HEADER MEMBRANE PROTEIN 10-NOV-11 3ULB TITLE CRYSTAL STRUCTURE OF THE PLECKSTRIN HOMOLOGY DOMAIN OF SACCHAROMYCES TITLE 2 CEREVISIAE AVO1, A TORC2 SUBUNIT, IN THE P212121 CRYSTAL FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: TARGET OF RAPAMYCIN COMPLEX 2 SUBUNIT AVO1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: PH DOMAIN, RESIDUES 1056-1176; COMPND 5 SYNONYM: TORC2 SUBUNIT AVO1, ADHERES VORACIOUSLY TO TOR2 PROTEIN 1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: S288C; SOURCE 6 GENE: AVO1; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PH DOMAIN, MEMBRANE LOCALIZATION, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.PAN,Y.MATSUURA REVDAT 4 01-NOV-23 3ULB 1 REMARK REVDAT 3 08-NOV-17 3ULB 1 REMARK REVDAT 2 14-AUG-13 3ULB 1 JRNL REVDAT 1 11-APR-12 3ULB 0 JRNL AUTH D.PAN,Y.MATSUURA JRNL TITL STRUCTURES OF THE PLECKSTRIN HOMOLOGY DOMAIN OF JRNL TITL 2 SACCHAROMYCES CEREVISIAE AVO1 AND ITS HUMAN ORTHOLOGUE SIN1, JRNL TITL 3 AN ESSENTIAL SUBUNIT OF TOR COMPLEX 2 JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 68 386 2012 JRNL REFN ESSN 1744-3091 JRNL PMID 22505404 JRNL DOI 10.1107/S1744309112007178 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.29 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 22445 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1123 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1346 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.3130 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.3480 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1644 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 116 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02000 REMARK 3 B22 (A**2) : 0.10000 REMARK 3 B33 (A**2) : -0.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.152 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.111 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.901 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1677 ; 0.020 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2259 ; 1.937 ; 1.938 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 195 ; 7.526 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 83 ;34.613 ;22.771 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 306 ;17.621 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;20.439 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 249 ; 0.152 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1249 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1066 A 1069 REMARK 3 ORIGIN FOR THE GROUP (A): 33.1320 37.9860 -17.8250 REMARK 3 T TENSOR REMARK 3 T11: 0.1788 T22: 0.8408 REMARK 3 T33: 0.4309 T12: -0.2520 REMARK 3 T13: 0.1371 T23: -0.0448 REMARK 3 L TENSOR REMARK 3 L11: 10.2072 L22: 9.1396 REMARK 3 L33: 8.4738 L12: 9.6552 REMARK 3 L13: -9.2858 L23: -8.7715 REMARK 3 S TENSOR REMARK 3 S11: 0.2606 S12: 0.8458 S13: 1.3995 REMARK 3 S21: 0.1329 S22: 0.9675 S23: 1.3107 REMARK 3 S31: -0.1966 S32: -0.6364 S33: -1.2281 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1070 A 1075 REMARK 3 ORIGIN FOR