HEADER TRANSPORT PROTEIN, MEMBRANE PROTEIN 09-NOV-11 3UKN TITLE STRUCTURE OF THE C-LINKER/CNBHD OF ZELK CHANNELS IN C 2 2 21 SPACE TITLE 2 GROUP COMPND MOL_ID: 1; COMPND 2 MOLECULE: NOVEL PROTEIN SIMILAR TO VERTEBRATE POTASSIUM VOLTAGE-GATED COMPND 3 CHANNEL, SUBFAMILY H (EAG-RELATED) FAMILY; COMPND 4 CHAIN: A, B, C; COMPND 5 FRAGMENT: UNP RESIDUES 543-750; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 3 ORGANISM_COMMON: LEOPARD DANIO,ZEBRA DANIO,ZEBRA FISH; SOURCE 4 ORGANISM_TAXID: 7955; SOURCE 5 GENE: CH211-11O22.2-001, ELK, KCNH3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMALC2T KEYWDS KCNH, ELK, ERG, EAG, CNBD, CNBHD, C-LINKER, ION CHANNEL, CYCLIC KEYWDS 2 NUCLEOTIDE, CYCLIC NUCLEOTIDE-BINDING DOMAIN, ION TRANSPORT, KEYWDS 3 TRANSPORT PROTEIN, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.I.BRELIDZE REVDAT 6 03-APR-24 3UKN 1 REMARK REVDAT 5 28-FEB-24 3UKN 1 SEQADV REVDAT 4 06-JUN-12 3UKN 1 JRNL REVDAT 3 01-FEB-12 3UKN 1 JRNL REVDAT 2 25-JAN-12 3UKN 1 JRNL REVDAT 1 04-JAN-12 3UKN 0 JRNL AUTH T.I.BRELIDZE,A.E.CARLSON,B.SANKARAN,W.N.ZAGOTTA JRNL TITL STRUCTURE OF THE CARBOXY-TERMINAL REGION OF A KCNH CHANNEL. JRNL REF NATURE V. 481 530 2012 JRNL REFN ISSN 0028-0836 JRNL PMID 22230959 JRNL DOI 10.1038/NATURE10735 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 33676 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1676 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.5708 - 4.7385 1.00 3451 181 0.2038 0.2341 REMARK 3 2 4.7385 - 3.7615 1.00 3328 170 0.1599 0.2088 REMARK 3 3 3.7615 - 3.2861 1.00 3279 172 0.1972 0.2207 REMARK 3 4 3.2861 - 2.9857 1.00 3274 184 0.1945 0.2245 REMARK 3 5 2.9857 - 2.7717 1.00 3259 162 0.2143 0.2705 REMARK 3 6 2.7717 - 2.6083 1.00 3264 171 0.2333 0.3096 REMARK 3 7 2.6083 - 2.4777 1.00 3250 167 0.2431 0.3352 REMARK 3 8 2.4777 - 2.3699 1.00 3226 175 0.2606 0.3101 REMARK 3 9 2.3699 - 2.2786 0.95 3075 156 0.2911 0.3439 REMARK 3 10 2.2786 - 2.2000 0.81 2594 138 0.4535 0.4518 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 48.13 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.41070 REMARK 3 B22 (A**2) : -1.07990 REMARK 3 B33 (A**2) : 5.49070 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4462 REMARK 3 ANGLE : 1.092 6045 REMARK 3 CHIRALITY : 0.073 729 REMARK 3 PLANARITY : 0.004 760 REMARK 3 DIHEDRAL : 12.525 1601 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 549:640 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.3449 32.8671 18.3722 REMARK 3 T TENSOR REMARK 3 T11: 0.1209 T22: 0.0615 REMARK 3 T33: 0.0735 T12: -0.0031 REMARK 3 T13: 0.0208 T23: 0.0296 REMARK 3 L TENSOR REMARK 3 L11: 1.3711 L22: 1.6603 REMARK 3 L33: 0.6429 L12: 1.3261 REMARK 3 L13: 0.4404 L23: 1.1686 REMARK 3 S TENSOR REMARK 3 S11: 0.0933 S12: -0.1642 S13: 0.1268 REMARK 3 S21: 0.0670 S22: -0.1375 S23: 0.1942 REMARK 3 S31: 0.0711 S32: -0.0560 S33: 0.0017 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 641:712 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1250 34.6704 5.5205 REMARK 3 T TENSOR REMARK 3 T11: 0.0850 T22: 0.0633 REMARK 3 T33: 0.1865 T12: -0.0067 REMARK 3 T13: 0.0233 T23: 0.0605 REMARK 3 L TENSOR REMARK 3 L11: 0.0650 L22: 1.1306 REMARK 3 L33: 0.6533 L12: -0.3718 REMARK 3 L13: 0.3275 L23: -0.1844 REMARK 3 S TENSOR REMARK 3 S11: 0.0371 S12: 0.0457 S13: -0.1054 REMARK 3 S21: -0.1803 S22: -0.0977 S23: 0.0341 REMARK 3 S31: 0.0667 S32: 0.1072 S33: 0.0510 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 713:744 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0535 21.1691 2.4858 REMARK 3 T TENSOR REMARK 3 T11: 0.1775 T22: 0.1012 REMARK 3 T33: 0.2245 T12: 0.0521 REMARK 3 T13: 0.0074 T23: -0.0163 REMARK 3 L TENSOR REMARK 3 L11: 0.8482 L22: 0.8597 REMARK 3 L33: 0.0074 L12: -1.1987 REMARK 3 L13: -0.2077 L23: -0.2601 REMARK 3 S TENSOR REMARK 3 S11: 0.1647 S12: 0.0460 S13: -0.2130 REMARK 3 S21: -0.2017 S22: -0.0732 S23: -0.0129 REMARK 3 S31: -0.0348 S32: 0.0263 S33: -0.0826 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN B AND RESID 548:640 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4747 39.3175 23.5068 REMARK 3 T TENSOR REMARK 3 T11: 0.1378 T22: 0.1835 REMARK 3 T33: 0.0925 T12: 0.0041 REMARK 3 T13: 0.0171 T23: -0.0240 REMARK 3 L TENSOR REMARK 3 L11: 2.4808 L22: 1.1088 REMARK 3 L33: 0.0106 L12: 0.9340 REMARK 3 L13: 0.5237 L23: 0.6853 REMARK 3 S TENSOR REMARK 3 S11: 0.2666 S12: -0.3624 S13: 0.3207 REMARK 3 S21: 0.2583 S22: -0.2174 S23: 0.0579 REMARK 3 S31: -0.0555 S32: -0.0804 S33: -0.0398 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN B AND RESID 641:712 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.8658 34.0494 28.0230 REMARK 3 T TENSOR REMARK 3 T11: 0.1685 T22: 0.2825 REMARK 3 T33: 0.1359 T12: -0.0351 REMARK 3 T13: 0.0076 T23: 0.0523 REMARK 3 L TENSOR REMARK 3 L11: 2.0854 L22: 1.8830 REMARK 3 L33: 0.3746 L12: 0.5462 REMARK 3 L13: 0.0521 L23: -0.6802 REMARK 3 S TENSOR REMARK 3 S11: 0.1560 S12: -0.4740 S13: -0.0558 REMARK 3 S21: -0.0655 S22: -0.2841 S23: -0.0806 REMARK 3 S31: 0.1169 S32: 0.1557 S33: 0.0791 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN B AND RESID 713:745 