HEADER REPLICATION 22-OCT-11 3UB0
TITLE CRYSTAL STRUCTURE OF THE NONSTRUCTURAL PROTEIN 7 AND 8 COMPLEX OF
TITLE 2 FELINE CORONAVIRUS
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: NON-STRUCTURAL PROTEIN 6, NSP6,;
COMPND 3 CHAIN: A, D;
COMPND 4 FRAGMENT: UNP RESIDUES 3583-3777;
COMPND 5 SYNONYM: REPLICASE POLYPROTEIN 1AB;
COMPND 6 ENGINEERED: YES;
COMPND 7 MOL_ID: 2;
COMPND 8 MOLECULE: NON-STRUCTURAL PROTEIN 7, NSP7;
COMPND 9 CHAIN: B, C, E, F;
COMPND 10 FRAGMENT: UNP RESIDUES 3500-3582;
COMPND 11 SYNONYM: REPLICASE POLYPROTEIN 1AB;
COMPND 12 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: FELINE INFECTIOUS PERITONITIS VIRUS;
SOURCE 3 ORGANISM_COMMON: FCOV;
SOURCE 4 ORGANISM_TAXID: 33734;
SOURCE 5 STRAIN: FIPV WSU-79/1146;
SOURCE 6 GENE: REP, 1A-1B;
SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 9 MOL_ID: 2;
SOURCE 10 ORGANISM_SCIENTIFIC: FELINE INFECTIOUS PERITONITIS VIRUS;
SOURCE 11 ORGANISM_COMMON: FCOV;
SOURCE 12 ORGANISM_TAXID: 33734;
SOURCE 13 STRAIN: FIPV WSU-79/1146;
SOURCE 14 GENE: REP, 1A-1B;
SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS FELINE CORONAVIRUS, NONSTRUCTURAL PROTEIN, PRIMER-INDEPENDENT RNA
KEYWDS 2 POLYMERASE, REPLICATION
EXPDTA X-RAY DIFFRACTION
AUTHOR Y.XIAO,R.HILGENFELD,Q.MA
REVDAT 4 30-OCT-24 3UB0 1 SEQADV LINK
REVDAT 3 08-NOV-17 3UB0 1 REMARK
REVDAT 2 17-OCT-12 3UB0 1 JRNL
REVDAT 1 22-FEB-12 3UB0 0
JRNL AUTH Y.XIAO,Q.MA,T.RESTLE,W.SHANG,D.I.SVERGUN,R.PONNUSAMY,
JRNL AUTH 2 G.SCZAKIEL,R.HILGENFELD
JRNL TITL NONSTRUCTURAL PROTEINS 7 AND 8 OF FELINE CORONAVIRUS FORM A
JRNL TITL 2 2:1 HETEROTRIMER THAT EXHIBITS PRIMER-INDEPENDENT RNA
JRNL TITL 3 POLYMERASE ACTIVITY.
JRNL REF J.VIROL. V. 86 4444 2012
JRNL REFN ISSN 0022-538X
JRNL PMID 22318142
JRNL DOI 10.1128/JVI.06635-11
REMARK 2
REMARK 2 RESOLUTION. 2.60 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : BUSTER 2.11.1
REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,
REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.45
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0
REMARK 3 NUMBER OF REFLECTIONS : 31155
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : THIN SHELLS
REMARK 3 R VALUE (WORKING + TEST SET) : 0.206
REMARK 3 R VALUE (WORKING SET) : 0.205
REMARK 3 FREE R VALUE : 0.227
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.720
REMARK 3 FREE R VALUE TEST SET COUNT : 1471
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 16
REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60
REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.69
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.97
REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2831
REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2478
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2831
REMARK 3 BIN R VALUE (WORKING SET) : 0.2478
REMARK 3 BIN FREE R VALUE : 0.0000
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 0.00
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 0
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 5498
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 0
REMARK 3 SOLVENT ATOMS : 77
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 73.59
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 86.30
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 9.06700
REMARK 3 B22 (A**2) : 0.24690
REMARK 3 B33 (A**2) : -9.31390
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.454
REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL
REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL
REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.422
REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL
REMARK 3
REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942
REMARK 3
REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
REMARK 3 TERM COUNT WEIGHT FUNCTION.
