data_3UD3
# 
_entry.id   3UD3 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.387 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   3UD3         pdb_00003ud3 10.2210/pdb3ud3/pdb 
NDB   NA1367       ?            ?                   
RCSB  RCSB068602   ?            ?                   
WWPDB D_1000068602 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2012-01-04 
2 'Structure model' 1 1 2012-10-17 
3 'Structure model' 1 2 2024-02-28 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Database references'  
2 3 'Structure model' 'Data collection'      
3 3 'Structure model' 'Database references'  
4 3 'Structure model' 'Derived calculations' 
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 3 'Structure model' chem_comp_atom         
2 3 'Structure model' chem_comp_bond         
3 3 'Structure model' database_2             
4 3 'Structure model' pdbx_struct_conn_angle 
5 3 'Structure model' struct_conn            
6 3 'Structure model' struct_ref_seq_dif     
7 3 'Structure model' struct_site            
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  3 'Structure model' '_database_2.pdbx_DOI'                      
2  3 'Structure model' '_database_2.pdbx_database_accession'       
3  3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 
4  3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 
5  3 'Structure model' '_pdbx_struct_conn_angle.value'             
6  3 'Structure model' '_struct_conn.pdbx_dist_value'              
7  3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'       
8  3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'            
9  3 'Structure model' '_struct_ref_seq_dif.details'               
10 3 'Structure model' '_struct_site.pdbx_auth_asym_id'            
11 3 'Structure model' '_struct_site.pdbx_auth_comp_id'            
12 3 'Structure model' '_struct_site.pdbx_auth_seq_id'             
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        3UD3 
_pdbx_database_status.recvd_initial_deposition_date   2011-10-27 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.SG_entry                        ? 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_pdbx_database_related.db_name 
_pdbx_database_related.db_id 
_pdbx_database_related.details 
_pdbx_database_related.content_type 
PDB 3UCU . unspecified 
PDB 3UCZ . unspecified 
PDB 3UD4 . unspecified 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Smith, K.D.'   1 
'Strobel, S.A.' 2 
# 
_citation.id                        primary 
_citation.title                     
'Structural and biochemical characterization of linear dinucleotide analogues bound to the c-di-GMP-I aptamer.' 
_citation.journal_abbrev            Biochemistry 
_citation.journal_volume            51 
_citation.page_first                425 
_citation.page_last                 432 
_citation.year                      2012 
_citation.journal_id_ASTM           BICHAW 
_citation.country                   US 
_citation.journal_id_ISSN           0006-2960 
_citation.journal_id_CSD            0033 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   22148472 
_citation.pdbx_database_id_DOI      10.1021/bi2016662 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Smith, K.D.'    1 ? 
primary 'Lipchock, S.V.' 2 ? 
primary 'Strobel, S.A.'  3 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     man 'U1 small nuclear ribonucleoprotein A' 11340.315 1  ? 'Y31H, Q36R' 'RNA binding domain, UNP residues 1-98' ? 
2 polymer     syn 'RNA (92-MER)'                         29943.758 1  ? ?            ?                                       
'c-di-GMP-I riboswitch' 
3 polymer     syn 
;RNA (5'-R(P*GP*A)-3')
;
629.454   1  ? ?            ?                                       pGpA                    
4 non-polymer syn 'MAGNESIUM ION'                        24.305    1  ? ?            ?                                       ? 
5 water       nat water                                  18.015    11 ? ?            ?                                       ? 
# 
_entity_name_com.entity_id   1 
_entity_name_com.name        'U1 snRNP A, U1-A, U1A' 
# 
loop_
_entity_poly.entity_id 
_entity_poly.type 
_entity_poly.nstd_linkage 
_entity_poly.nstd_monomer 
_entity_poly.pdbx_seq_one_letter_code 
_entity_poly.pdbx_seq_one_letter_code_can 
_entity_poly.pdbx_strand_id 
_entity_poly.pdbx_target_identifier 
1 'polypeptide(L)'   no no  
;MAVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDK
PMRIQYAKTDSDIIAKMK
;
;MAVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDK
PMRIQYAKTDSDIIAKMK
;
P ? 
2 polyribonucleotide no yes 
;(GTP)GUCACGCACAGGGCAAACCAUUCGAAAGAGUGGGACGCAAAGCCUCCGGCCUAAACCAUUGCACUCCGGUAGGUA
GCGGGGUUAUCGAUGG
;
;GGUCACGCACAGGGCAAACCAUUCGAAAGAGUGGGACGCAAAGCCUCCGGCCUAAACCAUUGCACUCCGGUAGGUAGCGG
GGUUAUCGAUGG
;
R ? 
3 polyribonucleotide no no  GA                                                                                                    
GA                                                                                                    A ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
4 'MAGNESIUM ION' MG  
5 water           HOH 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  MET n 
1 2  ALA n 
1 3  VAL n 
1 4  PRO n 
1 5  GLU n 
1 6  THR n 
1 7  ARG n 
1 8  PRO n 
1 9  ASN n 
1 10 HIS n 
1 11 THR n 
1 12 ILE n 
1 13 TYR n 
1 14 ILE n 
1 15 ASN n 
1 16 ASN n 
1 17 LEU n 
1 18 ASN n 
1 19 GLU n 
1 20 LYS n 
1 21 ILE n 
1 22 LYS n 
1 23 LYS n 
1 24 ASP n 
1 25 GLU n 
1 26 LEU n 
1 27 LYS n 
1 28 LYS n 
1 29 SER n 
1 30 LEU n 
1 31 HIS n 
1 32 ALA n 
1 33 ILE n 
1 34 PHE n 
1 35 SER n 
1 36 ARG n 
1 37 PHE n 
1 38 GLY n 
1 39 GLN n 
1 40 ILE n 
1 41 LEU n 
1 42 ASP n 
1 43 ILE n 
1 44 LEU n 
1 45 VAL n 
1 46 SER n 
1 47 ARG n 
1 48 SER n 
1 49 LEU n 
1 50 LYS n 
1 51 MET n 
1 52 ARG n 
1 53 GLY n 
1 54 GLN n 
1 55 ALA n 
1 56 PHE n 
1 57 VAL n 
1 58 ILE n 
1 59 PHE n 
1 60 LYS n 
1 61 GLU n 
1 62 VAL n 
1 63 SER n 
1 64 SER n 
1 65 ALA n 
1 66 THR n 
1 67 ASN n 
1 68 ALA n 
1 69 LEU n 
1 70 ARG n 
1 71 SER n 
1 72 MET n 
1 73 GLN n 
1 74 GLY n 
1 75 PHE n 
1 76 PRO n 
1 77 PHE n 
1 78 TYR n 
1 79 ASP n 
1 80 LYS n 
1 81 PRO n 
1 82 MET n 
1 83 ARG n 
1 84 ILE n 
1 85 GLN n 
1 86 TYR n 
1 87 ALA n 
1 88 LYS n 
1 89 THR n 
1 90 ASP n 
1 91 SER n 
1 92 ASP n 
1 93 ILE n 
1 94 ILE n 
1 95 ALA n 
1 96 LYS n 
1 97 MET n 
1 98 LYS n 
2 1  GTP n 
2 2  G   n 
2 3  U   n 
2 4  C   n 
2 5  A   n 
2 6  C   n 
2 7  G   n 
2 8  C   n 
2 9  A   n 
2 10 C   n 
2 11 A   n 
2 12 G   n 
2 13 G   n 
2 14 G   n 
2 15 C   n 
2 16 A   n 
2 17 A   n 
2 18 A   n 
2 19 C   n 
2 20 C   n 
2 21 A   n 
2 22 U   n 
2 23 U   n 
2 24 C   n 
2 25 G   n 
2 26 A   n 
2 27 A   n 
2 28 A   n 
2 29 G   n 
2 30 A   n 
2 31 G   n 
2 32 U   n 
2 33 G   n 
2 34 G   n 
2 35 G   n 
2 36 A   n 
2 37 C   n 
2 38 G   n 
2 39 C   n 
2 40 A   n 
2 41 A   n 
2 42 A   n 
2 43 G   n 
2 44 C   n 
2 45 C   n 
2 46 U   n 
2 47 C   n 
2 48 C   n 
2 49 G   n 
2 50 G   n 
2 51 C   n 
2 52 C   n 
2 53 U   n 
2 54 A   n 
2 55 A   n 
2 56 A   n 
2 57 C   n 
2 58 C   n 
2 59 A   n 
2 60 U   n 
2 61 U   n 
2 62 G   n 
2 63 C   n 
2 64 A   n 
2 65 C   n 
2 66 U   n 
2 67 C   n 
2 68 C   n 
2 69 G   n 
2 70 G   n 
2 71 U   n 
2 72 A   n 
2 73 G   n 
2 74 G   n 
2 75 U   n 
2 76 A   n 
2 77 G   n 
2 78 C   n 
2 79 G   n 
2 80 G   n 
2 81 G   n 
2 82 G   n 
2 83 U   n 
2 84 U   n 
2 85 A   n 
2 86 U   n 
2 87 C   n 
2 88 G   n 
2 89 A   n 
2 90 U   n 
2 91 G   n 
2 92 G   n 
3 1  G   n 
3 2  A   n 
# 
_entity_src_gen.entity_id                          1 
_entity_src_gen.pdbx_src_id                        1 
_entity_src_gen.pdbx_alt_source_flag               sample 
_entity_src_gen.pdbx_seq_type                      ? 
_entity_src_gen.pdbx_beg_seq_num                   ? 
_entity_src_gen.pdbx_end_seq_num                   ? 
_entity_src_gen.gene_src_common_name               human 
_entity_src_gen.gene_src_genus                     ? 
_entity_src_gen.pdbx_gene_src_gene                 SNRPA 
_entity_src_gen.gene_src_species                   ? 
_entity_src_gen.gene_src_strain                    ? 
_entity_src_gen.gene_src_tissue                    ? 
_entity_src_gen.gene_src_tissue_fraction           ? 
_entity_src_gen.gene_src_details                   ? 
_entity_src_gen.pdbx_gene_src_fragment             ? 
_entity_src_gen.pdbx_gene_src_scientific_name      'Homo sapiens' 
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id     9606 
_entity_src_gen.pdbx_gene_src_variant              ? 
_entity_src_gen.pdbx_gene_src_cell_line            ? 
_entity_src_gen.pdbx_gene_src_atcc                 ? 
_entity_src_gen.pdbx_gene_src_organ                ? 
_entity_src_gen.pdbx_gene_src_organelle            ? 
_entity_src_gen.pdbx_gene_src_cell                 ? 
_entity_src_gen.pdbx_gene_src_cellular_location    ? 
_entity_src_gen.host_org_common_name               ? 
_entity_src_gen.pdbx_host_org_scientific_name      'Escherichia coli' 
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id     511693 
_entity_src_gen.host_org_genus                     ? 
_entity_src_gen.pdbx_host_org_gene                 ? 
_entity_src_gen.pdbx_host_org_organ                ? 
_entity_src_gen.host_org_species                   ? 
_entity_src_gen.pdbx_host_org_tissue               ? 
_entity_src_gen.pdbx_host_org_tissue_fraction      ? 
_entity_src_gen.pdbx_host_org_strain               BL21 
_entity_src_gen.pdbx_host_org_variant              ? 
_entity_src_gen.pdbx_host_org_cell_line            ? 
_entity_src_gen.pdbx_host_org_atcc                 ? 
_entity_src_gen.pdbx_host_org_culture_collection   ? 
_entity_src_gen.pdbx_host_org_cell                 ? 
_entity_src_gen.pdbx_host_org_organelle            ? 
_entity_src_gen.pdbx_host_org_cellular_location    ? 
_entity_src_gen.pdbx_host_org_vector_type          plasmid 
_entity_src_gen.pdbx_host_org_vector               ? 
_entity_src_gen.host_org_details                   ? 
_entity_src_gen.expression_system_id               ? 
_entity_src_gen.plasmid_name                       pET11 
_entity_src_gen.plasmid_details                    ? 
_entity_src_gen.pdbx_description                   ? 
# 
_pdbx_entity_src_syn.entity_id              2 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       ? 
_pdbx_entity_src_syn.pdbx_end_seq_num       ? 
_pdbx_entity_src_syn.organism_scientific    ? 
_pdbx_entity_src_syn.organism_common_name   ? 
_pdbx_entity_src_syn.ncbi_taxonomy_id       ? 
