HEADER OXIDOREDUCTASE 28-SEP-11 3U09 TITLE CRYSTAL STRUCTURE OF 3-KETOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE TITLE 2 (FABG)(G92D) FROM VIBRIO CHOLERAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] REDUCTASE FABG; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 3-KETOACYL-ACYL CARRIER PROTEIN REDUCTASE, BETA-KETOACYL- COMPND 5 ACYL CARRIER PROTEIN REDUCTASE, BETA-KETOACYL-ACP REDUCTASE; COMPND 6 EC: 1.1.1.100; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 243277; SOURCE 4 STRAIN: O1 BIOVAR ELTOR STR. N16961; SOURCE 5 GENE: FABG, VC2021, VC_2021; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIPL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, VIBRIO CHOLERAE, 3-KETOACYL-(ACYL-CARRIER-PROTEIN) KEYWDS 3 REDUCTASE, FABG, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.HOU,M.CHRUSZCZ,H.ZHENG,M.GRABOWSKI,Z.FRATCZAK,W.F.ANDERSON,W.MINOR, AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 8 28-FEB-24 3U09 1 REMARK REVDAT 7 13-APR-22 3U09 1 AUTHOR JRNL REMARK SEQADV REVDAT 6 08-NOV-17 3U09 1 REMARK REVDAT 5 23-AUG-17 3U09 1 REMARK REVDAT 4 06-APR-16 3U09 1 JRNL REVDAT 3 25-NOV-15 3U09 1 JRNL REVDAT 2 12-NOV-14 3U09 1 AUTHOR REVDAT 1 19-OCT-11 3U09 0 JRNL AUTH J.HOU,H.ZHENG,M.CHRUSZCZ,M.D.ZIMMERMAN,I.A.SHUMILIN, JRNL AUTH 2 T.OSINSKI,M.DEMAS,S.GRIMSHAW,W.MINOR JRNL TITL DISSECTING THE STRUCTURAL ELEMENTS FOR THE ACTIVATION OF JRNL TITL 2 BETA-KETOACYL-(ACYL CARRIER PROTEIN) REDUCTASE FROM VIBRIO JRNL TITL 3 CHOLERAE. JRNL REF J.BACTERIOL. V. 198 463 2015 JRNL REFN ISSN 0021-9193 JRNL PMID 26553852 JRNL DOI 10.1128/JB.00360-15 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 42619 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.300 REMARK 3 FREE R VALUE TEST SET COUNT : 2259 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2861 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.69 REMARK 3 BIN R VALUE (WORKING SET) : 0.2300 REMARK 3 BIN FREE R VALUE SET COUNT : 140 REMARK 3 BIN FREE R VALUE : 0.2470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3613 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 50 REMARK 3 SOLVENT ATOMS : 350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.85000 REMARK 3 B22 (A**2) : -1.85000 REMARK 3 B33 (A**2) : 3.70000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.023 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.062 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.859 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3711 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2434 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5019 ; 1.308 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5973 ; 1.027 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 502 ; 5.351 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 141 ;36.569 ;24.752 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 644 ;12.391 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;16.087 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 597 