HEADER TRANSFERASE 26-OCT-11 3UCA TITLE CRYSTAL STRUCTURE OF ISOPRENOID SYNTHASE (TARGET EFI-501974) FROM TITLE 2 CLOSTRIDIUM PERFRINGENS COMPND MOL_ID: 1; COMPND 2 MOLECULE: GERANYLTRANSTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM PERFRINGENS; SOURCE 3 ORGANISM_TAXID: 1502; SOURCE 4 GENE: CPE1820; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS ISOPRENOID SYNTHESIS, ISOPRENOID DIPHOSPHATE SYNTHASE, TRANSFERASE, KEYWDS 2 STRUCTURAL GENOMICS EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,R.TORO,R.BHOSLE,B.HILLERICH,R.D.SEIDEL,E.WASHINGTON, AUTHOR 2 A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,J.HAMMONDS,W.D.ZENCHECK,H.J.IMKER, AUTHOR 3 C.D.POULTER,J.A.GERLT,S.C.ALMO,ENZYME FUNCTION INITIATIVE (EFI) REVDAT 7 13-SEP-23 3UCA 1 SEQADV REVDAT 6 24-JAN-18 3UCA 1 AUTHOR REVDAT 5 10-APR-13 3UCA 1 JRNL REVDAT 4 27-MAR-13 3UCA 1 JRNL REVDAT 3 13-MAR-13 3UCA 1 JRNL REVDAT 2 22-FEB-12 3UCA 1 REVDAT 1 16-NOV-11 3UCA 0 JRNL AUTH F.H.WALLRAPP,J.J.PAN,G.RAMAMOORTHY,D.E.ALMONACID, JRNL AUTH 2 B.S.HILLERICH,R.SEIDEL,Y.PATSKOVSKY,P.C.BABBITT,S.C.ALMO, JRNL AUTH 3 M.P.JACOBSON,C.D.POULTER JRNL TITL PREDICTION OF FUNCTION FOR THE POLYPRENYL TRANSFERASE JRNL TITL 2 SUBGROUP IN THE ISOPRENOID SYNTHASE SUPERFAMILY. JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 E1196 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 23493556 JRNL DOI 10.1073/PNAS.1300632110 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 43574 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1402 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3150 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2950 REMARK 3 BIN FREE R VALUE SET COUNT : 104 REMARK 3 BIN FREE R VALUE : 0.3190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4240 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 213 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.59 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.38000 REMARK 3 B22 (A**2) : -0.38000 REMARK 3 B33 (A**2) : 0.57000 REMARK 3 B12 (A**2) : -0.19000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.149 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.112 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.042 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4336 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5830 ; 1.109 ; 1.998 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 554 ; 4.468 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 177 ;30.340 ;26.045 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 879 ;16.217 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;12.332 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 674 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3108 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2709 ; 3.584 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4357 ; 5.325 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1627 ; 7.746 ; 4.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1465 ;11.339 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3UCA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-OCT-11. REMARK 100 THE DEPOSITION ID IS D_1000068573. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45199 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.13200 REMARK 200 FOR THE DATA SET : 5.