HEADER OXIDOREDUCTASE 22-SEP-11 3TX1 TITLE X-RAY CRYSTAL STRUCTURE OF LISTERIA MONOCYTOGENES EGD-E UDP-N- TITLE 2 ACETYLENOLPYRUVYLGLUCOSAMINE REDUCTASE (MURB) COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-N-ACETYLENOLPYRUVOYLGLUCOSAMINE REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: UDP-N-ACETYLMURAMATE DEHYDROGENASE; COMPND 5 EC: 1.1.1.158; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES; SOURCE 3 ORGANISM_TAXID: 1639; SOURCE 4 GENE: LMO1420, MURB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: KRX; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR E.V.FILIPPOVA,G.MINASOV,L.SHUVALOVA,I.DUBROVSKA,J.WINSOR,L.PAPAZISI, AUTHOR 2 W.F.ANDERSON,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 3 13-SEP-23 3TX1 1 REMARK SEQADV REVDAT 2 08-NOV-17 3TX1 1 REMARK REVDAT 1 05-OCT-11 3TX1 0 JRNL AUTH E.V.FILIPPOVA,G.MINASOV,L.SHUVALOVA,I.DUBROVSKA,J.WINSOR, JRNL AUTH 2 L.PAPAZISI,W.F.ANDERSON, JRNL AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 4 (CSGID) JRNL TITL X-RAY CRYSTAL STRUCTURE OF LISTERIA MONOCYTOGENES EGD-E JRNL TITL 2 UDP-N-ACETYLENOLPYRUVYLGLUCOSAMINE REDUCTASE (MURB). JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 14082 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 750 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.69 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.76 REMARK 3 REFLECTION IN BIN (WORKING SET) : 871 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3020 REMARK 3 BIN FREE R VALUE SET COUNT : 48 REMARK 3 BIN FREE R VALUE : 0.3690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2242 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 75 REMARK 3 SOLVENT ATOMS : 54 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.12000 REMARK 3 B22 (A**2) : -0.12000 REMARK 3 B33 (A**2) : 0.19000 REMARK 3 B12 (A**2) : -0.06000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.422 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.302 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.231 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 23.201 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.924 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.884 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2358 ; 0.012 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3190 ; 2.050 ; 2.013 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 294 ; 4.024 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 92 ;32.126 ;25.761 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 419 ;16.373 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;13.810 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 372 ; 0.123 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1694 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 89 REMARK 3 ORIGIN FOR THE GROUP (A): -13.8763 46.7254 -2.3588 REMARK 3 T TENSOR REMARK 3 T11: 0.1122 T22: 0.1230 REMARK 3 T33: 0.4588 T12: -0.0317 REMARK 3 T13: 0.0962 T23: -0.1876 REMARK 3 L TENSOR REMARK 3 L11: 9.9387 L22: 1.5890 REMARK 3 L33: 0.6059 L12: 3.5156 REMARK 3 L13: -1.7247 L23: -0.3802 REMARK 3 S TENSOR REMARK 3 S11: 0.4789 S12: -0.6349 S13: 2.0391 REMARK 3 S21: 0.1873 S22: -0.1820 S23: 0.7048 REMARK 3 S31: -0.0111 S32: 0.0415 S33: -0.2969 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 90 A 166 REMARK 3 ORIGIN