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.9844 40.2447 13.8231 REMARK 3 T TENSOR REMARK 3 T11: 0.2060 T22: 0.1463 REMARK 3 T33: 0.1280 T12: 0.0214 REMARK 3 T13: 0.0409 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 1.5234 L22: 2.7006 REMARK 3 L33: 1.1699 L12: 0.7528 REMARK 3 L13: -0.4402 L23: -0.7310 REMARK 3 S TENSOR REMARK 3 S11: -0.4194 S12: 0.0260 S13: 0.0226 REMARK 3 S21: -0.4114 S22: 0.0708 S23: -0.1932 REMARK 3 S31: 0.0843 S32: 0.0464 S33: 0.3012 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN C AND RESID 549:640 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.9033 38.4186 53.7480 REMARK 3 T TENSOR REMARK 3 T11: 0.0652 T22: 0.5202 REMARK 3 T33: 0.0881 T12: 0.0025 REMARK 3 T13: 0.1000 T23: 0.0153 REMARK 3 L TENSOR REMARK 3 L11: 0.1753 L22: 0.5439 REMARK 3 L33: 2.2159 L12: -0.6167 REMARK 3 L13: 0.1764 L23: -0.3501 REMARK 3 S TENSOR REMARK 3 S11: -0.4416 S12: 0.0569 S13: 0.1466 REMARK 3 S21: -0.0204 S22: 0.3444 S23: -0.2077 REMARK 3 S31: 0.1893 S32: -0.3675 S33: -0.0316 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN C AND RESID 641:712 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.8718 43.0011 48.3555 REMARK 3 T TENSOR REMARK 3 T11: 0.1056 T22: 1.0940 REMARK 3 T33: 0.1497 T12: 0.0892 REMARK 3 T13: 0.0074 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.5703 L22: 2.2356 REMARK 3 L33: 4.2101 L12: -0.1867 REMARK 3 L13: -1.1947 L23: 0.1046 REMARK 3 S TENSOR REMARK 3 S11: -0.0910 S12: 0.5224 S13: 0.0089 REMARK 3 S21: 0.0315 S22: 0.0610 S23: 0.3079 REMARK 3 S31: 0.0291 S32: -2.1610 S33: -0.0155 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN C AND RESID 713:743 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.4124 54.0118 42.5880 REMARK 3 T TENSOR REMARK 3 T11: 0.5255 T22: 0.4534 REMARK 3 T33: 0.6444 T12: 0.0393 REMARK 3 T13: -0.0962 T23: 0.2691 REMARK 3 L TENSOR REMARK 3 L11: 1.9686 L22: 1.3173 REMARK 3 L33: 6.2744 L12: -1.0054 REMARK 3 L13: 2.6616 L23: -1.3062 REMARK 3 S TENSOR REMARK 3 S11: -0.4200 S12: -0.0053 S13: -0.1787 REMARK 3 S21: -0.4513 S22: -0.2629 S23: -0.1968 REMARK 3 S31: -1.2089 S32: -0.2802 S33: 0.2673 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3UKN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000068873. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33782 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 49.560 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.43400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: STRUCTURE OF THE CORRESPONDING SELENOMETHIONINE REMARK 200 DERIVATIVE CRYSTAL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8 M NON-DETERGENT SULFOBETAINE REMARK 280 (NDSB)-211, 180 MM AMMONIUM ACETATE, 22.5% (W/V) PEG 3350, 90 MM REMARK 280 TRIS , PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 120.62000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 120.62000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 28.99000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.74000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 28.99000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.74000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 120.62000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 28.99000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 47.74000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 120.62000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 28.99000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 47.74000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 120.62000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 539 REMARK 465 ALA A 540 REMARK 465 MET A 541 REMARK 465 ASP A 542 REMARK 465 GLN A 543 REMARK 465 ARG A 544 REMARK 465 MET A 545 REMARK 465 TYR A 546 REMARK 465 SER A 547 REMARK 465 ARG A 548 REMARK 465 GLY A 745 REMARK 465 SER A 746 REMARK 465 GLY A 747 REMARK 465 ALA A 748 REMARK 465 ASP A 749 REMARK 465 LEU A 750 REMARK 465 GLY B 539 REMARK 465 ALA B 540 REMARK 465 MET B 541 REMARK 465 ASP B 542 REMARK 465 GLN B 543 REMARK 465 ARG B 544 REMARK 465 MET B 545 REMARK 465 TYR B 546 REMARK 465 SER B 547 REMARK 465 SER B 746 REMARK 465 GLY B 747 REMARK 465 ALA B 748 REMARK 465 ASP B 749 REMARK 465 LEU B 750 REMARK 465 GLY C 539 REMARK 465 ALA C 540 REMARK 465 MET C 541 REMARK 465 ASP C 542 REMARK 465 GLN C 543 REMARK 465 ARG C 544 REMARK 465 MET C 545 REMARK 465 TYR C 546 REMARK 465 SER C 547 REMARK 465 ARG C 548 REMARK 465 ASP C 670 REMARK 465 ASN C 671 REMARK 465 THR C 672 REMARK 465 LYS C 690 REMARK 465 GLU C 691 REMARK 465 PHE C 730 REMARK 465 VAL C 731 REMARK 465 SER C 732 REMARK 465 GLU C 733 REMARK 465 GLU C 744 REMARK 465 GLY C 745 REMARK 465 SER C 746 REMARK 465 GLY C 747 REMARK 465 ALA C 748 REMARK 465 ASP C 749 REMARK 465 LEU C 750 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 549 N CB CG CD NE CZ NH1 REMARK 470 ARG A 549 NH2 REMARK 470 LYS A 557 CG CD CE NZ REMARK 470 ARG A 567 CD NE CZ NH1 NH2 REMARK 470 LYS A 597 CE NZ REMARK 470 GLU A 602 CG CD OE1 OE2 REMARK 470 PHE A 640 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE A 683 CD1 REMARK 470 LYS A 690 CG CD