data_3UIY # _entry.id 3UIY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3UIY pdb_00003uiy 10.2210/pdb3uiy/pdb RCSB RCSB068813 ? ? WWPDB D_1000068813 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3UIZ _pdbx_database_related.details 'Crystal structure of SefD_dscA in D2O' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3UIY _pdbx_database_status.recvd_initial_deposition_date 2011-11-07 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Garnett, J.A.' 1 'Wei-chao, L.' 2 'Liu, B.' 3 'Matthews, S.J.' 4 # _citation.id primary _citation.title 'Promoting crystallisation of the Salmonella enteritidis fimbriae 14 pilin SefD using deuterium oxide.' _citation.journal_abbrev Biochem.Biophys.Res.Commun. _citation.journal_volume 421 _citation.page_first 208 _citation.page_last 213 _citation.year 2012 _citation.journal_id_ASTM BBRCA9 _citation.country US _citation.journal_id_ISSN 0006-291X _citation.journal_id_CSD 0146 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22497887 _citation.pdbx_database_id_DOI 10.1016/j.bbrc.2012.03.136 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liu, B.' 1 ? primary 'Garnett, J.A.' 2 ? primary 'Lee, W.C.' 3 ? primary 'Lin, J.' 4 ? primary 'Salgado, P.' 5 ? primary 'Taylor, J.' 6 ? primary 'Xu, Y.' 7 ? primary 'Lambert, S.' 8 ? primary 'Cota, E.' 9 ? primary 'Matthews, S.' 10 ? # _cell.entry_id 3UIY _cell.length_a 52.480 _cell.length_b 52.480 _cell.length_c 218.030 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3UIY _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Chimera protein of SefD and SefA' _entity.formula_weight 16914.174 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSHHHHHHGSLKLMIKINEAVFYDRITSNKIIGTGHLFNREGKKILISSSLEKIKNTPGAYIIRGQNNSAHKLRIRIGG EDWQPDNSGIGMVSHSDFTNEFNIYFFGNGDIPVDTYLISIYATEIELDNKQGFVGNKAVVQAAVTIAAKLN ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSHHHHHHGSLKLMIKINEAVFYDRITSNKIIGTGHLFNREGKKILISSSLEKIKNTPGAYIIRGQNNSAHKLRIRIGG EDWQPDNSGIGMVSHSDFTNEFNIYFFGNGDIPVDTYLISIYATEIELDNKQGFVGNKAVVQAAVTIAAKLN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 GLY n 1 11 SER n 1 12 LEU n 1 13 LYS n 1 14 LEU n 1 15 MET n 1 16 ILE n 1 17 LYS n 1 18 ILE n 1 19 ASN n 1 20 GLU n 1 21 ALA n 1 22 VAL n 1 23 PHE n 1 24 TYR n 1 25 ASP n 1 26 ARG n 1 27 ILE n 1 28 THR n 1 29 SER n 1 30 ASN n 1 31 LYS n 1 32 ILE n 1 33 ILE n 1 34 GLY n 1 35 THR n 1 36 GLY n 1 37 HIS n 1 38 LEU n 1 39 PHE n 1 40 ASN n 1 41 ARG n 1 42 GLU n 1 43 GLY n 1 44 LYS n 1 45 LYS n 1 46 ILE n 1 47 LEU n 1 48 ILE n 1 49 SER n 1 50 SER n 1 51 SER n 1 52 LEU n 1 53 GLU n 1 54 LYS n 1 55 ILE n 1 56 LYS n 1 57 ASN n 1 58 THR n 1 59 PRO n 1 60 GLY n 1 61 ALA n 1 62 TYR n 1 63 ILE n 1 64 ILE n 1 65 ARG n 1 66 GLY n 1 67 GLN n 1 68 ASN n 1 69 ASN n 1 70 SER n 1 71 ALA n 1 72 HIS n 1 73 LYS n 1 74 LEU n 1 75 ARG n 1 76 ILE n 1 77 ARG n 1 78 ILE n 1 79 GLY n 1 80 GLY n 1 81 GLU n 1 82 ASP n 1 83 TRP n 1 84 GLN n 1 85 PRO n 1 86 ASP n 1 87 ASN n 1 88 SER n 1 89 GLY n 1 90 ILE n 1 91 GLY n 1 92 MET n 1 93 VAL n 1 94 SER n 1 95 HIS n 1 96 SER n 1 97 ASP n 1 98 PHE n 1 99 THR n 1 100 ASN n 1 101 GLU n 1 102 PHE n 1 103 ASN n 1 104 ILE n 1 105 TYR n 1 106 PHE n 1 107 PHE n 1 108 GLY n 1 109 ASN n 1 110 GLY n 1 111 ASP n 1 112 ILE n 1 113 PRO n 1 114 VAL n 1 115 ASP n 1 116 THR n 1 117 TYR n 1 118 LEU n 1 119 ILE n 1 120 SER n 1 121 ILE n 1 122 TYR n 1 123 ALA n 1 124 THR n 1 125 GLU n 1 126 ILE n 1 127 GLU n 1 128 LEU n 1 129 ASP n 1 130 ASN n 1 131 LYS n 1 132 GLN n 1 133 GLY n 1 134 PHE n 1 135 VAL n 1 136 GLY n 1 137 ASN n 1 138 LYS n 1 139 ALA n 1 140 VAL n 1 141 VAL n 1 142 GLN n 1 143 ALA n 1 144 ALA n 1 145 VAL n 1 146 THR n 1 147 ILE n 1 148 ALA n 1 149 ALA n 1 150 LYS n 1 151 LEU n 1 152 ASN n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? 