REMARK 3 BOND LENGTHS : 5579 ; 2.000 ; HARMONIC
REMARK 3 BOND ANGLES : 7546 ; 2.000 ; HARMONIC
REMARK 3 TORSION ANGLES : 1992 ; 2.000 ; SINUSOIDAL
REMARK 3 TRIGONAL CARBON PLANES : 151 ; 2.000 ; HARMONIC
REMARK 3 GENERAL PLANES : 775 ; 5.000 ; HARMONIC
REMARK 3 ISOTROPIC THERMAL FACTORS : 5579 ; 20.000 ; HARMONIC
REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL
REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
REMARK 3 CHIRAL IMPROPER TORSION : 761 ; 5.000 ; SEMIHARMONIC
REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL
REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL
REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
REMARK 3 IDEAL-DIST CONTACT TERM : 6220 ; 4.000 ; SEMIHARMONIC
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.010
REMARK 3 BOND ANGLES (DEGREES) : 1.29
REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.67
REMARK 3 OTHER TORSION ANGLES (DEGREES) : 21.82
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 8
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: { A|-2 - A|72 }
REMARK 3 ORIGIN FOR THE GROUP (A): 78.7439 50.9333 49.9213
REMARK 3 T TENSOR
REMARK 3 T11: 0.2306 T22: 0.3746
REMARK 3 T33: 0.2592 T12: -0.1139
REMARK 3 T13: 0.0067 T23: -0.0056
REMARK 3 L TENSOR
REMARK 3 L11: 5.3060 L22: 6.2967
REMARK 3 L33: 1.5270 L12: 4.8480
REMARK 3 L13: -2.1334 L23: -2.5868
REMARK 3 S TENSOR
REMARK 3 S11: 0.3603 S12: -0.3199 S13: -0.2810
REMARK 3 S21: 0.6981 S22: -0.3268 S23: 0.1458
REMARK 3 S31: -0.1352 S32: -0.2017 S33: -0.0335
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: { A|73 - A|192 }
REMARK 3 ORIGIN FOR THE GROUP (A): 40.9895 2.5922 34.8954
REMARK 3 T TENSOR
REMARK 3 T11: 0.1890 T22: 0.4545
REMARK 3 T33: 0.1709 T12: -0.0702
REMARK 3 T13: 0.0742 T23: 0.0978
REMARK 3 L TENSOR
REMARK 3 L11: 1.5376 L22: 4.6429
REMARK 3 L33: 1.8180 L12: 0.1430
REMARK 3 L13: 0.3591 L23: 1.5469
REMARK 3 S TENSOR
REMARK 3 S11: -0.0463 S12: 0.3895 S13: 0.0694
REMARK 3 S21: -0.3959 S22: 0.0815 S23: -0.1316
REMARK 3 S31: -0.1061 S32: 0.1028 S33: -0.0353
REMARK 3
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: { B|2 - B|83 }
REMARK 3 ORIGIN FOR THE GROUP (A): 53.4451 33.9469 46.8950
REMARK 3 T TENSOR
REMARK 3 T11: 0.1903 T22: 0.2305
REMARK 3 T33: 0.4199 T12: -0.0966
REMARK 3 T13: 0.0123 T23: 0.1471
REMARK 3 L TENSOR
REMARK 3 L11: 5.4695 L22: 4.1886
REMARK 3 L33: 1.4109 L12: 2.9297
REMARK 3 L13: -0.8685 L23: -0.1662
REMARK 3 S TENSOR
REMARK 3 S11: 0.0755 S12: 0.1693 S13: 0.3935
REMARK 3 S21: -0.0939 S22: 0.0363 S23: -0.2223
REMARK 3 S31: -0.3420 S32: -0.0109 S33: -0.1118
REMARK 3
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: { C|1 - C|81 }