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3KRF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS, 0.2M SODIUM CHLORIDE, REMARK 280 PH 5.5, 25% PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 294 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.04533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 152.09067 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 152.09067 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 76.04533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 SER A -15 REMARK 465 SER A -14 REMARK 465 GLY A -13 REMARK 465 VAL A -12 REMARK 465 ASP A -11 REMARK 465 LEU A -10 REMARK 465 GLY A -9 REMARK 465 THR A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 SER A -1 REMARK 465 MET A 0 REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 LYS A 3 REMARK 465 ARG A 4 REMARK 465 LYS A 5 REMARK 465 THR A 6 REMARK 465 LEU A 7 REMARK 465 GLU A 8 REMARK 465 ASP A 9 REMARK 465 THR A 10 REMARK 465 ASN A 236 REMARK 465 ALA A 237 REMARK 465 LYS A 238 REMARK 465 ASP A 239 REMARK 465 LEU A 240 REMARK 465 GLY A 241 REMARK 465 LYS A 242 REMARK 465 ASN A 243 REMARK 465 VAL A 244 REMARK 465 HIS A 245 REMARK 465 LYS A 246 REMARK 465 ASP A 247 REMARK 465 GLN A 248 REMARK 465 GLU A 249 REMARK 465 SER A 250 REMARK 465 ASN A 251 REMARK 465 LYS A 252 REMARK 465 MET B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 SER B -15 REMARK 465 SER B -14 REMARK 465 GLY B -13 REMARK 465 VAL B -12 REMARK 465 ASP B -11 REMARK 465 LEU B -10 REMARK 465 GLY B -9 REMARK 465 THR B -8 REMARK 465 GLU B -7 REMARK 465 ASN B -6 REMARK 465 LEU B -5 REMARK 465 TYR B -4 REMARK 465 PHE B -3 REMARK 465 GLN B -2 REMARK 465 SER B -1 REMARK 465 MET B 0 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 LYS B 3 REMARK 465 ARG B 4 REMARK 465 LYS B 5 REMARK 465 THR B 6 REMARK 465 LEU B 7 REMARK 465 GLU B 8 REMARK 465 ASP B 9 REMARK 465 THR B 10 REMARK 465 LYS B 172 REMARK 465 GLU B 173 REMARK 465 GLU B 174 REMARK 465 ILE B 175 REMARK 465 GLY B 235 REMARK 465 ASN B 236 REMARK 465 ALA B 237 REMARK 465 LYS B 238 REMARK 465 ASP B 239 REMARK 465 LEU B 240 REMARK 465 GLY B 241 REMARK 465 LYS B 242 REMARK 465 ASN B 243 REMARK 465 VAL B 244 REMARK 465 HIS B 245 REMARK 465 LYS B 246 REMARK 465 ASP B 247 REMARK 465 GLN B 248 REMARK 465 GLU B 249 REMARK 465 SER B 250 REMARK 465 ASN B 251 REMARK 465 LYS B 252 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU B 180 CG CD1 CD2 REMARK 470 LYS B 211 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 96 -104.82 -118.82 REMARK 500 ASP B 69 55.76 -90.08 REMARK 500 MET B 96 -113.64 -115.30 REMARK 500 THR B 188 -50.45 -126.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-501974 RELATED DB: TARGETTRACK DBREF 3UCA A 1 301 UNP Q8XJE0 Q8XJE0_CLOPE 1 301 DBREF 3UCA B 1 301 UNP Q8XJE0 Q8XJE0_CLOPE 1 301 SEQADV 3UCA MET A -22 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA HIS A -21 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA HIS A -20 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA HIS A -19 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA HIS A -18 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA HIS A -17 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA HIS A -16 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA SER A -15 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA SER A -14 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA GLY A -13 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA VAL A -12 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA ASP A -11 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA LEU A -10 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA GLY A -9 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA THR A -8 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA GLU A -7 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA ASN A -6 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA LEU A -5 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA TYR A -4 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA PHE A -3 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA GLN A -2 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA SER A -1 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA MET A 0 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA MET B -22 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA HIS B -21 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA HIS B -20 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA HIS B -19 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA HIS B -18 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA HIS B -17 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA HIS B -16 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA SER B -15 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA SER B -14 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA GLY B -13 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA VAL B -12 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA ASP B -11 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA LEU B -10 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA GLY B -9 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA THR B -8 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA GLU B -7 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA ASN B -6 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA LEU B -5 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA TYR B -4 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA PHE B -3 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA GLN B -2 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA SER B -1 UNP Q8XJE0 EXPRESSION TAG SEQADV 3UCA MET B 0 UNP Q8XJE0 EXPRESSION TAG SEQRES 1 A 324 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 324 GLY THR GLU ASN LEU TYR PHE GLN SER MET MET LYS LYS SEQRES 3 A 324 ARG LYS THR LEU GLU ASP THR ALA MET ASN ILE ASN SER SEQRES 4 A 324 LEU LYS GLU GLU VAL ASP GLN SER LEU LYS ALA TYR PHE SEQRES 5 A 324 ASN LYS ASP ARG GLU TYR ASN LYS VAL LEU TYR ASP SER SEQRES 6 A 324 MET ALA TYR SER ILE ASN VAL GLY GLY LYS ARG ILE ARG SEQRES 7 A 324 PRO ILE LEU MET LEU LEU SER TYR TYR ILE TYR LYS SER SEQRES 8 A 324 ASP TYR LYS LYS ILE LEU THR PRO ALA MET ALA ILE GLU SEQRES 9 A 324 MET ILE HIS THR TYR SER LEU ILE HIS ASP ASP LEU PRO SEQRES 10 A 324 CYS MET ASP ASN ASP ASP LEU ARG ARG GLY LYS PRO THR SEQRES 11 A 324 ASN HIS LYS VAL PHE GLY GLU ALA ILE ALA VAL LEU ALA SEQRES 12 A 324 GLY ASP ALA LEU LEU ASN GLU ALA MET LYS ILE LEU VAL SEQRES 13 A 324 ASP TYR SER LEU GLU GLU GLY LYS SER ALA LEU LYS ALA SEQRES 14 A 324 THR LYS ILE ILE ALA ASP ALA ALA GLY SER ASP GLY MET SEQRES 15 A 324 ILE GLY GLY GLN ILE VAL ASP ILE ILE ASN GLU ASP LYS SEQRES 16 A 324 GLU GLU ILE SER LEU LYS GLU LEU ASP TYR MET HIS LEU SEQRES 17 A 324 LYS LYS THR GLY GLU LEU ILE LYS ALA SER ILE MET SER SEQRES 18 A 324 GLY ALA VAL LEU ALA GLU ALA SER GLU GLY ASP ILE LYS SEQRES 19 A 324 LYS LEU GLU GLY PHE GLY TYR LYS LEU GLY LEU ALA PHE SEQRES 20 A 324 GLN ILE LYS ASP ASP ILE LEU ASP VAL VAL GLY ASN ALA SEQRES 21 A 324 LYS ASP LEU