data_3U6G # _entry.id 3U6G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3U6G pdb_00003u6g 10.2210/pdb3u6g/pdb RCSB RCSB068365 ? ? WWPDB D_1000068365 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 393196 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3U6G _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-10-12 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a domain of unknown function, DUF4425 (BVU_3708) from Bacteroides vulgatus ATCC 8482 at 1.35 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3U6G _cell.length_a 52.237 _cell.length_b 99.302 _cell.length_c 41.085 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3U6G _symmetry.Int_Tables_number 18 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'uncharacterized protein DUF4425' 13581.699 2 ? ? ? ? 2 water nat water 18.015 244 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GASDFQTGIHKIVIQQSGDTDSFEVSVSIGGADKGGPAKLYNDKGEYIGDSYSAQIRTAT(MSE)SCCTNGNAFF(MSE) TCAGSVSSISEAGKRLHITVIGYIDDKEVNRLEKEYITDGNTLIETFSVSTKEI ; _entity_poly.pdbx_seq_one_letter_code_can ;GASDFQTGIHKIVIQQSGDTDSFEVSVSIGGADKGGPAKLYNDKGEYIGDSYSAQIRTATMSCCTNGNAFFMTCAGSVSS ISEAGKRLHITVIGYIDDKEVNRLEKEYITDGNTLIETFSVSTKEI ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 393196 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 SER n 1 4 ASP n 1 5 PHE n 1 6 GLN n 1 7 THR n 1 8 GLY n 1 9 ILE n 1 10 HIS n 1 11 LYS n 1 12 ILE n 1 13 VAL n 1 14 ILE n 1 15 GLN n 1 16 GLN n 1 17 SER n 1 18 GLY n 1 19 ASP n 1 20 THR n 1 21 ASP n 1 22 SER n 1 23 PHE n 1 24 GLU n 1 25 VAL n 1 26 SER n 1 27 VAL n 1 28 SER n 1 29 ILE n 1 30 GLY n 1 31 GLY n 1 32 ALA n 1 33 ASP n 1 34 LYS n 1 35 GLY n 1 36 GLY n 1 37 PRO n 1 38 ALA n 1 39 LYS n 1 40 LEU n 1 41 TYR n 1 42 ASN n 1 43 ASP n 1 44 LYS n 1 45 GLY n 1 46 GLU n 1 47 TYR n 1 48 ILE n 1 49 GLY n 1 50 ASP n 1 51 SER n 1 52 TYR n 1 53 SER n 1 54 ALA n 1 55 GLN n 1 56 ILE n 1 57 ARG n 1 58 THR n 1 59 ALA n 1 60 THR n 1 61 MSE n 1 62 SER n 1 63 CYS n 1 64 CYS n 1 65 THR n 1 66 ASN n 1 67 GLY n 1 68 ASN n 1 69 ALA n 1 70 PHE n 1 71 PHE n 1 72 MSE n 1 73 THR n 1 74 CYS n 1 75 ALA n 1 76 GLY n 1 77 SER n 1 78 VAL n 1 79 SER n 1 80 SER n 1 81 ILE n 1 82 SER n 1 83 GLU n 1 84 ALA n 1 85 GLY n 1 86 LYS n 1 87 ARG n 1 88 LEU n 1 89 HIS n 1 90 ILE n 1 91 THR n 1 92 VAL n 1 93 ILE n 1 94 GLY n 1 95 TYR n 1 96 ILE n 1 97 ASP n 1 98 ASP n 1 99 LYS n 1 100 GLU n 1 101 VAL n 1 102 ASN n 1 103 ARG n 1 104 LEU n 1 105 GLU n 1 106 LYS n 1 107 GLU n 1 108 TYR n 1 109 ILE n 1 110 THR n 1 111 ASP n 1 112 GLY n 1 113 ASN n 1 114 THR n 1 115 LEU n 1 116 ILE n 1 117 GLU n 1 118 THR n 1 119 PHE n 1 120 SER n 1 121 VAL n 1 122 SER n 1 123 THR n 1 124 LYS n 1 125 GLU n 1 126 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BVU_3708 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 8482' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacteroides vulgatus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 435590 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A6L6K5_BACV8 _struct_ref.pdbx_db_accession A6L6K5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ASDFQTGIHKIVIQQSGDTDSFEVSVSIGGADKGGPAKLYNDKGEYIGDSYSAQIRTATMSCCTNGNAFFMTCAGSVSSI SEAGKRLHITVIGYIDDKEVNRLEKEYITDGNTLIETFSVSTKEI ; _struct_ref.pdbx_align_begin 30 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3U6G A 2 ? 126 ? A6L6K5 30 ? 154 ? 30 154 2 1 3U6G B 2 ? 126 ? A6L6K5 30 ? 154 ? 30 154 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3U6G GLY A 1 ? UNP A6L6K5 ? ? 