REMARK 3 ORIGIN FOR THE GROUP (A): 45.2766 15.8592 39.9273
REMARK 3 T TENSOR
REMARK 3 T11: 0.0376 T22: 0.1362
REMARK 3 T33: 0.0851 T12: -0.0395
REMARK 3 T13: 0.0306 T23: 0.0704
REMARK 3 L TENSOR
REMARK 3 L11: 4.0761 L22: 4.5077
REMARK 3 L33: 4.6767 L12: 2.0840
REMARK 3 L13: 0.1493 L23: 1.3786
REMARK 3 S TENSOR
REMARK 3 S11: 0.0125 S12: 0.1221 S13: -0.0848
REMARK 3 S21: -0.1734 S22: 0.1159 S23: -0.4346
REMARK 3 S31: -0.1388 S32: 0.0536 S33: -0.1284
REMARK 3
REMARK 3 TLS GROUP : 5
REMARK 3 SELECTION: { D|-2 - D|138 }
REMARK 3 ORIGIN FOR THE GROUP (A): 77.7065 41.4159 38.1459
REMARK 3 T TENSOR
REMARK 3 T11: 0.1899 T22: 0.4288
REMARK 3 T33: 0.3971 T12: 0.0011
REMARK 3 T13: 0.0418 T23: -0.0720
REMARK 3 L TENSOR
REMARK 3 L11: 2.6491 L22: 1.8286
REMARK 3 L33: 1.7732 L12: 1.5221
REMARK 3 L13: -0.7285 L23: -0.7816
REMARK 3 S TENSOR
REMARK 3 S11: -0.1771 S12: 0.3740 S13: -0.9136
REMARK 3 S21: -0.2098 S22: 0.0587 S23: -0.4465
REMARK 3 S31: 0.2841 S32: -0.3590 S33: 0.1184
REMARK 3
REMARK 3 TLS GROUP : 6
REMARK 3 SELECTION: { D|139 - D|191 }
REMARK 3 ORIGIN FOR THE GROUP (A): 73.2861 79.4041 11.4992
REMARK 3 T TENSOR
REMARK 3 T11: 0.3358 T22: 0.9781
REMARK 3 T33: -0.2838 T12: 0.4563
REMARK 3 T13: -0.2335 T23: 0.5980
REMARK 3 L TENSOR
REMARK 3 L11: 2.1994 L22: 8.2928
REMARK 3 L33: 3.5768 L12: -1.6395
REMARK 3 L13: -0.2549 L23: 4.0632
REMARK 3 S TENSOR
REMARK 3 S11: -0.4543 S12: 1.0863 S13: 0.9580
REMARK 3 S21: -1.0965 S22: 0.9231 S23: 0.5242
REMARK 3 S31: -2.2596 S32: -1.8311 S33: -0.4688
REMARK 3
REMARK 3 TLS GROUP : 7
REMARK 3 SELECTION: { E|2 - E|82 }
REMARK 3 ORIGIN FOR THE GROUP (A): 83.6636 39.3770 31.6312
REMARK 3 T TENSOR
REMARK 3 T11: 0.3492 T22: 0.5230
REMARK 3 T33: 0.6169 T12: -0.1501
REMARK 3 T13: 0.2562 T23: -0.3768
REMARK 3 L TENSOR
REMARK 3 L11: 3.2133 L22: 5.4844
REMARK 3 L33: 4.7967 L12: 2.4062
REMARK 3 L13: -1.6033 L23: -2.6874
REMARK 3 S TENSOR
REMARK 3 S11: -0.5733 S12: 0.8579 S13: -1.3035
REMARK 3 S21: -0.7944 S22: 0.0304 S23: -0.6708
REMARK 3 S31: 0.8673 S32: 0.0286 S33: 0.5430
REMARK 3
REMARK 3 TLS GROUP : 8
REMARK 3 SELECTION: { F|1 - F|77 }
REMARK 3 ORIGIN FOR THE GROUP (A): 81.1146 57.8130 21.3022
REMARK 3 T TENSOR
REMARK 3 T11: 0.1404 T22: 0.9241
REMARK 3 T33: -0.0081 T12: -0.1019
REMARK 3 T13: -0.0293 T23: -0.0779
REMARK 3 L TENSOR
REMARK 3 L11: 8.2711 L22: 3.0960
REMARK 3 L33: 3.6952 L12: 1.3334
REMARK 3 L13: -1.1533 L23: -0.2996
REMARK 3 S TENSOR
REMARK 3 S11: -0.2819 S12: 1.7383 S13: -0.1296
REMARK 3 S21: -0.4952 S22: 0.2625 S23: -0.0105
REMARK 3 S31: -0.0923 S32: -0.7919 S33: 0.0194
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 3UB0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-OCT-11.