THE GROUP (A): 26.7580 34.8610 -3.4060 REMARK 3 T TENSOR REMARK 3 T11: 0.1037 T22: 0.1053 REMARK 3 T33: 0.0994 T12: -0.0050 REMARK 3 T13: 0.0741 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 5.1278 L22: 7.5835 REMARK 3 L33: 5.5163 L12: 2.8928 REMARK 3 L13: 0.9858 L23: -1.7984 REMARK 3 S TENSOR REMARK 3 S11: 0.2264 S12: -0.5865 S13: 0.3774 REMARK 3 S21: 0.2542 S22: -0.3698 S23: 0.3162 REMARK 3 S31: -0.1192 S32: -0.3376 S33: 0.1434 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1076 A 1082 REMARK 3 ORIGIN FOR THE GROUP (A): 21.4080 32.4920 15.5910 REMARK 3 T TENSOR REMARK 3 T11: 0.3283 T22: 0.3909 REMARK 3 T33: 0.3109 T12: -0.1024 REMARK 3 T13: -0.0230 T23: 0.0439 REMARK 3 L TENSOR REMARK 3 L11: 6.2480 L22: 2.6917 REMARK 3 L33: 49.0936 L12: -2.8915 REMARK 3 L13: -17.1654 L23: 7.2308 REMARK 3 S TENSOR REMARK 3 S11: -0.0677 S12: 0.1520 S13: 0.0277 REMARK 3 S21: -0.3014 S22: -0.3810 S23: 0.0117 REMARK 3 S31: -0.1416 S32: 0.0361 S33: 0.4487 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1083 A 1098 REMARK 3 ORIGIN FOR THE GROUP (A): 4.8980 32.8060 32.9770 REMARK 3 T TENSOR REMARK 3 T11: 0.0759 T22: 0.0751 REMARK 3 T33: 0.1500 T12: 0.0048 REMARK 3 T13: 0.0573 T23: -0.0546 REMARK 3 L TENSOR REMARK 3 L11: 7.5743 L22: 7.4062 REMARK 3 L33: 4.6264 L12: 3.0712 REMARK 3 L13: -5.1736 L23: -1.0255 REMARK 3 S TENSOR REMARK 3 S11: 0.1248 S12: -0.1806 S13: 0.1918 REMARK 3 S21: 0.0544 S22: 0.0550 S23: 0.2481 REMARK 3 S31: -0.0759 S32: 0.0316 S33: -0.1798 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1099 A 1113 REMARK 3 ORIGIN FOR THE GROUP (A): 3.3680 37.9470 24.9850 REMARK 3 T TENSOR REMARK 3 T11: 0.4009 T22: 0.1609 REMARK 3 T33: 0.4341 T12: 0.0435 REMARK 3 T13: 0.0978 T23: 0.1186 REMARK 3 L TENSOR REMARK 3 L11: 12.1220 L22: 40.9303 REMARK 3 L33: 8.9836 L12: 8.4957 REMARK 3 L13: -6.3142 L23: -18.5292 REMARK 3 S TENSOR REMARK 3 S11: -0.2043 S12: 1.2161 S13: 1.0939 REMARK 3 S21: -2.1786 S22: 0.6949 S23: 0.2056 REMARK 3 S31: 0.9235 S32: -0.6120 S33: -0.4906 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1114 A 1136 REMARK 3 ORIGIN FOR THE GROUP (A): 11.5760 22.3600 30.9290 REMARK 3 T TENSOR REMARK 3 T11: 0.1243 T22: 0.0706 REMARK 3 T33: 0.1216 T12: -0.0107 REMARK 3 T13: 0.0002 T23: -0.0121 REMARK 3 L TENSOR REMARK 3 L11: 8.9816 L22: 4.4859 REMARK 3 L33: 3.0129 L12: 1.6515 REMARK 3 L13: -3.3471 L23: -1.5741 REMARK 3 S TENSOR REMARK 3 S11: 0.1895 S12: -0.4079 S13: -0.7297 REMARK 3 S21: 0.1685 S22: -0.3305 S23: -0.1287 REMARK 3 S31: 0.1532 S32: 0.3229 S33: 0.1410 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1137 A 1142 REMARK 3 ORIGIN FOR THE GROUP (A): -2.1060 19.9590 21.9740 REMARK 3 T TENSOR REMARK 3 T11: 0.2219 T22: 0.2913 REMARK 3 T33: 0.3983 T12: -0.1047 REMARK 3 T13: 0.0772 T23: 0.0226 REMARK 3 L TENSOR REMARK 3 L11: 18.8043 L22: 12.4938 REMARK 3 L33: 19.7439 L12: -3.4962 REMARK 3 L13: 10.9924 L23: 10.5148 REMARK 3 S TENSOR REMARK 3 S11: 0.1913 S12: 0.8359 S13: 0.0842 REMARK 3 S21: -0.6709 S22: -0.9191 S23: 0.6144 REMARK 3 S31: -0.5768 S32: -0.3076 S33: 0.7279 