'expression tag' 0 1 2 3U6G GLY B 1 ? UNP A6L6K5 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3U6G # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.96 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 37.29 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '0.1M HEPES pH 7.5, 1.4M tri-sodium citrate, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Vertical focusing mirror; double crystal Si(111) monochromator' _diffrn_detector.pdbx_collection_date 2011-07-18 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.96109 1.0 2 0.97961 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL14-1 _diffrn_source.type 'SSRL BEAMLINE BL14-1' _diffrn_source.pdbx_wavelength_list 0.96109,0.97961 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3U6G _reflns.d_resolution_high 1.35 _reflns.d_resolution_low 27.960 _reflns.number_obs 45712 _reflns.pdbx_Rmerge_I_obs 0.027 _reflns.pdbx_netI_over_sigmaI 14.430 _reflns.percent_possible_obs 93.600 _reflns.B_iso_Wilson_estimate 19.297 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.350 1.400 16877 ? 8252 0.599 1.4 ? ? ? ? ? 87.900 1 1 1.400 1.450 15868 ? 7698 0.441 1.9 ? ? ? ? ? 93.800 2 1 1.450 1.520 18852 ? 9148 0.288 2.9 ? ? ? ? ? 94.400 3 1 1.520 1.600 17803 ? 8623 0.188 4.4 ? ? ? ? ? 94.700 4 1 1.600 1.700 17919 ? 8686 0.129 6.4 ? ? ? ? ? 95.400 5 1 1.700 1.830 17790 ? 8616 0.076 10.3 ? ? ? ? ? 95.600 6 1 1.830 2.020 18352 ? 8886 0.041 17.6 ? ? ? ? ? 94.700 7 1 2.020 2.310 17614 ? 8534 0.027 26.0 ? ? ? ? ? 94.600 8 1 2.310 2.910 17890 ? 8651 0.021 32.0 ? ? ? ? ? 95.100 9 1 2.910 ? 16686 ? 8177 0.016 41.6 ? ? ? ? ? 89.700 10 1 # _refine.entry_id 3U6G _refine.ls_d_res_high 1.3500 _refine.ls_d_res_low 27.960 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 95.7500 _refine.ls_number_reflns_obs 45670 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 2. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1592 _refine.ls_R_factor_R_work 0.1567 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2067 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 2302 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 23.0605 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.2300 _refine.aniso_B[2][2] 0.0000 _refine.aniso_B[3][3] -0.2200 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9720 _refine.correlation_coeff_Fo_to_Fc_free 0.9560 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.0660 _refine.overall_SU_ML 0.0410 _refine.overall_SU_B 2.2360 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 60.600 _refine.B_iso_min 8.960 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.370 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1843 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 244 _refine_hist.number_atoms_total 2087 _refine_hist.d_res_high 1.3500 _refine_hist.d_res_low 27.960 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 2071 0.010 0.022 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1374 0.002 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2847 1.252 1.953 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 3435 0.790 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 315 6.247 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 83 29.201 25.542 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 384 12.498 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 6 13.843 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 336 0.086 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2409 0.005 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 405 0.002 0.020 ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 3444 9.591 3.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_free 140 21.947 5.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded 3490 9.116 5.000 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.3510 _refine_ls_shell.d_res_low 1.3860 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 93.7100 _refine_ls_shell.number_reflns_R_work 2907 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2410 _refine_ls_shell.R_factor_R_free 0.3030 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 160 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 3067 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3U6G _struct.title 'Crystal structure of a domain of unknown function, DUF4425 (BVU_3708) from Bacteroides vulgatus ATCC 8482 at 1.35 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;DUF4425, immunoglobulin-like fold, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, UNKNOWN FUNCTION ; _struct_keywords.pdbx_keywords 'Structural Genomics, Unknown Function' _struct_keywords.entry_id 3U6G # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details 'ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 20 ? PHE A 23 ? THR A 48 PHE A 51 5 ? 