REMARK 100 THE DEPOSITION ID IS D_1000068528.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 08-MAR-11
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 8.7
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : BESSY
REMARK 200 BEAMLINE : 14.2
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.9809
REMARK 200 MONOCHROMATOR : SI-111 CRYSTAL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : XDS
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31155
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600
REMARK 200 RESOLUTION RANGE LOW (A) : 33.450
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -2.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8
REMARK 200 DATA REDUNDANCY : 7.230
REMARK 200 R MERGE (I) : 0.05770
REMARK 200 R SYM (I) : 0.05770
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.3800
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.70
REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0
REMARK 200 DATA REDUNDANCY IN SHELL : 7.41
REMARK 200 R MERGE FOR SHELL (I) : 0.62000
REMARK 200 R SYM FOR SHELL (I) : 0.62000
REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.330
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS
REMARK 200 SOFTWARE USED: SHELXD
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 59.11
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 2.24M (NH4)2HPO4, 2MM TCEP, 0.1M TRIS
REMARK 280 -HCL, PH 8.7, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -X,Y,-Z+1/2
REMARK 290 4555 X,-Y,-Z
REMARK 290 5555 X+1/2,Y+1/2,Z
REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2
REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2
REMARK 290 8555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.33000
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.33000
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 60.72700
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 80.15050
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 60.72700
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 80.15050
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 51.33000
REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 60.72700
REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 80.15050
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 51.33000
REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 60.72700
REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 80.15050
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 6050 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 18940 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 5580 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 19220 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 GLY A -3