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4182 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 702 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.833 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : K, H, -L REMARK 3 TWIN FRACTION : 0.167 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 248 REMARK 3 RESIDUE RANGE : B 2 B 248 REMARK 3 ORIGIN FOR THE GROUP (A): 2.6540 19.7660 -0.0990 REMARK 3 T TENSOR REMARK 3 T11: 0.1320 T22: 0.0751 REMARK 3 T33: 0.0163 T12: -0.0407 REMARK 3 T13: 0.0200 T23: -0.0211 REMARK 3 L TENSOR REMARK 3 L11: 0.7303 L22: 0.4501 REMARK 3 L33: 0.5265 L12: 0.4121 REMARK 3 L13: -0.0628 L23: -0.0521 REMARK 3 S TENSOR REMARK 3 S11: 0.0861 S12: 0.1169 S13: -0.0095 REMARK 3 S21: 0.1685 S22: -0.0368 S23: 0.0458 REMARK 3 S31: 0.0509 S32: -0.0540 S33: -0.0493 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 3U09 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1000068142. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42687 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 27.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.42000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS, 2.3M AMMONIUM SULFATE, REMARK 280 5%TACSIMATE, PH 9, VAPOR DIFFUSION REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 127.37267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 63.68633 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 127.37267 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 63.68633 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -280.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 31.78700 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 55.05670 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 347 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 VAL A 64 CG1 CG2 REMARK 470 MET A 192 CG SD CE REMARK 470 GLU A 199 CG CD OE1 OE2 REMARK 470 MET B 1 CG SD CE REMARK 470 GLU B 105 CG CD OE1 OE2 REMARK 470 LYS B 132 CE NZ REMARK 470 ARG B 176 CZ NH1 NH2 REMARK 470 MET B 192 CG SD CE REMARK 470 GLU B 199 CG CD OE1 OE2 REMARK 470 ARG B 217 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 97 148.35 -176.84 REMARK 500 LEU A 115 -59.42 -133.24 REMARK 500 ASN B 97 148.24 -175.70 REMARK 500 LEU B 115 -60.64 -131.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 249 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 250 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 251 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 252 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 249 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 250 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 251 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 252 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP90557 RELATED DB: TARGETDB DBREF 3U09 A 5 248 UNP Q9KQH7 FABG_VIBCH 1 244 DBREF 3U09 B 5 248 UNP Q9KQH7 FABG_VIBCH 1 244 SEQADV 3U09 SER A -2 UNP Q9KQH7 EXPRESSION TAG SEQADV 3U09 ASN A -1 UNP Q9KQH7 EXPRESSION TAG SEQADV 3U09 ALA A 0 UNP Q9KQH7 EXPRESSION TAG