_pdbx_entity_src_syn.details                'in vitro transcribed RNA transcript' 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
A   'RNA linking'       y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P'   347.221 
ALA 'L-peptide linking' y ALANINE                      ? 'C3 H7 N O2'        89.093  
ARG 'L-peptide linking' y ARGININE                     ? 'C6 H15 N4 O2 1'    175.209 
ASN 'L-peptide linking' y ASPARAGINE                   ? 'C4 H8 N2 O3'       132.118 
ASP 'L-peptide linking' y 'ASPARTIC ACID'              ? 'C4 H7 N O4'        133.103 
C   'RNA linking'       y "CYTIDINE-5'-MONOPHOSPHATE"  ? 'C9 H14 N3 O8 P'    323.197 
G   'RNA linking'       y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P'   363.221 
GLN 'L-peptide linking' y GLUTAMINE                    ? 'C5 H10 N2 O3'      146.144 
GLU 'L-peptide linking' y 'GLUTAMIC ACID'              ? 'C5 H9 N O4'        147.129 
GLY 'peptide linking'   y GLYCINE                      ? 'C2 H5 N O2'        75.067  
GTP non-polymer         n "GUANOSINE-5'-TRIPHOSPHATE"  ? 'C10 H16 N5 O14 P3' 523.180 
HIS 'L-peptide linking' y HISTIDINE                    ? 'C6 H10 N3 O2 1'    156.162 
HOH non-polymer         . WATER                        ? 'H2 O'              18.015  
ILE 'L-peptide linking' y ISOLEUCINE                   ? 'C6 H13 N O2'       131.173 
LEU 'L-peptide linking' y LEUCINE                      ? 'C6 H13 N O2'       131.173 
LYS 'L-peptide linking' y LYSINE                       ? 'C6 H15 N2 O2 1'    147.195 
MET 'L-peptide linking' y METHIONINE                   ? 'C5 H11 N O2 S'     149.211 
MG  non-polymer         . 'MAGNESIUM ION'              ? 'Mg 2'              24.305  
PHE 'L-peptide linking' y PHENYLALANINE                ? 'C9 H11 N O2'       165.189 
PRO 'L-peptide linking' y PROLINE                      ? 'C5 H9 N O2'        115.130 
SER 'L-peptide linking' y SERINE                       ? 'C3 H7 N O3'        105.093 
THR 'L-peptide linking' y THREONINE                    ? 'C4 H9 N O3'        119.119 
TYR 'L-peptide linking' y TYROSINE                     ? 'C9 H11 N O3'       181.189 
U   'RNA linking'       y "URIDINE-5'-MONOPHOSPHATE"   ? 'C9 H13 N2 O9 P'    324.181 
VAL 'L-peptide linking' y VALINE                       ? 'C5 H11 N O2'       117.146 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  MET 1  1   ?   ?   ?   P . n 
A 1 2  ALA 2  2   ?   ?   ?   P . n 
A 1 3  VAL 3  3   ?   ?   ?   P . n 
A 1 4  PRO 4  4   ?   ?   ?   P . n 
A 1 5  GLU 5  5   ?   ?   ?   P . n 
A 1 6  THR 6  6   ?   ?   ?   P . n 
A 1 7  ARG 7  7   7   ARG ARG P . n 
A 1 8  PRO 8  8   8   PRO PRO P . n 
A 1 9  ASN 9  9   9   ASN ASN P . n 
A 1 10 HIS 10 10  10  HIS HIS P . n 
A 1 11 THR 11 11  11  THR THR P . n 
A 1 12 ILE 12 12  12  ILE ILE P . n 
A 1 13 TYR 13 13  13  TYR TYR P . n 
A 1 14 ILE 14 14  14  ILE ILE P . n 
A 1 15 ASN 15 15  15  ASN ASN P . n 
A 1 16 ASN 16 16  16  ASN ASN P . n 
A 1 17 LEU 17 17  17  LEU LEU P . n 
A 1 18 ASN 18 18  18  ASN ASN P . n 
A 1 19 GLU 19 19  19  GLU GLU P . n 
A 1 20 LYS 20 20  20  LYS LYS P . n 
A 1 21 ILE 21 21  21  ILE ILE P . n 
A 1 22 LYS 22 22  22  LYS LYS P . n 
A 1 23 LYS 23 23  23  LYS LYS P . n 
A 1 24 ASP 24 24  24  ASP ASP P . n 
A 1 25 GLU 25 25  25  GLU GLU P . n 
A 1 26 LEU 26 26  26  LEU LEU P . n 
A 1 27 LYS 27 27  27  LYS LYS P . n 
A 1 28 LYS 28 28  28  LYS LYS P . n 
A 1 29 SER 29 29  29  SER SER P . n 
A 1 30 LEU 30 30  30  LEU LEU P . n 
A 1 31 HIS 31 31  31  HIS HIS P . n 
A 1 32 ALA 32 32  32  ALA ALA P . n 
A 1 33 ILE 33 33  33  ILE ILE P . n 
A 1 34 PHE 34 34  34  PHE PHE P . n 
A 1 35 SER 35 35  35  SER SER P . n 
A 1 36 ARG 36 36  36  ARG ARG P . n 
A 1 37 PHE 37 37  37  PHE PHE P . n 
A 1 38 GLY 38 38  38  GLY GLY P . n 
A 1 39 GLN 39 39  39  GLN GLN P . n 
A 1 40 ILE 40 40  40  ILE ILE P . n 
A 1 41 LEU 41 41  41  LEU LEU P . n 
A 1 42 ASP 42 42  42  ASP ASP P . n 
A 1 43 ILE 43 43  43  ILE ILE P . n 
A 1 44 LEU 44 44  44  LEU LEU P . n 
A 1 45 VAL 45 45  45  VAL VAL P . n 
A 1 46 SER 46 46  46  SER SER P . n 
A 1 47 ARG 47 47  47  ARG ARG P . n 
A 1 48 SER 48 48  48  SER SER P . n 
A 1 49 LEU 49 49  49  LEU LEU P . n 
A 1 50 LYS 50 50  50  LYS LYS P . n 
A 1 51 MET 51 51  51  MET MET P . n 
A 1 52 ARG 52 52  52  ARG ARG P . n 
A 1 53 GLY 53 53  53  GLY GLY P . n 
A 1 54 GLN 54 54  54  GLN GLN P . n 
A 1 55 ALA 55 55  55  ALA ALA P . n 
A 1 56 PHE 56 56  56  PHE PHE P . n 
A 1 57 VAL 57 57  57  VAL VAL P . n 
A 1 58 ILE 58 58  58  ILE ILE P . n 
A 1 59 PHE 59 59  59  PHE PHE P . n 
A 1 60 LYS 60 60  60  LYS LYS P . n 
A 1 61 GLU 61 61  61  GLU GLU P . n 
A 1 62 VAL 62 62  62  VAL VAL P . n 
A 1 63 SER 63 63  63  SER SER P . n 
A 1 64 SER 64 64  64  SER SER P . n 
A 1 65 ALA 65 65  65  ALA ALA P . n 
A 1 66 THR 66 66  66  THR THR P . n 
A 1 67 ASN 67 67  67  ASN ASN P . n 
A 1 68 ALA 68 68  68  ALA ALA P . n 
A 1 69 LEU 69 69  69  LEU LEU P . n 
A 1 70 ARG 70 70  70  ARG ARG P . n 
A 1 71 SER 71 71  71  SER SER P . n 
A 1 72 MET 72 72  72  MET MET P . n 
A 1 73 GLN 73 73  73  GLN GLN P . n 
A 1 74 GLY 74 74  74  GLY GLY P . n 
A 1 75 PHE 75 75  75  PHE PHE P . n 
A 1 76 PRO 76 76  76  PRO PRO P . n 
A 1 77 PHE 77 77  77  PHE PHE P . n 
A 1 78 TYR 78 78  78  TYR TYR P . n 
A 1 79 ASP 79 79  79  ASP ASP P . n 
A 1 80 LYS 80 80  80  LYS LYS P . n 
A 1 81 PRO 81 81  81  PRO PRO P . n 
A 1 82 MET 82 82  82  MET MET P . n 
A 1 83 ARG 83 83  83  ARG ARG P . n 
A 1 84 ILE 84 84  84  ILE ILE P . n 
A 1 85 GLN 85 85  85  GLN GLN P . n 
A 1 86 TYR 86 86  86  TYR TYR P . n 
A 1 87 ALA 87 87  87  ALA ALA P . n 
A 1 88 LYS 88 88  88  LYS LYS P . n 
A 1 89 THR 89 89  89  THR THR P . n 
A 1 90 ASP 90 90  90  ASP ASP P . n 
A 1 91 SER 91 91  91  SER SER P . n 
A 1 92 ASP 92 92  92  ASP ASP P . n 
A 1 93 ILE 93 93  93  ILE ILE P . n 
A 1 94 ILE 94 94  ?   ?   ?   P . n 
A 1 95 ALA 95 95  ?   ?   ?   P . n 
A 1 96 LYS 96 96  ?   ?   ?   P . n 
A 1 97 MET 97 97  ?   ?   ?   P . n 
A 1 98 LYS 98 98  ?   ?   ?   P . n 
B 2 1  GTP 1  8   8   GTP GTP R . n 
B 2 2  G   2  9   9   G   G   R . n 
B 2 3  U   3  10  10  U   U   R . n 
B 2 4  C   4  11  11  C   C   R . n 
B 2 5  A   5  12  12  A   A   R . n 
B 2 6  C   6  13  13  C   C   R . n 
B 2 7  G   7  14  14  G   G   R . n 
B 2 8  C   8  15  15  C   C   R . n 
B 2 9  A   9  16  16  A   A   R . n 
B 2 10 C   10 17  17  C   C   R . n 
B 2 11 A   11 18  18  A   A   R . n 
B 2 12 G   12 19  19  G   G   R . n 
B 2 13 G   13 20  20  G   G   R . n 
B 2 14 G   14 21  21  G   G   R . n 
B 2 15 C   15 22  22  C   C   R . n 
B 2 16 A   16 23  23  A   A   R . n 
B 2 17 A   17 24  24  A   A   R . n 
B 2 18 A   18 25  25  A   A   R . n 
B 2 19 C   19 26  26  C   C   R . n 
B 2 20 C   20 27  27  C   C   R . n 
B 2 21 A   21 28  28  A   A   R . n 
B 2 22 U   22 29  29  U   U   R . n 
B 2 23 U   23 30  30  U   U   R . n 
B 2 24 C   24 31  31  C   C   R . n 
B 2 25 G   25 32  32  G   G   R . n 
B 2 26 A   26 33  33  A   A   R . n 
B 2 27 A   27 34  34  A   A   R . n 
B 2 28 A   28 35  35  A   A   R . n 
B 2 29 G   29 36  36  G   G   R . n 
B 2 30 A   30 37  37  A   A   R . n 
B 2 31 G   31 38  38  G   G   R . n 
B 2 32 U   32 39  39  U   U   R . n 
B 2 33 G   33 40  40  G   G   R . n 
B 2 34 G   34 41  41  G   G   R . n 
B 2 35 G   35 42  42  G   G   R . n 
B 2 36 A   36 43  43  A   A   R . n 
B 2 37 C   37 44  44  C   C   R . n 
B 2 38 G   38 45  45  G   G   R . n 
B 2 39 C   39 46  46  C   C   R . n 
B 2 40 A   40 47  47  A   A   R . n 
B 2 41 A   41 48  48  A   A   R . n 
B 2 42 A   42 49  49  A   A   R . n 
B 2 43 G   43 50  50  G   G   R . n 
B 2 44 C   44 51  51  C   C   R . n 
B 2 45 C   45 52  52  C   C   R . n 
B 2 46 U   46 53  53  U   U   R . n 
B 2 47 C   47 54  54  C   C   R . n 
B 2 48 C   48 55  55  C   C   R . n 
B 2 49 G   49 56  56  G   G   R . n 
B 2 50 G   50 57  57  G   G   R . n 
B 2 51 C   51 58  58  C   C   R . n 
B 2 52 C   52 59  59  C   C   R . n 
B 2 53 U   53 60  60  U   U   R . n 
B 2 54 A   54 61  61  A   A   R . n 
B 2 55 A   55 62  62  A   A   R . n 
B 2 56 A   56 63  63  A   A   R . n 
B 2 57 C   57 64  64  C   C   R . n 
B 2 58 C   58 65  65  C   C   R . n 
B 2 59 A   59 660 660 A   A   R . n 
B 2 60 U   60 661 661 U   U   R . n 
B 2 61 U   61 662 662 U   U   R . n 
B 2 62 G   62 663 663 G   G   R . n 
B 2 63 C   63 664 664 C   C   R . n 
B 2 64 A   64 665 665 A   A   R . n 
B 2 65 C   65 666 666 C   C   R . n 
B 2 66 U   66 667 667 U   U   R . n 
B 2 67 C   67 668 668 C   C   R . n 
B 2 68 C   68 669 669 C   C   R . n 
B 2 69 G   69 75  75  G   G   R . n 
B 2 70 G   70 76  76  G   G   R . n 
B 2 71 U   71 77  77  U   U   R . n 
B 2 72 A   72 78  78  A   A   R . n 
B 2 73 G   73 79  79  G   G   R . n 
B 2 74 G   74 80  80  G   G   R . n 
B 2 75 U   75 81  81  U   U   R . n 
B 2 76 A   76 82  82  A   A   R . n 
B 2 77 G   77 83  83  G   G   R . n 
B 2 78 C   78 84  84  C   C   R . n 
B 2 79 G   79 85  85  G   G   R . n 
B 2 80 G   80 86  86  G   G   R . n 
B 2 81 G   81 87  87  G   G   R . n 
B 2 82 G   82 88  88  G   G   R . n 
B 2 83 U   83 89  89  U   U   R . n 
B 2 84 U   84 90  90  U   U   R . n 
B 2 85 A   85 91  91  A   A   R . n 
B 2 86 U   86 92  92  U   U   R . n 
B 2 87 C   87 93  93  C   C   R . n 
B 2 88 G   88 94  94  G   G   R . n 
B 2 89 A   89 95  95  A   A   R . n 
B 2 90 U   90 96  96  U   U   R . n 
B 2 91 G   91 97  97  G   G   R . n 
B 2 92 G   92 98  98  G   G   R . n 
C 3 1  G   1  1   1   G   G   A . n 
C 3 2  A   2  2   2   A   A   A . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
D 4 MG  1 1   1 MG  MO6 R . 
E 5 HOH 1 99  5 HOH HOH P . 
F 5 HOH 1 2   2 HOH HOH R . 
F 5 HOH 2 4   4 HOH HOH R . 
F 5 HOH 3 670 1 HOH HOH R . 
F 5 HOH 4 671 1 HOH MO6 R . 
F 5 HOH 5 672 1 HOH MO6 R . 
F 5 HOH 6 673 1 HOH MO6 R . 
F 5 HOH 7 674 1 HOH MO6 R . 
F 5 HOH 8 675 1 HOH MO6 R . 
F 5 HOH 9 676 1 HOH MO6 R . 
G 5 HOH 1 6   6 HOH HOH A . 
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
CBASS    'data collection' .        ? 1 
PHASER   phasing           .        ? 2 
REFMAC   refinement        5.5.0109 ? 3 
HKL-2000 'data reduction'  .        ? 4 
HKL-2000 'data scaling'    .        ? 5 
# 
_cell.entry_id           3UD3 
_cell.length_a           49.998 
_cell.length_b           45.391 
_cell.length_c           78.746 
_cell.angle_alpha        90.00 
_cell.angle_beta         94.98 
_cell.angle_gamma        90.00 
_cell.Z_PDB              2 
_cell.pdbx_unique_axis   ? 
_cell.length_a_esd       ? 
_cell.length_b_esd       ? 
_cell.length_c_esd       ? 
_cell.angle_alpha_esd    ? 
_cell.angle_beta_esd     ? 
_cell.angle_gamma_esd    ? 
# 
_symmetry.entry_id                         3UD3 
_symmetry.space_group_name_H-M             'P 1 21 1' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                4 
_symmetry.space_group_name_Hall            ? 
# 
_exptl.entry_id          3UD3 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      2.12 
_exptl_crystal.density_percent_sol   42.09 
_exptl_crystal.description           ? 
_exptl_crystal.F_000                 ? 
_exptl_crystal.preparation           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, HANGING DROP' 
_exptl_crystal_grow.temp            298 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              6 
_exptl_crystal_grow.pdbx_details    
'26% PEG550mme, 50 mM MES, pH 6.0, 5 mM MgSO4, 300 mM NaCl, VAPOR DIFFUSION, HANGING DROP, temperature 298K' 
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           100 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               CCD 
_diffrn_detector.type                   'ADSC QUANTUM 315' 
_diffrn_detector.pdbx_collection_date   2010-04-01 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    'Si(111)' 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   1.1 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      SYNCHROTRON 
_diffrn_source.type                        'NSLS BEAMLINE X25' 
_diffrn_source.pdbx_synchrotron_site       NSLS 
_diffrn_source.pdbx_synchrotron_beamline   X25 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        1.1 
# 
_reflns.entry_id                     3UD3 
_reflns.observed_criterion_sigma_I   2.0 
_reflns.observed_criterion_sigma_F   2.0 
_reflns.d_resolution_low             50 
_reflns.d_resolution_high            3.1 
_reflns.number_obs                   6662 
_reflns.number_all                   6683 
_reflns.percent_possible_obs         99.7 
_reflns.pdbx_Rmerge_I_obs            0.14 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        15.0 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              6.9 
_reflns.R_free_details               ? 
_reflns.limit_h_max                  ? 
_reflns.limit_h_min                  ? 
_reflns.limit_k_max                  ? 
_reflns.limit_k_min                  ? 
_reflns.limit_l_max                  ? 
_reflns.limit_l_min                  ? 
_reflns.observed_criterion_F_max     ? 
_reflns.observed_criterion_F_min     ? 
_reflns.pdbx_chi_squared             ? 
_reflns.pdbx_scaling_rejects         ? 
_reflns.pdbx_ordinal                 1 
_reflns.pdbx_diffrn_id               1 
# 
_reflns_shell.d_res_high             3.10 
_reflns_shell.d_res_low              3.15 
_reflns_shell.percent_possible_all   100 
_reflns_shell.Rmerge_I_obs           0.73 
_reflns_shell.pdbx_Rsym_value        ? 
_reflns_shell.meanI_over_sigI_obs    2.2 
_reflns_shell.pdbx_redundancy        5.3 
_reflns_shell.percent_possible_obs   ? 
_reflns_shell.number_unique_all      ? 
_reflns_shell.number_measured_all    ? 
_reflns_shell.number_measured_obs    ? 
_reflns_shell.number_unique_obs      ? 
_reflns_shell.pdbx_chi_squared       ? 
_reflns_shell.pdbx_ordinal           1 
_reflns_shell.pdbx_diffrn_id         1 
# 
_refine.entry_id                                 3UD3 
_refine.ls_number_reflns_obs                     6320 
_refine.ls_number_reflns_all                     6320 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          . 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             50 
_refine.ls_d_res_high                            3.1 
_refine.ls_percent_reflns_obs                    99.10 
_refine.ls_R_factor_obs                          0.18661 
_refine.ls_R_factor_all                          0.18661 
_refine.ls_R_factor_R_work                       0.18318 
_refine.ls_R_factor_R_free                       0.25765 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 4.6 
_refine.ls_number_reflns_R_free                  308 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.correlation_coeff_Fo_to_Fc               0.953 
_refine.correlation_coeff_Fo_to_Fc_free          0.884 
_refine.B_iso_mean                               124.351 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.solvent_model_details                    MASK 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_solvent_vdw_probe_radii             1.40 
_refine.pdbx_solvent_ion_probe_radii             0.80 
_refine.pdbx_solvent_shrinkage_radii             0.80 
_refine.pdbx_ls_cross_valid_method               THROUGHOUT 
_refine.details                                  'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          'MOLECULAR REPLACEMENT' 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       'MAXIMUM LIKELIHOOD' 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            RANDOM 
_refine.pdbx_overall_ESU_R_Free                  0.534 
_refine.overall_SU_ML                            0.417 
_refine.pdbx_overall_phase_error                 ? 
_refine.overall_SU_B                             ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.B_iso_min                                ? 
_refine.B_iso_max                                ? 
_refine.overall_SU_R_free                        ? 
_refine.ls_wR_factor_R_free                      ? 
_refine.ls_wR_factor_R_work                      ? 