REMARK 465 ALA A 74
REMARK 465 ARG A 75
REMARK 465 ALA A 76
REMARK 465 VAL A 77
REMARK 465 ASP A 78
REMARK 465 LYS A 193
REMARK 465 LEU A 194
REMARK 465 GLN A 195
REMARK 465 GLY B -3
REMARK 465 PRO B -2
REMARK 465 LEU B -1
REMARK 465 GLY B 0
REMARK 465 SER B 1
REMARK 465 GLY C -3
REMARK 465 PRO C -2
REMARK 465 LEU C -1
REMARK 465 LEU C 82
REMARK 465 GLN C 83
REMARK 465 GLY D -3
REMARK 465 THR D 192
REMARK 465 LYS D 193
REMARK 465 LEU D 194
REMARK 465 GLN D 195
REMARK 465 GLY E -3
REMARK 465 PRO E -2
REMARK 465 LEU E -1
REMARK 465 GLY E 0
REMARK 465 SER E 1
REMARK 465 GLN E 83
REMARK 465 GLY F -3
REMARK 465 PRO F -2
REMARK 465 LEU F -1
REMARK 465 ASN F 78
REMARK 465 THR F 79
REMARK 465 THR F 80
REMARK 465 ILE F 81
REMARK 465 LEU F 82
REMARK 465 GLN F 83
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 SER D 124 C - N - CA ANGL. DEV. = 17.3 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 TYR A 71 -30.35 -37.98
REMARK 500 PRO A 121 -142.83 -75.40
REMARK 500 ALA A 122 -136.40 45.69
REMARK 500 ALA A 123 9.44 48.34
REMARK 500 SER A 124 2.54 57.59
REMARK 500 GLU A 144 -115.12 69.80
REMARK 500 THR A 191 73.36 -64.54
REMARK 500 LYS C 2 30.94 -85.11
REMARK 500 PHE C 76 -60.67 -104.63
REMARK 500 ALA D 122 107.12 -32.09
REMARK 500 SER D 124 -178.34 70.76
REMARK 500 GLN D 143 74.11 -109.08
REMARK 500 GLU D 144 -72.53 57.16
REMARK 500 THR E 9 118.94 -36.97
REMARK 500 LYS F 2 59.85 -93.13
REMARK 500
REMARK 500 REMARK: NULL
DBREF 3UB0 A 1 195 UNP Q98VG9 R1AB_FIPV 3583 3777
DBREF 3UB0 B 1 83 UNP Q98VG9 R1AB_FIPV 3500 3582
DBREF 3UB0 C 1 83 UNP Q98VG9 R1AB_FIPV 3500 3582
DBREF 3UB0 D 1 195 UNP Q98VG9 R1AB_FIPV 3583 3777
DBREF 3UB0 E 1 83 UNP Q98VG9 R1AB_FIPV 3500 3582
DBREF 3UB0 F 1 83 UNP Q98VG9 R1AB_FIPV 3500 3582
SEQADV 3UB0 GLY A -3 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 PRO A -2 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 LEU A -1 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 GLY A 0 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 GLY B -3 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 PRO B -2 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 LEU B -1 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 GLY B 0 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 GLY C -3 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 PRO C -2 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 LEU C -1 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 GLY C 0 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 GLY D -3 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 PRO D -2 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 LEU D -1 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 