4 HELX_P HELX_P2 2 THR B 20 ? PHE B 23 ? THR B 48 PHE B 51 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A THR 60 C ? ? ? 1_555 A MSE 61 N ? ? A THR 88 A MSE 89 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale2 covale both ? A MSE 61 C ? ? ? 1_555 A SER 62 N ? ? A MSE 89 A SER 90 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale3 covale both ? A PHE 71 C ? ? ? 1_555 A MSE 72 N ? ? A PHE 99 A MSE 100 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale4 covale both ? A MSE 72 C ? ? ? 1_555 A THR 73 N ? ? A MSE 100 A THR 101 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale5 covale both ? B THR 60 C ? ? ? 1_555 B MSE 61 N ? ? B THR 88 B MSE 89 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale6 covale both ? B MSE 61 C ? ? ? 1_555 B SER 62 N ? ? B MSE 89 B SER 90 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale7 covale both ? B PHE 71 C ? ? ? 1_555 B MSE 72 N ? ? B PHE 99 B MSE 100 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale8 covale both ? B MSE 72 C ? ? ? 1_555 B THR 73 N ? ? B MSE 100 B THR 101 1_555 ? ? ? ? ? ? ? 1.325 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? C ? 4 ? D ? 4 ? E ? 3 ? F ? 4 ? G ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 47 ? GLY A 49 ? TYR A 75 GLY A 77 A 2 LEU A 40 ? TYR A 41 ? LEU A 68 TYR A 69 A 3 THR A 60 ? THR A 65 ? THR A 88 THR A 93 A 4 HIS A 10 ? GLY A 18 ? HIS A 38 GLY A 46 A 5 ARG A 87 ? ILE A 96 ? ARG A 115 ILE A 124 A 6 LYS A 99 ? ILE A 109 ? LYS A 127 ILE A 137 B 1 GLY A 36 ? PRO A 37 ? GLY A 64 PRO A 65 B 2 GLU A 24 ? ASP A 33 ? GLU A 52 ASP A 61 B 3 TYR A 52 ? GLN A 55 ? TYR A 80 GLN A 83 C 1 GLY A 36 ? PRO A 37 ? GLY A 64 PRO A 65 C 2 GLU A 24 ? ASP A 33 ? GLU A 52 ASP A 61 C 3 PHE A 71 ? SER A 80 ? PHE A 99 SER A 108 C 4 LEU A 115 ? SER A 122 ? LEU A 143 SER A 150 D 1 THR B 60 ? CYS B 64 ? THR B 88 CYS B 92 D 2 HIS B 10 ? GLY B 18 ? HIS B 38 GLY B 46 D 3 ARG B 87 ? ILE B 96 ? ARG B 115 ILE B 124 D 4 LYS B 99 ? ILE B 109 ? LYS B 127 ILE B 137 E 1 GLY B 36 ? PRO B 37 ? GLY B 64 PRO B 65 E 2 GLU B 24 ? ASP B 33 ? GLU B 52 ASP B 61 E 3 TYR B 52 ? GLN B 55 ? TYR B 80 GLN B 83 F 1 GLY B 36 ? PRO B 37 ? GLY B 64 PRO B 65 F 2 GLU B 24 ? ASP B 33 ? GLU B 52 ASP B 61 F 3 PHE B 71 ? SER B 80 ? PHE B 99 SER B 108 F 4 LEU B 115 ? THR B 123 ? LEU B 143 THR B 151 G 1 LEU B 40 ? TYR B 41 ? LEU B 68 TYR B 69 G 2 TYR B 47 ? GLY B 49 ? TYR B 75 GLY B 77 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 48 ? O ILE A 76 N LEU A 40 ? N LEU A 68 A 2 3 N TYR A 41 ? N TYR A 69 O CYS A 64 ? O CYS A 92 A 3 4 O MSE A 61 ? O MSE A 89 N ILE A 14 ? N ILE A 42 A 4 5 N SER A 17 ? N SER A 45 O HIS A 89 ? O HIS A 117 A 5 6 N GLY A 94 ? N GLY A 122 O VAL A 101 ? O VAL A 129 B 1 2 O GLY A 36 ? O GLY A 64 N ASP A 33 ? N ASP A 61 B 2 3 N ILE A 29 ? N ILE A 57 O TYR A 52 ? O TYR A 80 C 1 2 O GLY A 36 ? O GLY A 64 N ASP A 33 ? N ASP A 61 C 2 3 N GLY A 30 ? N GLY A 58 O THR A 73 ? O THR A 101 C 3 4 N SER A 80 ? N SER A 108 O LEU A 115 ? O LEU A 143 D 1 2 O MSE B 61 ? O MSE B 89 N ILE B 14 ? N ILE B 42 D 2 3 N SER B 17 ? N SER B 45 O HIS B 89 ? O HIS B 117 D 3 4 N LEU B 88 ? N LEU B 116 O TYR B 108 ? O TYR B 136 E 1 2 O GLY B 36 ? O GLY B 64 N ASP B 33 ? N ASP B 61 E 2 3 N ILE B 29 ? N ILE B 57 O TYR B 52 ? O TYR B 80 F 1 2 O GLY B 36 ? O GLY B 64 N ASP B 33 ? N ASP B 61 F 2 3 N GLY B 30 ? N GLY B 58 O THR B 73 ? O THR B 101 F 3 4 N VAL B 78 ? N VAL B 106 O GLU B 117 ? O GLU B 145 G 1 2 N LEU B 40 ? N LEU B 68 O ILE B 48 ? O ILE B 76 # _atom_sites.entry_id 