CE NZ REMARK 470 LYS A 695 CG CD CE NZ REMARK 470 ARG A 721 NE CZ NH1 NH2 REMARK 470 LYS A 729 CE NZ REMARK 470 GLN A 735 CD OE1 NE2 REMARK 470 ARG A 743 NH1 NH2 REMARK 470 ARG B 548 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 549 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 555 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 567 NE CZ NH1 NH2 REMARK 470 LYS B 570 CG CD CE NZ REMARK 470 GLU B 602 CG CD OE1 OE2 REMARK 470 ASN B 612 CG OD1 ND2 REMARK 470 LYS B 669 CE NZ REMARK 470 ASP B 670 CG OD1 OD2 REMARK 470 ASN B 671 CG OD1 ND2 REMARK 470 LYS B 679 NZ REMARK 470 GLU B 691 CG CD OE1 OE2 REMARK 470 GLN B 692 CG CD OE1 NE2 REMARK 470 LYS B 695 CG CD CE NZ REMARK 470 ARG C 549 CG CD NE CZ NH1 NH2 REMARK 470 HIS C 553 CG ND1 CD2 CE1 NE2 REMARK 470 LYS C 557 CD CE NZ REMARK 470 ARG C 567 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 570 CG CD CE NZ REMARK 470 GLN C 574 CD NE2 REMARK 470 LEU C 577 CD1 CD2 REMARK 470 GLU C 578 CD OE1 OE2 REMARK 470 GLN C 581 OE1 NE2 REMARK 470 LYS C 597 CG CD CE NZ REMARK 470 GLU C 602 CG CD OE1 OE2 REMARK 470 LEU C 618 CD1 CD2 REMARK 470 ARG C 626 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 630 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 637 CE NZ REMARK 470 PHE C 640 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP C 652 OD1 OD2 REMARK 470 LEU C 668 CG CD1 CD2 REMARK 470 LYS C 669 CG CD CE NZ REMARK 470 LEU C 674 CD1 CD2 REMARK 470 ASP C 686 OD1 OD2 REMARK 470 THR C 689 OG1 CG2 REMARK 470 GLN C 692 CG CD OE1 NE2 REMARK 470 VAL C 693 CG1 CG2 REMARK 470 LYS C 695 CD CE NZ REMARK 470 ASN C 699 OD1 ND2 REMARK 470 ASP C 707 CG OD1 OD2 REMARK 470 LYS C 714 CG CD CE NZ REMARK 470 ARG C 717 NE CZ NH1 NH2 REMARK 470 GLU C 718 CG CD OE1 OE2 REMARK 470 LEU C 720 CG CD1 CD2 REMARK 470 ARG C 721 CG CD NE CZ NH1 NH2 REMARK 470 LEU C 722 CG CD1 CD2 REMARK 470 GLU C 725 CG CD OE1 OE2 REMARK 470 LYS C 729 NZ REMARK 470 ILE C 734 CG1 CG2 CD1 REMARK 470 GLN C 735 CG CD OE1 NE2 REMARK 470 HIS C 736 CG ND1 CD2 CE1 NE2 REMARK 470 ASP C 737 CG OD1 OD2 REMARK 470 ARG C 743 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 160 O HOH C 243 1.90 REMARK 500 O HOH A 253 O HOH B 257 1.94 REMARK 500 O HOH A 7 O HOH A 193 1.98 REMARK 500 O HOH A 148 O HOH A 149 2.01 REMARK 500 O HOH B 278 O HOH B 282 2.04 REMARK 500 O HOH C 219 O HOH C 224 2.04 REMARK 500 O HOH A 33 O HOH A 320 2.05 REMARK 500 O HOH C 161 O HOH C 177 2.06 REMARK 500 O HOH A 178 O HOH B 53 2.06 REMARK 500 OE1 GLN A 728 O HOH A 174 2.13 REMARK 500 OD1 ASP B 558 O HOH B 280 