GLY D 0 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 GLY E -3 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 PRO E -2 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 LEU E -1 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 GLY E 0 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 GLY F -3 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 PRO F -2 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 LEU F -1 UNP Q98VG9 EXPRESSION TAG
SEQADV 3UB0 GLY F 0 UNP Q98VG9 EXPRESSION TAG
SEQRES 1 A 199 GLY PRO LEU GLY SER VAL ALA SER ALA TYR ALA ALA LEU
SEQRES 2 A 199 PRO SER TRP ILE ALA TYR GLU LYS ALA ARG ALA ASP LEU
SEQRES 3 A 199 GLU GLU ALA LYS LYS ASN ASP VAL SER PRO GLN LEU LEU
SEQRES 4 A 199 LYS GLN LEU THR LYS ALA CYS ASN ILE ALA LYS SER GLU
SEQRES 5 A 199 PHE GLU ARG GLU ALA SER VAL GLN LYS LYS LEU ASP LYS
SEQRES 6 A 199 MSE ALA GLU GLN ALA ALA ALA SER MSE TYR LYS GLU ALA
SEQRES 7 A 199 ARG ALA VAL ASP ARG LYS SER LYS ILE VAL SER ALA MSE
SEQRES 8 A 199 HIS SER LEU LEU PHE GLY MSE LEU LYS LYS LEU ASP MSE
SEQRES 9 A 199 SER SER VAL ASN THR ILE ILE GLU GLN ALA ARG ASN GLY
SEQRES 10 A 199 VAL LEU PRO LEU SER ILE ILE PRO ALA ALA SER ALA THR
SEQRES 11 A 199 ARG LEU ILE VAL VAL THR PRO ASN LEU GLU VAL LEU SER
SEQRES 12 A 199 LYS VAL ARG GLN GLU ASN ASN VAL HIS TYR ALA GLY ALA
SEQRES 13 A 199 ILE TRP SER ILE VAL GLU VAL LYS ASP ALA ASN GLY ALA
SEQRES 14 A 199 GLN VAL HIS LEU LYS GLU VAL THR ALA ALA ASN GLU LEU
SEQRES 15 A 199 ASN ILE THR TRP PRO LEU SER ILE THR CYS GLU ARG THR
SEQRES 16 A 199 THR LYS LEU GLN
SEQRES 1 B 87 GLY PRO LEU GLY SER LYS LEU THR GLU MET LYS CYS THR
SEQRES 2 B 87 ASN VAL VAL LEU LEU GLY LEU LEU SER LYS MET HIS VAL
SEQRES 3 B 87 GLU SER ASN SER LYS GLU TRP ASN TYR CYS VAL GLY LEU
SEQRES 4 B 87 HIS ASN GLU ILE ASN LEU CYS ASP ASP PRO ASP ALA VAL
SEQRES 5 B 87 LEU GLU LYS LEU LEU ALA LEU ILE ALA PHE PHE LEU SER
SEQRES 6 B 87 LYS HIS ASN THR CYS ASP LEU SER ASP LEU ILE GLU SER
SEQRES 7 B 87 TYR PHE GLU ASN THR THR ILE LEU GLN
SEQRES 1 C 87 GLY PRO LEU GLY SER LYS LEU THR GLU MET LYS CYS THR
SEQRES 2 C 87 ASN VAL VAL LEU LEU GLY LEU LEU SER LYS MET HIS VAL
SEQRES 3 C 87 GLU SER ASN SER LYS GLU TRP ASN TYR CYS VAL GLY LEU
SEQRES 4 C 87 HIS ASN GLU ILE ASN LEU CYS ASP ASP PRO ASP ALA VAL
SEQRES 5 C 87 LEU GLU LYS LEU LEU ALA LEU ILE ALA PHE PHE LEU SER
SEQRES 6 C 87 LYS HIS ASN THR CYS ASP LEU SER ASP LEU ILE GLU SER
SEQRES 7 C 87 TYR PHE GLU ASN THR THR ILE LEU GLN
SEQRES 1 D 199 GLY PRO LEU GLY SER VAL ALA SER ALA TYR ALA ALA LEU
SEQRES 2 D 199 PRO SER TRP ILE ALA TYR GLU LYS ALA ARG ALA ASP LEU
SEQRES 3 D 199 GLU GLU ALA LYS LYS ASN ASP VAL SER PRO GLN LEU LEU
SEQRES 4 D 199 LYS GLN LEU THR LYS ALA CYS ASN ILE ALA LYS SER GLU