3U6G _atom_sites.fract_transf_matrix[1][1] 0.019144 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010070 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024340 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 ALA 2 30 30 ALA ALA A . n A 1 3 SER 3 31 31 SER SER A . n A 1 4 ASP 4 32 32 ASP ASP A . n A 1 5 PHE 5 33 33 PHE PHE A . n A 1 6 GLN 6 34 34 GLN GLN A . n A 1 7 THR 7 35 35 THR THR A . n A 1 8 GLY 8 36 36 GLY GLY A . n A 1 9 ILE 9 37 37 ILE ILE A . n A 1 10 HIS 10 38 38 HIS HIS A . n A 1 11 LYS 11 39 39 LYS LYS A . n A 1 12 ILE 12 40 40 ILE ILE A . n A 1 13 VAL 13 41 41 VAL VAL A . n A 1 14 ILE 14 42 42 ILE ILE A . n A 1 15 GLN 15 43 43 GLN GLN A . n A 1 16 GLN 16 44 44 GLN GLN A . n A 1 17 SER 17 45 45 SER SER A . n A 1 18 GLY 18 46 46 GLY GLY A . n A 1 19 ASP 19 47 47 ASP ASP A . n A 1 20 THR 20 48 48 THR THR A . n A 1 21 ASP 21 49 49 ASP ASP A . n A 1 22 SER 22 50 50 SER SER A . n A 1 23 PHE 23 51 51 PHE PHE A . n A 1 24 GLU 24 52 52 GLU GLU A . n A 1 25 VAL 25 53 53 VAL VAL A . n A 1 26 SER 26 54 54 SER SER A . n A 1 27 VAL 27 55 55 VAL VAL A . n A 1 28 SER 28 56 56 SER SER A . n A 1 29 ILE 29 57 57 ILE ILE A . n A 1 30 GLY 30 58 58 GLY GLY A . n A 1 31 GLY 31 59 59 GLY GLY A . n A 1 32 ALA 32 60 60 ALA ALA A . n A 1 33 ASP 33 61 61 ASP ASP A . n A 1 34 LYS 34 62 62 LYS LYS A . n A 1 35 GLY 35 63 63 GLY GLY A . n A 1 36 GLY 36 64 64 GLY GLY A . n A 1 37 PRO 37 65 65 PRO PRO A . n A 1 38 ALA 38 66 66 ALA ALA A . n A 1 39 LYS 39 67 67 LYS LYS A . n A 1 40 LEU 40 68 68 LEU LEU A . n A 1 41 TYR 41 69 69 TYR TYR A . n A 1 42 ASN 42 70 70 ASN ASN A . n A 1 43 ASP 43 71 71 ASP ASP A . n A 1 44 LYS 44 72 72 LYS LYS A . n A 1 45 GLY 45 73 73 GLY GLY A . n A 1 46 GLU 46 74 74 GLU GLU A . n A 1 47 TYR 47 75 75 TYR TYR A . n A 1 48 ILE 48 76 76 ILE ILE A . n A 1 49 GLY 49 77 77 GLY GLY A . n A 1 50 ASP 50 78 78 ASP ASP A . n A 1 51 SER 51 79 79 SER SER A . n A 1 52 TYR 52 80 80 TYR TYR A . n A 1 53 SER 53 81 81 SER SER A . n A 1 54 ALA 54 82 82 ALA ALA A . n A 1 55 GLN 55 83 83 GLN GLN A . n A 1 56 ILE 56 84 84 ILE ILE A . n A 1 57 ARG 57 85 85 ARG ARG A . n A 1 58 THR 58 86 86 THR THR A . n A 1 59 ALA 59 87 87 ALA ALA A . n A 1 60 THR 60 88 88 THR THR A . n A 1 61 MSE 61 89 89 MSE MSE A . n A 1 62 SER 62 90 90 SER SER A . n A 1 63 CYS 63 91 91 CYS CYS A . n A 1 64 CYS 64 92 92 CYS CYS A . n A 1 65 THR 65 93 93 THR THR A . n A 1 66 ASN 66 94 94 ASN ASN A . n A 1 67 GLY 67 95 95 GLY GLY A . n A 1 68 ASN 68 96 96 ASN ASN A . n A 1 69 ALA 69 97 97 ALA ALA A . n A 1 70 PHE 70 98 98 PHE PHE A . n A 1 71 PHE 71 99 99 PHE PHE A . n A 1 72 MSE 72 100 100 MSE MSE A . n A 1 73 THR 73 101 101 THR THR A . n A 1 74 CYS 74 102 102 CYS CYS A . n A 1 75 ALA 75 103 103 ALA ALA A . n A 1 76 GLY 76 104 104 GLY GLY A . n A 1 77 SER 77 105 105 SER SER A . n A 1 78 VAL 78 106 106 VAL VAL A . n A 1 79 SER 79 107 107 SER SER A . n A 1 80 SER 80 108 108 SER SER A . n A 1 81 ILE 81 109 109 ILE ILE A . n A 1 82 SER 82 110 110 SER SER A . n A 1 83 GLU 83 111 111 GLU GLU A . n A 1 84 ALA 84 112 112 ALA ALA A . n A 1 85 GLY 85 113 113 GLY GLY A . n A 1 86 LYS 86 114 114 LYS LYS A . n A 1 87 ARG 87 115 115 ARG ARG A . n A 1 88 LEU 88 116 116 LEU LEU A . n A 1 89 HIS 89 117 117 HIS HIS A . n A 1 90 ILE 90 118 118 ILE ILE A . n A 1 91 THR 91 119 119 THR THR A . n A 1 92 VAL 92 120 120 VAL VAL A . n A 1 93 ILE 93 121 121 ILE ILE A . n A 1 94 GLY 94 122 122 GLY GLY A . n A 1 95 TYR 95 123 123 TYR TYR A . n A 1 96 ILE 96 124 124 ILE ILE A . n A 1 97 ASP 97 125 125 ASP ASP A . n A 1 98 ASP 98 126 126 ASP ASP A . n A 1 99 LYS 99 127 127 LYS LYS A . n A 1 100 GLU 100 128 128 GLU GLU A . n A 1 101 VAL 101 129 129 VAL VAL A . n A 1 102 ASN 102 130 130 ASN ASN A . n A 1 103 ARG 103 131 131 ARG ARG A . n A 1 104 LEU 104 132 132 LEU LEU A . n A 1 105 GLU 105 133 133 GLU GLU A . n A 1 106 LYS 106 134 134 LYS LYS A . n A 1 107 GLU 107 135 135 GLU GLU A . n A 1 108 