_refine.overall_FOM_free_R_set                   ? 
_refine.overall_FOM_work_R_set                   ? 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        712 
_refine_hist.pdbx_number_atoms_nucleic_acid   2030 
_refine_hist.pdbx_number_atoms_ligand         1 
_refine_hist.number_atoms_solvent             11 
_refine_hist.number_atoms_total               2754 
_refine_hist.d_res_high                       3.1 
_refine_hist.d_res_low                        50 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_restraint_function 
_refine_ls_restr.pdbx_refine_id 
r_bond_refined_d       0.006  0.021  ? 3002 ? 'X-RAY DIFFRACTION' 
r_angle_refined_deg    1.039  2.775  ? 4529 ? 'X-RAY DIFFRACTION' 
r_dihedral_angle_1_deg 5.213  5.000  ? 86   ? 'X-RAY DIFFRACTION' 
r_dihedral_angle_2_deg 35.206 23.235 ? 34   ? 'X-RAY DIFFRACTION' 
r_dihedral_angle_3_deg 16.700 15.000 ? 144  ? 'X-RAY DIFFRACTION' 
r_dihedral_angle_4_deg 18.088 15.000 ? 6    ? 'X-RAY DIFFRACTION' 
r_gen_planes_refined   0.003  0.020  ? 1518 ? 'X-RAY DIFFRACTION' 
# 
_refine_ls_shell.pdbx_total_number_of_bins_used   20 
_refine_ls_shell.d_res_high                       3.082 
_refine_ls_shell.d_res_low                        3.162 
_refine_ls_shell.number_reflns_R_work             444 
_refine_ls_shell.R_factor_R_work                  0.249 
_refine_ls_shell.percent_reflns_obs               96.91 
_refine_ls_shell.R_factor_R_free                  0.331 
_refine_ls_shell.R_factor_R_free_error            ? 
_refine_ls_shell.percent_reflns_R_free            ? 
_refine_ls_shell.number_reflns_R_free             27 
_refine_ls_shell.number_reflns_all                ? 
_refine_ls_shell.R_factor_all                     ? 
_refine_ls_shell.number_reflns_obs                444 
_refine_ls_shell.redundancy_reflns_obs            ? 
_refine_ls_shell.pdbx_refine_id                   'X-RAY DIFFRACTION' 
# 
_database_PDB_matrix.entry_id          3UD3 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  3UD3 
_struct.title                     'The C92U mutant c-di-GMP-I riboswitch bound to pGpA' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        3UD3 
_struct_keywords.pdbx_keywords   'SIGNALING PROTEIN/RNA' 
_struct_keywords.text            'riboswitch, SIGNALING PROTEIN-RNA complex' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
C N N 3 ? 
D N N 4 ? 
E N N 5 ? 
F N N 5 ? 
G N N 5 ? 
# 
loop_
_struct_ref.id 
_struct_ref.db_name 
_struct_ref.db_code 
_struct_ref.pdbx_db_accession 
_struct_ref.entity_id 
_struct_ref.pdbx_seq_one_letter_code 
_struct_ref.pdbx_align_begin 
_struct_ref.pdbx_db_isoform 
1 UNP SNRPA_HUMAN P09012 1 
;MAVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDK
PMRIQYAKTDSDIIAKMK
;
1 ? 
2 PDB 3UD3        3UD3   2 ?                                                                                                     ? 
? 
3 PDB 3UD3        3UD3   3 ?                                                                                                     ? 
? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 3UD3 P 1 ? 98 ? P09012 1 ? 98 ? 1 98 
2 2 3UD3 R 1 ? 92 ? 3UD3   8 ? 98 ? 8 98 
3 3 3UD3 A 1 ? 2  ? 3UD3   1 ? 2  ? 1 2  
# 
loop_
_struct_ref_seq_dif.align_id 
_struct_ref_seq_dif.pdbx_pdb_id_code 
_struct_ref_seq_dif.mon_id 
_struct_ref_seq_dif.pdbx_pdb_strand_id 
_struct_ref_seq_dif.seq_num 
_struct_ref_seq_dif.pdbx_pdb_ins_code 
_struct_ref_seq_dif.pdbx_seq_db_name 
_struct_ref_seq_dif.pdbx_seq_db_accession_code 
_struct_ref_seq_dif.db_mon_id 
_struct_ref_seq_dif.pdbx_seq_db_seq_num 
_struct_ref_seq_dif.details 
_struct_ref_seq_dif.pdbx_auth_seq_num 
_struct_ref_seq_dif.pdbx_ordinal 
1 3UD3 HIS P 31 ? UNP P09012 TYR 31 'engineered mutation' 31 1 
1 3UD3 ARG P 36 ? UNP P09012 GLN 36 'engineered mutation' 36 2 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   trimeric 
_pdbx_struct_assembly.oligomeric_count     3 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D,E,F,G 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
_struct_biol.id        1 
_struct_biol.details   ? 
# 
loop_
_struct_conf.conf_type_id 
_struct_conf.id 
_struct_conf.pdbx_PDB_helix_id 
_struct_conf.beg_label_comp_id 
_struct_conf.beg_label_asym_id 
_struct_conf.beg_label_seq_id 
_struct_conf.pdbx_beg_PDB_ins_code 
_struct_conf.end_label_comp_id 
_struct_conf.end_label_asym_id 
_struct_conf.end_label_seq_id 
_struct_conf.pdbx_end_PDB_ins_code 
_struct_conf.beg_auth_comp_id 
_struct_conf.beg_auth_asym_id 
_struct_conf.beg_auth_seq_id 
_struct_conf.end_auth_comp_id 
_struct_conf.end_auth_asym_id 
_struct_conf.end_auth_seq_id 
_struct_conf.pdbx_PDB_helix_class 
_struct_conf.details 
_struct_conf.pdbx_PDB_helix_length 
HELX_P HELX_P1 1 LYS A 22 ? SER A 35 ? LYS P 22 SER P 35 1 ? 14 
HELX_P HELX_P2 2 GLU A 61 ? MET A 72 ? GLU P 61 MET P 72 1 ? 12 
# 
_struct_conf_type.id          HELX_P 
_struct_conf_type.criteria    ? 
_struct_conf_type.reference   ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
covale1  covale both ? B GTP 1  "O3'" ? ? ? 1_555 B G   2  P  ? ? R GTP 8  R G   9   1_555 ? ? ? ? ? ? ?                    1.603 
? ? 
covale2  covale both ? B C   58 "O3'" ? ? ? 1_555 B A   59 P  ? ? R C   65 R A   660 1_555 ? ? ? ? ? ? ?                    1.601 
? ? 
metalc1  metalc ?    ? D MG  .  MG    ? ? ? 1_555 F HOH .  O  ? ? R MG  1  R HOH 671 1_555 ? ? ? ? ? ? ?                    2.186 
? ? 
metalc2  metalc ?    ? D MG  .  MG    ? ? ? 1_555 F HOH .  O  ? ? R MG  1  R HOH 672 1_555 ? ? ? ? ? ? ?                    2.181 
? ? 
metalc3  metalc ?    ? D MG  .  MG    ? ? ? 1_555 F HOH .  O  ? ? R MG  1  R HOH 673 1_555 ? ? ? ? ? ? ?                    2.182 
? ? 
metalc4  metalc ?    ? D MG  .  MG    ? ? ? 1_555 F HOH .  O  ? ? R MG  1  R HOH 674 1_555 ? ? ? ? ? ? ?                    2.180 
? ? 
metalc5  metalc ?    ? D MG  .  MG    ? ? ? 1_555 F HOH .  O  ? ? R MG  1  R HOH 675 1_555 ? ? ? ? ? ? ?                    2.188 
? ? 
metalc6  metalc ?    ? D MG  .  MG    ? ? ? 1_555 F HOH .  O  ? ? R MG  1  R HOH 676 1_555 ? ? ? ? ? ? ?                    2.180 
? ? 
hydrog1  hydrog ?    ? B C   4  O2    ? ? ? 1_555 B G   92 N2 ? ? R C   11 R G   98  1_555 ? ? ? ? ? ? 'C-G PAIR'           ?     
? ? 
hydrog2  hydrog ?    ? B A   5  N1    ? ? ? 1_555 B G   91 N1 ? ? R A   12 R G   97  1_555 ? ? ? ? ? ? TYPE_8_PAIR          ?     
? ? 
hydrog3  hydrog ?    ? B A   5  N6    ? ? ? 1_555 B G   91 O6 ? ? R A   12 R G   97  1_555 ? ? ? ? ? ? TYPE_8_PAIR          ?     
? ? 
hydrog4  hydrog ?    ? B C   6  N3    ? ? ? 1_555 B G   88 N1 ? ? R C   13 R G   94  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog5  hydrog ?    ? B C   6  N4    ? ? ? 1_555 B G   88 O6 ? ? R C   13 R G   94  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog6  hydrog ?    ? B C   6  O2    ? ? ? 1_555 B G   88 N2 ? ? R C   13 R G   94  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog7  hydrog ?    ? B G   7  N2    ? ? ? 1_555 B A   9  N7 ? ? R G   14 R A   16  1_555 ? ? ? ? ? ? 'G-A MISPAIR'        ?     
? ? 
hydrog8  hydrog ?    ? B G   7  N1    ? ? ? 1_555 B C   87 N3 ? ? R G   14 R C   93  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog9  hydrog ?    ? B G   7  N2    ? ? ? 1_555 B C   87 O2 ? ? R G   14 R C   93  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog10 hydrog ?    ? B G   7  O6    ? ? ? 1_555 B C   87 N4 ? ? R G   14 R C   93  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog11 hydrog ?    ? B C   10 N4    ? ? ? 1_555 B C   87 O2 ? ? R C   17 R C   93  1_555 ? ? ? ? ? ? 'C-C MISPAIR'        ?     
? ? 
hydrog12 hydrog ?    ? B C   10 N4    ? ? ? 1_555 C A   2  N3 ? ? R C   17 A A   2   1_555 ? ? ? ? ? ? 'C-A MISPAIR'        ?     
? ? 
hydrog13 hydrog ?    ? B A   11 N6    ? ? ? 1_555 B U   86 O2 ? ? R A   18 R U   92  1_555 ? ? ? ? ? ? 'A-U PAIR'           ?     
? ? 
hydrog14 hydrog ?    ? B G   12 O6    ? ? ? 1_555 B A   40 N6 ? ? R G   19 R A   47  1_555 ? ? ? ? ? ? 'G-A MISPAIR'        ?     
? ? 
hydrog15 hydrog ?    ? B G   13 N1    ? ? ? 1_555 C G   1  N7 ? ? R G   20 A G   1   1_555 ? ? ? ? ? ? TYPE_7_PAIR          ?     
? ? 
hydrog16 hydrog ?    ? B G   13 N2    ? ? ? 1_555 C G   1  O6 ? ? R G   20 A G   1   1_555 ? ? ? ? ? ? TYPE_7_PAIR          ?     
? ? 
hydrog17 hydrog ?    ? B G   14 N1    ? ? ? 1_555 B C   39 N3 ? ? R G   21 R C   46  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog18 hydrog ?    ? B G   14 N2    ? ? ? 1_555 B C   39 O2 ? ? R G   21 R C   46  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog19 hydrog ?    ? B G   14 O6    ? ? ? 1_555 B C   39 N4 ? ? R G   21 R C   46  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog20 hydrog ?    ? B C   15 N3    ? ? ? 1_555 B G   38 N1 ? ? R C   22 R G   45  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog21 hydrog ?    ? B C   15 N4    ? ? ? 1_555 B G   38 O6 ? ? R C   22 R G   45  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog22 hydrog ?    ? B C   15 O2    ? ? ? 1_555 B G   38 N2 ? ? R C   22 R G   45  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog23 hydrog ?    ? B A   16 N3    ? ? ? 1_555 B C   37 N4 ? ? R A   23 R C   44  1_555 ? ? ? ? ? ? 'A-C MISPAIR'        ?     
? ? 
hydrog24 hydrog ?    ? B A   18 N6    ? ? ? 1_555 B G   35 N3 ? ? R A   25 R G   42  1_555 ? ? ? ? ? ? TYPE_11_PAIR         ?     
? ? 
hydrog25 hydrog ?    ? B A   18 N7    ? ? ? 1_555 B G   35 N2 ? ? R A   25 R G   42  1_555 ? ? ? ? ? ? TYPE_11_PAIR         ?     
? ? 
hydrog26 hydrog ?    ? B C   19 N3    ? ? ? 1_555 B G   34 N1 ? ? R C   26 R G   41  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog27 hydrog ?    ? B C   19 N4    ? ? ? 1_555 B G   34 O6 ? ? R C   26 R G   41  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog28 hydrog ?    ? B C   19 O2    ? ? ? 1_555 B G   34 N2 ? ? R C   26 R G   41  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog29 hydrog ?    ? B C   20 N3    ? ? ? 1_555 B G   33 N1 ? ? R C   27 R G   40  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog30 hydrog ?    ? B C   20 N4    ? ? ? 1_555 B G   33 O6 ? ? R C   27 R G   40  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog31 hydrog ?    ? B C   20 O2    ? ? ? 1_555 B G   33 N2 ? ? R C   27 R G   40  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog32 hydrog ?    ? B A   21 N1    ? ? ? 1_555 B U   32 N3 ? ? R A   28 R U   39  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog33 hydrog ?    ? B A   21 N6    ? ? ? 1_555 B U   32 O4 ? ? R A   28 R U   39  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog34 hydrog ?    ? B U   22 N3    ? ? ? 1_555 B G   31 O6 ? ? R U   29 R G   38  1_555 ? ? ? ? ? ? TYPE_28_PAIR         ?     
? ? 
hydrog35 hydrog ?    ? B U   22 O2    ? ? ? 1_555 B G   31 N1 ? ? R U   29 R G   38  1_555 ? ? ? ? ? ? TYPE_28_PAIR         ?     
? ? 
hydrog36 hydrog ?    ? B U   23 N3    ? ? ? 1_555 B A   30 N1 ? ? R U   30 R A   37  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog37 hydrog ?    ? B U   23 O4    ? ? ? 1_555 B A   30 N6 ? ? R U   30 R A   37  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog38 hydrog ?    ? B C   24 N3    ? ? ? 1_555 B G   29 N1 ? ? R C   31 R G   36  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog39 hydrog ?    ? B C   24 N4    ? ? ? 1_555 B G   29 O6 ? ? R C   31 R G   36  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog40 hydrog ?    ? B C   24 O2    ? ? ? 1_555 B G   29 N2 ? ? R C   31 R G   36  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog41 hydrog ?    ? B G   25 N2    ? ? ? 1_555 B A   28 N7 ? ? R G   32 R A   35  1_555 ? ? ? ? ? ? 'G-A MISPAIR'        ?     
? ? 
hydrog42 hydrog ?    ? B A   28 N3    ? ? ? 1_555 B G   73 N2 ? ? R A   35 R G   79  1_555 ? ? ? ? ? ? 'A-G MISPAIR'        ?     
? ? 
hydrog43 hydrog ?    ? B C   37 N3    ? ? ? 1_555 B G   77 N1 ? ? R C   44 R G   83  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog44 hydrog ?    ? B C   37 N4    ? ? ? 1_555 B G   77 O6 ? ? R C   44 R G   83  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog45 hydrog ?    ? B C   37 O2    ? ? ? 1_555 B G   77 N2 ? ? R C   44 R G   83  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog46 hydrog ?    ? B G   38 N2    ? ? ? 1_555 B A   42 N3 ? ? R G   45 R A   49  1_555 ? ? ? ? ? ? 'G-A MISPAIR'        ?     
? ? 
hydrog47 hydrog ?    ? B A   41 N6    ? ? ? 1_555 B U   84 O2 ? ? R A   48 R U   90  1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ?     
? ? 
hydrog48 hydrog ?    ? B A   41 N7    ? ? ? 1_555 B U   84 N3 ? ? R A   48 R U   90  1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ?     
? ? 
hydrog49 hydrog ?    ? B G   43 N1    ? ? ? 1_555 B U   83 O2 ? ? R G   50 R U   89  1_555 ? ? ? ? ? ? TYPE_28_PAIR         ?     
? ? 
hydrog50 hydrog ?    ? B G   43 O6    ? ? ? 1_555 B U   83 N3 ? ? R G   50 R U   89  1_555 ? ? ? ? ? ? TYPE_28_PAIR         ?     