SEQRES 5 D 199 PHE GLU ARG GLU ALA SER VAL GLN LYS LYS LEU ASP LYS
SEQRES 6 D 199 MSE ALA GLU GLN ALA ALA ALA SER MSE TYR LYS GLU ALA
SEQRES 7 D 199 ARG ALA VAL ASP ARG LYS SER LYS ILE VAL SER ALA MSE
SEQRES 8 D 199 HIS SER LEU LEU PHE GLY MSE LEU LYS LYS LEU ASP MSE
SEQRES 9 D 199 SER SER VAL ASN THR ILE ILE GLU GLN ALA ARG ASN GLY
SEQRES 10 D 199 VAL LEU PRO LEU SER ILE ILE PRO ALA ALA SER ALA THR
SEQRES 11 D 199 ARG LEU ILE VAL VAL THR PRO ASN LEU GLU VAL LEU SER
SEQRES 12 D 199 LYS VAL ARG GLN GLU ASN ASN VAL HIS TYR ALA GLY ALA
SEQRES 13 D 199 ILE TRP SER ILE VAL GLU VAL LYS ASP ALA ASN GLY ALA
SEQRES 14 D 199 GLN VAL HIS LEU LYS GLU VAL THR ALA ALA ASN GLU LEU
SEQRES 15 D 199 ASN ILE THR TRP PRO LEU SER ILE THR CYS GLU ARG THR
SEQRES 16 D 199 THR LYS LEU GLN
SEQRES 1 E 87 GLY PRO LEU GLY SER LYS LEU THR GLU MET LYS CYS THR
SEQRES 2 E 87 ASN VAL VAL LEU LEU GLY LEU LEU SER LYS MET HIS VAL
SEQRES 3 E 87 GLU SER ASN SER LYS GLU TRP ASN TYR CYS VAL GLY LEU
SEQRES 4 E 87 HIS ASN GLU ILE ASN LEU CYS ASP ASP PRO ASP ALA VAL
SEQRES 5 E 87 LEU GLU LYS LEU LEU ALA LEU ILE ALA PHE PHE LEU SER
SEQRES 6 E 87 LYS HIS ASN THR CYS ASP LEU SER ASP LEU ILE GLU SER
SEQRES 7 E 87 TYR PHE GLU ASN THR THR ILE LEU GLN
SEQRES 1 F 87 GLY PRO LEU GLY SER LYS LEU THR GLU MET LYS CYS THR
SEQRES 2 F 87 ASN VAL VAL LEU LEU GLY LEU LEU SER LYS MET HIS VAL
SEQRES 3 F 87 GLU SER ASN SER LYS GLU TRP ASN TYR CYS VAL GLY LEU
SEQRES 4 F 87 HIS ASN GLU ILE ASN LEU CYS ASP ASP PRO ASP ALA VAL
SEQRES 5 F 87 LEU GLU LYS LEU LEU ALA LEU ILE ALA PHE PHE LEU SER
SEQRES 6 F 87 LYS HIS ASN THR CYS ASP LEU SER ASP LEU ILE GLU SER
SEQRES 7 F 87 TYR PHE GLU ASN THR THR ILE LEU GLN
MODRES 3UB0 MSE A 62 MET SELENOMETHIONINE
MODRES 3UB0 MSE A 70 MET SELENOMETHIONINE
MODRES 3UB0 MSE A 87 MET SELENOMETHIONINE
MODRES 3UB0 MSE A 94 MET SELENOMETHIONINE
MODRES 3UB0 MSE A 100 MET SELENOMETHIONINE
MODRES 3UB0 MSE D 62 MET SELENOMETHIONINE
MODRES 3UB0 MSE D 70 MET SELENOMETHIONINE
MODRES 3UB0 MSE D 87 MET SELENOMETHIONINE
MODRES 3UB0 MSE D 94 MET SELENOMETHIONINE
MODRES 3UB0 MSE D 100 MET SELENOMETHIONINE
HET MSE A 62 8
HET MSE A 70 8
HET MSE A 87 8
HET MSE A 94 8
HET MSE A 100 8
HET MSE D 62 8
HET MSE D 70 8
HET MSE D 87 8
HET MSE D 94 8
HET MSE D 100 8
HETNAM MSE SELENOMETHIONINE
FORMUL 1 MSE 10(C5 H11 N O2 SE)
FORMUL 7 HOH *77(H2 O)
HELIX 1 1 SER A 4 ASN A 28 1 25
HELIX 2 2 SER A 31 TYR A 71 1 41
HELIX 3 3 LYS A 80 ASP A 99 1 20
HELIX 4 4 MSE A 100 ASN A 112 1 13
HELIX 5 5 ASN A 134 VAL A 141 1 8
HELIX 6 6 HIS A 168 VAL A 172 5 5
HELIX 7 7 THR A 173 ILE A 180 5 8
HELIX 8 8 ASN B 10 MET B 20 1 11
HELIX 9 9 HIS B 21 SER B 24 5 4
HELIX 10 10 ASN B 25 CYS B 42 1 18
HELIX 11 11 ASP B 44 HIS B 63 1 20