12 128 ? ? sefD ? ? ? ? ? ? 'Salmonella enterica subsp. enterica serovar Enteritidis' 149539 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21 (DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pQE-30 ? ? 1 2 sample ? 133 149 ? ? sefD ? ? ? ? ? ? 'Salmonella enterica subsp. enterica serovar Enteritidis' 149539 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21 (DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pQE-30 ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q53997_SALEN Q53997 1 ;LKLMIKINEAVFYDRITSNKIIGTGHLFNREGKKILISSSLEKIKNTPGAYIIRGQNNSAHKLRIRIGGEDWQPDNSGIG MVSHSDFTNEFNIYFFGNGDIPVDTYLISIYATEIEL ; 32 ? 2 UNP FM_SALEN P12061 1 GFVGNKAVVQAAVTIAA 23 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3UIY A 12 ? 128 ? Q53997 32 ? 148 ? 3 119 2 2 3UIY A 133 ? 149 ? P12061 23 ? 39 ? 124 140 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3UIY MET A 1 ? UNP Q53997 ? ? 'expression tag' -8 1 1 3UIY GLY A 2 ? UNP Q53997 ? ? 'expression tag' -7 2 1 3UIY SER A 3 ? UNP Q53997 ? ? 'expression tag' -6 3 1 3UIY HIS A 4 ? UNP Q53997 ? ? 'expression tag' -5 4 1 3UIY HIS A 5 ? UNP Q53997 ? ? 'expression tag' -4 5 1 3UIY HIS A 6 ? UNP Q53997 ? ? 'expression tag' -3 6 1 3UIY HIS A 7 ? UNP Q53997 ? ? 'expression tag' -2 7 1 3UIY HIS A 8 ? UNP Q53997 ? ? 'expression tag' -1 8 1 3UIY HIS A 9 ? UNP Q53997 ? ? 'expression tag' 0 9 1 3UIY GLY A 10 ? UNP Q53997 ? ? 'expression tag' 1 10 1 3UIY SER A 11 ? UNP Q53997 ? ? 'expression tag' 2 11 1 3UIY ASP A 129 ? UNP Q53997 ? ? linker 120 12 1 3UIY ASN A 130 ? UNP Q53997 ? ? linker 121 13 1 3UIY LYS A 131 ? UNP Q53997 ? ? linker 122 14 1 3UIY GLN A 132 ? UNP Q53997 ? ? linker 123 15 2 3UIY LYS A 150 ? UNP P12061 ? ? 'expression tag' 141 16 2 3UIY LEU A 151 ? UNP P12061 ? ? 'expression tag' 142 17 2 3UIY ASN A 152 ? UNP P12061 ? ? 'expression tag' 143 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3UIY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.56 _exptl_crystal.density_percent_sol 51.99 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details '4 M ammonium acetate, 0.1 M sodium acetate, pH 4.6, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2011-02-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double Crystal Monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9778 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I24' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I24 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9778 # _reflns.entry_id 3UIY _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 45.45 _reflns.d_resolution_high 3.1 _reflns.number_obs 3659 _reflns.number_all ? _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs 0.072 _reflns.pdbx_Rsym_value 0.072 _reflns.pdbx_netI_over_sigmaI 15.2 _reflns.B_iso_Wilson_estimate 71.841 _reflns.pdbx_redundancy 4.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 3.1 _reflns_shell.d_res_low 3.18 _reflns_shell.percent_possible_all 99.5 _reflns_shell.Rmerge_I_obs 0.443 _reflns_shell.pdbx_Rsym_value 0.443 _reflns_shell.meanI_over_sigI_obs 3.2 _reflns_shell.pdbx_redundancy 4.