TYR 108 136 136 TYR TYR A . n A 1 109 ILE 109 137 137 ILE ILE A . n A 1 110 THR 110 138 138 THR THR A . n A 1 111 ASP 111 139 139 ASP ASP A . n A 1 112 GLY 112 140 140 GLY GLY A . n A 1 113 ASN 113 141 141 ASN ASN A . n A 1 114 THR 114 142 142 THR THR A . n A 1 115 LEU 115 143 143 LEU LEU A . n A 1 116 ILE 116 144 144 ILE ILE A . n A 1 117 GLU 117 145 145 GLU GLU A . n A 1 118 THR 118 146 146 THR THR A . n A 1 119 PHE 119 147 147 PHE PHE A . n A 1 120 SER 120 148 148 SER SER A . n A 1 121 VAL 121 149 149 VAL VAL A . n A 1 122 SER 122 150 150 SER SER A . n A 1 123 THR 123 151 151 THR THR A . n A 1 124 LYS 124 152 152 LYS LYS A . n A 1 125 GLU 125 153 153 GLU GLU A . n A 1 126 ILE 126 154 154 ILE ILE A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 ALA 2 30 ? ? ? B . n B 1 3 SER 3 31 ? ? ? B . n B 1 4 ASP 4 32 32 ASP ASP B . n B 1 5 PHE 5 33 33 PHE PHE B . n B 1 6 GLN 6 34 34 GLN GLN B . n B 1 7 THR 7 35 35 THR THR B . n B 1 8 GLY 8 36 36 GLY GLY B . n B 1 9 ILE 9 37 37 ILE ILE B . n B 1 10 HIS 10 38 38 HIS HIS B . n B 1 11 LYS 11 39 39 LYS LYS B . n B 1 12 ILE 12 40 40 ILE ILE B . n B 1 13 VAL 13 41 41 VAL VAL B . n B 1 14 ILE 14 42 42 ILE ILE B . n B 1 15 GLN 15 43 43 GLN GLN B . n B 1 16 GLN 16 44 44 GLN GLN B . n B 1 17 SER 17 45 45 SER SER B . n B 1 18 GLY 18 46 46 GLY GLY B . n B 1 19 ASP 19 47 47 ASP ASP B . n B 1 20 THR 20 48 48 THR THR B . n B 1 21 ASP 21 49 49 ASP ASP B . n B 1 22 SER 22 50 50 SER SER B . n B 1 23 PHE 23 51 51 PHE PHE B . n B 1 24 GLU 24 52 52 GLU GLU B . n B 1 25 VAL 25 53 53 VAL VAL B . n B 1 26 SER 26 54 54 SER SER B . n B 1 27 VAL 27 55 55 VAL VAL B . n B 1 28 SER 28 56 56 SER SER B . n B 1 29 ILE 29 57 57 ILE ILE B . n B 1 30 GLY 30 58 58 GLY GLY B . n B 1 31 GLY 31 59 59 GLY GLY B . n B 1 32 ALA 32 60 60 ALA ALA B . n B 1 33 ASP 33 61 61 ASP ASP B . n B 1 34 LYS 34 62 62 LYS LYS B . n B 1 35 GLY 35 63 63 GLY GLY B . n B 1 36 GLY 36 64 64 GLY GLY B . n B 1 37 PRO 37 65 65 PRO PRO B . n B 1 38 ALA 38 66 66 ALA ALA B . n B 1 39 LYS 39 67 67 LYS LYS B . n B 1 40 LEU 40 68 68 LEU LEU B . n B 1 41 TYR 41 69 69 TYR TYR B . n B 1 42 ASN 42 70 70 ASN ASN B . n B 1 43 ASP 43 71 71 ASP ASP B . n B 1 44 LYS 44 72 72 LYS LYS B . n B 1 45 GLY 45 73 73 GLY GLY B . n B 1 46 GLU 46 74 74 GLU GLU B . n B 1 47 TYR 47 75 75 TYR TYR B . n B 1 48 ILE 48 76 76 ILE ILE B . n B 1 49 GLY 49 77 77 GLY GLY B . n B 1 50 ASP 50 78 78 ASP ASP B . n B 1 51 SER 51 79 79 SER SER B . n B 1 52 TYR 52 80 80 TYR TYR B . n B 1 53 SER 53 81 81 SER SER B . n B 1 54 ALA 54 82 82 ALA ALA B . n B 1 55 GLN 55 83 83 GLN GLN B . n B 1 56 ILE 56 84 84 ILE ILE B . n B 1 57 ARG 57 85 85 ARG ARG B . n B 1 58 THR 58 86 86 THR THR B . n B 1 59 ALA 59 87 87 ALA ALA B . n B 1 60 THR 60 88 88 THR THR B . n B 1 61 MSE 61 89 89 MSE MSE B . n B 1 62 SER 62 90 90 SER SER B . n B 1 63 CYS 63 91 91 CYS CYS B . n B 1 64 CYS 64 92 92 CYS CYS B . n B 1 65 THR 65 93 93 THR THR B . n B 1 66 ASN 66 94 94 ASN ASN B . n B 1 67 GLY 67 95 95 GLY GLY B . n B 1 68 ASN 68 96 96 ASN ASN B . n B 1 69 ALA 69 97 97 ALA ALA B . n B 1 70 PHE 70 98 98 PHE PHE B . n B 1 71 PHE 71 99 99 PHE PHE B . n B 1 72 MSE 72 100 100 MSE MSE B . n B 1 73 THR 73 101 101 THR THR B . n B 1 74 CYS 74 102 102 CYS CYS B . n B 1 75 ALA 75 103 103 ALA ALA B . n B 1 76 GLY 76 104 104 GLY GLY B . n B 1 77 SER 77 105 105 SER SER B . n B 1 78 VAL 78 106 106 VAL VAL B . n B 1 79 SER 79 107 107 SER SER B . n B 1 80 SER 80 108 108 SER SER B . n B 1 81 ILE 81 109 109 ILE ILE B . n B 1 82 SER 82 110 110 SER SER B . n B 1 83 GLU 83 111 111 GLU GLU B . n B 1 84 ALA 84 112 112 ALA ALA B . n B 1 85 GLY 85 113 113 GLY GLY B . n B 1 86 LYS 86 114 114 LYS LYS B . n B 1 87 ARG 87 115 115 ARG ARG B . n B 1 88 LEU 88 116 116 LEU LEU B . n B 1 89 HIS 89 117 117 HIS HIS B . n B 1 90 ILE 90 118 118 ILE ILE B . n B 1 91 THR 91 119 119 THR THR B . n B 1 92 VAL 92 120 120 VAL VAL B . n B 1 93 ILE 93 121 121 ILE ILE B . n B 1 94 GLY 