? ? 
hydrog51 hydrog ?    ? B C   44 N3    ? ? ? 1_555 B G   82 N1 ? ? R C   51 R G   88  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog52 hydrog ?    ? B C   44 N4    ? ? ? 1_555 B G   82 O6 ? ? R C   51 R G   88  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog53 hydrog ?    ? B C   44 O2    ? ? ? 1_555 B G   82 N2 ? ? R C   51 R G   88  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog54 hydrog ?    ? B C   45 N3    ? ? ? 1_555 B G   81 N1 ? ? R C   52 R G   87  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog55 hydrog ?    ? B C   45 N4    ? ? ? 1_555 B G   81 O6 ? ? R C   52 R G   87  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog56 hydrog ?    ? B C   45 O2    ? ? ? 1_555 B G   81 N2 ? ? R C   52 R G   87  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog57 hydrog ?    ? B U   46 O2    ? ? ? 1_555 B C   48 N4 ? ? R U   53 R C   55  1_555 ? ? ? ? ? ? 'U-C MISPAIR'        ?     
? ? 
hydrog58 hydrog ?    ? B C   47 N4    ? ? ? 1_555 B A   76 N1 ? ? R C   54 R A   82  1_555 ? ? ? ? ? ? 'C-A MISPAIR'        ?     
? ? 
hydrog59 hydrog ?    ? B C   47 N3    ? ? ? 1_555 B G   80 N1 ? ? R C   54 R G   86  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog60 hydrog ?    ? B C   47 N4    ? ? ? 1_555 B G   80 O6 ? ? R C   54 R G   86  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog61 hydrog ?    ? B C   47 O2    ? ? ? 1_555 B G   80 N2 ? ? R C   54 R G   86  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog62 hydrog ?    ? B C   47 N3    ? ? ? 1_555 B G   81 N2 ? ? R C   54 R G   87  1_555 ? ? ? ? ? ? 'C-G PAIR'           ?     
? ? 
hydrog63 hydrog ?    ? B C   48 N3    ? ? ? 1_555 B G   79 N1 ? ? R C   55 R G   85  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog64 hydrog ?    ? B C   48 N4    ? ? ? 1_555 B G   79 O6 ? ? R C   55 R G   85  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog65 hydrog ?    ? B C   48 O2    ? ? ? 1_555 B G   79 N2 ? ? R C   55 R G   85  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog66 hydrog ?    ? B G   49 N1    ? ? ? 1_555 B C   78 N3 ? ? R G   56 R C   84  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog67 hydrog ?    ? B G   49 N2    ? ? ? 1_555 B C   78 O2 ? ? R G   56 R C   84  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog68 hydrog ?    ? B G   49 O6    ? ? ? 1_555 B C   78 N4 ? ? R G   56 R C   84  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog69 hydrog ?    ? B G   50 N1    ? ? ? 1_555 B U   75 O2 ? ? R G   57 R U   81  1_555 ? ? ? ? ? ? TYPE_28_PAIR         ?     
? ? 
hydrog70 hydrog ?    ? B G   50 O6    ? ? ? 1_555 B U   75 N3 ? ? R G   57 R U   81  1_555 ? ? ? ? ? ? TYPE_28_PAIR         ?     
? ? 
hydrog71 hydrog ?    ? B C   51 N3    ? ? ? 1_555 B G   74 N1 ? ? R C   58 R G   80  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog72 hydrog ?    ? B C   51 N4    ? ? ? 1_555 B G   74 O6 ? ? R C   58 R G   80  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog73 hydrog ?    ? B C   51 O2    ? ? ? 1_555 B G   74 N2 ? ? R C   58 R G   80  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog74 hydrog ?    ? B C   52 N3    ? ? ? 1_555 B G   73 N1 ? ? R C   59 R G   79  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog75 hydrog ?    ? B C   52 N4    ? ? ? 1_555 B G   73 O6 ? ? R C   59 R G   79  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog76 hydrog ?    ? B C   52 O2    ? ? ? 1_555 B G   73 N2 ? ? R C   59 R G   79  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog77 hydrog ?    ? B U   53 N3    ? ? ? 1_555 B A   72 N1 ? ? R U   60 R A   78  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog78 hydrog ?    ? B U   53 O4    ? ? ? 1_555 B A   72 N6 ? ? R U   60 R A   78  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog79 hydrog ?    ? B A   54 N1    ? ? ? 1_555 B U   71 N3 ? ? R A   61 R U   77  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog80 hydrog ?    ? B A   54 N6    ? ? ? 1_555 B U   71 O4 ? ? R A   61 R U   77  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog81 hydrog ?    ? B C   57 N3    ? ? ? 1_555 B G   70 N1 ? ? R C   64 R G   76  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog82 hydrog ?    ? B C   57 N4    ? ? ? 1_555 B G   70 O6 ? ? R C   64 R G   76  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog83 hydrog ?    ? B C   57 O2    ? ? ? 1_555 B G   70 N2 ? ? R C   64 R G   76  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog84 hydrog ?    ? B C   58 N3    ? ? ? 1_555 B G   69 N1 ? ? R C   65 R G   75  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog85 hydrog ?    ? B C   58 N4    ? ? ? 1_555 B G   69 O6 ? ? R C   65 R G   75  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog86 hydrog ?    ? B C   58 O2    ? ? ? 1_555 B G   69 N2 ? ? R C   65 R G   75  1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog87 hydrog ?    ? B U   86 N3    ? ? ? 1_555 C A   2  N1 ? ? R U   92 A A   2   1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog88 hydrog ?    ? B U   86 O4    ? ? ? 1_555 C A   2  N6 ? ? R U   92 A A   2   1_555 ? ? ? ? ? ? WATSON-CRICK         ?     
? ? 
hydrog89 hydrog ?    ? B G   88 N2    ? ? ? 1_555 B A   89 N1 ? ? R G   94 R A   95  1_555 ? ? ? ? ? ? 'G-A MISPAIR'        ?     
? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
covale ? ? 
metalc ? ? 
hydrog ? ? 
# 
loop_
_pdbx_struct_conn_angle.id 
_pdbx_struct_conn_angle.ptnr1_label_atom_id 
_pdbx_struct_conn_angle.ptnr1_label_alt_id 
_pdbx_struct_conn_angle.ptnr1_label_asym_id 
_pdbx_struct_conn_angle.ptnr1_label_comp_id 
_pdbx_struct_conn_angle.ptnr1_label_seq_id 
_pdbx_struct_conn_angle.ptnr1_auth_atom_id 
_pdbx_struct_conn_angle.ptnr1_auth_asym_id 
_pdbx_struct_conn_angle.ptnr1_auth_comp_id 
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr1_symmetry 
_pdbx_struct_conn_angle.ptnr2_label_atom_id 
_pdbx_struct_conn_angle.ptnr2_label_alt_id 
_pdbx_struct_conn_angle.ptnr2_label_asym_id 
_pdbx_struct_conn_angle.ptnr2_label_comp_id 
_pdbx_struct_conn_angle.ptnr2_label_seq_id 
_pdbx_struct_conn_angle.ptnr2_auth_atom_id 
_pdbx_struct_conn_angle.ptnr2_auth_asym_id 
_pdbx_struct_conn_angle.ptnr2_auth_comp_id 
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr2_symmetry 
_pdbx_struct_conn_angle.ptnr3_label_atom_id 
_pdbx_struct_conn_angle.ptnr3_label_alt_id 
_pdbx_struct_conn_angle.ptnr3_label_asym_id 
_pdbx_struct_conn_angle.ptnr3_label_comp_id 
_pdbx_struct_conn_angle.ptnr3_label_seq_id 
_pdbx_struct_conn_angle.ptnr3_auth_atom_id 
_pdbx_struct_conn_angle.ptnr3_auth_asym_id 
_pdbx_struct_conn_angle.ptnr3_auth_comp_id 
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr3_symmetry 
_pdbx_struct_conn_angle.value 
_pdbx_struct_conn_angle.value_esd 
1  O ? F HOH . ? R HOH 671 ? 1_555 MG ? D MG . ? R MG 1 ? 1_555 O ? F HOH . ? R HOH 672 ? 1_555 179.9 ? 
2  O ? F HOH . ? R HOH 671 ? 1_555 MG ? D MG . ? R MG 1 ? 1_555 O ? F HOH . ? R HOH 673 ? 1_555 89.8  ? 
3  O ? F HOH . ? R HOH 672 ? 1_555 MG ? D MG . ? R MG 1 ? 1_555 O ? F HOH . ? R HOH 673 ? 1_555 90.3  ? 
4  O ? F HOH . ? R HOH 671 ? 1_555 MG ? D MG . ? R MG 1 ? 1_555 O ? F HOH . ? R HOH 674 ? 1_555 90.1  ? 
5  O ? F HOH . ? R HOH 672 ? 1_555 MG ? D MG . ? R MG 1 ? 1_555 O ? F HOH . ? R HOH 674 ? 1_555 89.8  ? 
6  O ? F HOH . ? R HOH 673 ? 1_555 MG ? D MG . ? R MG 1 ? 1_555 O ? F HOH . ? R HOH 674 ? 1_555 179.9 ? 
7  O ? F HOH . ? R HOH 671 ? 1_555 MG ? D MG . ? R MG 1 ? 1_555 O ? F HOH . ? R HOH 675 ? 1_555 90.5  ? 
8  O ? F HOH . ? R HOH 672 ? 1_555 MG ? D MG . ? R MG 1 ? 1_555 O ? F HOH . ? R HOH 675 ? 1_555 89.6  ? 
9  O ? F HOH . ? R HOH 673 ? 1_555 MG ? D MG . ? R MG 1 ? 1_555 O ? F HOH . ? R HOH 675 ? 1_555 89.6  ? 
10 O ? F HOH . ? R HOH 674 ? 1_555 MG ? D MG . ? R MG 1 ? 1_555 O ? F HOH . ? R HOH 675 ? 1_555 90.4  ? 
11 O ? F HOH . ? R HOH 671 ? 1_555 MG ? D MG . ? R MG 1 ? 1_555 O ? F HOH . ? R HOH 676 ? 1_555 89.5  ? 
12 O ? F HOH . ? R HOH 672 ? 1_555 MG ? D MG . ? R MG 1 ? 1_555 O ? F HOH . ? R HOH 676 ? 1_555 90.4  ? 
13 O ? F HOH . ? R HOH 673 ? 1_555 MG ? D MG . ? R MG 1 ? 1_555 O ? F HOH . ? R HOH 676 ? 1_555 91.4  ? 
14 O ? F HOH . ? R HOH 674 ? 1_555 MG ? D MG . ? R MG 1 ? 1_555 O ? F HOH . ? R HOH 676 ? 1_555 88.6  ? 
15 O ? F HOH . ? R HOH 675 ? 1_555 MG ? D MG . ? R MG 1 ? 1_555 O ? F HOH . ? R HOH 676 ? 1_555 179.0 ? 
# 
_struct_sheet.id               A 
_struct_sheet.type             ? 
_struct_sheet.number_strands   4 
_struct_sheet.details          ? 
# 
loop_
_struct_sheet_order.sheet_id 
_struct_sheet_order.range_id_1 
_struct_sheet_order.range_id_2 
_struct_sheet_order.offset 
_struct_sheet_order.sense 
A 1 2 ? anti-parallel 
A 2 3 ? anti-parallel 
A 3 4 ? anti-parallel 
# 
loop_
_struct_sheet_range.sheet_id 
_struct_sheet_range.id 
_struct_sheet_range.beg_label_comp_id 
_struct_sheet_range.beg_label_asym_id 
_struct_sheet_range.beg_label_seq_id 
_struct_sheet_range.pdbx_beg_PDB_ins_code 
_struct_sheet_range.end_label_comp_id 
_struct_sheet_range.end_label_asym_id 
_struct_sheet_range.end_label_seq_id 
_struct_sheet_range.pdbx_end_PDB_ins_code 
_struct_sheet_range.beg_auth_comp_id 
_struct_sheet_range.beg_auth_asym_id 
_struct_sheet_range.beg_auth_seq_id 
_struct_sheet_range.end_auth_comp_id 
_struct_sheet_range.end_auth_asym_id 
_struct_sheet_range.end_auth_seq_id 
A 1 ASP A 42 ? LEU A 44 ? ASP P 42 LEU P 44 
A 2 ALA A 55 ? ILE A 58 ? ALA P 55 ILE P 58 
A 3 THR A 11 ? ASN A 15 ? THR P 11 ASN P 15 
A 4 ARG A 83 ? TYR A 86 ? ARG P 83 TYR P 86 
# 
loop_
_pdbx_struct_sheet_hbond.sheet_id 
_pdbx_struct_sheet_hbond.range_id_1 
_pdbx_struct_sheet_hbond.range_id_2 
_pdbx_struct_sheet_hbond.range_1_label_atom_id 
_pdbx_struct_sheet_hbond.range_1_label_comp_id 
_pdbx_struct_sheet_hbond.range_1_label_asym_id 
_pdbx_struct_sheet_hbond.range_1_label_seq_id 
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code 
_pdbx_struct_sheet_hbond.range_1_auth_atom_id 
_pdbx_struct_sheet_hbond.range_1_auth_comp_id 
_pdbx_struct_sheet_hbond.range_1_auth_asym_id 
_pdbx_struct_sheet_hbond.range_1_auth_seq_id 
_pdbx_struct_sheet_hbond.range_2_label_atom_id 
_pdbx_struct_sheet_hbond.range_2_label_comp_id 
_pdbx_struct_sheet_hbond.range_2_label_asym_id 
_pdbx_struct_sheet_hbond.range_2_label_seq_id 
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code 
_pdbx_struct_sheet_hbond.range_2_auth_atom_id 
_pdbx_struct_sheet_hbond.range_2_auth_comp_id 
_pdbx_struct_sheet_hbond.range_2_auth_asym_id 
_pdbx_struct_sheet_hbond.range_2_auth_seq_id 
A 1 2 N LEU A 44 ? N LEU P 44 O PHE A 56 ? O PHE P 56 
A 2 3 O ALA A 55 ? O ALA P 55 N ILE A 14 ? N ILE P 14 
A 3 4 N TYR A 13 ? N TYR P 13 O GLN A 85 ? O GLN P 85 
# 
_struct_site.id                   AC1 
_struct_site.pdbx_evidence_code   Software 
_struct_site.pdbx_auth_asym_id    R 
_struct_site.pdbx_auth_comp_id    MG 
_struct_site.pdbx_auth_seq_id     1 
_struct_site.pdbx_auth_ins_code   ? 
_struct_site.pdbx_num_residues    7 
_struct_site.details              'BINDING SITE FOR RESIDUE MG R 1' 
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1 AC1 7 G   B 35 ? G   R 42  . ? 1_555 ? 
2 AC1 7 HOH F .  ? HOH R 671 . ? 1_555 ? 
3 AC1 7 HOH F .  ? HOH R 672 . ? 1_555 ? 
4 AC1 7 HOH F .  ? HOH R 673 . ? 1_555 ? 
5 AC1 7 HOH F .  ? HOH R 674 . ? 1_555 ? 
6 AC1 7 HOH F .  ? HOH R 675 . ? 1_555 ? 
7 AC1 7 HOH F .  ? HOH R 676 . ? 1_555 ? 
# 
_pdbx_validate_rmsd_bond.id                        1 
_pdbx_validate_rmsd_bond.PDB_model_num             1 
_pdbx_validate_rmsd_bond.auth_atom_id_1            P 
_pdbx_validate_rmsd_bond.auth_asym_id_1            A 
_pdbx_validate_rmsd_bond.auth_comp_id_1            G 
_pdbx_validate_rmsd_bond.auth_seq_id_1             1 
_pdbx_validate_rmsd_bond.PDB_ins_code_1            ? 
_pdbx_validate_rmsd_bond.label_alt_id_1            ? 
_pdbx_validate_rmsd_bond.auth_atom_id_2            OP3 
_pdbx_validate_rmsd_bond.auth_asym_id_2            A 
_pdbx_validate_rmsd_bond.auth_comp_id_2            G 
_pdbx_validate_rmsd_bond.auth_seq_id_2             1 
_pdbx_validate_rmsd_bond.PDB_ins_code_2            ? 
_pdbx_validate_rmsd_bond.label_alt_id_2            ? 
_pdbx_validate_rmsd_bond.bond_value                1.490 
_pdbx_validate_rmsd_bond.bond_target_value         1.607 
_pdbx_validate_rmsd_bond.bond_deviation            -0.117 
_pdbx_validate_rmsd_bond.bond_standard_deviation   0.012 
_pdbx_validate_rmsd_bond.linker_flag               N 
# 
_pdbx_validate_rmsd_angle.id                         1 
_pdbx_validate_rmsd_angle.PDB_model_num              1 
_pdbx_validate_rmsd_angle.auth_atom_id_1             OP1 
_pdbx_validate_rmsd_angle.auth_asym_id_1             A 
_pdbx_validate_rmsd_angle.auth_comp_id_1             G 
_pdbx_validate_rmsd_angle.auth_seq_id_1              1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1             ? 
_pdbx_validate_rmsd_angle.label_alt_id_1             ? 
_pdbx_validate_rmsd_angle.auth_atom_id_2             P 
_pdbx_validate_rmsd_angle.auth_asym_id_2             A 
_pdbx_validate_rmsd_angle.auth_comp_id_2             G 
_pdbx_validate_rmsd_angle.auth_seq_id_2              1 
_pdbx_validate_rmsd_angle.PDB_ins_code_2             ? 
_pdbx_validate_rmsd_angle.label_alt_id_2             ? 
_pdbx_validate_rmsd_angle.auth_atom_id_3             OP2 
_pdbx_validate_rmsd_angle.auth_asym_id_3             A 
_pdbx_validate_rmsd_angle.auth_comp_id_3             G 
_pdbx_validate_rmsd_angle.auth_seq_id_3              1 
_pdbx_validate_rmsd_angle.PDB_ins_code_3             ? 
_pdbx_validate_rmsd_angle.label_alt_id_3             ? 
_pdbx_validate_rmsd_angle.angle_value                106.13 
_pdbx_validate_rmsd_angle.angle_target_value         119.60 
_pdbx_validate_rmsd_angle.angle_deviation            -13.47 
_pdbx_validate_rmsd_angle.angle_standard_deviation   1.50 
_pdbx_validate_rmsd_angle.linker_flag                N 
# 
loop_
_pdbx_validate_torsion.id 
_pdbx_validate_torsion.PDB_model_num 
_pdbx_validate_torsion.auth_comp_id 
_pdbx_validate_torsion.auth_asym_id 
_pdbx_validate_torsion.auth_seq_id 
_pdbx_validate_torsion.PDB_ins_code 
_pdbx_validate_torsion.label_alt_id 
_pdbx_validate_torsion.phi 
_pdbx_validate_torsion.psi 
1 1 ASP P 79 ? ? 69.71  -62.38 
2 1 ASP P 90 ? ? -99.16 35.20  
3 1 ASP P 92 ? ? 97.97  151.40 
# 
_pdbx_struct_mod_residue.id               1 
_pdbx_struct_mod_residue.label_asym_id    B 
_pdbx_struct_mod_residue.label_comp_id    GTP 
_pdbx_struct_mod_residue.label_seq_id     1 
_pdbx_struct_mod_residue.auth_asym_id     R 
_pdbx_struct_mod_residue.auth_comp_id     GTP 
_pdbx_struct_mod_residue.auth_seq_id      8 
_pdbx_struct_mod_residue.PDB_ins_code     ? 
_pdbx_struct_mod_residue.parent_comp_id   G 
_pdbx_struct_mod_residue.details          "GUANOSINE-5'-TRIPHOSPHATE" 
# 
loop_
_pdbx_refine_tls.pdbx_refine_id 
_pdbx_refine_tls.id 
_pdbx_refine_tls.details 
_pdbx_refine_tls.method 
_pdbx_refine_tls.origin_x 
_pdbx_refine_tls.origin_y 
_pdbx_refine_tls.origin_z 
_pdbx_refine_tls.T[1][1] 
_pdbx_refine_tls.T[2][2] 
_pdbx_refine_tls.T[3][3] 
_pdbx_refine_tls.T[1][2] 
_pdbx_refine_tls.T[1][3] 
_pdbx_refine_tls.T[2][3] 
_pdbx_refine_tls.L[1][1] 
_pdbx_refine_tls.L[2][2] 
_pdbx_refine_tls.L[3][3] 
_pdbx_refine_tls.L[1][2] 
_pdbx_refine_tls.L[1][3] 
_pdbx_refine_tls.L[2][3] 
_pdbx_refine_tls.S[1][1] 
_pdbx_refine_tls.S[1][2] 
_pdbx_refine_tls.S[1][3] 
_pdbx_refine_tls.S[2][1] 
_pdbx_refine_tls.S[2][2] 
_pdbx_refine_tls.S[2][3] 
_pdbx_refine_tls.S[3][1] 
_pdbx_refine_tls.S[3][2] 
_pdbx_refine_tls.S[3][3] 
'X-RAY DIFFRACTION' 1 ? refined 15.4711 17.9785 0.5966  0.0968 0.5592 0.2714 -0.0012 -0.1321 -0.0148 10.5427 15.4940 6.5455 
-1.5585 0.6761  -3.8470 0.0307 1.1291 0.5104  -0.0451 -0.0614 -0.0924 -0.4005 0.6704  0.0307 
'X-RAY DIFFRACTION' 2 ? refined 13.5880 -2.8787 39.8431 0.2103 0.0859 0.1319 0.0424  0.0158  -0.0271 3.8455  2.3944  3.3925 1.1035 
-1.3541 -0.9627 0.0041 0.0744 -0.0604 -0.0660 -0.0229 0.3280  -0.1024 -0.5427 0.0188 
# 
loop_
_pdbx_refine_tls_group.pdbx_refine_id 
_pdbx_refine_tls_group.id 
_pdbx_refine_tls_group.refine_tls_id 
_pdbx_refine_tls_group.beg_auth_asym_id 
_pdbx_refine_tls_group.beg_auth_seq_id 
_pdbx_refine_tls_group.beg_label_asym_id 
_pdbx_refine_tls_group.beg_label_seq_id 
_pdbx_refine_tls_group.end_auth_asym_id 
_pdbx_refine_tls_group.end_auth_seq_id 
_pdbx_refine_tls_group.end_label_asym_id 
_pdbx_refine_tls_group.end_label_seq_id 
_pdbx_refine_tls_group.selection 
_pdbx_refine_tls_group.selection_details 
'X-RAY DIFFRACTION' 1 1 P 7 ? ? P 93 ? ? ? ? 
'X-RAY DIFFRACTION' 2 2 R 8 ? ? R 98 ? ? ? ? 
# 
loop_
_pdbx_unobs_or_zero_occ_residues.id 
_pdbx_unobs_or_zero_occ_residues.PDB_model_num 
_pdbx_unobs_or_zero_occ_residues.polymer_flag 
_pdbx_unobs_or_zero_occ_residues.occupancy_flag 
_pdbx_unobs_or_zero_occ_residues.auth_asym_id 
_pdbx_unobs_or_zero_occ_residues.auth_comp_id 
_pdbx_unobs_or_zero_occ_residues.auth_seq_id 
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code 
_pdbx_unobs_or_zero_occ_residues.label_asym_id 
_pdbx_unobs_or_zero_occ_residues.label_comp_id 
_pdbx_unobs_or_zero_occ_residues.label_seq_id 
1  1 Y 1 P MET 1  ? A MET 1  
2  1 Y 1 P ALA 2  ? A ALA 2  
3  1 Y 1 P VAL 3  ? A VAL 3  
4  1 Y 1 P PRO 4  ? A PRO 4  
5  1 Y 1 P GLU 5  ? A GLU 5  
6  1 Y 1 P THR 6  ? A THR 6  
7  1 Y 1 P ILE 94 ? A ILE 94 
8  1 Y 1 P ALA 95 ? A ALA 95 
9  1 Y 1 P LYS 96 ? A LYS 96 
10 1 Y 1 P MET 97 ? A MET 97 
11 1 Y 1 P LYS 98 ? A LYS 98 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
A   OP3    O  N N 1   
A   P      P  N N 2   
A   OP1    O  N N 3   
A   OP2    O  N N 4   
A   "O5'"  O  N N 5   
A   "C5'"  C  N N 6   
A   "C4'"  C  N R 7   
A   "O4'"  O  N N 8   
A   "C3'"  C  N S 9   
A   "O3'"  O  N N 10  
A   "C2'"  C  N R 11  
A   "O2'"  O  N N 12  
A   "C1'"  C  N R 13  
A   N9     N  Y N 14  
A   C8     C  Y N 15  
A   N7     N  Y N 16  
A   C5     C  Y N 17  
A   C6     C  Y N 18  
A   N6     N  N N 19  
A   N1     N  Y N 20  
A   C2     C  Y N 21  
A   N3     N  Y N 22  
A   C4     C  Y N 23  
A   HOP3   H  N N 24  
A   HOP2   H  N N 25  
A   "H5'"  H  N N 26  
A   "H5''" H  N N 27  
A   "H4'"  H  N N 28  
A   "H3'"  H  N N 29  
A   "HO3'" H  N N 30  
A   "H2'"  H  N N 31  
A   "HO2'" H  N N 32  
A   "H1'"  H  N N 33  
A   H8     H  N N 34  
A   H61    H  N N 35  
A   H62    H  N N 36  
A   H2     H  N N 37  
ALA N      N  N N 38  
ALA CA     C  N S 39  
ALA C      C  N N 40  
ALA O      O  N N 41  
ALA CB     C  N N 42  
ALA OXT    O  N N 43  
ALA H      H  N N 44  
ALA H2     H  N N 45  
ALA HA     H  N N 46  
ALA HB1    H  N N 47  
ALA HB2    H  N N 48  
ALA HB3    H  N N 49  
ALA HXT    H  N N 50  
ARG N      N  N N 51  
ARG CA     C  N S 52  
ARG C      C  N N 53  
ARG O      O  N N 54  
ARG CB     C  N N 55  
ARG CG     C  N N 56  
ARG CD     C  N N 57  
ARG NE     N  N N 58  
ARG CZ     C  N N 59  
ARG NH1    N  N N 60  
ARG NH2    N  N N 61  
ARG OXT    O  N N 62  
ARG H      H  N N 63  
ARG H2     H  N N 64  
ARG HA     H  N N 65  
ARG HB2    H  N N 66  
ARG HB3    H  N N 67  
ARG HG2    H  N N 68  
ARG HG3    H  N N 69  
ARG HD2    H  N N 70  
ARG HD3    H  N N 71  
ARG HE     H  N N 72  
ARG HH11   H  N N 73  
ARG HH12   H  N N 74  
ARG HH21   H  N N 75  
ARG HH22   H  N N 76  
ARG HXT    H  N N 77  
ASN N      N  N N 78  
ASN CA     C  N S 79  
ASN C      C  N N 80  
ASN O      O  N N 81  
ASN CB     C  N N 82  
ASN CG     C  N N 83  
ASN OD1    O  N N 84  
ASN ND2    N  N N 85  
ASN OXT    O  N N 86  
ASN H      H  N N 87  
ASN H2     H  N N 88  
ASN HA     H  N N 89  
ASN HB2    H  N N 90  
ASN HB3    H  N N 91  
ASN HD21   H  N N 92  
ASN HD22   H  N N 93  
ASN HXT    H  N N 94  
ASP N      N  N N 95  
ASP CA     C  N S 96  
ASP C      C  N N 97  
ASP O      O  N N 98  
ASP CB     C  N N 99  
ASP CG     C  N N 100 
ASP OD1    O  N N 101 
ASP OD2    O  N N 102 
ASP OXT    O  N N 103 
ASP H      H  N N 104 
ASP H2     H  N N 105 
ASP HA     H  N N 106 
ASP HB2    H  N N 107 
ASP HB3    H  N N 108 
ASP HD2    H  N N 109 
ASP HXT    H  N N 110 
C   OP3    O  N N 111 
C   P      P  N N 112 
C   OP1    O  N N 113 
C   OP2    O  N N 114 
C   "O5'"  O  N N 115 
C   "C5'"  C  N N 116 
C   "C4'"  C  N R 117 
C   "O4'"  O  N N 118 
C   "C3'"  C  N S 119 
C   "O3'"  O  N N 120 
C   "C2'"  C  N R 121 
C   "O2'"  O  N N 122 
C   "C1'"  C  N R 123 
C   N1     N  N N 124 
C   C2     C  N N 125 
C   O2     O  N N 126 
C   N3     N  N N 127 
C   C4     C  N N 128 
C   N4     N  N N 129 
C   C5     C  N N 130 
C   C6     C  N N 131 
C   HOP3   H  N N 132 
C   HOP2   H  N N 133 
C   "H5'"  H  N N 134 
C   "H5''" H  N N 135 
C   "H4'"  H  N N 136 
C   "H3'"  H  N N 137 
C   "HO3'" H  N N 138 
C   "H2'"  H  N N 139 
C   "HO2'" H  N N 140 
C   "H1'"  H  N N 141 
C   H41    H  N N 142 
C   H42    H  N N 143 
C   H5     H  N N 144 
C   H6     H  N N 145 
G   OP3    O  N N 146 
G   P      P  N N 147 
G   OP1    O  N N 148 
G   OP2    O  N N 149 
G   "O5'"  O  N N 150 
G   "C5'"  C  N N 151 
G   "C4'"  C  N R 152 
G   "O4'"  O  N N 153 
G   "C3'"  C  N S 154 
G   "O3'"  O  N N 155 
G   "C2'"  C  N R 156 
G   "O2'"  O  N N 157 
G   "C1'"  C  N R 158 
G   N9     N  Y N 159 
G   C8     C  Y N 160 
G   N7     N  Y N 161 
G   C5     C  Y N 162 
G   C6     C  N N 163 
G   O6     O  N N 164 
G   N1     N  N N 165 
G   C2     C  N N 166 
G   N2     N  N N 167 
G   N3     N  N N 168 
G   C4     C  Y N 169 
G   HOP3   H  N N 170 
G   HOP2   H  N N 171 
G   "H5'"  H  N N 172 
G   "H5''" H  N N 173 
G   "H4'"  H  N N 174 
G   "H3'"  H  N N 175 
G   "HO3'" H  N N 176 
G   "H2'"  H  N N 177 
G   "HO2'" H  N N 178 
G   "H1'"  H  N N 179 
G   H8     H  N N 180 
G   H1     H  N N 181 
G   H21    H  N N 182 
G   H22    H  N N 183 
GLN N      N  N N 184 
GLN CA     C  N S 185 
GLN C      C  N N 186 
GLN O      O  N N 187 
GLN CB     C  N N 188 
GLN CG     C  N N 189 
GLN CD     C  N N 190 
GLN OE1    O  N N 191 
GLN NE2    N  N N 192 
GLN OXT    O  N N 193 
GLN H      H  N N 194 
GLN H2     H  N N 195 
GLN HA     H  N N 196 
GLN HB2    H  N N 197 
GLN HB3    H  N N 198 
GLN HG2    H  N N 199 
GLN HG3    H  N N 200 
GLN HE21   H  N N 201 
GLN HE22   H  N N 202 
GLN HXT    H  N N 203 
GLU N      N  N N 204 
GLU CA     C  N S 205 
GLU C      C  N N 206 
GLU O      O  N N 207 
GLU CB     C  N N 208 
GLU CG     C  N N 209 
GLU CD     C  N N 210 
GLU OE1    O  N N 211 
GLU OE2    O  N N 212 
GLU OXT    O  N N 213 
GLU H      H  N N 214 
GLU H2     H  N N 215 
GLU HA     H  N N 216 
GLU HB2    H  N N 217 
GLU HB3    H  N N 218 
GLU HG2    H  N N 219 
GLU HG3    H  N N 220 
GLU HE2    H  N N 221 
GLU HXT    H  N N 222 
GLY N      N  N N 223 
GLY CA     C  N N 224 
GLY C      C  N N 225 
GLY O      O  N N 226 
GLY OXT    O  N N 227 
GLY H      H  N N 228 
GLY H2     H  N N 229 
GLY HA2    H  N N 230 
GLY HA3    H  N N 231 
GLY HXT    H  N N 232 
GTP PG     P  N N 233 
GTP O1G    O  N N 234 
GTP O2G    O  N N 235 
GTP O3G    O  N N 236 
GTP O3B    O  N N 237 
GTP PB     P  N N 238 
GTP O1B    O  N N 239 
GTP O2B    O  N N 240 
GTP O3A    O  N N 241 
GTP PA     P  N N 242 
GTP O1A    O  N N 243 
GTP O2A    O  N N 244 
GTP "O5'"  O  N N 245 
GTP "C5'"  C  N N 246 
GTP "C4'"  C  N R 247 
GTP "O4'"  O  N N 248 
GTP "C3'"  C  N S 249 
GTP "O3'"  O  N N 250 
GTP "C2'"  C  N R 251 
GTP "O2'"  O  N N 252 
GTP "C1'"  C  N R 253 
GTP N9     N  Y N 254 
GTP C8     C  Y N 255 
GTP N7     N  Y N 256 
GTP C5     C  Y N 257 
GTP C6     C  N N 258 
GTP O6     O  N N 259 
GTP N1     N  N N 260 
GTP C2     C  N N 261 
GTP N2     N  N N 262 
GTP N3     N  N N 263 
GTP C4     C  Y N 264 
GTP HOG2   H  N N 265 
GTP HOG3   H  N N 266 
GTP HOB2   H  N N 267 
GTP HOA2   H  N N 268 
GTP "H5'"  H  N N 269 
GTP "H5''" H  N N 270 
GTP "H4'"  H  N N 271 
GTP "H3'"  H  N N 272 
GTP "HO3'" H  N N 273 
GTP "H2'"  H  N N 274 
GTP "HO2'" H  N N 275 
GTP "H1'"  H  N N 276 
GTP H8     H  N N 277 
GTP HN1    H  N N 278 
GTP HN21   H  N N 279 
GTP HN22   H  N N 280 
HIS N      N  N N 281 
HIS CA     C  N S 282 
HIS C      C  N N 283 
HIS O      O  N N 284 
HIS CB     C  N N 285 
HIS CG     C  Y N 286 
HIS ND1    N  Y N 287 
HIS CD2    C  Y N 288 
HIS CE1    C  Y N 289 
HIS NE2    N  Y N 290 
HIS OXT    O  N N 291 
HIS H      H  N N 292 
HIS H2     H  N N 293 
HIS HA     H  N N 294 
HIS HB2    H  N N 295 
HIS HB3    H  N N 296 
HIS HD1    H  N N 297 
HIS HD2    H  N N 298 
HIS HE1    H  N N 299 
HIS HE2    H  N N 300 
HIS HXT    H  N N 301 
HOH O      O  N N 302 
HOH H1     H  N N 303 
HOH H2     H  N N 304 
ILE N      N  N N 305 
ILE CA     C  N S 306 
ILE C      C  N N 307 
ILE O      O  N N 308 
ILE CB     C  N S 309 
ILE CG1    C  N N 310 
ILE CG2    C  N N 311 
ILE CD1    C  N N 312 
ILE OXT    O  N N 313 
ILE H      H  N N 314 
ILE H2     H  N N 315 
ILE HA     H  N N 316 
ILE HB     H  N N 317 
ILE HG12   H  N N 318 
ILE HG13   H  N N 319 
ILE HG21   H  N N 320 
ILE HG22   H  N N 321 
ILE HG23   H  N N 322 
ILE HD11   H  N N 323 
ILE HD12   H  N N 324 
ILE HD13   H  N N 325 
ILE HXT    H  N N 326 
LEU N      N  N N 327 
LEU CA     C  N S 328 
LEU C      C  N N 329 
LEU O      O  N N 330 
LEU CB     C  N N 331 
LEU CG     C  N N 332 
LEU CD1    C  N N 333 
LEU CD2    C  N N 334 
LEU OXT    O  N N 335 
LEU H      H  N N 336 
LEU H2     H  N N 337 
LEU HA     H  N N 338 
LEU HB2    H  N N 339 
LEU HB3    H  N N 340 
LEU HG     H  N N 341 
LEU HD11   H  N N 342 
LEU HD12   H  N N 343 
LEU HD13   H  N N 344 
LEU HD21   H  N N 345 
LEU HD22   H  N N 346 
LEU HD23   H  N N 347 
LEU HXT    H  N N 348 
LYS N      N  N N 349 
LYS CA     C  N S 350 
LYS C      C  N N 351 
LYS O      O  N N 352 
LYS CB     C  N N 353 
LYS CG     C  N N 354 
LYS CD     C  N N 355 
LYS CE     C  N N 356 
LYS NZ     N  N N 357 
LYS OXT    O  N N 358 
LYS H      H  N N 359 
LYS H2     H  N N 360 
LYS HA     H  N N 361 
LYS HB2    H  N N 362 
LYS HB3    H  N N 363 
LYS HG2    H  N N 364 
LYS HG3    H  N N 365 
LYS HD2    H  N N 366 
LYS HD3    H  N N 367 
LYS HE2    H  N N 368 
LYS HE3    H  N N 369 
LYS HZ1    H  N N 370 
LYS HZ2    H  N N 371 
LYS HZ3    H  N N 372 
LYS HXT    H  N N 373 
MET N      N  N N 374 
MET CA     C  N S 375 
MET C      C  N N 376 
MET O      O  N N 377 
MET CB     C  N N 378 
MET CG     C  N N 379 
MET SD     S  N N 380 
MET CE     C  N N 381 
MET OXT    O  N N 382 
MET H      H  N N 383 
MET H2     H  N N 384 
MET HA     H  N N 385 
MET HB2    H  N N 386 
MET HB3    H  N N 387 
MET HG2    H  N N 388 
MET HG3    H  N N 389 
MET HE1    H  N N 390 
MET HE2    H  N N 391 
MET HE3    H  N N 392 
MET HXT    H  N N 393 
MG  MG     MG N N 394 
PHE N      N  N N 395 
PHE CA     C  N S 396 
PHE C      C  N N 397 
PHE O      O  N N 398 
PHE CB     C  N N 399 
PHE CG     C  Y N 400 
PHE CD1    C  Y N 401 
PHE CD2    C  Y N 402 
PHE CE1    C  Y N 403 
PHE CE2    C  Y N 404 
PHE CZ     C  Y N 405 
PHE OXT    O  N N 406 
PHE H      H  N N 407 
PHE H2     H  N N 408 
PHE HA     H  N N 409 
PHE HB2    H  N N 410 
PHE HB3    H  N N 411 
PHE HD1    H  N N 412 
PHE HD2    H  N N 413 
PHE HE1    H  N N 414 
PHE HE2    H  N N 415 
PHE HZ     H  N N 416 
PHE HXT    H  N N 417 
PRO N      N  N N 418 
PRO CA     C  N S 419 
PRO C      C  N N 420 
PRO O      O  N N 421 
PRO CB     C  N N 422 
PRO CG     C  N N 423 
PRO CD     C  N N 424 
PRO OXT    O  N N 425 
PRO H      H  N N 426 
PRO HA     H  N N 427 
PRO HB2    H  N N 428 
PRO HB3    H  N N 429 
PRO HG2    H  N N 430 
PRO HG3    H  N N 431 
PRO HD2    H  N N 432 
PRO HD3    H  N N 433 
PRO HXT    H  N N 434 
SER N      N  N N 435 
SER CA     C  N S 436 
SER C      C  N N 437 
SER O      O  N N 438 
SER CB     C  N N 439 
SER OG     O  N N 440 
SER OXT    O  N N 441 
SER H      H  N N 442 
SER H2     H  N N 443 
SER HA     H  N N 444 
SER HB2    H  N N 445 
SER HB3    H  N N 446 
SER HG     H  N N 447 
SER HXT    H  N N 448 
THR N      N  N N 449 
THR CA     C  N S 450 
THR C      C  N N 451 
THR O      O  N N 452 
THR CB     C  N R 453 
THR OG1    O  N N 454 
THR CG2    C  N N 455 
THR OXT    O  N N 456 
THR H      H  N N 457 
THR H2     H  N N 458 
THR HA     H  N N 459 
THR HB     H  N N 460 
THR HG1    H  N N 461 
THR HG21   H  N N 462 
THR HG22   H  N N 463 
THR HG23   H  N N 464 
THR HXT    H  N N 465 
TYR N      N  N N 466 
TYR CA     C  N S 467 
TYR C      C  N N 468 
TYR O      O  N N 469 
TYR CB     C  N N 470 
TYR CG     C  Y N 471 
TYR CD1    C  Y N 472 
TYR CD2    C  Y N 473 
TYR CE1    C  Y N 474 
TYR CE2    C  Y N 475 
TYR CZ     C  Y N 476 
TYR OH     O  N N 477 
TYR OXT    O  N N 478 
TYR H      H  N N 479 
TYR H2     H  N N 480 
TYR HA     H  N N 481 
TYR HB2    H  N N 482 
TYR HB3    H  N N 483 
TYR HD1    H  N N 484 
TYR HD2    H  N N 485 
TYR HE1    H  N N 486 
TYR HE2    H  N N 487 
TYR HH     H  N N 488 
TYR HXT    H  N N 489 
U   OP3    O  N N 490 
U   P      P  N N 491 
U   OP1    O  N N 492 
U   OP2    O  N N 493 
U   "O5'"  O  N N 494 
U   "C5'"  C  N N 495 
U   "C4'"  C  N R 496 
U   "O4'"  O  N N 497 
U   "C3'"  C  N S 498 
U   "O3'"  O  N N 499 
U   "C2'"  C  N R 500 
U   "O2'"  O  N N 501 
U   "C1'"  C  N R 502 
U   N1     N  N N 503 
U   C2     C  N N 504 
U   O2     O  N N 505 
U   N3     N  N N 506 
U   C4     C  N N 507 
U   O4     O  N N 508 
U   C5     C  N N 509 
U   C6     C  N N 510 
U   HOP3   H  N N 511 
U   HOP2   H  N N 512 
U   "H5'"  H  N N 513 
U   "H5''" H  N N 514 
U   "H4'"  H  N N 515 
U   "H3'"  H  N N 516 
U   "HO3'" H  N N 517 
U   "H2'"  H  N N 518 
U   "HO2'" H  N N 519 
U   "H1'"  H  N N 520 
U   H3     H  N N 521 
U   H5     H  N N 522 
U   H6     H  N N 523 
VAL N      N  N N 524 
VAL CA     C  N S 525 
VAL C      C  N N 526 
VAL O      O  N N 527 
VAL CB     C  N N 528 
VAL CG1    C  N N 529 
VAL CG2    C  N N 530 
VAL OXT    O  N N 531 
VAL H      H  N N 532 
VAL H2     H  N N 533 
VAL HA     H  N N 534 
VAL HB     H  N N 535 
VAL HG11   H  N N 536 
VAL HG12   H  N N 537 
VAL HG13   H  N N 538 
VAL HG21   H  N N 539 
VAL HG22   H  N N 540 
VAL HG23   H  N N 541 
VAL HXT    H  N N 542 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A   OP3   P      sing N N 1   
A   OP3   HOP3   sing N N 2   
A   P     OP1    doub N N 3   
A   P     OP2    sing N N 4   
A   P     "O5'"  sing N N 5   
A   OP2   HOP2   sing N N 6   
A   "O5'" "C5'"  sing N N 7   
A   "C5'" "C4'"  sing N N 8   
A   "C5'" "H5'"  sing N N 9   
A   "C5'" "H5''" sing N N 10  
A   "C4'" "O4'"  sing N N 11  
A   "C4'" "C3'"  sing N N 12  
A   "C4'" "H4'"  sing N N 13  
A   "O4'" "C1'"  sing N N 14  
A   "C3'" "O3'"  sing N N 15  
A   "C3'" "C2'"  sing N N 16  
A   "C3'" "H3'"  sing N N 17  
A   "O3'" "HO3'" sing N N 18  
A   "C2'" "O2'"  sing N N 19  
A   "C2'" "C1'"  sing N N 20  
A   "C2'" "H2'"  sing N N 21  
A   "O2'" "HO2'" sing N N 22  
A   "C1'" N9     sing N N 23  
A   "C1'" "H1'"  sing N N 24  
A   N9    C8     sing Y N 25  
A   N9    C4     sing Y N 26  
A   C8    N7     doub Y N 27  
A   C8    H8     sing N N 28  
A   N7    C5     sing Y N 29  
A   C5    C6     sing Y N 30  
A   C5    C4     doub Y N 31  
A   C6    N6     sing N N 32  
A   C6    N1     doub Y N 33  
A   N6    H61    sing N N 34  
A   N6    H62    sing N N 35  
A   N1    C2     sing Y N 36  
A   C2    N3     doub Y N 37  
A   C2    H2     sing N N 38  
A   N3    C4     sing Y N 39  
ALA N     CA     sing N N 40  
ALA N     H      sing N N 41  
ALA N     H2     sing N N 42  
ALA CA    C      sing N N 43  
ALA CA    CB     sing N N 44  
ALA CA    HA     sing N N 45  
ALA C     O      doub N N 46  
ALA C     OXT    sing N N 47  
ALA CB    HB1    sing N N 48  
ALA CB    HB2    sing N N 49  
ALA CB    HB3    sing N N 50  
ALA OXT   HXT    sing N N 51  
ARG N     CA     sing N N 52  
ARG N     H      sing N N 53  
ARG N     H2     sing N N 54  
ARG CA    C      sing N N 55  
ARG CA    CB     sing N N 56  
ARG CA    HA     sing N N 57  
ARG C     O      doub N N 58  
ARG C     OXT    sing N N 59  
ARG CB    CG     sing N N 60  
ARG CB    HB2    sing N N 61  
ARG CB    HB3    sing N N 62  
ARG CG    CD     sing N N 63  
ARG CG    HG2    sing N N 64  
ARG CG    HG3    sing N N 65  
ARG CD    NE     sing N N 66  
ARG CD    HD2    sing N N 67  
ARG CD    HD3    sing N N 68  
ARG NE    CZ     sing N N 69  
ARG NE    HE     sing N N 70  
ARG CZ    NH1    sing N N 71  
ARG CZ    NH2    doub N N 72  
ARG NH1   HH11   sing N N 73  
ARG NH1   HH12   sing N N 74  
ARG NH2   HH21   sing N N 75  
ARG NH2   HH22   sing N N 76  
ARG OXT   HXT    sing N N 77  
ASN N     CA     sing N N 78  
ASN N     H      sing N N 79  
ASN N     H2     sing N N 80  
ASN CA    C      sing N N 81  
ASN CA    CB     sing N N 82  
ASN CA    HA     sing N N 83  
ASN C     O      doub N N 84  
ASN C     OXT    sing N N 85  
ASN CB    CG     sing N N 86  
ASN CB    HB2    sing N N 87  
ASN CB    HB3    sing N N 88  
ASN CG    OD1    doub N N 89  
ASN CG    ND2    sing N N 90  
ASN ND2   HD21   sing N N 91  
ASN ND2   HD22   sing N N 92  
ASN OXT   HXT    sing N N 93  
ASP N     CA     sing N N 94  
ASP N     H      sing N N 95  
ASP N     H2     sing N N 96  
ASP CA    C      sing N N 97  
ASP CA    CB     sing N N 98  
ASP CA    HA     sing N N 99  
ASP C     O      doub N N 100 
ASP C     OXT    sing N N 101 
ASP CB    CG     sing N N 102 
ASP CB    HB2    sing N N 103 
ASP CB    HB3    sing N N 104 
ASP CG    OD1    doub N N 105 
ASP CG    OD2    sing N N 106 
ASP OD2   HD2    sing N N 107 
ASP OXT   HXT    sing N N 108 
C   OP3   P      sing N N 109 
C   OP3   HOP3   sing N N 110 
C   P     OP1    doub N N 111 
C   P     OP2    sing N N 112 
C   P     "O5'"  sing N N 113 
C   OP2   HOP2   sing N N 114 
C   "O5'" "C5'"  sing N N 115 
C   "C5'" "C4'"  sing N N 116 
C   "C5'" "H5'"  sing N N 117 
C   "C5'" "H5''" sing N N 118 
C   "C4'" "O4'"  sing N N 119 
C   "C4'" "C3'"  sing N N 120 
C   "C4'" "H4'"  sing N N 121 
C   "O4'" "C1'"  sing N N 122 
C   "C3'" "O3'"  sing N N 123 
C   "C3'" "C2'"  sing N N 124 
C   "C3'" "H3'"  sing N N 125 
C   "O3'" "HO3'" sing N N 126 
C   "C2'" "O2'"  sing N N 127 
C   "C2'" "C1'"  sing N N 128 
C   "C2'" "H2'"  sing N N 129 
C   "O2'" "HO2'" sing N N 130 
C   "C1'" N1     sing N N 131 
C   "C1'" "H1'"  sing N N 132 
C   N1    C2     sing N N 133 
C   N1    C6     sing N N 134 
C   C2    O2     doub N N 135 
C   C2    N3     sing N N 136 
C   N3    C4     doub N N 137 
C   C4    N4     sing N N 138 
C   C4    C5     sing N N 139 
C   N4    H41    sing N N 140 
C   N4    H42    sing N N 141 
C   C5    C6     doub N N 142 
C   C5    H5     sing N N 143 
C   C6    H6     sing N N 144 
G   OP3   P      sing N N 145 
G   OP3   HOP3   sing N N 146 
G   P     OP1    doub N N 147 
G   P     OP2    sing N N 148 
G   P     "O5'"  sing N N 149 
G   OP2   HOP2   sing N N 150 
G   "O5'" "C5'"  sing N N 151 
G   "C5'" "C4'"  sing N N 152 
G   "C5'" "H5'"  sing N N 153 
G   "C5'" "H5''" sing N N 154 
G   "C4'" "O4'"  sing N N 155 
G   "C4'" "C3'"  sing N N 156 
G   "C4'" "H4'"  sing N N 157 
G   "O4'" "C1'"  sing N N 158 
G   "C3'" "O3'"  sing N N 159 
G   "C3'" "C2'"  sing N N 160 
G   "C3'" "H3'"  sing N N 161 
G   "O3'" "HO3'" sing N N 162 
G   "C2'" "O2'"  sing N N 163 
G   "C2'" "C1'"  sing N N 164 
G   "C2'" "H2'"  sing N N 165 
G   "O2'" "HO2'" sing N N 166 
G   "C1'" N9     sing N N 167 
G   "C1'" "H1'"  sing N N 168 
G   N9    C8     sing Y N 169 
G   N9    C4     sing Y N 170 
G   C8    N7     doub Y N 171 
G   C8    H8     sing N N 172 
G   N7    C5     sing Y N 173 
G   C5    C6     sing N N 174 
G   C5    C4     doub Y N 175 
G   C6    O6     doub N N 176 
G   C6    N1     sing N N 177 
G   N1    C2     sing N N 178 
G   N1    H1     sing N N 179 
G   C2    N2     sing N N 180 
G   C2    N3     doub N N 181 
G   N2    H21    sing N N 182 
G   N2    H22    sing N N 183 
G   N3    C4     sing N N 184 
GLN N     CA     sing N N 185 
GLN N     H      sing N N 186 
GLN N     H2     sing N N 187 
GLN CA    C      sing N N 188 
GLN CA    CB     sing N N 189 
GLN CA    HA     sing N N 190 
GLN C     O      doub N N 191 
GLN C     OXT    sing N N 192 
GLN CB    CG     sing N N 193 
GLN CB    HB2    sing N N 194 
GLN CB    HB3    sing N N 195 
GLN CG    CD     sing N N 196 
GLN CG    HG2    sing N N 197 
GLN CG    HG3    sing N N 198 
GLN CD    OE1    doub N N 199 
GLN CD    NE2    sing N N 200 
GLN NE2   HE21   sing N N 201 
GLN NE2   HE22   sing N N 202 
GLN OXT   HXT    sing N N 203 
GLU N     CA     sing N N 204 
GLU N     H      sing N N 205 
GLU N     H2     sing N N 206 
GLU CA    C      sing N N 207 
GLU CA    CB     sing N N 208 
GLU CA    HA     sing N N 209 
GLU C     O      doub N N 210 
GLU C     OXT    sing N N 211 
GLU CB    CG     sing N N 212 
GLU CB    HB2    sing N N 213 
GLU CB    HB3    sing N N 214 
GLU CG    CD     sing N N 215 
GLU CG    HG2    sing N N 216 
GLU CG    HG3    sing N N 217 
GLU CD    OE1    doub N N 218 
GLU CD    OE2    sing N N 219 
GLU OE2   HE2    sing N N 220 
GLU OXT   HXT    sing N N 221 
GLY N     CA     sing N N 222 
GLY N     H      sing N N 223 
GLY N     H2     sing N N 224 
GLY CA    C      sing N N 225 
GLY CA    HA2    sing N N 226 
GLY CA    HA3    sing N N 227 
GLY C     O      doub N N 228 
GLY C     OXT    sing N N 229 
GLY OXT   HXT    sing N N 230 
GTP PG    O1G    doub N N 231 
GTP PG    O2G    sing N N 232 
GTP PG    O3G    sing N N 233 
GTP PG    O3B    sing N N 234 
GTP O2G   HOG2   sing N N 235 
GTP O3G   HOG3   sing N N 236 
GTP O3B   PB     sing N N 237 
GTP PB    O1B    doub N N 238 
GTP PB    O2B    sing N N 239 
GTP PB    O3A    sing N N 240 
GTP O2B   HOB2   sing N N 241 
GTP O3A   PA     sing N N 242 
GTP PA    O1A    doub N N 243 
GTP PA    O2A    sing N N 244 
GTP PA    "O5'"  sing N N 245 
GTP O2A   HOA2   sing N N 246 
GTP "O5'" "C5'"  sing N N 247 
GTP "C5'" "C4'"  sing N N 248 
GTP "C5'" "H5'"  sing N N 249 
GTP "C5'" "H5''" sing N N 250 
GTP "C4'" "O4'"  sing N N 251 
GTP "C4'" "C3'"  sing N N 252 
GTP "C4'" "H4'"  sing N N 253 
GTP "O4'" "C1'"  sing N N 254 
GTP "C3'" "O3'"  sing N N 255 
GTP "C3'" "C2'"  sing N N 256 
GTP "C3'" "H3'"  sing N N 257 
GTP "O3'" "HO3'" sing N N 258 
GTP "C2'" "O2'"  sing N N 259 
GTP "C2'" "C1'"  sing N N 260 
GTP "C2'" "H2'"  sing N N 261 
GTP "O2'" "HO2'" sing N N 262 
GTP "C1'" N9     sing N N 263 
GTP "C1'" "H1'"  sing N N 264 
GTP N9    C8     sing Y N 265 
GTP N9    C4     sing Y N 266 
GTP C8    N7     doub Y N 267 
GTP C8    H8     sing N N 268 
GTP N7    C5     sing Y N 269 
GTP C5    C6     sing N N 270 
GTP C5    C4     doub Y N 271 
GTP C6    O6     doub N N 272 
GTP C6    N1     sing N N 273 
GTP N1    C2     sing N N 274 
GTP N1    HN1    sing N N 275 
GTP C2    N2     sing N N 276 
GTP C2    N3     doub N N 277 
GTP N2    HN21   sing N N 278 
GTP N2    HN22   sing N N 279 
GTP N3    C4     sing N N 280 
HIS N     CA     sing N N 281 
HIS N     H      sing N N 282 
HIS N     H2     sing N N 283 
HIS CA    C      sing N N 284 
HIS CA    CB     sing N N 285 
HIS CA    HA     sing N N 286 
HIS C     O      doub N N 287 
HIS C     OXT    sing N N 288 
HIS CB    CG     sing N N 289 
HIS CB    HB2    sing N N 290 
HIS CB    HB3    sing N N 291 
HIS CG    ND1    sing Y N 292 
HIS CG    CD2    doub Y N 293 
HIS ND1   CE1    doub Y N 294 
HIS ND1   HD1    sing N N 295 
HIS CD2   NE2    sing Y N 296 
HIS CD2   HD2    sing N N 297 
HIS CE1   NE2    sing Y N 298 
HIS CE1   HE1    sing N N 299 
HIS NE2   HE2    sing N N 300 
HIS OXT   HXT    sing N N 301 
HOH O     H1     sing N N 302 
HOH O     H2     sing N N 303 
ILE N     CA     sing N N 304 
ILE N     H      sing N N 305 
ILE N     H2     sing N N 306 
ILE CA    C      sing N N 307 
ILE CA    CB     sing N N 308 
ILE CA    HA     sing N N 309 
ILE C     O      doub N N 310 
ILE C     OXT    sing N N 311 
ILE CB    CG1    sing N N 312 
ILE CB    CG2    sing N N 313 
ILE CB    HB     sing N N 314 
ILE CG1   CD1    sing N N 315 
ILE CG1   HG12   sing N N 316 
ILE CG1   HG13   sing N N 317 
ILE CG2   HG21   sing N N 318 
ILE CG2   HG22   sing N N 319 
ILE CG2   HG23   sing N N 320 
ILE CD1   HD11   sing N N 321 
ILE CD1   HD12   sing N N 322 
ILE CD1   HD13   sing N N 323 
ILE OXT   HXT    sing N N 324 
LEU N     CA     sing N N 325 
LEU N     H      sing N N 326 
LEU N     H2     sing N N 327 
LEU CA    C      sing N N 328 
LEU CA    CB     sing N N 329 
LEU CA    HA     sing N N 330 
LEU C     O      doub N N 331 
LEU C     OXT    sing N N 332 
LEU CB    CG     sing N N 333 
LEU CB    HB2    sing N N 334 
LEU CB    HB3    sing N N 335 
LEU CG    CD1    sing N N 336 
LEU CG    CD2    sing N N 337 
LEU CG    HG     sing N N 338 
LEU CD1   HD11   sing N N 339 
LEU CD1   HD12   sing N N 340 
LEU CD1   HD13   sing N N 341 
LEU CD2   HD21   sing N N 342 
LEU CD2   HD22   sing N N 343 
LEU CD2   HD23   sing N N 344 
LEU OXT   HXT    sing N N 345 
LYS N     CA     sing N N 346 
LYS N     H      sing N N 347 
LYS N     H2     sing N N 348 
LYS CA    C      sing N N 349 
LYS CA    CB     sing N N 350 
LYS CA    HA     sing N N 351 
LYS C     O      doub N N 352 
LYS C     OXT    sing N N 353 
LYS CB    CG     sing N N 354 
LYS CB    HB2    sing N N 355 
LYS CB    HB3    sing N N 356 
LYS CG    CD     sing N N 357 
LYS CG    HG2    sing N N 358 
LYS CG    HG3    sing N N 359 
LYS CD    CE     sing N N 360 
LYS CD    HD2    sing N N 361 
LYS CD    HD3    sing N N 362 
LYS CE    NZ     sing N N 363 
LYS CE    HE2    sing N N 364 
LYS CE    HE3    sing N N 365 
LYS NZ    HZ1    sing N N 366 
LYS NZ    HZ2    sing N N 367 
LYS NZ    HZ3    sing N N 368 
LYS OXT   HXT    sing N N 369 
MET N     CA     sing N N 370 
MET N     H      sing N N 371 
MET N     H2     sing N N 372 
MET CA    C      sing N N 373 
MET CA    CB     sing N N 374 
MET CA    HA     sing N N 375 
MET C     O      doub N N 376 
MET C     OXT    sing N N 377 
MET CB    CG     sing N N 378 
MET CB    HB2    sing N N 379 
MET CB    HB3    sing N N 380 
MET CG    SD     sing N N 381 
MET CG    HG2    sing N N 382 
MET CG    HG3    sing N N 383 
MET SD    CE     sing N N 384 
MET CE    HE1    sing N N 385 
MET CE    HE2    sing N N 386 
MET CE    HE3    sing N N 387 
MET OXT   HXT    sing N N 388 
PHE N     CA     sing N N 389 
PHE N     H      sing N N 390 
PHE N     H2     sing N N 391 
PHE CA    C      sing N N 392 
PHE CA    CB     sing N N 393 
PHE CA    HA     sing N N 394 
PHE C     O      doub N N 395 
PHE C     OXT    sing N N 396 
PHE CB    CG     sing N N 397 
PHE CB    HB2    sing N N 398 
PHE CB    HB3    sing N N 399 
PHE CG    CD1    doub Y N 400 
PHE CG    CD2    sing Y N 401 
PHE CD1   CE1    sing Y N 402 
PHE CD1   HD1    sing N N 403 
PHE CD2   CE2    doub Y N 404 
PHE CD2   HD2    sing N N 405 
PHE CE1   CZ     doub Y N 406 
PHE CE1   HE1    sing N N 407 
PHE CE2   CZ     sing Y N 408 
PHE CE2   HE2    sing N N 409 
PHE CZ    HZ     sing N N 410 
PHE OXT   HXT    sing N N 411 
PRO N     CA     sing N N 412 
PRO N     CD     sing N N 413 
PRO N     H      sing N N 414 
PRO CA    C      sing N N 415 
PRO CA    CB     sing N N 416 
PRO CA    HA     sing N N 417 
PRO C     O      doub N N 418 
PRO C     OXT    sing N N 419 
PRO CB    CG     sing N N 420 
PRO CB    HB2    sing N N 421 
PRO CB    HB3    sing N N 422 
PRO CG    CD     sing N N 423 
PRO CG    HG2    sing N N 424 
PRO CG    HG3    sing N N 425 
PRO CD    HD2    sing N N 426 
PRO CD    HD3    sing N N 427 
PRO OXT   HXT    sing N N 428 
SER N     CA     sing N N 429 
SER N     H      sing N N 430 
SER N     H2     sing N N 431 
SER CA    C      sing N N 432 
SER CA    CB     sing N N 433 
SER CA    HA     sing N N 434 
SER C     O      doub N N 435 
SER C     OXT    sing N N 436 
SER CB    OG     sing N N 437 
SER CB    HB2    sing N N 438 
SER CB    HB3    sing N N 439 
SER OG    HG     sing N N 440 
SER OXT   HXT    sing N N 441 
THR N     CA     sing N N 442 
THR N     H      sing N N 443 
THR N     H2     sing N N 444 
THR CA    C      sing N N 445 
THR CA    CB     sing N N 446 
THR CA    HA     sing N N 447 
THR C     O      doub N N 448 
THR C     OXT    sing N N 449 
THR CB    OG1    sing N N 450 
THR CB    CG2    sing N N 451 
THR CB    HB     sing N N 452 
THR OG1   HG1    sing N N 453 
THR CG2   HG21   sing N N 454 
THR CG2   HG22   sing N N 455 
THR CG2   HG23   sing N N 456 
THR OXT   HXT    sing N N 457 
TYR N     CA     sing N N 458 
TYR N     H      sing N N 459 
TYR N     H2     sing N N 460 
TYR CA    C      sing N N 461 
TYR CA    CB     sing N N 462 
TYR CA    HA     sing N N 463 
TYR C     O      doub N N 464 
TYR C     OXT    sing N N 465 
TYR CB    CG     sing N N 466 
TYR CB    HB2    sing N N 467 
TYR CB    HB3    sing N N 468 
TYR CG    CD1    doub Y N 469 
TYR CG    CD2    sing Y N 470 
TYR CD1   CE1    sing Y N 471 
TYR CD1   HD1    sing N N 472 
TYR CD2   CE2    doub Y N 473 
TYR CD2   HD2    sing N N 474 
TYR CE1   CZ     doub Y N 475 
TYR CE1   HE1    sing N N 476 
TYR CE2   CZ     sing Y N 477 
TYR CE2   HE2    sing N N 478 
TYR CZ    OH     sing N N 479 
TYR OH    HH     sing N N 480 
TYR OXT   HXT    sing N N 481 
U   OP3   P      sing N N 482 
U   OP3   HOP3   sing N N 483 
U   P     OP1    doub N N 484 
U   P     OP2    sing N N 485 
U   P     "O5'"  sing N N 486 
U   OP2   HOP2   sing N N 487 
U   "O5'" "C5'"  sing N N 488 
U   "C5'" "C4'"  sing N N 489 
U   "C5'" "H5'"  sing N N 490 
U   "C5'" "H5''" sing N N 491 
U   "C4'" "O4'"  sing N N 492 
U   "C4'" "C3'"  sing N N 493 
U   "C4'" "H4'"  sing N N 494 
U   "O4'" "C1'"  sing N N 495 
U   "C3'" "O3'"  sing N N 496 
U   "C3'" "C2'"  sing N N 497 
U   "C3'" "H3'"  sing N N 498 
U   "O3'" "HO3'" sing N N 499 
U   "C2'" "O2'"  sing N N 500 
U   "C2'" "C1'"  sing N N 501 
U   "C2'" "H2'"  sing N N 502 
U   "O2'" "HO2'" sing N N 503 
U   "C1'" N1     sing N N 504 
U   "C1'" "H1'"  sing N N 505 
U   N1    C2     sing N N 506 
U   N1    C6     sing N N 507 
U   C2    O2     doub N N 508 
U   C2    N3     sing N N 509 
U   N3    C4     sing N N 510 
U   N3    H3     sing N N 511 
U   C4    O4     doub N N 512 
U   C4    C5     sing N N 513 
U   C5    C6     doub N N 514 
U   C5    H5     sing N N 515 
U   C6    H6     sing N N 516 
VAL N     CA     sing N N 517 
VAL N     H      sing N N 518 
VAL N     H2     sing N N 519 
VAL CA    C      sing N N 520 
VAL CA    CB     sing N N 521 
VAL CA    HA     sing N N 522 
VAL C     O      doub N N 523 
VAL C     OXT    sing N N 524 
VAL CB    CG1    sing N N 525 
VAL CB    CG2    sing N N 526 
VAL CB    HB     sing N N 527 
VAL CG1   HG11   sing N N 528 
VAL CG1   HG12   sing N N 529 
VAL CG1   HG13   sing N N 530 
VAL CG2   HG21   sing N N 531 
VAL CG2   HG22   sing N N 532 
VAL CG2   HG23   sing N N 533 
VAL OXT   HXT    sing N N 534 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
3UD3 'double helix'         
3UD3 'a-form double helix'  
3UD3 'hairpin loop'         
3UD3 tetraloop              
3UD3 'bulge loop'           
3UD3 'mismatched base pair' 
3UD3 'quadruple helix'      
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 B C 4  1_555 B G 92 1_555 -0.405 0.537  0.699  11.498  -24.096 9.703    1  R_C11:G98_R R 11 ? R 98 ? ?  1  
1 B A 5  1_555 B G 91 1_555 -0.254 1.682  -0.655 -12.631 -19.979 -10.801  2  R_A12:G97_R R 12 ? R 97 ? 8  1  
1 B C 6  1_555 B G 88 1_555 -0.578 -0.165 -0.024 -15.745 -19.582 -4.437   3  R_C13:G94_R R 13 ? R 94 ? 19 1  
1 B G 7  1_555 B C 87 1_555 -0.327 0.133  0.171  7.440   -11.341 -0.579   4  R_G14:C93_R R 14 ? R 93 ? 19 1  
1 C A 2  1_555 B U 86 1_555 0.297  -0.026 0.307  8.461   -12.270 6.306    5  A_A2:U92_R  A 2  ? R 92 ? 20 1  
1 B G 12 1_555 B A 40 1_555 -0.376 2.901  0.096  -7.246  2.388   -55.766  6  R_G19:A47_R R 19 ? R 47 ? ?  ?  
1 B G 13 1_555 C G 1  1_555 5.993  -0.924 0.114  13.203  -7.961  -109.087 7  R_G20:G1_A  R 20 ? A 1  ? 7  4  
1 B G 14 1_555 B C 39 1_555 -0.031 0.031  -0.534 -3.683  2.694   2.402    8  R_G21:C46_R R 21 ? R 46 ? 19 1  
1 B C 15 1_555 B G 38 1_555 0.459  -0.030 0.078  2.259   -0.281  6.863    9  R_C22:G45_R R 22 ? R 45 ? 19 1  
1 B G 77 1_555 B C 37 1_555 -0.486 -0.319 0.590  6.003   -8.355  -3.363   10 R_G83:C44_R R 83 ? R 44 ? 19 1  
1 B A 18 1_555 B G 35 1_555 -6.829 -3.958 -0.124 2.505   -11.085 0.064    11 R_A25:G42_R R 25 ? R 42 ? 11 10 
1 B C 19 1_555 B G 34 1_555 0.441  -0.180 0.101  -1.924  -7.370  1.083    12 R_C26:G41_R R 26 ? R 41 ? 19 1  
1 B C 20 1_555 B G 33 1_555 0.496  -0.085 -0.023 5.513   -10.043 -0.926   13 R_C27:G40_R R 27 ? R 40 ? 19 1  
1 B A 21 1_555 B U 32 1_555 -0.090 -0.270 -0.735 -5.212  -20.583 4.850    14 R_A28:U39_R R 28 ? R 39 ? 20 1  
1 B U 22 1_555 B G 31 1_555 2.393  -0.724 -0.199 8.403   -17.274 3.727    15 R_U29:G38_R R 29 ? R 38 ? 28 1  
1 B U 23 1_555 B A 30 1_555 0.173  -0.313 0.084  1.518   -6.341  -1.151   16 R_U30:A37_R R 30 ? R 37 ? 20 1  
1 B C 24 1_555 B G 29 1_555 0.427  -0.293 -0.297 3.033   1.502   2.970    17 R_C31:G36_R R 31 ? R 36 ? 19 1  
1 B A 41 1_555 B U 84 1_555 -4.251 -2.618 -0.823 7.637   -4.756  -85.445  18 R_A48:U90_R R 48 ? R 90 ? 24 4  
1 B G 43 1_555 B U 83 1_555 -2.452 -0.630 -0.107 -0.430  -12.942 -2.489   19 R_G50:U89_R R 50 ? R 89 ? 28 1  
1 B C 44 1_555 B G 82 1_555 0.470  -0.256 -0.013 0.401   -15.010 1.296    20 R_C51:G88_R R 51 ? R 88 ? 19 1  
1 B C 45 1_555 B G 81 1_555 0.318  -0.084 -0.087 -1.833  -9.541  -1.758   21 R_C52:G87_R R 52 ? R 87 ? 19 1  
1 B C 47 1_555 B G 80 1_555 0.047  -0.172 -0.847 17.368  -10.303 -1.213   22 R_C54:G86_R R 54 ? R 86 ? 19 1  
1 B C 48 1_555 B G 79 1_555 0.277  -0.216 -0.415 10.142  -8.066  2.775    23 R_C55:G85_R R 55 ? R 85 ? 19 1  
1 B G 49 1_555 B C 78 1_555 -0.200 -0.034 -0.006 5.300   1.299   1.182    24 R_G56:C84_R R 56 ? R 84 ? 19 1  
1 B G 50 1_555 B U 75 1_555 -2.310 -0.229 -0.145 3.706   -4.164  -0.650   25 R_G57:U81_R R 57 ? R 81 ? 28 1  
1 B C 51 1_555 B G 74 1_555 0.405  -0.147 -0.136 14.871  -17.894 2.743    26 R_C58:G80_R R 58 ? R 80 ? 19 1  
1 B C 52 1_555 B G 73 1_555 0.158  0.011  0.079  0.242   -13.174 3.324    27 R_C59:G79_R R 59 ? R 79 ? 19 1  
1 B U 53 1_555 B A 72 1_555 0.124  0.164  0.154  -4.756  -1.154  5.259    28 R_U60:A78_R R 60 ? R 78 ? 20 1  
1 B A 54 1_555 B U 71 1_555 1.066  -0.260 0.352  -3.155  10.458  6.618    29 R_A61:U77_R R 61 ? R 77 ? 20 1  
1 B C 57 1_555 B G 70 1_555 -0.312 -0.069 -0.892 25.077  -31.090 0.196    30 R_C64:G76_R R 64 ? R 76 ? 19 1  
1 B C 58 1_555 B G 69 1_555 1.110  -0.273 0.254  -11.364 -18.727 5.754    31 R_C65:G75_R R 65 ? R 75 ? 19 1  
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 B C 4  1_555 B G 92 1_555 B A 5  1_555 B G 91 1_555 0.086  -2.169 3.713 7.916   8.960   34.331  -4.811 1.035  3.018 14.640  
-12.935 36.294  1  RR_C11A12:G97G98_RR R 11 ? R 98 ? R 12 ? R 97 ? 
1 B A 5  1_555 B G 91 1_555 B C 6  1_555 B G 88 1_555 1.953  -0.350 3.022 3.096   7.269   45.584  -1.025 -2.240 3.054 9.300   
-3.961  46.227  2  RR_A12C13:G94G97_RR R 12 ? R 97 ? R 13 ? R 94 ? 
1 B C 6  1_555 B G 88 1_555 B G 7  1_555 B C 87 1_555 -0.750 -0.293 2.969 -3.095  18.914  27.659  -3.302 0.842  2.365 34.770  
5.689   33.543  3  RR_C13G14:C93G94_RR R 13 ? R 94 ? R 14 ? R 93 ? 
1 B G 7  1_555 B C 87 1_555 C A 2  1_555 B U 86 1_555 -0.187 -0.881 3.124 -4.021  2.302   41.001  -1.486 -0.146 3.076 3.274   
5.718   41.251  4  RA_G14A2:U92C93_RR  R 14 ? R 93 ? A 2  ? R 92 ? 
1 C A 2  1_555 B U 86 1_555 B G 12 1_555 B A 40 1_555 -2.996 2.556  3.613 3.412   -3.291  114.667 1.557  1.819  3.507 -1.955  
-2.026  114.729 5  AR_A2G19:A47U92_RR  A 2  ? R 92 ? R 19 ? R 47 ? 
1 B G 12 1_555 B A 40 1_555 B G 13 1_555 C G 1  1_555 -0.372 -3.047 3.036 -5.443  4.988   50.353  -3.860 0.094  2.766 5.826   
6.358   50.857  6  RR_G19G20:G1A47_AR  R 19 ? R 47 ? R 20 ? A 1  ? 
1 B G 13 1_555 C G 1  1_555 B G 14 1_555 B C 39 1_555 1.418  -1.732 3.709 3.155   -1.255  -27.639 3.929  3.777  3.449 2.615   
6.572   -27.843 7  RR_G20G21:C46G1_RA  R 20 ? A 1  ? R 21 ? R 46 ? 
1 B G 14 1_555 B C 39 1_555 B C 15 1_555 B G 38 1_555 0.330  -1.645 3.242 -4.627  0.859   33.526  -2.960 -1.297 3.128 1.480   
7.972   33.845  8  RR_G21C22:G45C46_RR R 21 ? R 46 ? R 22 ? R 45 ? 
1 B C 15 1_555 B G 38 1_555 B G 77 1_555 B C 37 1_555 -5.634 0.042  3.219 -13.387 -10.051 54.485  0.704  5.044  4.317 -10.699 
14.250  56.810  9  RR_C22G83:C44G45_RR R 22 ? R 45 ? R 83 ? R 44 ? 
1 B A 18 1_555 B G 35 1_555 B C 19 1_555 B G 34 1_555 -0.582 -0.598 3.582 -8.927  5.985   65.412  -0.812 0.139  3.566 5.499   
8.203   66.192  10 RR_A25C26:G41G42_RR R 25 ? R 42 ? R 26 ? R 41 ? 
1 B C 19 1_555 B G 34 1_555 B C 20 1_555 B G 33 1_555 -0.528 -1.963 2.997 -0.612  4.335   29.748  -4.562 0.907  2.701 8.385   
1.184   30.061  11 RR_C26C27:G40G41_RR R 26 ? R 41 ? R 27 ? R 40 ? 
1 B C 20 1_555 B G 33 1_555 B A 21 1_555 B U 32 1_555 -0.063 -1.552 3.514 6.729   17.701  28.356  -5.338 1.127  2.141 32.015  
-12.171 33.990  12 RR_C27A28:U39G40_RR R 27 ? R 40 ? R 28 ? R 39 ? 
1 B A 21 1_555 B U 32 1_555 B U 22 1_555 B G 31 1_555 0.196  -0.768 2.882 -2.615  9.318   41.334  -1.874 -0.498 2.640 12.987  
3.645   42.404  13 RR_A28U29:G38U39_RR R 28 ? R 39 ? R 29 ? R 38 ? 
1 B U 22 1_555 B G 31 1_555 B U 23 1_555 B A 30 1_555 -0.013 -1.977 3.196 0.947   8.951   23.348  -6.879 0.275  2.289 21.138  
-2.237  25.001  14 RR_U29U30:A37G38_RR R 29 ? R 38 ? R 30 ? R 37 ? 
1 B U 23 1_555 B A 30 1_555 B C 24 1_555 B G 29 1_555 0.316  -1.733 3.174 4.148   8.046   31.579  -4.329 0.091  2.682 14.417  
-7.433  32.819  15 RR_U30C31:G36A37_RR R 30 ? R 37 ? R 31 ? R 36 ? 
1 B A 41 1_555 B U 84 1_555 B G 43 1_555 B U 83 1_555 2.945  -1.808 3.349 -11.340 6.290   62.178  -1.978 -3.266 2.656 6.021   
10.854  63.383  16 RR_A48G50:U89U90_RR R 48 ? R 90 ? R 50 ? R 89 ? 
1 B G 43 1_555 B U 83 1_555 B C 44 1_555 B G 82 1_555 0.110  -1.398 3.190 -4.609  7.010   43.563  -2.467 -0.549 2.917 9.342   
6.142   44.325  17 RR_G50C51:G88U89_RR R 50 ? R 89 ? R 51 ? R 88 ? 
1 B C 44 1_555 B G 82 1_555 B C 45 1_555 B G 81 1_555 -0.475 -1.797 3.518 3.204   5.354   33.741  -3.912 1.323  3.147 9.127   
-5.461  34.297  18 RR_C51C52:G87G88_RR R 51 ? R 88 ? R 52 ? R 87 ? 
1 B C 45 1_555 B G 81 1_555 B C 47 1_555 B G 80 1_555 -2.937 -1.086 2.884 8.841   6.608   50.042  -1.618 3.882  2.219 7.703   
-10.307 51.168  19 RR_C52C54:G86G87_RR R 52 ? R 87 ? R 54 ? R 86 ? 
1 B C 47 1_555 B G 80 1_555 B C 48 1_555 B G 79 1_555 -0.452 -2.104 3.688 -2.985  9.996   31.757  -5.386 0.273  2.939 17.680  
5.280   33.385  20 RR_C54C55:G85G86_RR R 54 ? R 86 ? R 55 ? R 85 ? 
1 B C 48 1_555 B G 79 1_555 B G 49 1_555 B C 78 1_555 -0.112 -1.969 3.419 -4.287  7.615   25.797  -6.026 -0.799 2.719 16.466  
9.271   27.213  21 RR_C55G56:C84G85_RR R 55 ? R 85 ? R 56 ? R 84 ? 
1 B G 49 1_555 B C 78 1_555 B G 50 1_555 B U 75 1_555 2.222  -1.653 3.025 0.001   10.659  40.353  -3.293 -3.123 2.527 15.134  
-0.001  41.681  22 RR_G56G57:U81C84_RR R 56 ? R 84 ? R 57 ? R 81 ? 
1 B G 50 1_555 B U 75 1_555 B C 51 1_555 B G 74 1_555 0.292  -1.086 3.073 -2.903  1.955   43.130  -1.650 -0.659 2.999 2.655   
3.942   43.265  23 RR_G57C58:G80U81_RR R 57 ? R 81 ? R 58 ? R 80 ? 
1 B C 51 1_555 B G 74 1_555 B C 52 1_555 B G 73 1_555 -0.623 -2.088 3.464 -3.888  10.378  30.366  -5.542 0.450  2.682 19.034  
7.131   32.281  24 RR_C58C59:G79G80_RR R 58 ? R 80 ? R 59 ? R 79 ? 
1 B C 52 1_555 B G 73 1_555 B U 53 1_555 B A 72 1_555 -0.285 -2.027 3.448 -1.124  6.349   28.604  -5.363 0.322  2.948 12.647  
2.239   29.307  25 RR_C59U60:A78G79_RR R 59 ? R 79 ? R 60 ? R 78 ? 
1 B U 53 1_555 B A 72 1_555 B A 54 1_555 B U 71 1_555 -0.030 -1.201 3.163 -3.174  21.319  29.663  -4.454 -0.330 1.901 36.235  
5.395   36.524  26 RR_U60A61:U77A78_RR R 60 ? R 78 ? R 61 ? R 77 ? 
1 B A 54 1_555 B U 71 1_555 B C 57 1_555 B G 70 1_555 -5.888 0.510  2.156 9.318   -4.497  70.071  0.527  5.265  1.433 -3.896  
-8.071  70.734  27 RR_A61C64:G76U77_RR R 61 ? R 77 ? R 64 ? R 76 ? 
1 B C 57 1_555 B G 70 1_555 B C 58 1_555 B G 69 1_555 0.043  -1.637 4.333 -6.837  12.692  38.433  -4.078 -0.998 3.582 18.505  
9.968   40.952  28 RR_C64C65:G75G76_RR R 64 ? R 76 ? R 65 ? R 75 ? 
# 
_atom_sites.entry_id                    3UD3 
_atom_sites.fract_transf_matrix[1][1]   0.020001 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.001744 
_atom_sites.fract_transf_matrix[2][1]   -0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.022031 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   -0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.012747 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C  
MG 
N  
O  
P  
S  
# 
loop_