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 250 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3UIY _refine.ls_number_reflns_obs 3450 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 2 _refine.pdbx_ls_sigma_F 2 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.45 _refine.ls_d_res_high 3.10 _refine.ls_percent_reflns_obs 97.88 _refine.ls_R_factor_obs 0.27027 _refine.ls_R_factor_all 0.27027 _refine.ls_R_factor_R_work 0.26793 _refine.ls_R_factor_R_free 0.33151 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.3 _refine.ls_number_reflns_R_free 154 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.887 _refine.correlation_coeff_Fo_to_Fc_free 0.810 _refine.B_iso_mean 64.710 _refine.aniso_B[1][1] 0.31 _refine.aniso_B[2][2] 0.31 _refine.aniso_B[3][3] -0.46 _refine.aniso_B[1][2] 0.15 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model 'PDB ENTRY 2AXW' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model TLS _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.556 _refine.overall_SU_ML 0.330 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 43.435 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 935 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 935 _refine_hist.d_res_high 3.10 _refine_hist.d_res_low 45.45 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.010 0.019 ? 980 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.811 1.940 ? 1334 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 8.258 5.000 ? 131 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 34.287 23.889 ? 36 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 17.155 15.000 ? 142 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 17.084 15.000 ? 4 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.118 0.200 ? 160 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.006 0.020 ? 735 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.103 _refine_ls_shell.d_res_low 3.183 _refine_ls_shell.number_reflns_R_work 180 _refine_ls_shell.R_factor_R_work 0.300 _refine_ls_shell.percent_reflns_obs 98.95 _refine_ls_shell.R_factor_R_free 0.228 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 8 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1155 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3UIY _struct.title 'Crystal structure of SefD_dscA in H2O' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3UIY _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' _struct_keywords.text ;deuterium, pilin, Immunoglobulin, Immunoglobulin like fold, Chaperone-usher minor pilin domain, Extracellular membrane surface, STRUCTURAL PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ;Author stated that the biological unit of SefD is a monomer. It is dimeric in the crystal structure (and purifies as a dimer) due to sheet interactions stabilized by residues 141-143. However, these residues are non-native (encoded by the vector) and as such it is monomeric in its native form ; # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 13 ? LYS A 17 ? LYS A 4 LYS A 8 A 2 ILE A 32 ? PHE A 39 ? ILE A 23 PHE A 30 A 3 GLU A 101 ? PHE A 106 ? GLU A 92 PHE A 97 A 4 LYS A 73 ? GLY A 79 ? LYS A 64 GLY A 70 A 5 ALA A 61 ? ARG A 65 ? ALA A 52 ARG A 56 A 6 GLU A 53 ? LYS A 54 ? GLU A 44 LYS A 45 B 1 ILE A 46 ? SER A 49 ? ILE A 37 SER A 40 B 2 THR A 116 ? GLU A 125 ? THR A 107 GLU A 116 B 3 ALA A 139 ? THR A 146 ? ALA A 130 THR A 137 C 1 GLN A 84 ? PRO A 85 ? GLN A 75 PRO A 76 C 2 MET A 92 ? VAL A 93 ? MET A 83 VAL A 84 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 17 ? N LYS A 8 O THR A 35 ? O THR A 26 A 2 3 N ILE A 33 ? N ILE A 24 O ILE A 104 ? O ILE A 95 A 3 4 O ASN A 103 ? O ASN A 94 N GLY A 79 ? N GLY A 70 A 4 5 O ILE A 76 ? O ILE A 67 N TYR A 62 ? N TYR A 53 A 5 6 O ILE A 63 ? O ILE A 54 N GLU A 53 ? N GLU A 44 B 1 2 N SER A 49 ? N SER A 40 O TYR A 122 ? O TYR A 113 B 2 3 N TYR A 117 ? N TYR A 108 O VAL A 145 ? O VAL A 136 C 1 2 N GLN A 84 ? N GLN A 75 O VAL A 93 ? O VAL A 84 # _database_PDB_matrix.entry_id 3UIY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3UIY _atom_sites.fract_transf_matrix[1][1] 0.019055 _atom_sites.fract_transf_matrix[1][2] 0.011001 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022003 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004587 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -8 ? ? ? A . n A 1 2 GLY 2 -7 ? ? ? A . n A 1 3 SER 3 -6 ? ? ? A . n A 1 4 HIS 4 -5 ? ? ? A . n A 1 5 HIS 5 -4 ? ? ? A . n A 1 6 HIS 6 -3 ? ? ? A . n A 1 7 HIS 7 -2 ? ? ? A . n A 1 8 HIS 8 -1 ? ? ? A . n A 1 9 HIS 9 0 ? ? ? A . n A 1 10 GLY 10 1 ? ? ? A . n A 1 11 SER 11 2 ? ? ? A . n A 1 12 LEU 12 3 3 LEU LEU A . n A 1 13 LYS 13 4 4 LYS LYS A . n A 1 14 LEU 14 5 5 LEU LEU A . n A 1 15 MET 15 6 6 MET MET A . n A 1 16 ILE 16 7 7 ILE ILE A . n A 1 17 LYS 17 8 8 LYS LYS A . n A 1 18 ILE 18 9 9 ILE ILE A . n A 1 19 ASN 19 10 10 ASN ASN A . n A 1 20 GLU 20 11 11 GLU GLU A . n A 1 21 ALA 21 12 12 ALA ALA A . n A 1 22 VAL 22 13 13 VAL VAL A . n A 1 23 PHE 23 14 14 PHE PHE A . n A 1 24 TYR 24 15 15 TYR TYR A . n A 1 25 ASP 25 16 16 ASP ASP A . n A 1 26 ARG 26 17 17 ARG ARG A . n A 1 27 ILE 27 18 18 ILE ILE A . n A 1 28 THR 28 19 19 THR THR A . n A 1 29 SER 29 20 20 SER SER A . n A 1 30 ASN 30 21 21 ASN ASN A . n A 1 31 LYS 31 22 22 LYS LYS A . n A 1 32 ILE 32 23 23 ILE ILE A . n A 1 33 ILE 33 24 24 ILE ILE A . n A 1 34 GLY 34 25 25 GLY GLY A . n A 1 35 THR 35 26 26 THR THR A . n A 1 36 GLY 36 27 27 GLY GLY A . n A 1 37 HIS 37 28 28 HIS HIS A . n A 1 38 LEU 38 29 29 LEU LEU A . n A 1 39 PHE 39 30 30 PHE PHE A . n A 1 40 ASN 40 31 31 ASN ASN A . n A 1 41 ARG 41 32 32 ARG ARG A . n A 1 42 GLU 42 33 33 GLU GLU A . n A 1 43 GLY 43 34 34 GLY GLY A . n A 1 44 LYS 44 35 35 LYS LYS A . n A 1 45 LYS 45 36 36 LYS LYS A . n A 1 46 ILE 46 37 37 ILE ILE A . n A 1 47 LEU 47 38 38 LEU LEU A . n A 1 48 ILE 48 39 39 ILE ILE A . n A 1 49 SER 49 40 40 SER SER A . n A 1 50 SER 50 41 41 SER SER A . n A 1 51 SER 51 42 42 SER SER A . n A 1 52 LEU 52 43 43 LEU LEU A . n A 1 53 GLU 53 44 44 GLU GLU A . n A 1 54 LYS 54 45 45 LYS LYS A . n A 1 55 ILE 55 46 46 ILE ILE A . n A 1 56 LYS 56 47 47 LYS LYS A . n A 1 57 ASN 57 48 48 ASN ASN A . n A 1 58 THR 58 49 49 THR THR A . n A 1 59 PRO 59 50 50 PRO PRO A . n A 1 60 GLY 60 51 51 GLY GLY A . n A 1 61 ALA 61 52 52 ALA ALA A . n A 1 62 TYR 62 53 53 TYR TYR A . n A 1 63 ILE 63 54 54 ILE ILE A . n A 1 64 ILE 64 55 55 ILE ILE A . n A 1 65 ARG 65 56 56 ARG ARG A . n A 1 66 GLY 66 57 57 GLY GLY A . n A 1 67 GLN 67 58 58 GLN GLN A . n A 1 68 ASN 68 59 59 ASN ASN A . n A 1 69 ASN 69 60 60 ASN ASN A . n A 1 70 SER 70 61 61 SER SER A . n A 1 71 ALA 71 62 62 ALA ALA A . n A 1 72 HIS 72 63 63 HIS HIS A . n A 1 73 LYS 73 64 64 LYS LYS A . n A 1 74 LEU 74 65 65 LEU LEU A . n A 1 75 ARG 75 66 66 ARG ARG A . n A 1 76 ILE 76 67 67 ILE ILE A . n A 1 77 ARG 77 68 68 ARG ARG A . n A 1 78 ILE 78 69 69 ILE ILE A . n A 1 79 GLY 79 70 70 GLY GLY A . n A 1 80 GLY 80 71 71 GLY GLY A . n A 1 81 GLU 81 72 72 GLU GLU A . n A 1 82 ASP 82 73 73 ASP ASP A . n A 1 83 TRP 83 74 74 TRP TRP A . n A 1 84 GLN 84 75 75 GLN GLN A . n A 1 85 PRO 85 76 76 PRO PRO A . n A 1 86 ASP 86 77 77 ASP ASP A . n A 1 87 ASN 87 78 78 ASN ASN A . n A 1 88 SER 88 79 79 SER SER A . n A 1 89 GLY 89 80 80 GLY GLY A . n A 1 90 ILE 90 81 81 ILE ILE A . n A 1 91 GLY 91 82 82 GLY GLY A . n A 1 92 MET 92 83 83 MET MET A . n A 1 93 VAL 93 84 84 VAL VAL A . n A 1 94 SER 94 85 85 SER SER A . n A 1 95 HIS 95 86 86 HIS HIS A . n A 1 96 SER 96 87 87 SER SER A . n A 1 97 ASP 97 88 88 ASP ASP A . n A 1 98 PHE 98 89 89 PHE PHE A . n A 1 99 THR 99 90 90 THR THR A . n A 1 100 ASN 100 91 91 ASN ASN A . n A 1 101 GLU 101 92 92 GLU GLU A . n A 1 102 PHE 102 93 