94 122 122 GLY GLY B . n B 1 95 TYR 95 123 123 TYR TYR B . n B 1 96 ILE 96 124 124 ILE ILE B . n B 1 97 ASP 97 125 125 ASP ASP B . n B 1 98 ASP 98 126 126 ASP ASP B . n B 1 99 LYS 99 127 127 LYS LYS B . n B 1 100 GLU 100 128 128 GLU GLU B . n B 1 101 VAL 101 129 129 VAL VAL B . n B 1 102 ASN 102 130 130 ASN ASN B . n B 1 103 ARG 103 131 131 ARG ARG B . n B 1 104 LEU 104 132 132 LEU LEU B . n B 1 105 GLU 105 133 133 GLU GLU B . n B 1 106 LYS 106 134 134 LYS LYS B . n B 1 107 GLU 107 135 135 GLU GLU B . n B 1 108 TYR 108 136 136 TYR TYR B . n B 1 109 ILE 109 137 137 ILE ILE B . n B 1 110 THR 110 138 138 THR THR B . n B 1 111 ASP 111 139 139 ASP ASP B . n B 1 112 GLY 112 140 140 GLY GLY B . n B 1 113 ASN 113 141 141 ASN ASN B . n B 1 114 THR 114 142 142 THR THR B . n B 1 115 LEU 115 143 143 LEU LEU B . n B 1 116 ILE 116 144 144 ILE ILE B . n B 1 117 GLU 117 145 145 GLU GLU B . n B 1 118 THR 118 146 146 THR THR B . n B 1 119 PHE 119 147 147 PHE PHE B . n B 1 120 SER 120 148 148 SER SER B . n B 1 121 VAL 121 149 149 VAL VAL B . n B 1 122 SER 122 150 150 SER SER B . n B 1 123 THR 123 151 151 THR THR B . n B 1 124 LYS 124 152 152 LYS LYS B . n B 1 125 GLU 125 153 153 GLU GLU B . n B 1 126 ILE 126 154 154 ILE ILE B . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 157 157 HOH HOH A . C 2 HOH 2 160 160 HOH HOH A . C 2 HOH 3 164 164 HOH HOH A . C 2 HOH 4 167 167 HOH HOH A . C 2 HOH 5 170 170 HOH HOH A . C 2 HOH 6 175 175 HOH HOH A . C 2 HOH 7 178 178 HOH HOH A . C 2 HOH 8 181 181 HOH HOH A . C 2 HOH 9 184 184 HOH HOH A . C 2 HOH 10 190 190 HOH HOH A . C 2 HOH 11 194 194 HOH HOH A . C 2 HOH 12 196 196 HOH HOH A . C 2 HOH 13 198 198 HOH HOH A . C 2 HOH 14 199 199 HOH HOH A . C 2 HOH 15 201 201 HOH HOH A . C 2 HOH 16 202 202 HOH HOH A . C 2 HOH 17 203 203 HOH HOH A . C 2 HOH 18 204 204 HOH HOH A . C 2 HOH 19 206 206 HOH HOH A . C 2 HOH 20 207 207 HOH HOH A . C 2 HOH 21 209 209 HOH HOH A . C 2 HOH 22 212 212 HOH HOH A . C 2 HOH 23 213 213 HOH HOH A . C 2 HOH 24 219 219 HOH HOH A . C 2 HOH 25 224 224 HOH HOH A . C 2 HOH 26 225 225 HOH HOH A . C 2 HOH 27 228 228 HOH HOH A . C 2 HOH 28 236 236 HOH HOH A . C 2 HOH 29 237 237 HOH HOH A . C 2 HOH 30 238 238 HOH HOH A . C 2 HOH 31 240 240 HOH HOH A . C 2 HOH 32 243 243 HOH HOH A . C 2 HOH 33 244 244 HOH HOH A . C 2 HOH 34 246 246 HOH HOH A . C 2 HOH 35 247 247 HOH HOH A . C 2 HOH 36 248 248 HOH HOH A . C 2 HOH 37 253 253 HOH HOH A . C 2 HOH 38 256 256 HOH HOH A . C 2 HOH 39 259 259 HOH HOH A . C 2 HOH 40 265 265 HOH HOH A . C 2 HOH 41 266 266 HOH HOH A . C 2 HOH 42 268 268 HOH HOH A . C 2 HOH 43 271 271 HOH HOH A . C 2 HOH 44 272 272 HOH HOH A . C 2 HOH 45 273 273 HOH HOH A . C 2 HOH 46 275 275 HOH HOH A . C 2 HOH 47 279 279 HOH HOH A . C 2 HOH 48 280 280 HOH HOH A . C 2 HOH 49 281 281 HOH HOH A . C 2 HOH 50 283 283 HOH HOH A . C 2 HOH 51 284 284 HOH HOH A . C 2 HOH 52 285 285 HOH HOH A . C 2 HOH 53 288 288 HOH HOH A . C 2 HOH 54 291 291 HOH HOH A . C 2 HOH 55 294 294 HOH HOH A . C 2 HOH 56 298 298 HOH HOH A . C 2 HOH 57 299 299 HOH HOH A . C 2 HOH 58 300 300 HOH HOH A . C 2 HOH 59 301 301 HOH HOH A . C 2 HOH 60 302 302 HOH HOH A . C 2 HOH 61 303 303 HOH HOH A . C 2 HOH 62 304 304 HOH HOH A . C 2 HOH 63 305 305 HOH HOH A . C 2 HOH 64 308 308 HOH HOH A . C 2 HOH 65 311 311 HOH HOH A . C 2 HOH 66 312 312 HOH HOH A . C 2 HOH 67 314 314 HOH HOH A . C 2 HOH 68 317 317 HOH HOH A . C 2 HOH 69 319 319 HOH HOH A . C 2 HOH 70 320 320 HOH HOH A . C 2 HOH 71 322 322 HOH HOH A . C 2 HOH 72 323 323 HOH HOH A . C 2 HOH 73 324 324 HOH HOH A . C 2 HOH 74 327 327 HOH HOH A . C 2 HOH 75 329 329 HOH HOH A . C 2 HOH 76 331 331 HOH HOH A . C 2 HOH 77 333 333 HOH HOH A . C 2 HOH 78 336 336 HOH HOH A . C 2 HOH 79 337 337 HOH HOH A . C 2 HOH 80 339 339 HOH HOH A . C 2 HOH 81 340 340 HOH HOH A . C 2 HOH 82 342 342 HOH HOH A . C 2 HOH 83 343 343 HOH HOH A . C 2 HOH 84 349 349 HOH HOH A . C 2 HOH 85 350 350 HOH HOH A . C 2 HOH 86 354 354 