HELIX 12 12 LEU B 68 THR B 79 1 12
HELIX 13 13 THR B 80 GLN B 83 5 4
HELIX 14 14 LYS C 2 MET C 20 1 19
HELIX 15 15 HIS C 21 SER C 24 5 4
HELIX 16 16 ASN C 25 CYS C 42 1 18
HELIX 17 17 ASP C 44 LYS C 62 1 19
HELIX 18 18 ASN C 64 PHE C 76 1 13
HELIX 19 19 SER D 4 ASP D 29 1 26
HELIX 20 20 SER D 31 SER D 69 1 39
HELIX 21 21 SER D 69 VAL D 77 1 9
HELIX 22 22 ARG D 79 ASP D 99 1 21
HELIX 23 23 MSE D 100 ASN D 112 1 13
HELIX 24 24 ASN D 134 VAL D 141 1 8
HELIX 25 25 THR D 173 ILE D 180 5 8
HELIX 26 26 ASN E 10 MET E 20 1 11
HELIX 27 27 HIS E 21 SER E 24 5 4
HELIX 28 28 ASN E 25 CYS E 42 1 18
HELIX 29 29 ASP E 44 HIS E 63 1 20
HELIX 30 30 LEU E 68 THR E 79 1 12
HELIX 31 31 LYS F 2 MET F 20 1 19
HELIX 32 32 HIS F 21 SER F 24 5 4
HELIX 33 33 ASN F 25 CYS F 42 1 18
HELIX 34 34 ASP F 44 LYS F 62 1 19
HELIX 35 35 ASN F 64 PHE F 76 1 13
SHEET 1 A 6 LEU A 115 ILE A 120 0
SHEET 2 A 6 ARG A 127 THR A 132 -1 O ILE A 129 N LEU A 117
SHEET 3 A 6 LEU A 184 ARG A 190 -1 O ILE A 186 N VAL A 130
SHEET 4 A 6 ALA A 152 LYS A 160 -1 N VAL A 157 O THR A 187
SHEET 5 A 6 ASN A 146 TYR A 149 -1 N VAL A 147 O TRP A 154
SHEET 6 A 6 ARG A 142 GLN A 143 -1 N GLN A 143 O ASN A 146
SHEET 1 B 6 LEU D 115 ILE D 120 0
SHEET 2 B 6 ARG D 127 THR D 132 -1 O ILE D 129 N LEU D 117
SHEET 3 B 6 LEU D 184 ARG D 190 -1 O CYS D 188 N LEU D 128
SHEET 4 B 6 ALA D 152 LYS D 160 -1 N VAL D 157 O THR D 187
SHEET 5 B 6 ASN D 146 TYR D 149 -1 N VAL D 147 O TRP D 154
SHEET 6 B 6 ARG D 142 GLN D 143 -1 N GLN D 143 O ASN D 146
LINK C LYS A 61 N MSE A 62 1555 1555 1.33
LINK C MSE A 62 N ALA A 63 1555 1555 1.34
LINK C SER A 69 N MSE A 70 1555 1555 1.36
LINK C MSE A 70 N TYR A 71 1555 1555 1.35
LINK C ALA A 86 N MSE A 87 1555 1555 1.35
LINK C MSE A 87 N HIS A 88 1555 1555 1.36
LINK C GLY A 93 N MSE A 94 1555 1555 1.35
LINK C MSE A 94 N LEU A 95 1555 1555 1.34
LINK C ASP A 99 N MSE A 100 1555 1555 1.34
LINK C MSE A 100 N SER A 101 1555 1555 1.33
LINK C LYS D 61 N MSE D 62 1555 1555 1.33
LINK C MSE D 62 N ALA D 63 1555 1555 1.35
LINK C SER D 69 N MSE D 70 1555 1555 1.34
LINK C MSE D 70 N TYR D 71 1555 1555 1.36
LINK C ALA D 86 N MSE D 87 1555 1555 1.35
LINK C MSE D 87 N HIS D 88 1555 1555 1.36
LINK C GLY D 93 N MSE D 94 1555 1555 1.35
LINK C MSE D 94 N LEU D 95 1555 1555 1.34
LINK C ASP D 99 N MSE D 100 1555 1555 1.34
LINK C MSE D 100 N SER D 101 1555 1555 1.33
CISPEP 1 TRP A 182 PRO A 183 0 -0.70
CISPEP 2 ALA D 123 SER D 124 0 -4.28
CISPEP 3 TRP D 182 PRO D 183 0 -0.40
CRYST1 121.454 160.301 102.660 90.00 90.00 90.00 C 2 2 21 32
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.008234 0.000000 0.000000 0.00000
SCALE2 0.000000 0.006238 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009741 0.00000