DM1 "C1'" "C2'"  sing N N 90  
DM1 "C1'" "O5'"  sing N N 91  
DM1 "C1'" "H1'"  sing N N 92  
DM1 "C2'" "C3'"  sing N N 93  
DM1 "C2'" "H2'1" sing N N 94  
DM1 "C2'" "H2'2" sing N N 95  
DM1 "C3'" "N3'"  sing N N 96  
DM1 "C3'" "C4'"  sing N N 97  
DM1 "C3'" "H3'"  sing N N 98  
DM1 "N3'" "HN'1" sing N N 99  
DM1 "N3'" "HN'2" sing N N 100 
DM1 "C4'" "O4'"  sing N N 101 
DM1 "C4'" "C5'"  sing N N 102 
DM1 "C4'" "H4'"  sing N N 103 
DM1 "O4'" "HO4'" sing N N 104 
DM1 "C5'" "O5'"  sing N N 105 
DM1 "C5'" "C6'"  sing N N 106 
DM1 "C5'" "H5'"  sing N N 107 
DM1 "C6'" "H6'1" sing N N 108 
DM1 "C6'" "H6'2" sing N N 109 
DM1 "C6'" "H6'3" sing N N 110 
HOH O     H1     sing N N 111 
HOH O     H2     sing N N 112 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
3TVB 'double helix' 
3TVB 'triple helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DG 1 1_555 A DG 1 3_655 1.709  3.408  0.092  0.746   2.708   -89.966 1  A_DG1:DG1_A A 1 ? A 1 ? 6 3 
1 A DG 2 1_555 A DG 2 3_655 -1.435 -3.520 0.281  0.637   8.849   89.655  2  A_DG2:DG2_A A 2 ? A 2 ? 6 3 
1 A DG 3 1_555 A DG 3 3_655 -1.561 -3.477 0.049  -4.281  3.527   89.866  3  A_DG3:DG3_A A 3 ? A 3 ? 6 3 
1 A DG 4 1_555 A DG 4 3_655 -1.525 -3.536 0.165  -12.664 10.713  88.782  4  A_DG4:DG4_A A 4 ? A 4 ? 6 3 
1 A DG 1 1_555 A DG 1 4_565 -1.709 -3.408 -0.092 -0.746  -2.708  89.966  5  A_DG1:DG1_A A 1 ? A 1 ? 6 3 
1 A DG 2 1_555 A DG 2 4_565 1.435  3.520  -0.281 -0.637  -8.849  -89.655 6  A_DG2:DG2_A A 2 ? A 2 ? 6 3 
1 A DG 3 1_555 A DG 3 4_565 1.561  3.477  -0.049 4.281   -3.527  -89.866 7  A_DG3:DG3_A A 3 ? A 3 ? 6 3 
1 A DG 4 1_555 A DG 4 4_565 1.525  3.536  -0.165 12.664  -10.713 -88.782 8  A_DG4:DG4_A A 4 ? A 4 ? 6 3 
1 B DG 1 1_555 B DG 1 3_655 -1.666 -3.440 -0.069 -1.036  -1.804  89.981  9  B_DG5:DG5_B B 5 ? B 5 ? 6 3 
1 B DG 2 1_555 B DG 2 3_655 1.450  3.511  -0.259 -1.290  -7.899  -89.720 10 B_DG6:DG6_B B 6 ? B 6 ? 6 3 
1 B DG 3 1_555 B DG 3 3_655 1.479  3.517  -0.038 3.668   -2.795  -89.907 11 B_DG7:DG7_B B 7 ? B 7 ? 6 3 
1 B DG 4 1_555 B DG 4 3_655 1.588  3.471  -0.160 12.354  -10.834 -88.805 12 B_DG8:DG8_B B 8 ? B 8 ? 6 3 
1 B DG 1 1_555 B DG 1 4_565 1.666  3.440  0.069  1.036   1.804   -89.981 13 B_DG5:DG5_B B 5 ? B 5 ? 6 3 
1 B DG 2 1_555 B DG 2 4_565 -1.450 -3.511 0.259  1.290   7.899   89.720  14 B_DG6:DG6_B B 6 ? B 6 ? 6 3 
1 B DG 3 1_555 B DG 3 4_565 -1.479 -3.517 0.038  -3.668  2.795   89.907  15 B_DG7:DG7_B B 7 ? B 7 ? 6 3 
1 B DG 4 1_555 B DG 4 4_565 -1.588 -3.471 0.160  -12.354 10.834  88.805  16 B_DG8:DG8_B B 8 ? B 8 ? 6 3 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DG 1 1_555 A DG 1 3_655 A DG 2 1_555 A DG 2 3_655 2.212  2.868  1.751 -79.620 156.662 -81.060 -1.785 0.928 -0.043 -78.996 
-40.148 -176.757 1  AA_DG1DG2:DG2DG1_AA A 1 ? A 1 ? A 2 ? A 2 ? 