93 PHE PHE A . n A 1 103 ASN 103 94 94 ASN ASN A . n A 1 104 ILE 104 95 95 ILE ILE A . n A 1 105 TYR 105 96 96 TYR TYR A . n A 1 106 PHE 106 97 97 PHE PHE A . n A 1 107 PHE 107 98 98 PHE PHE A . n A 1 108 GLY 108 99 99 GLY GLY A . n A 1 109 ASN 109 100 100 ASN ASN A . n A 1 110 GLY 110 101 101 GLY GLY A . n A 1 111 ASP 111 102 102 ASP ASP A . n A 1 112 ILE 112 103 103 ILE ILE A . n A 1 113 PRO 113 104 104 PRO PRO A . n A 1 114 VAL 114 105 105 VAL VAL A . n A 1 115 ASP 115 106 106 ASP ASP A . n A 1 116 THR 116 107 107 THR THR A . n A 1 117 TYR 117 108 108 TYR TYR A . n A 1 118 LEU 118 109 109 LEU LEU A . n A 1 119 ILE 119 110 110 ILE ILE A . n A 1 120 SER 120 111 111 SER SER A . n A 1 121 ILE 121 112 112 ILE ILE A . n A 1 122 TYR 122 113 113 TYR TYR A . n A 1 123 ALA 123 114 114 ALA ALA A . n A 1 124 THR 124 115 115 THR THR A . n A 1 125 GLU 125 116 116 GLU GLU A . n A 1 126 ILE 126 117 117 ILE ILE A . n A 1 127 GLU 127 118 118 GLU GLU A . n A 1 128 LEU 128 119 ? ? ? A . n A 1 129 ASP 129 120 ? ? ? A . n A 1 130 ASN 130 121 ? ? ? A . n A 1 131 LYS 131 122 ? ? ? A . n A 1 132 GLN 132 123 ? ? ? A . n A 1 133 GLY 133 124 ? ? ? A . n A 1 134 PHE 134 125 ? ? ? A . n A 1 135 VAL 135 126 ? ? ? A . n A 1 136 GLY 136 127 ? ? ? A . n A 1 137 ASN 137 128 ? ? ? A . n A 1 138 LYS 138 129 129 LYS LYS A . n A 1 139 ALA 139 130 130 ALA ALA A . n A 1 140 VAL 140 131 131 VAL VAL A . n A 1 141 VAL 141 132 132 VAL VAL A . n A 1 142 GLN 142 133 133 GLN GLN A . n A 1 143 ALA 143 134 134 ALA ALA A . n A 1 144 ALA 144 135 135 ALA ALA A . n A 1 145 VAL 145 136 136 VAL VAL A . n A 1 146 THR 146 137 137 THR THR A . n A 1 147 ILE 147 138 138 ILE ILE A . n A 1 148 ALA 148 139 139 ALA ALA A . n A 1 149 ALA 149 140 140 ALA ALA A . n A 1 150 LYS 150 141 141 LYS LYS A . n A 1 151 LEU 151 142 142 LEU LEU A . n A 1 152 ASN 152 143 143 ASN ASN A . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A 2 1,2 A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 2090 ? 2 MORE -13 ? 2 'SSA (A^2)' 12650 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_554 y,x,-z-1/3 -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -72.6766666667 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-05-02 2 'Structure model' 1 1 2013-01-09 3 'Structure model' 1 2 2017-07-26 4 'Structure model' 1 3 2017-11-08 5 'Structure model' 1 4 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Refinement description' 4 3 'Structure model' 'Source and taxonomy' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' diffrn_detector 2 3 'Structure model' entity_src_gen 3 3 'Structure model' software 4 4 'Structure model' software 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond 7 5 'Structure model' database_2 8 5 'Structure model' pdbx_initial_refinement_model 9 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_diffrn_detector.detector' 2 4 'Structure model' '_software.classification' 3 4 'Structure model' '_software.name' 4 5 'Structure model' '_database_2.pdbx_DOI' 5 5 'Structure model' '_database_2.pdbx_database_accession' 6 5 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -13.1952 _pdbx_refine_tls.origin_y -5.3900 _pdbx_refine_tls.origin_z -54.2472 _pdbx_refine_tls.T[1][1] 0.0937 _pdbx_refine_tls.T[2][2] 0.4142 _pdbx_refine_tls.T[3][3] 0.2229 _pdbx_refine_tls.T[1][2] -0.0100 _pdbx_refine_tls.T[1][3] 0.0414 _pdbx_refine_tls.T[2][3] 0.0596 _pdbx_refine_tls.L[1][1] 4.2482 _pdbx_refine_tls.L[2][2] 1.7736 _pdbx_refine_tls.L[3][3] 3.1118 _pdbx_refine_tls.L[1][2] -0.9970 _pdbx_refine_tls.L[1][3] 2.4346 _pdbx_refine_tls.L[2][3] 0.6834 _pdbx_refine_tls.S[1][1] -0.0960 _pdbx_refine_tls.S[1][2] 0.3733 _pdbx_refine_tls.S[1][3] 0.3251 _pdbx_refine_tls.S[2][1] -0.1078 _pdbx_refine_tls.S[2][2] -0.1517 _pdbx_refine_tls.S[2][3] 0.1332 _pdbx_refine_tls.S[3][1] -0.0747 _pdbx_refine_tls.S[3][2] -0.1012 _pdbx_refine_tls.S[3][3] 0.2477 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 3 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 143 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Adxv 'data processing' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.6.0117 ? 