FOR THE GROUP (A): -13.2307 28.8097 -12.5019 REMARK 3 T TENSOR REMARK 3 T11: 0.1664 T22: 0.2470 REMARK 3 T33: 0.2091 T12: -0.0107 REMARK 3 T13: 0.0069 T23: -0.1190 REMARK 3 L TENSOR REMARK 3 L11: 4.8074 L22: 3.6328 REMARK 3 L33: 1.8061 L12: 3.3764 REMARK 3 L13: 0.1116 L23: 1.5356 REMARK 3 S TENSOR REMARK 3 S11: -0.0272 S12: 0.5263 S13: -0.8086 REMARK 3 S21: 0.0057 S22: 0.1740 S23: -0.6758 REMARK 3 S31: 0.0797 S32: -0.0976 S33: -0.1468 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 169 A 211 REMARK 3 ORIGIN FOR THE GROUP (A): -19.7891 25.2825 -13.7540 REMARK 3 T TENSOR REMARK 3 T11: 0.2652 T22: 0.1913 REMARK 3 T33: 0.1995 T12: 0.0446 REMARK 3 T13: -0.0444 T23: -0.1492 REMARK 3 L TENSOR REMARK 3 L11: 3.9894 L22: 5.5993 REMARK 3 L33: 3.0177 L12: 3.8636 REMARK 3 L13: 0.4482 L23: 2.0345 REMARK 3 S TENSOR REMARK 3 S11: 0.0638 S12: 0.3864 S13: -0.7895 REMARK 3 S21: 0.1200 S22: 0.1909 S23: -0.7473 REMARK 3 S31: 0.4497 S32: 0.0731 S33: -0.2547 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 212 A 284 REMARK 3 ORIGIN FOR THE GROUP (A): -36.7661 29.3491 4.4836 REMARK 3 T TENSOR REMARK 3 T11: 0.0827 T22: 0.1407 REMARK 3 T33: 0.1233 T12: -0.0157 REMARK 3 T13: 0.0128 T23: -0.1047 REMARK 3 L TENSOR REMARK 3 L11: 4.1017 L22: 3.4333 REMARK 3 L33: 4.4503 L12: -0.2802 REMARK 3 L13: -1.1409 L23: -1.1798 REMARK 3 S TENSOR REMARK 3 S11: 0.2594 S12: 0.0861 S13: -0.2921 REMARK 3 S21: 0.1530 S22: -0.0026 S23: 0.2561 REMARK 3 S31: 0.1020 S32: 0.0967 S33: -0.2568 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 285 A 298 REMARK 3 ORIGIN FOR THE GROUP (A): -24.5312 31.9662 3.9150 REMARK 3 T TENSOR REMARK 3 T11: 0.4090 T22: 0.6436 REMARK 3 T33: 0.1748 T12: -0.0790 REMARK 3 T13: -0.0169 T23: -0.2266 REMARK 3 L TENSOR REMARK 3 L11: 9.6336 L22: 0.7011 REMARK 3 L33: 1.9584 L12: 2.5858 REMARK 3 L13: -4.3322 L23: -1.1636 REMARK 3 S TENSOR REMARK 3 S11: 0.0823 S12: -1.2234 S13: -0.1067 REMARK 3 S21: 0.0163 S22: -0.2068 S23: -0.0601 REMARK 3 S31: 0.0549 S32: 0.5156 S33: 0.1245 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 3TX1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1000068026. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-AUG-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : BE REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14888 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.690 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 15.60 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 42.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.60 REMARK 200 R MERGE FOR SHELL (I) : 0.37000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1HSK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.2 M AMMONIUM SULFATE, 20% W/V REMARK 280 GLYCEROL, PH 8.3, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.29833 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 126.59667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 94.94750 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 158.24583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 31.64917 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 63.29833 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 126.59667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 158.24583 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 94.94750 