HOH HOH A . C 2 HOH 87 355 355 HOH HOH A . C 2 HOH 88 357 357 HOH HOH A . C 2 HOH 89 363 363 HOH HOH A . C 2 HOH 90 366 366 HOH HOH A . C 2 HOH 91 368 368 HOH HOH A . C 2 HOH 92 369 369 HOH HOH A . C 2 HOH 93 370 370 HOH HOH A . C 2 HOH 94 373 373 HOH HOH A . C 2 HOH 95 376 376 HOH HOH A . C 2 HOH 96 378 378 HOH HOH A . C 2 HOH 97 379 379 HOH HOH A . C 2 HOH 98 389 389 HOH HOH A . C 2 HOH 99 390 390 HOH HOH A . C 2 HOH 100 392 392 HOH HOH A . C 2 HOH 101 393 393 HOH HOH A . D 2 HOH 1 155 155 HOH HOH B . D 2 HOH 2 156 156 HOH HOH B . D 2 HOH 3 158 158 HOH HOH B . D 2 HOH 4 159 159 HOH HOH B . D 2 HOH 5 161 161 HOH HOH B . D 2 HOH 6 162 162 HOH HOH B . D 2 HOH 7 163 163 HOH HOH B . D 2 HOH 8 165 165 HOH HOH B . D 2 HOH 9 166 166 HOH HOH B . D 2 HOH 10 168 168 HOH HOH B . D 2 HOH 11 169 169 HOH HOH B . D 2 HOH 12 171 171 HOH HOH B . D 2 HOH 13 172 172 HOH HOH B . D 2 HOH 14 173 173 HOH HOH B . D 2 HOH 15 174 174 HOH HOH B . D 2 HOH 16 176 176 HOH HOH B . D 2 HOH 17 177 177 HOH HOH B . D 2 HOH 18 179 179 HOH HOH B . D 2 HOH 19 180 180 HOH HOH B . D 2 HOH 20 182 182 HOH HOH B . D 2 HOH 21 183 183 HOH HOH B . D 2 HOH 22 185 185 HOH HOH B . D 2 HOH 23 186 186 HOH HOH B . D 2 HOH 24 187 187 HOH HOH B . D 2 HOH 25 188 188 HOH HOH B . D 2 HOH 26 189 189 HOH HOH B . D 2 HOH 27 191 191 HOH HOH B . D 2 HOH 28 192 192 HOH HOH B . D 2 HOH 29 193 193 HOH HOH B . D 2 HOH 30 195 195 HOH HOH B . D 2 HOH 31 197 197 HOH HOH B . D 2 HOH 32 200 200 HOH HOH B . D 2 HOH 33 205 205 HOH HOH B . D 2 HOH 34 208 208 HOH HOH B . D 2 HOH 35 210 210 HOH HOH B . D 2 HOH 36 211 211 HOH HOH B . D 2 HOH 37 214 214 HOH HOH B . D 2 HOH 38 215 215 HOH HOH B . D 2 HOH 39 216 216 HOH HOH B . D 2 HOH 40 217 217 HOH HOH B . D 2 HOH 41 218 218 HOH HOH B . D 2 HOH 42 220 220 HOH HOH B . D 2 HOH 43 221 221 HOH HOH B . D 2 HOH 44 222 222 HOH HOH B . D 2 HOH 45 223 223 HOH HOH B . D 2 HOH 46 226 226 HOH HOH B . D 2 HOH 47 227 227 HOH HOH B . D 2 HOH 48 229 229 HOH HOH B . D 2 HOH 49 230 230 HOH HOH B . D 2 HOH 50 231 231 HOH HOH B . D 2 HOH 51 232 232 HOH HOH B . D 2 HOH 52 233 233 HOH HOH B . D 2 HOH 53 234 234 HOH HOH B . D 2 HOH 54 235 235 HOH HOH B . D 2 HOH 55 239 239 HOH HOH B . D 2 HOH 56 241 241 HOH HOH B . D 2 HOH 57 242 242 HOH HOH B . D 2 HOH 58 245 245 HOH HOH B . D 2 HOH 59 249 249 HOH HOH B . D 2 HOH 60 250 250 HOH HOH B . D 2 HOH 61 251 251 HOH HOH B . D 2 HOH 62 252 252 HOH HOH B . D 2 HOH 63 254 254 HOH HOH B . D 2 HOH 64 255 255 HOH HOH B . D 2 HOH 65 257 257 HOH HOH B . D 2 HOH 66 258 258 HOH HOH B . D 2 HOH 67 260 260 HOH HOH B . D 2 HOH 68 261 261 HOH HOH B . D 2 HOH 69 262 262 HOH HOH B . D 2 HOH 70 263 263 HOH HOH B . D 2 HOH 71 264 264 HOH HOH B . D 2 HOH 72 267 267 HOH HOH B . D 2 HOH 73 269 269 HOH HOH B . D 2 HOH 74 270 270 HOH HOH B . D 2 HOH 75 274 274 HOH HOH B . D 2 HOH 76 276 276 HOH HOH B . D 2 HOH 77 277 277 HOH HOH B . D 2 HOH 78 278 278 HOH HOH B . D 2 HOH 79 282 282 HOH HOH B . D 2 HOH 80 286 286 HOH HOH B . D 2 HOH 81 287 287 HOH HOH B . D 2 HOH 82 289 289 HOH HOH B . D 2 HOH 83 290 290 HOH HOH B . D 2 HOH 84 292 292 HOH HOH B . D 2 HOH 85 293 293 HOH HOH B . D 2 HOH 86 295 295 HOH HOH B . D 2 HOH 87 296 296 HOH HOH B . D 2 HOH 88 297 297 HOH HOH B . D 2 HOH 89 306 306 HOH HOH B . D 2 HOH 90 307 307 HOH HOH B . D 2 HOH 91 309 309 HOH HOH B . D 2 HOH 92 310 310 HOH HOH B . D 2 HOH 93 313 313 HOH HOH B . D 2 HOH 94 315 315 HOH HOH B . D 2 HOH 95 316 316 HOH HOH B . D 2 HOH 96 318 318 HOH HOH B . D 2 HOH 97 321 321 HOH HOH B . D 2 HOH 98 325 325 HOH HOH B . D 2 HOH 99 326 326 HOH HOH B . D 2 HOH 100 328 328 HOH HOH B . D 2 HOH 101 330 330 HOH HOH B . D 2 HOH 102 332 332 HOH HOH B . D 2 HOH 103 334 334 HOH HOH B . D 2 HOH 104 335 335 HOH HOH B . D 2 HOH 105 338 338 HOH HOH B . D 2 HOH 106 341 341 HOH HOH B . D 2 HOH 107 344 344 HOH HOH B . D 2 HOH 108 345 345 HOH HOH B . D 2 HOH 109 346 346 HOH HOH B . D 2 HOH 110 347 347 HOH HOH B . D 2 HOH 111 348 348 HOH