3 xia2 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 33 ? ? -35.98 137.49 2 1 SER A 40 ? ? -161.72 -168.38 3 1 ASN A 59 ? ? -63.95 -72.38 4 1 PHE A 98 ? ? -149.77 28.73 5 1 ASP A 102 ? ? -46.68 156.70 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 4 ? CG ? A LYS 13 CG 2 1 Y 1 A LYS 4 ? CD ? A LYS 13 CD 3 1 Y 1 A LYS 4 ? CE ? A LYS 13 CE 4 1 Y 1 A LYS 4 ? NZ ? A LYS 13 NZ 5 1 Y 1 A LYS 8 ? CG ? A LYS 17 CG 6 1 Y 1 A LYS 8 ? CD ? A LYS 17 CD 7 1 Y 1 A LYS 8 ? CE ? A LYS 17 CE 8 1 Y 1 A LYS 8 ? NZ ? A LYS 17 NZ 9 1 Y 1 A GLU 11 ? CG ? A GLU 20 CG 10 1 Y 1 A GLU 11 ? CD ? A GLU 20 CD 11 1 Y 1 A GLU 11 ? OE1 ? A GLU 20 OE1 12 1 Y 1 A GLU 11 ? OE2 ? A GLU 20 OE2 13 1 Y 1 A ARG 17 ? NE ? A ARG 26 NE 14 1 Y 1 A ARG 17 ? CZ ? A ARG 26 CZ 15 1 Y 1 A ARG 17 ? NH1 ? A ARG 26 NH1 16 1 Y 1 A ARG 17 ? NH2 ? A ARG 26 NH2 17 1 Y 1 A LYS 22 ? CG ? A LYS 31 CG 18 1 Y 1 A LYS 22 ? CD ? A LYS 31 CD 19 1 Y 1 A LYS 22 ? CE ? A LYS 31 CE 20 1 Y 1 A LYS 22 ? NZ ? A LYS 31 NZ 21 1 Y 1 A ASN 31 ? CG ? A ASN 40 CG 22 1 Y 1 A ASN 31 ? OD1 ? A ASN 40 OD1 23 1 Y 1 A ASN 31 ? ND2 ? A ASN 40 ND2 24 1 Y 1 A ARG 32 ? CG ? A ARG 41 CG 25 1 Y 1 A ARG 32 ? CD ? A ARG 41 CD 26 1 Y 1 A ARG 32 ? NE ? A ARG 41 NE 27 1 Y 1 A ARG 32 ? CZ ? A ARG 41 CZ 28 1 Y 1 A ARG 32 ? NH1 ? A ARG 41 NH1 29 1 Y 1 A ARG 32 ? NH2 ? A ARG 41 NH2 30 1 Y 1 A LYS 35 ? CG ? A LYS 44 CG 31 1 Y 1 A LYS 35 ? CD ? A LYS 44 CD 32 1 Y 1 A LYS 35 ? CE ? A LYS 44 CE 33 1 Y 1 A LYS 35 ? NZ ? A LYS 44 NZ 34 1 Y 1 A LYS 36 ? CG ? A LYS 45 CG 35 1 Y 1 A LYS 36 ? CD ? A LYS 45 CD 36 1 Y 1 A LYS 36 ? CE ? A LYS 45 CE 37 1 Y 1 A LYS 36 ? NZ ? A LYS 45 NZ 38 1 Y 1 A LYS 45 ? CG ? A LYS 54 CG 39 1 Y 1 A LYS 45 ? CD ? A LYS 54 CD 40 1 Y 1 A LYS 45 ? CE ? A LYS 54 CE 41 1 Y 1 A LYS 45 ? NZ ? A LYS 54 NZ 42 1 Y 1 A LYS 47 ? CG ? A LYS 56 CG 43 1 Y 1 A LYS 47 ? CD ? A LYS 56 CD 44 1 Y 1 A LYS 47 ? CE ? A LYS 56 CE 45 1 Y 1 A LYS 47 ? NZ ? A LYS 56 NZ 46 1 Y 1 A ASN 48 ? CG ? A ASN 57 CG 47 1 Y 1 A ASN 48 ? OD1 ? A ASN 57 OD1 48 1 Y 1 A ASN 48 ? ND2 ? A ASN 57 ND2 49 1 Y 1 A GLU 72 ? CG ? A GLU 81 CG 50 1 Y 1 A GLU 72 ? CD ? A GLU 81 CD 51 1 Y 1 A GLU 72 ? OE1 ? A GLU 81 OE1 52 1 Y 1 A GLU 72 ? OE2 ? A GLU 81 OE2 53 1 Y 1 A ASP 73 ? CG ? A ASP 82 CG 54 1 Y 1 A ASP 73 ? OD1 ? A ASP 82 OD1 55 1 Y 1 A ASP 73 ? OD2 ? A ASP 82 OD2 56 1 Y 1 A ASP 88 ? CG ? A ASP 97 CG 57 1 Y 1 A ASP 88 ? OD1 ? A ASP 97 OD1 58 1 Y 1 A ASP 88 ? OD2 ? A ASP 97 OD2 59 1 Y 1 A PHE 89 ? CG ? A PHE 98 CG 60 1 Y 1 A PHE 89 ? CD1 ? A PHE 98 CD1 61 1 Y 1 A PHE 89 ? CD2 ? A PHE 98 CD2 62 1 Y 1 A PHE 89 ? CE1 ? A PHE 98 CE1 63 1 Y 1 A PHE 89 ? CE2 ? A PHE 98 CE2 64 1 Y 1 A PHE 89 ? CZ ? A PHE 98 CZ 65 1 Y 1 A GLU 92 ? CG ? A GLU 101 CG 66 1 Y 1 A GLU 92 ? CD ? A GLU 101 CD 67 1 Y 1 A GLU 92 ? OE1 ? A GLU 101 OE1 68 1 Y 1 A GLU 92 ? OE2 ? A GLU 101 OE2 69 1 Y 1 A ASN 100 ? CG ? A ASN 109 CG 70 1 Y 1 A ASN 100 ? OD1 ? A ASN 109 OD1 71 1 Y 1 A ASN 100 ? ND2 ? A ASN 109 ND2 72 1 Y 1 A ASP 102 ? CG ? A ASP 111 CG 73 1 Y 1 A ASP 102 ? OD1 ? A ASP 111 OD1 74 1 Y 1 A ASP 102 ? OD2 ? A ASP 111 OD2 75 1 Y 1 A GLU 116 ? CG ? A GLU 125 CG 76 1 Y 1 A GLU 116 ? CD ? A GLU 125 CD 77 1 Y 1 A GLU 116 ? OE1 ? A GLU 125 OE1 78 1 Y 