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1143 A 1147 REMARK 3 ORIGIN FOR THE GROUP (A): 6.6790 22.0540 21.5250 REMARK 3 T TENSOR REMARK 3 T11: 0.8068 T22: 0.3655 REMARK 3 T33: 0.1133 T12: 0.0237 REMARK 3 T13: -0.0402 T23: -0.0545 REMARK 3 L TENSOR REMARK 3 L11: 24.6491 L22: 0.6808 REMARK 3 L33: 30.2626 L12: 0.6787 REMARK 3 L13: 4.2795 L23: 4.5322 REMARK 3 S TENSOR REMARK 3 S11: -0.3617 S12: 2.6213 S13: 0.1695 REMARK 3 S21: -0.4585 S22: -0.0668 S23: 0.0496 REMARK 3 S31: -2.8918 S32: -0.7708 S33: 0.4285 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1148 A 1168 REMARK 3 ORIGIN FOR THE GROUP (A): 13.3160 26.0710 36.8740 REMARK 3 T TENSOR REMARK 3 T11: 0.2074 T22: 0.2765 REMARK 3 T33: 0.1448 T12: -0.1001 REMARK 3 T13: -0.0513 T23: 0.0453 REMARK 3 L TENSOR REMARK 3 L11: 3.5676 L22: 4.2209 REMARK 3 L33: 2.2853 L12: -0.7798 REMARK 3 L13: -1.2194 L23: -0.8930 REMARK 3 S TENSOR REMARK 3 S11: 0.1993 S12: -0.8424 S13: -0.3459 REMARK 3 S21: 0.5959 S22: 0.0016 S23: -0.1145 REMARK 3 S31: -0.1188 S32: 0.4442 S33: -0.2009 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1169 A 1174 REMARK 3 ORIGIN FOR THE GROUP (A): 0.1320 14.4010 39.5640 REMARK 3 T TENSOR REMARK 3 T11: 0.5037 T22: 0.4473 REMARK 3 T33: 0.6905 T12: 0.0388 REMARK 3 T13: 0.0356 T23: 0.2368 REMARK 3 L TENSOR REMARK 3 L11: 11.4023 L22: 27.5690 REMARK 3 L33: 7.4255 L12: 17.7215 REMARK 3 L13: -0.8994 L23: -1.7010 REMARK 3 S TENSOR REMARK 3 S11: 0.4630 S12: 0.6248 S13: -0.2914 REMARK 3 S21: 0.4133 S22: 1.2533 S23: -0.3364 REMARK 3 S31: 0.7303 S32: -0.4196 S33: -1.7163 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1068 B 1074 REMARK 3 ORIGIN FOR THE GROUP (A): 13.2200 34.0830 31.2010 REMARK 3 T TENSOR REMARK 3 T11: 0.1135 T22: 0.0965 REMARK 3 T33: 0.1727 T12: -0.0398 REMARK 3 T13: 0.0591 T23: -0.0781 REMARK 3 L TENSOR REMARK 3 L11: 6.1189 L22: 4.4399 REMARK 3 L33: 6.5867 L12: -1.3876 REMARK 3 L13: 1.7928 L23: 0.2720 REMARK 3 S TENSOR REMARK 3 S11: 0.0529 S12: -0.2052 S13: 0.8271 REMARK 3 S21: 0.2617 S22: -0.0670 S23: -0.1207 REMARK 3 S31: -0.1524 S32: -0.3681 S33: 0.0142 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1075 B 1079 REMARK 3 ORIGIN FOR THE GROUP (A): 17.5950 31.6590 13.5580 REMARK 3 T TENSOR REMARK 3 T11: 0.2470 T22: 0.6584 REMARK 3 T33: 0.2060 T12: -0.0495 REMARK 3 T13: 0.1742 T23: -0.0538 REMARK 3 L TENSOR REMARK 3 L11: 5.3971 L22: 11.5881 REMARK 3 L33: 51.9364 L12: 7.8790 REMARK 3 L13: -15.1965 L23: -21.3065 REMARK 3 S TENSOR REMARK 3 S11: -0.1322 S12: 0.6518 S13: -0.0152 REMARK 3 S21: -0.0499 S22: 0.9754 S23: -0.0891 REMARK 3 S31: 0.0578 S32: -0.4894 S33: -0.8432 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1080 B 1084 REMARK 3 ORIGIN FOR THE GROUP (A): 25.2400 36.8860 0.7180 REMARK 3 T TENSOR REMARK 3 T11: 0.2612 T22: 0.3754 REMARK 3 T33: 0.2274 T12: 0.0269 REMARK 3 T13: 0.1245 T23: -0.1675 REMARK 3 L TENSOR REMARK 3 L11: 14.0965 L22: 13.4070 REMARK 3 L33: 4.0074 L12: 10.4813 REMARK 3 L13: -7.4617 L23: -6.0348 REMARK 3 S TENSOR REMARK 3 S11: 0.1131 S12: -0.5512 S13: 0.8083 REMARK 3 S21: 