2.15 REMARK 500 O LEU B 595 O HOH B 206 2.15 REMARK 500 O HOH A 105 O HOH A 274 2.16 REMARK 500 O HOH A 128 O HOH B 127 2.17 REMARK 500 O HOH B 156 O HOH B 311 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 669 -78.15 -104.69 REMARK 500 ASP A 670 56.59 -110.97 REMARK 500 ASP B 670 -129.24 58.11 REMARK 500 ASN B 671 45.22 -109.97 REMARK 500 SER B 687 64.12 -116.59 REMARK 500 LYS B 690 -81.19 -57.24 REMARK 500 GLN B 692 -96.98 -143.32 REMARK 500 LEU C 618 151.17 -47.67 REMARK 500 PRO C 643 -11.58 -47.77 REMARK 500 LEU C 674 -12.34 -150.55 REMARK 500 ALA C 675 158.25 176.88 REMARK 500 LYS C 679 -25.31 -39.13 REMARK 500 ASP C 686 -74.43 -86.66 REMARK 500 SER C 687 94.65 -66.97 REMARK 500 LEU C 688 40.29 -105.69 REMARK 500 VAL C 693 -139.33 63.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3UK5 RELATED DB: PDB REMARK 900 RELATED ID: 3UKT RELATED DB: PDB REMARK 900 RELATED ID: 3UKV RELATED DB: PDB DBREF 3UKN A 543 750 UNP A8WHX9 A8WHX9_DANRE 543 750 DBREF 3UKN B 543 750 UNP A8WHX9 A8WHX9_DANRE 543 750 DBREF 3UKN C 543 750 UNP A8WHX9 A8WHX9_DANRE 543 750 SEQADV 3UKN GLY A 539 UNP A8WHX9 EXPRESSION TAG SEQADV 3UKN ALA A 540 UNP A8WHX9 EXPRESSION TAG SEQADV 3UKN MET A 541 UNP A8WHX9 EXPRESSION TAG SEQADV 3UKN ASP A 542 UNP A8WHX9 EXPRESSION TAG SEQADV 3UKN GLY B 539 UNP A8WHX9 EXPRESSION TAG SEQADV 3UKN ALA B 540 UNP A8WHX9 EXPRESSION TAG SEQADV 3UKN MET B 541 UNP A8WHX9 EXPRESSION TAG SEQADV 3UKN ASP B 542 UNP A8WHX9 EXPRESSION TAG SEQADV 3UKN GLY C 539 UNP A8WHX9 EXPRESSION TAG SEQADV 3UKN ALA C 540 UNP A8WHX9 EXPRESSION TAG SEQADV 3UKN MET C 541 UNP A8WHX9 EXPRESSION TAG SEQADV 3UKN ASP C 542 UNP A8WHX9 EXPRESSION TAG SEQRES 1 A 212 GLY ALA MET ASP GLN ARG MET TYR SER ARG ARG SER LEU SEQRES 2 A 212 TYR HIS THR ARG THR LYS ASP LEU LYS ASP PHE ILE ARG SEQRES 3 A 212 VAL HIS ARG LEU PRO LYS ALA LEU ALA GLN ARG MET LEU SEQRES 4 A 212 GLU CYS PHE GLN THR THR TRP SER VAL ASN ASN GLY ILE SEQRES 5 A 212 ASP VAL SER GLU LEU LEU LYS ASP PHE PRO ASP GLU LEU SEQRES 6 A 212 ARG ALA ASP ILE ALA MET HIS LEU ASN LYS GLU LEU LEU SEQRES 7 A 212 GLN LEU PRO LEU PHE GLU SER ALA SER ARG GLY CYS LEU SEQRES 8 A 212 ARG SER LEU SER LEU ILE ILE LYS THR SER PHE CYS ALA SEQRES 9 A 212 PRO GLY GLU PHE LEU ILE ARG GLN GLY ASP ALA LEU GLN SEQRES 10 A 212 ALA ILE TYR PHE VAL CYS SER GLY SER MET GLU VAL LEU SEQRES 11 A 212 LYS ASP ASN THR VAL LEU ALA ILE LEU GLY LYS GLY ASP SEQRES 12 A 212 LEU ILE GLY SER ASP SER LEU THR LYS GLU GLN VAL ILE SEQRES 13 A 212 LYS THR ASN ALA ASN VAL LYS ALA LEU THR TYR CYS ASP SEQRES 14 A 