1 A GLU 116 ? OE2 ? A GLU 125 OE2 79 1 Y 1 A ILE 117 ? CG1 ? A ILE 126 CG1 80 1 Y 1 A ILE 117 ? CG2 ? A ILE 126 CG2 81 1 Y 1 A ILE 117 ? CD1 ? A ILE 126 CD1 82 1 Y 1 A GLU 118 ? CG ? A GLU 127 CG 83 1 Y 1 A GLU 118 ? CD ? A GLU 127 CD 84 1 Y 1 A GLU 118 ? OE1 ? A GLU 127 OE1 85 1 Y 1 A GLU 118 ? OE2 ? A GLU 127 OE2 86 1 Y 1 A LYS 129 ? CG ? A LYS 138 CG 87 1 Y 1 A LYS 129 ? CD ? A LYS 138 CD 88 1 Y 1 A LYS 129 ? CE ? A LYS 138 CE 89 1 Y 1 A LYS 129 ? NZ ? A LYS 138 NZ 90 1 Y 1 A LYS 141 ? CE ? A LYS 150 CE 91 1 Y 1 A LYS 141 ? NZ ? A LYS 150 NZ 92 1 Y 1 A ASN 143 ? CG ? A ASN 152 CG 93 1 Y 1 A ASN 143 ? OD1 ? A ASN 152 OD1 94 1 Y 1 A ASN 143 ? ND2 ? A ASN 152 ND2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -8 ? A MET 1 2 1 Y 1 A GLY -7 ? A GLY 2 3 1 Y 1 A SER -6 ? A SER 3 4 1 Y 1 A HIS -5 ? A HIS 4 5 1 Y 1 A HIS -4 ? A HIS 5 6 1 Y 1 A HIS -3 ? A HIS 6 7 1 Y 1 A HIS -2 ? A HIS 7 8 1 Y 1 A HIS -1 ? A HIS 8 9 1 Y 1 A HIS 0 ? A HIS 9 10 1 Y 1 A GLY 1 ? A GLY 10 11 1 Y 1 A SER 2 ? A SER 11 12 1 Y 1 A LEU 119 ? A LEU 128 13 1 Y 1 A ASP 120 ? A ASP 129 14 1 Y 1 A ASN 121 ? A ASN 130 15 1 Y 1 A LYS 122 ? A LYS 131 16 1 Y 1 A GLN 123 ? A GLN 132 17 1 Y 1 A GLY 124 ? A GLY 133 18 1 Y 1 A PHE 125 ? A PHE 134 19 1 Y 1 A VAL 126 ? A VAL 135 20 1 Y 1 A GLY 127 ? A GLY 136 21 1 Y 1 A ASN 128 ? A ASN 137 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 PHE N N N N 233 PHE CA C N S 234 PHE C C N N 235 PHE O O N N 236 PHE CB C N N 237 PHE CG C Y N 238 PHE CD1 C Y N 239 PHE CD2 C Y N 240 PHE CE1 C Y N 241 PHE CE2 C Y N 242 PHE CZ C Y N 243 PHE OXT O N N 244 PHE H H N N 245 PHE H2 H N N 246 PHE HA H N N 247 PHE HB2 H N N 248 PHE HB3 H N N 249 PHE HD1 H N N 250 PHE HD2 H N N 251 PHE HE1 H N N 252 PHE HE2 H N N 253 PHE HZ H N N 254 PHE HXT H N N 255 PRO N N N N 256 PRO CA C N S 257 PRO C C N N 258 PRO O O N N 259 PRO CB C N N 260 PRO CG C N N 261 PRO CD C N N 262 PRO OXT O N N 263 PRO H H N N 264 PRO HA H N N 265 PRO HB2 H N N 266 PRO HB3 H N N 267 PRO HG2 H N N 268 PRO HG3 H N N 269 PRO HD2 H N N 270 PRO HD3 H N N 271 PRO HXT H N N 272 SER N N N N 273 SER CA C N S 274 SER C C N N 275 SER O O N N 276 SER CB C N N 277 SER OG O N N 278 SER OXT O N N 279 SER H H N N 280 SER H2 H N N 281 SER HA H N N 282 SER HB2 H N N 283 SER HB3 H N N 284 SER HG H N N 285 SER HXT H N N 286 THR N N N N 287 THR CA C N S 288 THR C C N N 289 THR O O N N 290 THR CB C N R 291 THR OG1 O N N 292 THR CG2 C N N 293 THR OXT O N N 294 THR H H N N 295 THR H2 H N N 296 THR HA H N N 297 THR HB H N N 298 THR HG1 H N N 299 THR HG21 H N N 300 THR HG22 H N N 301 THR HG23 H N N 302 THR HXT H N N 303 TRP N N N N 304 TRP CA C N S 305 TRP C C N N 306 TRP O O N N 307 TRP CB C N N 308 TRP CG C Y N 309 TRP CD1 C Y N 310 TRP CD2 C Y N 311 TRP NE1 N Y N 312 TRP CE2 C Y N 313 TRP CE3 C Y N 314 TRP CZ2 C Y N 315 TRP CZ3 C Y N 316 TRP CH2 C Y N 317 TRP OXT O N N 318 TRP H H N N 319 TRP H2 H N N 320 TRP HA H N N 321 TRP HB2 H N N 322 TRP HB3 H N N 323 TRP HD1 H N N 324 TRP HE1 H N N 325 TRP HE3 H N N 326 TRP HZ2 H N N 327 TRP HZ3 H N N 328 TRP HH2 H N N 329 TRP HXT H N N 330 TYR N N N N 331 TYR CA C N S 332 TYR C C N N 333 TYR O O N N 334 TYR CB C N N 335 TYR CG C Y N 336 TYR CD1 C Y N 337 TYR CD2 C Y N 338 TYR CE1 C Y N 339 TYR CE2 C Y N 340 TYR CZ C Y N 341 TYR OH O N N 342 TYR OXT O N N 343 TYR H H N N 344 TYR H2 H N N 345 TYR HA H N N 346 TYR HB2 H N N 347 TYR HB3 H N N 348 TYR HD1 H N N 349 TYR HD2 H N N 350 TYR HE1 H N N 351 TYR HE2 H N N 352 TYR HH H N N 353 TYR HXT H N N 354 VAL N N N N 355 VAL CA C N S 356 VAL C C N N 357 VAL O O N N 358 VAL CB C N N 359 VAL CG1 C N N 360 VAL CG2 C N N 361 VAL OXT O N N 362 VAL H H