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 31.64917 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 353 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 GLY A -14 REMARK 465 VAL A -13 REMARK 465 ASP A -12 REMARK 465 LEU A -11 REMARK 465 GLY A -10 REMARK 465 THR A -9 REMARK 465 GLU A -8 REMARK 465 ASN A -7 REMARK 465 LEU A -6 REMARK 465 TYR A -5 REMARK 465 PHE A -4 REMARK 465 GLN A -3 REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 ALA A 167 REMARK 465 ALA A 168 REMARK 465 PHE A 171 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 6 -72.28 -53.75 REMARK 500 HIS A 10 -11.59 69.53 REMARK 500 ASN A 16 51.06 38.35 REMARK 500 ILE A 68 111.82 82.92 REMARK 500 LEU A 80 36.55 -98.99 REMARK 500 ASN A 90 -127.41 57.50 REMARK 500 LYS A 177 -7.92 67.05 REMARK 500 ASN A 178 48.71 36.99 REMARK 500 CYS A 218 -158.79 -95.35 REMARK 500 PRO A 226 116.94 -34.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 299 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP05232 RELATED DB: TARGETDB DBREF 3TX1 A 1 298 UNP Q8Y776 MURB_LISMO 1 298 SEQADV 3TX1 MET A -23 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 HIS A -22 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 HIS A -21 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 HIS A -20 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 HIS A -19 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 HIS A -18 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 HIS A -17 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 SER A -16 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 SER A -15 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 GLY A -14 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 VAL A -13 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 ASP A -12 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 LEU A -11 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 GLY A -10 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 THR A -9 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 GLU A -8 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 ASN A -7 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 LEU A -6 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 TYR A -5 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 PHE A -4 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 GLN A -3 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 SER A -2 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 ASN A -1 UNP Q8Y776 EXPRESSION TAG SEQADV 3TX1 ALA A 0 UNP Q8Y776 EXPRESSION TAG SEQRES 1 A 322 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 322 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET ASN SEQRES 3 A 322 ASN LEU GLN THR LYS PHE PRO HIS ILE ALA ILE LYS LEU SEQRES 4 A 322 ASN GLU PRO LEU SER LYS TYR THR TYR THR LYS THR GLY SEQRES 5 A 322 GLY ALA ALA ASP VAL PHE VAL MET PRO LYS THR ILE GLU SEQRES 6 A 322 GLU ALA GLN GLU VAL VAL ALA TYR CYS HIS GLN ASN LYS SEQRES 7 A 322 ILE PRO LEU THR ILE LEU GLY ASN GLY SER ASN LEU ILE SEQRES 8 A 322 ILE LYS ASP GLY GLY ILE ARG GLY VAL ILE LEU HIS LEU SEQRES 9 A 322 ASP LEU LEU GLN THR ILE GLU ARG ASN ASN THR GLN ILE SEQRES 10 A 322 VAL ALA MET SER GLY ALA LYS LEU ILE ASP THR ALA LYS SEQRES 11 A 322 PHE ALA LEU ASN GLU SER LEU SER GLY LEU GLU PHE ALA SEQRES 12 A 322 CYS GLY