HOH B . D 2 HOH 112 351 351 HOH HOH B . D 2 HOH 113 352 352 HOH HOH B . D 2 HOH 114 353 353 HOH HOH B . D 2 HOH 115 356 356 HOH HOH B . D 2 HOH 116 358 358 HOH HOH B . D 2 HOH 117 359 359 HOH HOH B . D 2 HOH 118 360 360 HOH HOH B . D 2 HOH 119 361 361 HOH HOH B . D 2 HOH 120 362 362 HOH HOH B . D 2 HOH 121 364 364 HOH HOH B . D 2 HOH 122 365 365 HOH HOH B . D 2 HOH 123 367 367 HOH HOH B . D 2 HOH 124 371 371 HOH HOH B . D 2 HOH 125 372 372 HOH HOH B . D 2 HOH 126 374 374 HOH HOH B . D 2 HOH 127 375 375 HOH HOH B . D 2 HOH 128 377 377 HOH HOH B . D 2 HOH 129 380 380 HOH HOH B . D 2 HOH 130 381 381 HOH HOH B . D 2 HOH 131 382 382 HOH HOH B . D 2 HOH 132 383 383 HOH HOH B . D 2 HOH 133 384 384 HOH HOH B . D 2 HOH 134 385 385 HOH HOH B . D 2 HOH 135 386 386 HOH HOH B . D 2 HOH 136 387 387 HOH HOH B . D 2 HOH 137 388 388 HOH HOH B . D 2 HOH 138 391 391 HOH HOH B . D 2 HOH 139 394 394 HOH HOH B . D 2 HOH 140 395 395 HOH HOH B . D 2 HOH 141 396 396 HOH HOH B . D 2 HOH 142 397 397 HOH HOH B . D 2 HOH 143 398 398 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 61 A MSE 89 ? MET SELENOMETHIONINE 2 A MSE 72 A MSE 100 ? MET SELENOMETHIONINE 3 B MSE 61 B MSE 89 ? MET SELENOMETHIONINE 4 B MSE 72 B MSE 100 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2250 ? 1 MORE -18 ? 1 'SSA (A^2)' 11450 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 217 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-11-02 2 'Structure model' 1 1 2017-10-25 3 'Structure model' 1 2 2018-01-24 4 'Structure model' 1 3 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 2 'Structure model' 'Refinement description' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_struct_assembly_auth_evidence 2 2 'Structure model' software 3 3 'Structure model' citation_author 4 4 'Structure model' database_2 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.classification' 2 2 'Structure model' '_software.name' 3 3 'Structure model' '_citation_author.name' 4 4 'Structure model' '_database_2.pdbx_DOI' 5 4 'Structure model' '_database_2.pdbx_database_accession' 6 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 4 'Structure model' '_struct_ref_seq_dif.details' # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 XSCALE 'December 6, 2010' ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 6 REFMAC 5.6.0116 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 autoSHARP . ? ? ? ? phasing ? ? ? # _pdbx_entry_details.entry_id 3U6G _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING GLY 0 FOLOWED BY RESIDUES 30-154 FOR EACH MONOMER OF THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 126 ? ? 73.08 -2.38 2 1 ASP B 126 ? ? 57.22 14.62 3 1 ASP B 126 ? ? 54.96 17.24 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 52 ? CD ? A GLU 24 CD 2 1 Y 1 A GLU 52 ? OE1 ? A GLU 24 OE1 3 1 Y 1 A GLU 52 ? OE2 ? A GLU 24 OE2 4 1 Y 1 A ARG 115 ? CD ? A ARG 87 CD 5 1 Y 1 A ARG 115 ? NE ? A ARG 87 NE 6 1 Y 1 A ARG 115 ? CZ ? A ARG 87 CZ 7 1 Y 1 A ARG 115 ? NH1 ? A ARG 87 NH1 8 1 Y 1 A ARG 115 ? NH2 ? A ARG 87 NH2 9 1 Y 1 A GLU 153 ? CG ? A GLU 125 CG 10 1 Y 1 A GLU 153 ? CD ? A GLU 125 CD 11 1 Y 1 A GLU 153 ? OE1 ? A GLU 125 OE1 12 1 Y 1 A GLU 153 ? OE2 ? A GLU 125 OE2 13 1 Y 1 A ILE 154 ? CG1 ? A ILE 126 CG1 14 1 Y 1 A ILE 154 ? CG2 ? A ILE 126 CG2 15 1 Y 1 A ILE 154 ? CD1 ? A ILE 126 CD1 16 1 Y 1 B ASP 32 ? CG ? B ASP 4 CG 17 1 Y 1 B ASP 32 ? OD1 ? B ASP 4 OD1 18 1 Y 1 B ASP 32 ? OD2 ? B ASP 4 OD2 19 1 Y 1 B LYS 39 ? NZ ? B LYS 11 NZ 20 1 Y 1 B ASP 71 ? CG ? B ASP 43 CG 21 1 Y 1 B ASP 71 ? OD1 ? B ASP 43 OD1 22 1 Y 1 B ASP 71 ? OD2 ? B ASP 43 OD2 23 1 Y 1 B LYS 127 ? CD ? B LYS 99 CD 24 1 Y 1 B LYS 127 ? CE ? B LYS 99 CE 25 1 Y 1 B LYS 127 ? NZ ? B LYS 99 NZ 26 1 Y 1 B LYS 152 ? NZ ? B LYS 124 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 B GLY 0 ? B GLY 1 3 1 Y 1 B ALA 30 ? B ALA 2 4 1 Y 1 B SER 31 ? B SER 3 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #