HEADER TRANSPORT PROTEIN 04-NOV-11 3UIF TITLE CRYSTAL STRUCTURE OF PUTATIVE SULFONATE ABC TRANSPORTER, PERIPLASMIC TITLE 2 SULFONATE-BINDING PROTEIN SSUA FROM METHYLOBACILLUS FLAGELLATUS KT COMPND MOL_ID: 1; COMPND 2 MOLECULE: SULFONATE ABC TRANSPORTER, PERIPLASMIC SULFONATE-BINDING COMPND 3 PROTEIN SSUA; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHYLOBACILLUS FLAGELLATUS; SOURCE 3 ORGANISM_TAXID: 265072; SOURCE 4 STRAIN: KT; SOURCE 5 GENE: 4000324, MFLA_1563; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)CODON+RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: BC-PSGX3(BC) KEYWDS STRUCTURAL GENOMICS, CRYSTAL STRUCTURE,PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 NEW YORK STRUCTURAL GENOMIX RESEARCH CONSORTIUM, NYSGRC,SULFONATE KEYWDS 3 ABC TRANSPORTER, PSI-BIOLOGY, NEW YORK STRUCTURAL GENOMICS RESEARCH KEYWDS 4 CONSORTIUM, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.N.MALASHKEVICH,J.B.BONANNO,R.BHOSLE,R.TORO,R.SEIDEL,S.C.ALMO,NEW AUTHOR 2 YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC) REVDAT 1 23-NOV-11 3UIF 0 JRNL AUTH V.N.MALASHKEVICH,J.B.BONANNO,R.BHOSLE,R.TORO,R.SEIDEL, JRNL AUTH 2 S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE SULFONATE ABC TRANSPORTER, JRNL TITL 2 PERIPLASMIC SULFONATE-BINDING PROTEIN SSUA FROM JRNL TITL 3 METHYLOBACILLUS FLAGELLATUS KT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 11101 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 528 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 652 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 34 REMARK 3 BIN FREE R VALUE : 0.3180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2593 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 59 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.372 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.254 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 24.775 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2704 ; 0.009 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3685 ; 1.302 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 337 ; 5.616 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 121 ;38.792 ;24.380 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 437 ;17.385 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;15.339 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 407 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2054 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 24 A 503 REMARK 3 ORIGIN FOR THE GROUP (A): 1.8947 26.8726 3.8492 REMARK 3 T TENSOR REMARK 3 T11: 0.0406 T22: 0.0146 REMARK 3 T33: 0.0872 T12: 0.0071 REMARK 3 T13: 0.0281 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 1.9757 L22: 1.2290 REMARK 3 L33: 3.0658 L12: -0.2811 REMARK 3 L13: 0.9569 L23: 0.1659 REMARK 3 S TENSOR REMARK 3 S11: 0.0017 S12: -0.0549 S13: 0.0692 REMARK 3 S21: 0.1412 S22: -0.0278 S23: 0.0943 REMARK 3 S31: 0.0176 S32: -0.1217 S33: 0.0261 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3UIF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-NOV-11. REMARK 100 THE RCSB ID CODE IS RCSB068794. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22865 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.59 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.69900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LI-SULFATE, 0.1 M BIS-TRIS, 25% REMARK 280 PEG 3350, PH 5.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.44850 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 50.54850 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 50.54850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 50.17275 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 50.54850 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 50.54850 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 16.72425 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 50.54850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.54850 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 50.17275 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 50.54850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.54850 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 16.72425 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 33.44850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 23 REMARK 465 PHE A 354 REMARK 465 GLN A 355 REMARK 465 SER A 356 REMARK 465 HIS A 357 REMARK 465 HIS A 358 REMARK 465 HIS A 359 REMARK 465 HIS A 360 REMARK 465 HIS A 361 REMARK 465 HIS A 362 REMARK 465 TRP A 363 REMARK 465 SER A 364 REMARK 465 HIS A 365 REMARK 465 PRO A 366 REMARK 465 GLN A 367 REMARK 465 PHE A 368 REMARK 465 GLU A 369 REMARK 465 LYS A 370 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ALA A 76 CA ALA A 76 CB 0.133 REMARK 500 HIS A 330 CG HIS A 330 CD2 0.054 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 46 74.18 -55.10 REMARK 500 LYS A 108 133.98 -175.15 REMARK 500 THR A 110 -30.48 -131.85 REMARK 500 LEU A 195 -158.36 -95.64 REMARK 500 MSE A 223 -165.63 -129.75 REMARK 500 TYR A 296 55.54 -91.49 REMARK 500 LEU A 352 59.32 -58.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ALA A 76 23.7 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-001462 RELATED DB: TARGETDB DBREF 3UIF A 25 348 UNP Q1H106 Q1H106_METFK 25 348 SEQADV 3UIF MSE A 23 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF VAL A 24 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF ALA A 349 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF GLU A 350 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF ASN A 351 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF LEU A 352 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF TYR A 353 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF PHE A 354 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF GLN A 355 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF SER A 356 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF HIS A 357 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF HIS A 358 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF HIS A 359 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF HIS A 360 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF HIS A 361 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF HIS A 362 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF TRP A 363 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF SER A 364 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF HIS A 365 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF PRO A 366 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF GLN A 367 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF PHE A 368 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF GLU A 369 UNP Q1H106 EXPRESSION TAG SEQADV 3UIF LYS A 370 UNP Q1H106 EXPRESSION TAG SEQRES 1 A 348 MSE VAL GLU ASP LEU LYS VAL VAL ARG ILE ALA SER VAL SEQRES 2 A 348 ALA THR ASN VAL GLY GLY LYS THR VAL TYR ALA GLY SER SEQRES 3 A 348 ALA SER LEU VAL VAL ASN GLY ALA PHE PRO GLU GLU LEU SEQRES 4 A 348 ARG LYS GLN GLY ILE LYS VAL GLU TRP VAL PRO ALA ALA SEQRES 5 A 348 MSE ALA SER VAL GLY PRO VAL ILE ASN GLU GLY PHE ALA SEQRES 6 A 348 SER GLY LYS ILE ASP PHE GLY ILE TYR GLY ASP LEU PRO SEQRES 7 A 348 PRO ILE ILE LEU ASN ALA SER LYS PRO THR VAL GLN LEU SEQRES 8 A 348 VAL ALA PRO TRP GLY THR THR SER ASN SER TYR LEU VAL SEQRES 9 A 348 VAL PRO LYS ASN SER THR ALA LYS SER ILE LYS ASP LEU SEQRES 10 A 348 LYS GLY LYS LYS ILE ALA LEU HIS ARG GLY ARG PRO TRP SEQRES 11 A 348 GLU LEU ALA PHE SER ASN LEU LEU GLN SER GLU GLY LEU SEQRES 12 A 348 THR PHE LYS ASP PHE LYS ILE VAL ASN VAL ASN PRO GLN SEQRES 13 A 348 VAL GLY ALA ALA ALA LEU ALA SER GLY THR VAL ASP GLY SEQRES 14 A 348 PHE PHE SER LEU PHE ASP SER TYR ILE LEU GLU ASP ARG SEQRES 15 A 348 GLY VAL GLY LYS ILE ILE TRP SER THR LYS THR ALA PRO SEQRES 16 A 348 VAL ASP TRP LYS LEU MSE GLY GLY VAL TRP ALA ARG ASN SEQRES 17 A 348 ASP PHE VAL LYS GLN ASN PRO GLU ILE THR GLN ALA ILE SEQRES 18 A 348 VAL THR ALA TYR LEU LYS SER VAL HIS TRP VAL ALA GLN SEQRES 19 A 348 ASP GLU ASN LYS GLU THR TYR ILE ARG GLU TYR SER ASN SEQRES 20 A 348 LYS ILE TYR PRO GLU SER VAL ASN ARG ARG GLU TYR ASP SEQRES 21 A 348 GLN ASP ASN VAL SER TRP ARG GLN ARG TRP SER PRO LEU SEQRES 22 A 348 TYR ASP VAL ALA LEU GLN GLU HIS TYR ARG LYS ALA VAL SEQRES 23 A 348 ALA TYR ALA GLN ALA SER GLY LEU THR ARG THR GLN ALA SEQRES 24 A 348 ASP VAL GLN GLN MSE LEU ASN PRO HIS PHE VAL ALA THR SEQRES 25 A 348 ALA LEU LYS GLU LEU LYS LEU GLU GLY PHE TRP THR PRO SEQRES 26 A 348 ASN ALA GLU ASN LEU TYR PHE GLN SER HIS HIS HIS HIS SEQRES 27 A 348 HIS HIS TRP SER HIS PRO GLN PHE GLU LYS MODRES 3UIF MSE A 75 MET SELENOMETHIONINE MODRES 3UIF MSE A 223 MET SELENOMETHIONINE MODRES 3UIF MSE A 326 MET SELENOMETHIONINE HET MSE A 75 8 HET MSE A 223 8 HET MSE A 326 8 HET SO4 A 501 5 HET SO4 A 502 5 HET GOL A 503 6 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 GOL C3 H8 O3 FORMUL 5 HOH *59(H2 O) HELIX 1 1 GLY A 47 GLY A 55 1 9 HELIX 2 2 ALA A 56 GLN A 64 1 9 HELIX 3 3 SER A 77 SER A 88 1 12 HELIX 4 4 ASP A 98 LYS A 108 1 11 HELIX 5 5 SER A 135 LYS A 140 5 6 HELIX 6 6 PRO A 151 GLU A 163 1 13 HELIX 7 7 THR A 166 PHE A 170 5 5 HELIX 8 8 ASN A 176 SER A 186 1 11 HELIX 9 9 ASP A 197 ARG A 204 1 8 HELIX 10 10 LYS A 214 ALA A 216 5 3 HELIX 11 11 PRO A 217 LYS A 221 5 5 HELIX 12 12 ASN A 230 ASN A 236 1 7 HELIX 13 13 ASN A 236 GLN A 256 1 21 HELIX 14 14 ASN A 259 TYR A 267 1 9 HELIX 15 15 PRO A 273 GLU A 280 1 8 HELIX 16 16 ARG A 289 SER A 293 5 5 HELIX 17 17 ASP A 297 SER A 314 1 18 HELIX 18 18 ASP A 322 LEU A 327 1 6 HELIX 19 19 PRO A 329 LEU A 339 1 11 SHEET 1 A 3 LYS A 42 TYR A 45 0 SHEET 2 A 3 LYS A 28 VAL A 39 -1 N THR A 37 O VAL A 44 SHEET 3 A 3 ILE A 66 ALA A 73 1 O LYS A 67 N LYS A 28 SHEET 1 B 5 LYS A 42 TYR A 45 0 SHEET 2 B 5 LYS A 28 VAL A 39 -1 N THR A 37 O VAL A 44 SHEET 3 B 5 PHE A 93 GLY A 97 1 O ILE A 95 N ALA A 33 SHEET 4 B 5 GLY A 224 ARG A 229 -1 O TRP A 227 N GLY A 94 SHEET 5 B 5 VAL A 111 PRO A 116 -1 N ALA A 115 O VAL A 226 SHEET 1 C 5 LYS A 171 VAL A 173 0 SHEET 2 C 5 LYS A 143 LEU A 146 1 N LEU A 146 O VAL A 173 SHEET 3 C 5 GLY A 191 SER A 194 1 O GLY A 191 N ALA A 145 SHEET 4 C 5 TYR A 124 PRO A 128 -1 N TYR A 124 O SER A 194 SHEET 5 C 5 GLY A 207 SER A 212 -1 O ILE A 210 N LEU A 125 LINK C ALA A 74 N MSE A 75 1555 1555 1.32 LINK C MSE A 75 N ALA A 76 1555 1555 1.33 LINK C LEU A 222 N MSE A 223 1555 1555 1.33 LINK C MSE A 223 N GLY A 224 1555 1555 1.33 LINK C GLN A 325 N MSE A 326 1555 1555 1.33 LINK C MSE A 326 N LEU A 327 1555 1555 1.33 SITE 1 AC1 6 LYS A 42 MSE A 75 HIS A 147 ARG A 150 SITE 2 AC1 6 TRP A 152 PRO A 177 SITE 1 AC2 5 ASN A 174 PRO A 273 GLU A 274 SER A 275 SITE 2 AC2 5 HOH A 641 SITE 1 AC3 5 TRP A 117 THR A 119 TYR A 281 ARG A 291 SITE 2 AC3 5 TRP A 292 CRYST1 101.097 101.097 66.897 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009891 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009891 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014948 0.00000