212 LEU GLN TYR ILE SER LEU LYS GLY LEU ARG GLU VAL LEU SEQRES 15 A 212 ARG LEU TYR PRO GLU TYR ALA GLN LYS PHE VAL SER GLU SEQRES 16 A 212 ILE GLN HIS ASP LEU THR TYR ASN LEU ARG GLU GLY SER SEQRES 17 A 212 GLY ALA ASP LEU SEQRES 1 B 212 GLY ALA MET ASP GLN ARG MET TYR SER ARG ARG SER LEU SEQRES 2 B 212 TYR HIS THR ARG THR LYS ASP LEU LYS ASP PHE ILE ARG SEQRES 3 B 212 VAL HIS ARG LEU PRO LYS ALA LEU ALA GLN ARG MET LEU SEQRES 4 B 212 GLU CYS PHE GLN THR THR TRP SER VAL ASN ASN GLY ILE SEQRES 5 B 212 ASP VAL SER GLU LEU LEU LYS ASP PHE PRO ASP GLU LEU SEQRES 6 B 212 ARG ALA ASP ILE ALA MET HIS LEU ASN LYS GLU LEU LEU SEQRES 7 B 212 GLN LEU PRO LEU PHE GLU SER ALA SER ARG GLY CYS LEU SEQRES 8 B 212 ARG SER LEU SER LEU ILE ILE LYS THR SER PHE CYS ALA SEQRES 9 B 212 PRO GLY GLU PHE LEU ILE ARG GLN GLY ASP ALA LEU GLN SEQRES 10 B 212 ALA ILE TYR PHE VAL CYS SER GLY SER MET GLU VAL LEU SEQRES 11 B 212 LYS ASP ASN THR VAL LEU ALA ILE LEU GLY LYS GLY ASP SEQRES 12 B 212 LEU ILE GLY SER ASP SER LEU THR LYS GLU GLN VAL ILE SEQRES 13 B 212 LYS THR ASN ALA ASN VAL LYS ALA LEU THR TYR CYS ASP SEQRES 14 B 212 LEU GLN TYR ILE SER LEU LYS GLY LEU ARG GLU VAL LEU SEQRES 15 B 212 ARG LEU TYR PRO GLU TYR ALA GLN LYS PHE VAL SER GLU SEQRES 16 B 212 ILE GLN HIS ASP LEU THR TYR ASN LEU ARG GLU GLY SER SEQRES 17 B 212 GLY ALA ASP LEU SEQRES 1 C 212 GLY ALA MET ASP GLN ARG MET TYR SER ARG ARG SER LEU SEQRES 2 C 212 TYR HIS THR ARG THR LYS ASP LEU LYS ASP PHE ILE ARG SEQRES 3 C 212 VAL HIS ARG LEU PRO LYS ALA LEU ALA GLN ARG MET LEU SEQRES 4 C 212 GLU CYS PHE GLN THR THR TRP SER VAL ASN ASN GLY ILE SEQRES 5 C 212 ASP VAL SER GLU LEU LEU LYS ASP PHE PRO ASP GLU LEU SEQRES 6 C 212 ARG ALA ASP ILE ALA MET HIS LEU ASN LYS GLU LEU LEU SEQRES 7 C 212 GLN LEU PRO LEU PHE GLU SER ALA SER ARG GLY CYS LEU SEQRES 8 C 212 ARG SER LEU SER LEU ILE ILE LYS THR SER PHE CYS ALA SEQRES 9 C 212 PRO GLY GLU PHE LEU ILE ARG GLN GLY ASP ALA LEU GLN SEQRES 10 C 212 ALA ILE TYR PHE VAL CYS SER GLY SER MET GLU VAL LEU SEQRES 11 C 212 LYS ASP ASN THR VAL LEU ALA ILE LEU GLY LYS GLY ASP SEQRES 12 C 212 LEU ILE GLY SER ASP SER LEU THR LYS GLU GLN VAL ILE SEQRES 13 C 212 LYS THR ASN ALA ASN VAL LYS ALA LEU THR TYR CYS ASP SEQRES 14 C 212 LEU GLN TYR ILE SER LEU LYS GLY LEU ARG GLU VAL LEU SEQRES 15 C 212 ARG LEU TYR PRO GLU TYR ALA GLN LYS PHE VAL SER GLU SEQRES 16 C 212 ILE GLN HIS ASP LEU THR TYR ASN LEU ARG GLU GLY SER SEQRES 17 C 212 GLY ALA ASP LEU FORMUL 4 HOH *330(H2 O) HELIX 1 1 SER A 550 HIS A 566 1 17 HELIX 2 2 PRO A 569 TRP A 584 1 16 HELIX 