0.7563 S22: 0.1318 S23: 0.3947 REMARK 3 S31: -0.0303 S32: 0.1965 S33: -0.2449 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1085 B 1110 REMARK 3 ORIGIN FOR THE GROUP (A): 37.7530 34.3150 -10.1000 REMARK 3 T TENSOR REMARK 3 T11: 0.1015 T22: 0.0491 REMARK 3 T33: 0.0938 T12: -0.0005 REMARK 3 T13: 0.0119 T23: 0.0139 REMARK 3 L TENSOR REMARK 3 L11: 8.1927 L22: 8.2876 REMARK 3 L33: 2.1038 L12: -1.9518 REMARK 3 L13: -2.4107 L23: 1.2720 REMARK 3 S TENSOR REMARK 3 S11: 0.1755 S12: -0.2849 S13: 0.2147 REMARK 3 S21: 0.3740 S22: 0.0808 S23: -0.1916 REMARK 3 S31: 0.0287 S32: 0.1976 S33: -0.2562 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1111 B 1122 REMARK 3 ORIGIN FOR THE GROUP (A): 38.7960 25.1910 -8.5410 REMARK 3 T TENSOR REMARK 3 T11: 0.1607 T22: 0.0505 REMARK 3 T33: 0.2064 T12: 0.0168 REMARK 3 T13: -0.0967 T23: -0.0385 REMARK 3 L TENSOR REMARK 3 L11: 6.4501 L22: 4.4161 REMARK 3 L33: 2.5823 L12: 0.0829 REMARK 3 L13: -2.0111 L23: -2.5376 REMARK 3 S TENSOR REMARK 3 S11: 0.2539 S12: -0.1984 S13: -0.0462 REMARK 3 S21: 0.4687 S22: -0.1031 S23: -0.2707 REMARK 3 S31: -0.1973 S32: 0.2093 S33: -0.1509 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1123 B 1138 REMARK 3 ORIGIN FOR THE GROUP (A): 25.7870 24.1280 -7.3160 REMARK 3 T TENSOR REMARK 3 T11: 0.0962 T22: 0.0433 REMARK 3 T33: 0.0688 T12: -0.0172 REMARK 3 T13: 0.0023 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 14.1634 L22: 4.8251 REMARK 3 L33: 1.7021 L12: -2.1316 REMARK 3 L13: 1.0072 L23: 0.4485 REMARK 3 S TENSOR REMARK 3 S11: 0.2224 S12: -0.1629 S13: -0.4792 REMARK 3 S21: 0.3273 S22: -0.1792 S23: 0.3324 REMARK 3 S31: 0.1189 S32: -0.1312 S33: -0.0432 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1139 B 1146 REMARK 3 ORIGIN FOR THE GROUP (A): 39.4340 18.3860 -0.0930 REMARK 3 T TENSOR REMARK 3 T11: 0.2023 T22: 0.1061 REMARK 3 T33: 0.0874 T12: 0.0356 REMARK 3 T13: -0.0726 T23: 0.0632 REMARK 3 L TENSOR REMARK 3 L11: 10.3908 L22: 12.9853 REMARK 3 L33: 4.5628 L12: -11.5391 REMARK 3 L13: -1.4333 L23: 0.7277 REMARK 3 S TENSOR REMARK 3 S11: -0.3328 S12: -0.1864 S13: -0.1033 REMARK 3 S21: 0.3796 S22: 0.2121 S23: 0.0955 REMARK 3 S31: -0.0146 S32: 0.0065 S33: 0.1207 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1147 B 1152 REMARK 3 ORIGIN FOR THE GROUP (A): 26.6830 30.3920 -5.1990 REMARK 3 T TENSOR REMARK 3 T11: 0.1091 T22: 0.0633 REMARK 3 T33: 0.0950 T12: -0.0060 REMARK 3 T13: 0.0480 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 4.2696 L22: 11.9730 REMARK 3 L33: 3.3295 L12: -3.1668 REMARK 3 L13: 2.1917 L23: -2.4978 REMARK 3 S TENSOR REMARK 3 S11: 0.0766 S12: -0.2251 S13: 0.2560 REMARK 3 S21: 0.4970 S22: 0.1201 S23: 0.1484 REMARK 3 S31: -0.1392 S32: 0.0566 S33: -0.1967 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1153 B 1168 REMARK 3 ORIGIN FOR THE GROUP (A): 28.1600 27.4930 -16.8610 REMARK 3 T TENSOR REMARK 3 T11: 0.1216 T22: 0.0931 REMARK 3 T33: 0.0690 T12: 0.0507 REMARK 3 T13: -0.0005 T23: 0.0250 REMARK 3 L TENSOR REMARK 3 L11: 15.9250 L22: 6.7042 REMARK 3 L33: 1.5897 L12: -8.1420 REMARK 3 L13: -2.5773 