1 A DG 2 1_555 A DG 2 3_655 A DG 3 1_555 A DG 3 3_655 -0.446 -0.828 3.354 -3.092  4.188   34.366  -2.037 0.266 3.260  7.038   
5.196   34.746   2  AA_DG2DG3:DG3DG2_AA A 2 ? A 2 ? A 3 ? A 3 ? 
1 A DG 3 1_555 A DG 3 3_655 A DG 4 1_555 A DG 4 3_655 -0.570 -0.522 3.078 1.956   5.544   21.882  -3.171 2.100 2.800  14.277  
-5.038  22.649   3  AA_DG3DG4:DG4DG3_AA A 3 ? A 3 ? A 4 ? A 4 ? 
1 A DG 1 1_555 A DG 1 4_565 A DG 2 1_555 A DG 2 4_565 2.212  2.868  1.751 -79.620 156.662 -81.060 -1.785 0.928 -0.043 -78.996 
-40.148 -176.757 4  AA_DG1DG2:DG2DG1_AA A 1 ? A 1 ? A 2 ? A 2 ? 
1 A DG 2 1_555 A DG 2 4_565 A DG 3 1_555 A DG 3 4_565 -0.446 -0.828 3.354 -3.092  4.188   34.366  -2.037 0.266 3.260  7.038   
5.196   34.746   5  AA_DG2DG3:DG3DG2_AA A 2 ? A 2 ? A 3 ? A 3 ? 
1 A DG 3 1_555 A DG 3 4_565 A DG 4 1_555 A DG 4 4_565 -0.570 -0.522 3.078 1.956   5.544   21.882  -3.171 2.100 2.800  14.277  
-5.038  22.649   6  AA_DG3DG4:DG4DG3_AA A 3 ? A 3 ? A 4 ? A 4 ? 
1 B DG 1 1_555 B DG 1 3_655 B DG 2 1_555 B DG 2 3_655 2.261  2.855  1.810 -77.622 157.767 -80.164 -1.800 0.948 -0.030 -79.550 
-39.139 -176.809 7  BB_DG5DG6:DG6DG5_BB B 5 ? B 5 ? B 6 ? B 6 ? 
1 B DG 2 1_555 B DG 2 3_655 B DG 3 1_555 B DG 3 3_655 -0.434 -0.874 3.353 -2.795  3.921   33.462  -2.147 0.287 3.257  6.767   
4.823   33.797   8  BB_DG6DG7:DG7DG6_BB B 6 ? B 6 ? B 7 ? B 7 ? 
1 B DG 3 1_555 B DG 3 3_655 B DG 4 1_555 B DG 4 3_655 -0.525 -0.505 3.067 2.351   5.709   23.376  -2.865 1.938 2.800  13.784  
-5.678  24.167   9  BB_DG7DG8:DG8DG7_BB B 7 ? B 7 ? B 8 ? B 8 ? 
1 B DG 1 1_555 B DG 1 4_565 B DG 2 1_555 B DG 2 4_565 2.261  2.855  1.810 -77.622 157.767 -80.164 -1.800 0.948 -0.030 -79.550 
-39.139 -176.809 10 BB_DG5DG6:DG6DG5_BB B 5 ? B 5 ? B 6 ? B 6 ? 
1 B DG 2 1_555 B DG 2 4_565 B DG 3 1_555 B DG 3 4_565 -0.434 -0.874 3.353 -2.795  3.921   33.462  -2.147 0.287 3.257  6.767   
4.823   33.797   11 BB_DG6DG7:DG7DG6_BB B 6 ? B 6 ? B 7 ? B 7 ? 
1 B DG 3 1_555 B DG 3 4_565 B DG 4 1_555 B DG 4 4_565 -0.525 -0.505 3.067 2.351   5.709   23.376  -2.865 1.938 2.800  13.784  
-5.678  24.167   12 BB_DG7DG8:DG8DG7_BB B 7 ? B 7 ? B 8 ? B 8 ? 
# 
_atom_sites.entry_id                    3TVB 
_atom_sites.fract_transf_matrix[1][1]   0.024870 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.024870 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.020068 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C  
MG 
N  
NA 
O  
P  
# 
loop_