GLY LYS ASN VAL HIS LYS ASP GLN GLU SER SEQRES 22 A 324 ASN LYS ASN ASN TYR ILE THR ILE PHE GLY LEU GLU GLU SEQRES 23 A 324 CYS LYS LYS LYS CYS VAL ASN ILE THR GLU GLU CYS ILE SEQRES 24 A 324 GLU ILE LEU SER SER ILE LYS GLY ASN THR GLU PRO LEU SEQRES 25 A 324 LYS VAL LEU THR MET LYS LEU LEU GLU ARG LYS PHE SEQRES 1 B 324 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 324 GLY THR GLU ASN LEU TYR PHE GLN SER MET MET LYS LYS SEQRES 3 B 324 ARG LYS THR LEU GLU ASP THR ALA MET ASN ILE ASN SER SEQRES 4 B 324 LEU LYS GLU GLU VAL ASP GLN SER LEU LYS ALA TYR PHE SEQRES 5 B 324 ASN LYS ASP ARG GLU TYR ASN LYS VAL LEU TYR ASP SER SEQRES 6 B 324 MET ALA TYR SER ILE ASN VAL GLY GLY LYS ARG ILE ARG SEQRES 7 B 324 PRO ILE LEU MET LEU LEU SER TYR TYR ILE TYR LYS SER SEQRES 8 B 324 ASP TYR LYS LYS ILE LEU THR PRO ALA MET ALA ILE GLU SEQRES 9 B 324 MET ILE HIS THR TYR SER LEU ILE HIS ASP ASP LEU PRO SEQRES 10 B 324 CYS MET ASP ASN ASP ASP LEU ARG ARG GLY LYS PRO THR SEQRES 11 B 324 ASN HIS LYS VAL PHE GLY GLU ALA ILE ALA VAL LEU ALA SEQRES 12 B 324 GLY ASP ALA LEU LEU ASN GLU ALA MET LYS ILE LEU VAL SEQRES 13 B 324 ASP TYR SER LEU GLU GLU GLY LYS SER ALA LEU LYS ALA SEQRES 14 B 324 THR LYS ILE ILE ALA ASP ALA ALA GLY SER ASP GLY MET SEQRES 15 B 324 ILE GLY GLY GLN ILE VAL ASP ILE ILE ASN GLU ASP LYS SEQRES 16 B 324 GLU GLU ILE SER LEU LYS GLU LEU ASP TYR MET HIS LEU SEQRES 17 B 324 LYS LYS THR GLY GLU LEU ILE LYS ALA SER ILE MET SER SEQRES 18 B 324 GLY ALA VAL LEU ALA GLU ALA SER GLU GLY ASP ILE LYS SEQRES 19 B 324 LYS LEU GLU GLY PHE GLY TYR LYS LEU GLY LEU ALA PHE SEQRES 20 B 324 GLN ILE LYS ASP ASP ILE LEU ASP VAL VAL GLY ASN ALA SEQRES 21 B 324 LYS ASP LEU GLY LYS ASN VAL HIS LYS ASP GLN GLU SER SEQRES 22 B 324 ASN LYS ASN ASN TYR ILE THR ILE PHE GLY LEU GLU GLU SEQRES 23 B 324 CYS LYS LYS LYS CYS VAL ASN ILE THR GLU GLU CYS ILE SEQRES 24 B 324 GLU ILE LEU SER SER ILE LYS GLY ASN THR GLU PRO LEU SEQRES 25 B 324 LYS VAL LEU THR MET LYS LEU LEU GLU ARG LYS PHE FORMUL 3 HOH *213(H2 O) HELIX 1 1 ASN A 13 ASN A 30 1 18 HELIX 2 2 ASN A 36 GLY A 50 1 15 HELIX 3 3 ARG A 53 ILE A 65 1 13 HELIX 4 4 ASP A 69 LYS A 72 5 4 HELIX 5 5 ILE A 73 ASP A 92 1 20 HELIX 6 6 THR A 107 GLY A 113 1 7 HELIX 7 7 GLY A 113 GLY A 140 1 28 HELIX 8 8 GLY A 140 GLY A 155 1 16 HELIX 9 9 GLY A 158 ASN A 169 1 12 HELIX 10 10 SER A 176 THR A 188 1 13 HELIX 11 11 THR A 188 ALA A 203 1 16 HELIX 12 12 SER A 206 VAL A 234 1 29 HELIX 13 13 ASN A 254 GLY A 260 1 7 HELIX 14 14 GLY A 260 SER A 281 1 22 HELIX 15 15 THR A 286 ARG A 299 1 14 HELIX 16 16 ASN B 13 PHE B 29 1 17 HELIX 17 17 ASN B 36 VAL B 49 1 14 HELIX 18 18 ARG B 53 ILE B 65 1 13 HELIX 19 19 ASP B 69 LYS B 72 5 4 HELIX 20 20 ILE B 73 ASP B 92 1 20 HELIX 21 21 THR B 107 GLY B 113 1 7 HELIX 22 22 GLY B 113 GLY B 140 1 28 HELIX 23 23 GLY B 140 GLY B 155 1 16 HELIX 24 24 GLY B 158 ASN B 169 1 12 HELIX 25 25 LEU B 177 THR B 188 1 12 HELIX 26 26 THR B 188 ALA B 203 1 16 HELIX 27 27 SER B 206 VAL B 234 1 29 HELIX 28 28 ASN B 254 GLY B 260 1 7 HELIX 29 29 GLY B 260 SER B 281 1 22 HELIX 30 30 THR B 286 ARG B 299 1 14 SHEET 1 A 2 LEU A 101 ARG A 102 0 SHEET 2 A 2 LYS A 105 PRO A 106 -1 O LYS A 105 N ARG A 102 SHEET 1 B 2 LEU B 101 ARG B 102 0 SHEET 2 B 2 LYS B 105 PRO B 106 -1 O LYS B 105 N ARG B 102 CRYST1 70.117 70.117 228.136 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014262 0.008234 0.000000 0.00000 SCALE2 0.000000 0.016468 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004383 0.00000