L23: 2.4820 REMARK 3 S TENSOR REMARK 3 S11: 0.4150 S12: 0.8563 S13: 0.1716 REMARK 3 S21: -0.2251 S22: -0.2488 S23: -0.0621 REMARK 3 S31: -0.2330 S32: -0.1591 S33: -0.1663 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1169 B 1174 REMARK 3 ORIGIN FOR THE GROUP (A): 39.7850 16.8110 -18.8110 REMARK 3 T TENSOR REMARK 3 T11: 0.2529 T22: 0.2086 REMARK 3 T33: 0.2317 T12: -0.0105 REMARK 3 T13: -0.0362 T23: -0.0914 REMARK 3 L TENSOR REMARK 3 L11: 5.2021 L22: 24.4656 REMARK 3 L33: 10.7707 L12: 0.3927 REMARK 3 L13: 4.5431 L23: 13.2091 REMARK 3 S TENSOR REMARK 3 S11: 0.1581 S12: 0.1062 S13: 0.0301 REMARK 3 S21: -0.1143 S22: 0.6043 S23: -1.3970 REMARK 3 S31: 0.1616 S32: 0.3749 S33: -0.7624 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 3ULB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000068897. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NUMERICAL LINK TYPE SI(111) REMARK 200 DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22483 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 37.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.61100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2COD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL, 32% MPD, PH 8.7, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.38750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.11550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.85050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.11550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.38750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.85050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 1056 REMARK 465 ASN A 1057 REMARK 465 PHE A 1058 REMARK 465 GLN A 1059 REMARK 465 ASP A 1060 REMARK 465 LEU A 1061 REMARK 465 PHE A 1062 REMARK 465 THR A 1063 REMARK 465 GLY A 1064 REMARK 465 ALA A 1065 REMARK 465 GLY A 1101 REMARK 465 ARG A 1102 REMARK 465 ILE A 1103 REMARK 465 HIS A 1104 REMARK 465 TRP A 1105 REMARK 465 HIS A 1106 REMARK 465 ASP A 1107 REMARK 465 HIS A 1175 REMARK 465 LYS A 1176 REMARK 465 ASP B 1056 REMARK 465 ASN B 1057 REMARK 465 PHE B 1058 REMARK 465 GLN B 1059 REMARK 465 ASP B 1060 REMARK 465 LEU B 1061 REMARK 465 PHE B 1062 REMARK 465 THR B 1063 REMARK 465 GLY B 1064 REMARK 465 ALA B 1065 REMARK 465 TYR B 1066 REMARK 465 HIS B 1067 REMARK 465 PRO B 1099 REMARK 465 GLU B 1100 REMARK 465 GLY B 1101 REMARK 465 ARG B 1102 REMARK 465 ILE B 1103 REMARK 465 HIS B 1104 REMARK 465 TRP B 1105 REMARK 465 HIS B 1106 REMARK 465 ASP B 1107 REMARK 465 ASN B 1108 REMARK 465 HIS B 1175 REMARK 465 LYS B 1176 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A1100 CD OE1 OE2 REMARK 470 LYS A1110 CE NZ REMARK 470 LYS A1123 CE NZ REMARK 470 LYS A1126 CG CD CE NZ REMARK 470 ARG A1127 CD NE CZ NH1 NH2 REMARK 470 LYS A1145 CD CE NZ REMARK 470 GLN A1155 CG CD OE1 NE2 REMARK 470 LYS B1068 CE NZ REMARK 470 LYS B1110 CG CD CE NZ REMARK 470 LYS B1123 CD CE NZ REMARK 470 LYS B1126 CE NZ REMARK 470 ARG B1127 CG CD NE CZ NH1 NH2 REMARK 470 ARG B1138 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C PRO B 1098 O HOH B 109 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 120 O HOH B 94 2565 1.