SEQADV 3U09 MET A 1 UNP Q9KQH7 EXPRESSION TAG SEQADV 3U09 SER A 2 UNP Q9KQH7 EXPRESSION TAG SEQADV 3U09 GLN A 3 UNP Q9KQH7 EXPRESSION TAG SEQADV 3U09 PHE A 4 UNP Q9KQH7 EXPRESSION TAG SEQADV 3U09 ASP A 92 UNP Q9KQH7 GLY 88 ENGINEERED MUTATION SEQADV 3U09 SER B -2 UNP Q9KQH7 EXPRESSION TAG SEQADV 3U09 ASN B -1 UNP Q9KQH7 EXPRESSION TAG SEQADV 3U09 ALA B 0 UNP Q9KQH7 EXPRESSION TAG SEQADV 3U09 MET B 1 UNP Q9KQH7 EXPRESSION TAG SEQADV 3U09 SER B 2 UNP Q9KQH7 EXPRESSION TAG SEQADV 3U09 GLN B 3 UNP Q9KQH7 EXPRESSION TAG SEQADV 3U09 PHE B 4 UNP Q9KQH7 EXPRESSION TAG SEQADV 3U09 ASP B 92 UNP Q9KQH7 GLY 88 ENGINEERED MUTATION SEQRES 1 A 251 SER ASN ALA MET SER GLN PHE MET ASN LEU GLU GLY LYS SEQRES 2 A 251 VAL ALA LEU VAL THR GLY ALA SER ARG GLY ILE GLY LYS SEQRES 3 A 251 ALA ILE ALA GLU LEU LEU ALA GLU ARG GLY ALA LYS VAL SEQRES 4 A 251 ILE GLY THR ALA THR SER GLU SER GLY ALA GLN ALA ILE SEQRES 5 A 251 SER ASP TYR LEU GLY ASP ASN GLY LYS GLY MET ALA LEU SEQRES 6 A 251 ASN VAL THR ASN PRO GLU SER ILE GLU ALA VAL LEU LYS SEQRES 7 A 251 ALA ILE THR ASP GLU PHE GLY GLY VAL ASP ILE LEU VAL SEQRES 8 A 251 ASN ASN ALA ASP ILE THR ARG ASP ASN LEU LEU MET ARG SEQRES 9 A 251 MET LYS GLU GLU GLU TRP SER ASP ILE MET GLU THR ASN SEQRES 10 A 251 LEU THR SER ILE PHE ARG LEU SER LYS ALA VAL LEU ARG SEQRES 11 A 251 GLY MET MET LYS LYS ARG GLN GLY ARG ILE ILE ASN VAL SEQRES 12 A 251 GLY SER VAL VAL GLY THR MET GLY ASN ALA GLY GLN ALA SEQRES 13 A 251 ASN TYR ALA ALA ALA LYS ALA GLY VAL ILE GLY PHE THR SEQRES 14 A 251 LYS SER MET ALA ARG GLU VAL ALA SER ARG GLY VAL THR SEQRES 15 A 251 VAL ASN THR VAL ALA PRO GLY PHE ILE GLU THR ASP MET SEQRES 16 A 251 THR LYS ALA LEU ASN ASP GLU GLN ARG THR ALA THR LEU SEQRES 17 A 251 ALA GLN VAL PRO ALA GLY ARG LEU GLY ASP PRO ARG GLU SEQRES 18 A 251 ILE ALA SER ALA VAL ALA PHE LEU ALA SER PRO GLU ALA SEQRES 19 A 251 ALA TYR ILE THR GLY GLU THR LEU HIS VAL ASN GLY GLY SEQRES 20 A 251 MET TYR MET ILE SEQRES 1 B 251 SER ASN ALA MET SER GLN PHE MET ASN LEU GLU GLY LYS SEQRES 2 B 251 VAL ALA LEU VAL THR GLY ALA SER ARG GLY ILE GLY LYS SEQRES 3 B 251 ALA ILE ALA GLU LEU LEU ALA GLU ARG GLY ALA LYS VAL SEQRES 4 B 251 ILE GLY THR ALA THR SER GLU SER GLY ALA GLN ALA ILE SEQRES 5 B 251 SER ASP TYR LEU GLY ASP ASN GLY LYS GLY MET ALA LEU SEQRES 6 B 251 ASN VAL THR ASN PRO GLU SER ILE GLU ALA VAL LEU LYS SEQRES 7 B 251 ALA ILE THR ASP GLU PHE GLY GLY VAL ASP ILE LEU VAL SEQRES 8 B 251 ASN ASN ALA ASP ILE THR ARG ASP ASN LEU LEU MET ARG SEQRES 9 B 251 MET LYS GLU GLU GLU TRP SER ASP ILE MET GLU THR ASN SEQRES 10 B 251 LEU THR SER ILE PHE ARG LEU SER LYS ALA VAL LEU ARG SEQRES 11 B 251 GLY MET MET LYS LYS ARG GLN GLY ARG ILE ILE ASN VAL SEQRES 12 B 251 GLY SER VAL VAL GLY THR MET GLY ASN ALA GLY GLN ALA SEQRES 13 B 251 ASN TYR ALA ALA ALA LYS ALA GLY VAL ILE GLY PHE THR SEQRES 14 B 251 LYS SER MET ALA ARG GLU VAL ALA SER ARG GLY VAL THR SEQRES 15 B 251 VAL ASN THR VAL ALA PRO GLY PHE ILE GLU THR ASP MET SEQRES 16 B 251 THR LYS ALA LEU ASN ASP GLU GLN ARG THR ALA THR LEU