N N 363 VAL H2 H N N 364 VAL HA H N N 365 VAL HB H N N 366 VAL HG11 H N N 367 VAL HG12 H N N 368 VAL HG13 H N N 369 VAL HG21 H N N 370 VAL HG22 H N N 371 VAL HG23 H N N 372 VAL HXT H N N 373 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 PHE N CA sing N N 222 PHE N H sing N N 223 PHE N H2 sing N N 224 PHE CA C sing N N 225 PHE CA CB sing N N 226 PHE CA HA sing N N 227 PHE C O doub N N 228 PHE C OXT sing N N 229 PHE CB CG sing N N 230 PHE CB HB2 sing N N 231 PHE CB HB3 sing N N 232 PHE CG CD1 doub Y N 233 PHE CG CD2 sing Y N 234 PHE CD1 CE1 sing Y N 235 PHE CD1 HD1 sing N N 236 PHE CD2 CE2 doub Y N 237 PHE CD2 HD2 sing N N 238 PHE CE1 CZ doub Y N 239 PHE CE1 HE1 sing N N 240 PHE CE2 CZ sing Y N 241 PHE CE2 HE2 sing N N 242 PHE CZ HZ sing N N 243 PHE OXT HXT sing N N 244 PRO N CA sing N N 245 PRO N CD sing N N 246 PRO N H sing N N 247 PRO CA C sing N N 248 PRO CA CB sing N N 249 PRO CA HA sing N N 250 PRO C O doub N N 251 PRO C OXT sing N N 252 PRO CB CG sing N N 253 PRO CB HB2 sing N N 254 PRO CB HB3 sing N N 255 PRO CG CD sing N N 256 PRO CG HG2 sing N N 257 PRO CG HG3 sing N N 258 PRO CD HD2 sing N N 259 PRO CD HD3 sing N N 260 PRO OXT HXT sing N N 261 SER N CA sing N N 262 SER N H sing N N 263 SER N H2 sing N N 264 SER CA C sing N N 265 SER CA CB sing N N 266 SER CA HA sing N N 267 SER C O doub N N 268 SER C OXT sing N N 269 SER CB OG sing N N 270 SER CB HB2 sing N N 271 SER CB HB3 sing N N 272 SER OG HG sing N N 273 SER OXT HXT sing N N 274 THR N CA sing N N 275 THR N H sing N N 276 THR N H2 sing N N 277 THR CA C sing N N 278 THR CA CB sing N N 279 THR CA HA sing N N 280 THR C O doub N N 281 THR C OXT sing N N 282 THR CB OG1 sing N N 283 THR CB CG2 sing N N 284 THR CB HB sing N N 285 THR OG1 HG1 sing N N 286 THR CG2 HG21 sing N N 287 THR CG2 HG22 sing N N 288 THR CG2 HG23 sing N N 289 THR OXT HXT sing N N 290 TRP N CA sing N N 291 TRP N H sing N N 292 TRP N H2 sing N N 293 TRP CA C sing N N 294 TRP CA CB sing N N 295 TRP CA HA sing N N 296 TRP C O doub N N 297 TRP C OXT sing N N 298 TRP CB CG sing N N 299 TRP CB HB2 sing N N 300 TRP CB HB3 sing N N 301 TRP CG CD1 doub Y N 302 TRP CG CD2 sing Y N 303 TRP CD1 NE1 sing Y N 304 TRP CD1 HD1 sing N N 305 TRP CD2 CE2 doub Y N 306 TRP CD2 CE3 sing Y N 307 TRP NE1 CE2 sing Y N 308 TRP NE1 HE1 sing N N 309 TRP CE2 CZ2 sing Y N 310 TRP CE3 CZ3 doub Y N 311 TRP CE3 HE3 sing N N 312 TRP CZ2 CH2 doub Y N 313 TRP CZ2 HZ2 sing N N 314 TRP CZ3 CH2 sing Y N 315 TRP CZ3 HZ3 sing N N 316 TRP CH2 HH2 sing N N 317 TRP OXT HXT sing N N 318 TYR N CA sing N N 319 TYR N H sing N N 320 TYR N H2 sing N N 321 TYR CA C sing N N 322 TYR CA CB sing N N 323 TYR CA HA sing N N 324 TYR C O doub N N 325 TYR C OXT sing N N 326 TYR CB CG sing N N 327 TYR CB HB2 sing N N 328 TYR CB HB3 sing N N 329 TYR CG CD1 doub Y N 330 TYR CG CD2 sing Y N 331 TYR CD1 CE1 sing Y N 332 TYR CD1 HD1 sing N N 333 TYR CD2 CE2 doub Y N 334 TYR CD2 HD2 sing N N 335 TYR CE1 CZ doub Y N 336 TYR CE1 HE1 sing N N 337 TYR CE2 CZ sing Y N 338 TYR CE2 HE2 sing N N 339 TYR CZ OH sing N N 340 TYR OH HH sing N N 341 TYR OXT HXT sing N N 342 VAL N CA sing N N 343 VAL N H sing N N 344 VAL N H2 sing N N 345 VAL CA C sing N N 346 VAL CA CB sing N N 347 VAL CA HA sing N N 348 VAL C O doub N N 349 VAL C OXT sing N N 350 VAL CB CG1 sing N N 351 VAL CB CG2 sing N N 352 VAL CB HB sing N N 353 VAL CG1 HG11 sing N N 354 VAL CG1 HG12 sing N N 355 VAL CG1 HG13 sing N N 356 VAL CG2 HG21 sing N N 357 VAL CG2 HG22 sing N N 358 VAL CG2 HG23 sing N N 359 VAL OXT HXT sing N N 360 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2AXW _pdbx_initial_refinement_model.details 'PDB ENTRY 2AXW' #