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A1067 CG HIS A1067 CD2 0.054 REMARK 500 TRP A1072 CE2 TRP A1072 CD2 0.074 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A1074 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS B1110 140.43 76.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 1099 GLU A 1100 135.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ULC RELATED DB: PDB REMARK 900 THE SAME PROTEIN CRYSTALLIZED IN A DIFFERENT CRYSTAL FORM. DBREF 3ULB A 1056 1176 UNP Q08236 AVO1_YEAST 1056 1176 DBREF 3ULB B 1056 1176 UNP Q08236 AVO1_YEAST 1056 1176 SEQRES 1 A 121 ASP ASN PHE GLN ASP LEU PHE THR GLY ALA TYR HIS LYS SEQRES 2 A 121 TYR LYS VAL TRP ARG ARG GLN GLN MET SER PHE ILE ASN SEQRES 3 A 121 LYS HIS GLU ARG THR LEU ALA ILE ASP GLY ASP TYR ILE SEQRES 4 A 121 TYR ILE VAL PRO PRO GLU GLY ARG ILE HIS TRP HIS ASP SEQRES 5 A 121 ASN VAL LYS THR LYS SER LEU HIS ILE SER GLN VAL VAL SEQRES 6 A 121 LEU VAL LYS LYS SER LYS ARG VAL PRO GLU HIS PHE LYS SEQRES 7 A 121 ILE PHE VAL ARG ARG GLU GLY GLN ASP ASP ILE LYS ARG SEQRES 8 A 121 TYR TYR PHE GLU ALA VAL SER GLY GLN GLU CYS THR GLU SEQRES 9 A 121 ILE VAL THR ARG LEU GLN ASN LEU LEU SER ALA TYR ARG SEQRES 10 A 121 MET ASN HIS LYS SEQRES 1 B 121 ASP ASN PHE GLN ASP LEU PHE THR GLY ALA TYR HIS LYS SEQRES 2 B 121 TYR LYS VAL TRP ARG ARG GLN GLN MET SER PHE ILE ASN SEQRES 3 B 121 LYS HIS GLU ARG THR LEU ALA ILE ASP GLY ASP TYR ILE SEQRES 4 B 121 TYR ILE VAL PRO PRO GLU GLY ARG ILE HIS TRP HIS ASP SEQRES 5 B 121 ASN VAL LYS THR LYS SER LEU HIS ILE SER GLN VAL VAL SEQRES 6 B 121 LEU VAL LYS LYS SER LYS ARG VAL PRO GLU HIS PHE LYS SEQRES 7 B 121 ILE PHE VAL ARG ARG GLU GLY GLN ASP ASP ILE LYS ARG SEQRES 8 B 121 TYR TYR PHE GLU ALA VAL SER GLY GLN GLU CYS THR GLU SEQRES 9 B 121 ILE VAL THR ARG LEU GLN ASN LEU LEU SER ALA TYR ARG SEQRES 10 B 121 MET ASN HIS LYS FORMUL 3 HOH *116(H2 O) HELIX 1 1 SER A 1153 ASN A 1174 1 22 HELIX 2 2 SER B 1153 ASN B 1174 1 22 SHEET 1 A 6 LYS A1112 HIS A1115 0 SHEET 2 A 6 TYR A1093 VAL A1097 -1 N ILE A1094 O LEU A1114 SHEET 3 A 6 TYR A1069 ASP A1090 -1 N THR A1086 O VAL A1097 SHEET 4 A 6 TYR B1069 ASP B1090 -1 O PHE B1079 N MET A1077 SHEET 5 A 6 TYR B1093 VAL B1097 -1 O TYR B1095 N ALA B1088 SHEET 6 A 6 LYS B1112 HIS B1115 -1 O LEU B1114 N ILE B1094 SHEET 1 B 8 VAL A1119 LYS A1124 0 SHEET 2 B 8 HIS A1131 VAL A1136 -1 O PHE A1135 N LEU A1121 SHEET 3 B 8 LYS A1145 ALA A1151 -1 O PHE A1149 N PHE A1132 SHEET 4 B 8 TYR B1069 ASP B1090 -1 O ARG B1074 N TYR A1148 SHEET 5 B 8 TYR A1069 ASP A1090 -1 N MET A1077 O PHE B1079 SHEET 6 B 8 LYS B1145 ALA B1151 -1 O TYR B1148 N ARG A1074 SHEET 7 B 8 HIS B1131 VAL B1136 -1 N PHE B1132 O PHE B1149 SHEET 8 B 8 VAL B1119 LYS B1124 -1 N LEU B1121 O PHE B1135 CRYST1 40.775 75.701 92.231 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024525 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013210 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010842 0.00000