ILE PRO GLY SER ILE GLY GLY ALA LEU HIS MET SEQRES 13 A 322 ASN ALA GLY ALA TYR GLY GLY GLU ILE SER ASP VAL LEU SEQRES 14 A 322 GLU ALA ALA THR VAL LEU THR GLN THR GLY GLU LEU LYS SEQRES 15 A 322 LYS LEU LYS ARG SER GLU LEU LYS ALA ALA TYR ARG PHE SEQRES 16 A 322 SER THR ILE ALA GLU LYS ASN TYR ILE VAL LEU ASP ALA SEQRES 17 A 322 THR PHE SER LEU ALA LEU GLU GLU LYS ASN LEU ILE GLN SEQRES 18 A 322 ALA LYS MET ASP GLU LEU THR ALA ALA ARG GLU ALA LYS SEQRES 19 A 322 GLN PRO LEU GLU TYR PRO SER CYS GLY SER VAL PHE LYS SEQRES 20 A 322 ARG PRO PRO GLY HIS PHE ALA GLY LYS LEU ILE GLN ASP SEQRES 21 A 322 SER GLY LEU GLN GLY HIS ILE ILE GLY GLY ALA GLN VAL SEQRES 22 A 322 SER LEU LYS HIS ALA GLY PHE ILE VAL ASN ILE GLY GLY SEQRES 23 A 322 ALA THR ALA THR ASP TYR MET ASN LEU ILE ALA TYR VAL SEQRES 24 A 322 GLN GLN THR VAL ARG GLU LYS PHE ASP VAL GLU LEU GLU SEQRES 25 A 322 THR GLU VAL LYS ILE ILE GLY GLU ASP LYS HET FAD A 299 53 HET GOL A 300 6 HET GOL A 301 6 HET SO4 A 302 5 HET SO4 A 303 5 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 SO4 2(O4 S 2-) FORMUL 7 HOH *54(H2 O) HELIX 1 1 ASN A 3 PHE A 8 1 6 HELIX 2 2 SER A 20 THR A 23 5 4 HELIX 3 3 THR A 39 ASN A 53 1 15 HELIX 4 4 LYS A 100 GLU A 111 1 12 HELIX 5 5 LEU A 116 CYS A 120 5 5 HELIX 6 6 SER A 125 ASN A 133 1 9 HELIX 7 7 ILE A 141 VAL A 144 1 4 HELIX 8 8 SER A 163 LEU A 165 5 3 HELIX 9 9 ALA A 175 TYR A 179 5 5 HELIX 10 10 GLU A 192 GLN A 211 1 20 HELIX 11 11 PHE A 229 SER A 237 1 9 HELIX 12 12 THR A 264 ASP A 284 1 21 SHEET 1 A 4 ALA A 12 PRO A 18 0 SHEET 2 A 4 ALA A 30 MET A 36 -1 O MET A 36 N ALA A 12 SHEET 3 A 4 ILE A 73 HIS A 79 1 O ILE A 77 N VAL A 33 SHEET 4 A 4 LEU A 57 LEU A 60 1 N THR A 58 O VAL A 76 SHEET 1 B 2 LEU A 66 ILE A 68 0 SHEET 2 B 2 LYS A 292 ILE A 294 1 O ILE A 294 N ILE A 67 SHEET 1 C 5 ILE A 86 ASN A 89 0 SHEET 2 C 5 GLN A 92 MET A 96 -1 O VAL A 94 N GLU A 87 SHEET 3 C 5 ILE A 180 SER A 187 -1 O ALA A 184 N ALA A 95 SHEET 4 C 5 LEU A 145 LEU A 151 -1 N ALA A 147 O THR A 185 SHEET 5 C 5 LEU A 157 LYS A 161 -1 O LEU A 160 N ALA A 148 SHEET 1 D 2 LEU A 113 SER A 114 0 SHEET 2 D 2 ALA A 189 LEU A 190 -1 O ALA A 189 N SER A 114 SHEET 1 E 2 GLY A 135 ALA A 136 0 SHEET 2 E 2 GLY A 139 GLU A 140 -1 O GLY A 139 N ALA A 136 SHEET 1 F 3 ILE A 243 ILE A 244 0 SHEET 2 F 3 ALA A 247 VAL A 249 -1 O ALA A 247 N ILE A 244 SHEET 3 F 3 ILE A 257 ASN A 259 -1 O VAL A 258 N GLN A 248 SITE 1 AC1 32 TYR A 24 ILE A 59 GLY A 61 ASN A 62 SITE 2 AC1 32 GLY A 63 SER A 64 ASN A 65 LEU A 66 SITE 3 AC1 32 LEU A 80 ILE A 122 PRO A 123 GLY A 124 SITE 4 AC1 32 SER A 125 GLY A 127 GLY A 128 ALA A 129 SITE 5 AC1 32 HIS A 131 MET A 132 ALA A 134 GLY A 135 SITE 6 AC1 32 ALA A 136 ARG A 170 TYR A 179 VAL A 181 SITE 7 AC1 32 ARG A 207 SER A 217 CYS A 218 GLY A 219 SITE 8 AC1 32 PHE A 256 GOL A 300 SO4 A 302 HOH A 310 SITE 1 AC2 6 ARG A 170 SER A 220 GLU A 290 FAD A 299 SITE 2 AC2 6 HOH A 311 HOH A 316 SITE 1 AC3 6 ALA A 136 TYR A 137 GLY A 138 ARG A 170 SITE 2 AC3 6 ARG A 224 HOH A 316 SITE 1 AC4 4 HIS A 131 ALA A 175 LYS A 292 FAD A 299 SITE 1 AC5 5 SER A 220 PHE A 229 ALA A 230 GLY A 231 SITE 2 AC5 5 HIS A 253 CRYST1 95.210 95.210 189.895 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010503 0.006064 0.000000 0.00000 SCALE2 0.000000 0.012128 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005266 0.00000