SEQRES 17 B 251 ALA GLN VAL PRO ALA GLY ARG LEU GLY ASP PRO ARG GLU SEQRES 18 B 251 ILE ALA SER ALA VAL ALA PHE LEU ALA SER PRO GLU ALA SEQRES 19 B 251 ALA TYR ILE THR GLY GLU THR LEU HIS VAL ASN GLY GLY SEQRES 20 B 251 MET TYR MET ILE HET SO4 A 249 5 HET SO4 A 250 5 HET SO4 A 251 5 HET SO4 A 252 5 HET UNX A 300 1 HET UNX A 323 1 HET UNX A 324 1 HET UNX A 325 1 HET UNX A 337 1 HET SO4 B 249 5 HET SO4 B 250 5 HET SO4 B 251 5 HET SO4 B 252 5 HET UNX B 326 1 HET UNX B 327 1 HET UNX B 328 1 HET UNX B 338 1 HET UNX B 339 1 HETNAM SO4 SULFATE ION HETNAM UNX UNKNOWN ATOM OR ION FORMUL 3 SO4 8(O4 S 2-) FORMUL 7 UNX 10(X) FORMUL 21 HOH *350(H2 O) HELIX 1 1 ARG A 19 ARG A 32 1 14 HELIX 2 2 SER A 42 GLY A 54 1 13 HELIX 3 3 ASN A 66 GLY A 82 1 17 HELIX 4 4 LEU A 98 MET A 102 5 5 HELIX 5 5 LYS A 103 LEU A 115 1 13 HELIX 6 6 LEU A 115 ARG A 133 1 19 HELIX 7 7 VAL A 143 GLY A 148 1 6 HELIX 8 8 GLN A 152 ALA A 174 1 23 HELIX 9 9 THR A 190 ALA A 195 1 6 HELIX 10 10 ASN A 197 ALA A 206 1 10 HELIX 11 11 ASP A 215 SER A 228 1 14 HELIX 12 12 PRO A 229 ALA A 232 5 4 HELIX 13 13 ARG B 19 ARG B 32 1 14 HELIX 14 14 SER B 42 GLY B 54 1 13 HELIX 15 15 ASN B 66 GLY B 82 1 17 HELIX 16 16 LEU B 98 MET B 102 5 5 HELIX 17 17 LYS B 103 LEU B 115 1 13 HELIX 18 18 LEU B 115 ARG B 133 1 19 HELIX 19 19 SER B 142 GLY B 148 1 7 HELIX 20 20 GLN B 152 ALA B 174 1 23 HELIX 21 21 THR B 190 ALA B 195 1 6 HELIX 22 22 ASN B 197 ALA B 206 1 10 HELIX 23 23 ASP B 215 SER B 228 1 14 HELIX 24 24 PRO B 229 ALA B 232 5 4 SHEET 1 A 7 GLY A 57 ALA A 61 0 SHEET 2 A 7 LYS A 35 ALA A 40 1 N GLY A 38 O MET A 60 SHEET 3 A 7 VAL A 11 VAL A 14 1 N ALA A 12 O ILE A 37 SHEET 4 A 7 ILE A 86 ASN A 89 1 O VAL A 88 N LEU A 13 SHEET 5 A 7 GLY A 135 VAL A 140 1 O ILE A 138 N LEU A 87 SHEET 6 A 7 VAL A 178 PRO A 185 1 O VAL A 183 N ASN A 139 SHEET 7 A 7 THR A 238 VAL A 241 1 O LEU A 239 N ALA A 184 SHEET 1 B 7 GLY B 57 ALA B 61 0 SHEET 2 B 7 LYS B 35 ALA B 40 1 N GLY B 38 O MET B 60 SHEET 3 B 7 VAL B 11 VAL B 14 1 N ALA B 12 O ILE B 37 SHEET 4 B 7 ILE B 86 ASN B 89 1 O VAL B 88 N LEU B 13 SHEET 5 B 7 GLY B 135 VAL B 140 1 O ILE B 138 N LEU B 87 SHEET 6 B 7 VAL B 178 PRO B 185 1 O VAL B 183 N ASN B 139 SHEET 7 B 7 THR B 238 VAL B 241 1 O LEU B 239 N THR B 182 SITE 1 AC1 5 SER A 18 ARG A 19 ALA A 40 THR A 41 SITE 2 AC1 5 HOH A 388 SITE 1 AC2 5 ARG A 19 GLY A 20 LYS A 23 HOH A 379 SITE 2 AC2 5 HOH A 385 SITE 1 AC3 4 LYS A 103 GLU A 104 GLU A 105 LYS A 123 SITE 1 AC4 5 GLY A 83 LYS A 132 HOH A 253 HOH A 327 SITE 2 AC4 5 HOH A 352 SITE 1 AC5 6 MET A 1 SER A 2 ARG A 32 MET B 1 SITE 2 AC5 6 SER B 2 ARG B 32 SITE 1 AC6 6 ARG B 19 GLY B 20 ASP B 191 HOH B 361 SITE 2 AC6 6 HOH B 377 HOH B 395 SITE 1 AC7 3 LYS B 103 GLU B 104 HOH B 388 SITE 1 AC8 6 SER B 18 ARG B 19 ALA B 40 THR B 41 SITE 2 AC8 6 HOH B 387 HOH B 417 CRYST1 63.574 63.574 191.059 90.00 90.00 120.00 P 62 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015730 0.009082 0.000000 0.00000 SCALE2 0.000000 0.018163 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005234 0.00000