3 3 VAL A 586 ILE A 590 5 5 HELIX 4 4 PRO A 600 MET A 609 1 10 HELIX 5 5 LYS A 613 GLU A 622 5 10 HELIX 6 6 SER A 625 ILE A 636 1 12 HELIX 7 7 LEU A 713 TYR A 723 1 11 HELIX 8 8 TYR A 723 ASP A 737 1 15 HELIX 9 9 SER B 550 HIS B 566 1 17 HELIX 10 10 PRO B 569 TRP B 584 1 16 HELIX 11 11 VAL B 586 ILE B 590 5 5 HELIX 12 12 PRO B 600 HIS B 610 1 11 HELIX 13 13 LYS B 613 GLU B 622 5 10 HELIX 14 14 SER B 625 ILE B 635 1 11 HELIX 15 15 LEU B 713 TYR B 723 1 11 HELIX 16 16 TYR B 723 ASP B 737 1 15 HELIX 17 17 SER C 550 HIS C 566 1 17 HELIX 18 18 PRO C 569 TRP C 584 1 16 HELIX 19 19 VAL C 586 ILE C 590 5 5 HELIX 20 20 PRO C 600 MET C 609 1 10 HELIX 21 21 LYS C 613 GLU C 622 5 10 HELIX 22 22 CYS C 628 LEU C 634 1 7 HELIX 23 23 LEU C 713 TYR C 723 1 11 HELIX 24 24 TYR C 723 LYS C 729 1 7 SHEET 1 A 5 LYS A 637 CYS A 641 0 SHEET 2 A 5 CYS A 706 SER A 712 -1 O CYS A 706 N CYS A 641 SHEET 3 A 5 ALA A 656 SER A 662 -1 N PHE A 659 O GLN A 709 SHEET 4 A 5 LEU A 682 GLY A 684 -1 O ILE A 683 N TYR A 658 SHEET 5 A 5 LEU A 738 ASN A 741 1 O THR A 739 N LEU A 682 SHEET 1 B 4 PHE A 646 ILE A 648 0 SHEET 2 B 4 ASN A 699 ALA A 702 -1 O VAL A 700 N ILE A 648 SHEET 3 B 4 MET A 665 LEU A 668 -1 N GLU A 666 O LYS A 701 SHEET 4 B 4 VAL A 673 LEU A 677 -1 O LEU A 674 N VAL A 667 SHEET 1 C 5 LYS B 637 CYS B 641 0 SHEET 2 C 5 CYS B 706 SER B 712 -1 O TYR B 710 N LYS B 637 SHEET 3 C 5 ALA B 656 SER B 662 -1 N PHE B 659 O GLN B 709 SHEET 4 C 5 LEU B 682 GLY B 684 -1 O ILE B 683 N TYR B 658 SHEET 5 C 5 LEU B 738 ASN B 741 1 O TYR B 740 N GLY B 684 SHEET 1 D 4 PHE B 646 ILE B 648 0 SHEET 2 D 4 ASN B 699 ALA B 702 -1 O VAL B 700 N LEU B 647 SHEET 3 D 4 MET B 665 LYS B 669 -1 N LEU B 668 O ASN B 699 SHEET 4 D 4 THR B 672 LEU B 677 -1 O LEU B 677 N MET B 665 SHEET 1 E 5 LYS C 637 CYS C 641 0 SHEET 2 E 5 CYS C 706 SER C 712 -1 O CYS C 706 N CYS C 641 SHEET 3 E 5 ALA C 656 VAL C 660 -1 N PHE C 659 O GLN C 709 SHEET 4 E 5 LEU C 682 GLY C 684 -1 O ILE C 683 N TYR C 658 SHEET 5 E 5 TYR C 740 ASN C 741 1 O TYR C 740 N LEU C 682 SHEET 1 F 4 PHE C 646 ILE C 648 0 SHEET 2 F 4 ASN C 699 ALA C 702 -1 O VAL C 700 N LEU C 647 SHEET 3 F 4 MET C 665 LEU C 668 -1 N LEU C 668 O ASN C 699 SHEET 4 F 4 ALA C 675 LEU C 677 -1 O LEU C 677 N MET C 665 CISPEP 1 LYS B 690 GLU B 691 0 1.52 CISPEP 2 GLN C 692 VAL C 693 0 -8.83 CRYST1 57.980 95.480 241.240 90.00 90.00 90.00 C 2 2 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017247 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010473 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004145 0.00000