HEADER TRANSFERASE 17-NOV-11 3UPD TITLE 2.9 ANGSTROM CRYSTAL STRUCTURE OF ORNITHINE CARBAMOYLTRANSFERASE TITLE 2 (ARGF) FROM VIBRIO VULNIFICUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ORNITHINE CARBAMOYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: OTCASE; COMPND 5 EC: 2.1.3.3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO VULNIFICUS; SOURCE 3 ORGANISM_TAXID: 216895; SOURCE 4 STRAIN: CMCP6; SOURCE 5 GENE: ARGF, VV1_1466; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, ALPHA AND BETA PROTEINS (A/B), ATC-LIKE, KEYWDS 3 ASPARTATE/ORNITHINE CARBAMOYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,A.HALAVATY,L.SHUVALOVA,J.WINSOR,I.DUBROVSKA,L.PAPAZISI, AUTHOR 2 W.F.ANDERSON,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 3 13-SEP-23 3UPD 1 SEQADV REVDAT 2 08-NOV-17 3UPD 1 REMARK REVDAT 1 07-DEC-11 3UPD 0 JRNL AUTH G.MINASOV,A.HALAVATY,L.SHUVALOVA,J.WINSOR,I.DUBROVSKA, JRNL AUTH 2 L.PAPAZISI,W.F.ANDERSON, JRNL AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 4 (CSGID) JRNL TITL 2.9 ANGSTROM CRYSTAL STRUCTURE OF ORNITHINE JRNL TITL 2 CARBAMOYLTRANSFERASE (ARGF) FROM VIBRIO VULNIFICUS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.11 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 12861 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 669 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.91 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 917 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2640 REMARK 3 BIN FREE R VALUE SET COUNT : 54 REMARK 3 BIN FREE R VALUE : 0.3150 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2698 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 47 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 82.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.266 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.191 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 23.258 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2753 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1834 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3715 ; 1.488 ; 1.938 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4479 ; 0.885 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 344 ; 1.898 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 132 ;26.981 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 475 ;10.731 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;15.637 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 404 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3101 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 554 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1709 ; 0.882 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 711 ; 0.153 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2728 ; 1.731 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1044 ; 2.747 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 987 ; 4.376 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -22 A -17 REMARK 3 ORIGIN FOR THE GROUP (A): 24.5251 -0.3239 32.9364 REMARK 3 T TENSOR REMARK 3 T11: 1.4272 T22: 0.9319 REMARK 3 T33: 1.3885 T12: 0.2947 REMARK 3 T13: -0.2260 T23: -0.3202 REMARK 3 L TENSOR REMARK 3 L11: 4.8888 L22: 32.4948 REMARK 3 L33: 12.7342 L12: 12.5790 REMARK 3 L13: 1.9575 L23: 5.9627 REMARK 3 S TENSOR REMARK 3 S11: 0.3766 S12: -0.2065 S13: 0.8269 REMARK 3 S21: 1.2944 S22: -0.4456 S23: 1.8638 REMARK 3 S31: 0.6722 S32: 0.5938 S33: 0.0689 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -5 A 183 REMARK 3 ORIGIN FOR THE GROUP (A): 21.0386 -22.0416 30.7513 REMARK 3 T TENSOR REMARK 3 T11: 0.0445 T22: 0.0987 REMARK 3 T33: 0.0082 T12: 0.0137 REMARK 3 T13: 0.0025 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.8798 L22: 1.8405 REMARK 3 L33: 1.0814 L12: 0.3111 REMARK 3 L13: -0.1020 L23: -0.3993 REMARK 3 S TENSOR REMARK 3 S11: 0.0102 S12: 0.1787 S13: 0.0082 REMARK 3 S21: -0.1898 S22: 0.0393 S23: 0.0626 REMARK 3 S31: 0.0240 S32: -0.1465 S33: -0.0495 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 184 A 249 REMARK 3 ORIGIN FOR THE GROUP (A): 32.1102 -18.0370 10.9466 REMARK 3 T TENSOR REMARK 3 T11: 0.4306 T22: 0.1970 REMARK 3 T33: 0.0255 T12: -0.0283 REMARK 3 T13: 0.0635 T23: -0.0440 REMARK 3 L TENSOR REMARK 3 L11: 4.7295 L22: 0.8872 REMARK 3 L33: 3.1969 L12: 1.0081 REMARK 3 L13: -0.7179 L23: 0.2283 REMARK 3 S TENSOR REMARK 3 S11: -0.1522 S12: 0.6074 S13: -0.2804 REMARK 3 S21: -0.5182 S22: 0.1581 S23: -0.1361 REMARK 3 S31: 0.2111 S32: 0.0211 S33: -0.0059 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 250 A 334 REMARK 3 ORIGIN FOR THE GROUP (A): 40.0707 -13.8258 23.2839 REMARK 3 T TENSOR REMARK 3 T11: 0.1266 T22: 0.0981 REMARK 3 T33: 0.0716 T12: -0.0214 REMARK 3 T13: 0.0874 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 1.0318 L22: 0.9763 REMARK 3 L33: 2.3751 L12: -0.3516 REMARK 3 L13: -0.3001 L23: -0.3903 REMARK 3 S TENSOR REMARK 3 S11: 0.0395 S12: 0.1492 S13: 0.0501 REMARK 3 S21: -0.2206 S22: -0.1185 S23: -0.2249 REMARK 3 S31: -0.0699 S32: 0.3145 S33: 0.0790 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3UPD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000069042. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97903 REMARK 200 MONOCHROMATOR : SI {1,1,1} REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13533 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.59700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1DUV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 7.2MG/ML, 0.25M SODIUM REMARK 280 CHLORIDE, 0.01M TRIS-HCL (PH 8.3); SCREEN: CALSSICS II (C2), REMARK 280 1.1M AMMONIUM TARTRATE (PH 7.0); CRYO: 4.0M SODIUM FORMATE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 76.98150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.98150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 76.98150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.98150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 76.98150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 76.98150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 76.98150 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 76.98150 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 76.98150 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 76.98150 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 76.98150 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 76.98150 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 76.98150 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 76.98150 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 76.98150 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 76.98150 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 76.98150 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 76.98150 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 76.98150 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 76.98150 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 76.98150 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 76.98150 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 76.98150 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 76.98150 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 76.98150 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 76.98150 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 76.98150 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 76.98150 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 76.98150 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 76.98150 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 76.98150 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 76.98150 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 76.98150 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 76.98150 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 76.98150 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 76.98150 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 76.98150 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 76.98150 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 -76.98150 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 76.98150 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 GLY A -14 REMARK 465 VAL A -13 REMARK 465 ASP A -12 REMARK 465 LEU A -11 REMARK 465 GLY A -10 REMARK 465 THR A -9 REMARK 465 GLU A -8 REMARK 465 ASN A -7 REMARK 465 LEU A -6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 57 77.06 -163.85 REMARK 500 PHE A 110 -126.33 -94.06 REMARK 500 LEU A 130 130.38 148.87 REMARK 500 HIS A 135 71.32 -153.37 REMARK 500 LEU A 276 150.28 70.24 REMARK 500 LEU A 299 -81.07 -102.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP91384 RELATED DB: TARGETDB DBREF 3UPD A 1 334 UNP Q8DCF5 OTC_VIBVU 1 334 SEQADV 3UPD MET A -23 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD HIS A -22 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD HIS A -21 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD HIS A -20 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD HIS A -19 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD HIS A -18 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD HIS A -17 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD SER A -16 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD SER A -15 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD GLY A -14 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD VAL A -13 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD ASP A -12 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD LEU A -11 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD GLY A -10 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD THR A -9 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD GLU A -8 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD ASN A -7 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD LEU A -6 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD TYR A -5 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD PHE A -4 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD GLN A -3 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD SER A -2 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD ASN A -1 UNP Q8DCF5 EXPRESSION TAG SEQADV 3UPD ALA A 0 UNP Q8DCF5 EXPRESSION TAG SEQRES 1 A 358 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 358 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET ALA SEQRES 3 A 358 PHE ASN LEU ARG ASN ARG ASN PHE LEU LYS LEU LEU ASP SEQRES 4 A 358 PHE SER THR LYS GLU ILE GLN PHE LEU ILE ASP LEU SER SEQRES 5 A 358 ALA ASP LEU LYS LYS ALA LYS TYR ALA GLY THR GLU GLN SEQRES 6 A 358 LYS LYS LEU LEU GLY LYS ASN ILE ALA LEU ILE PHE GLU SEQRES 7 A 358 LYS ALA SER THR ARG THR ARG CYS ALA PHE GLU VAL ALA SEQRES 8 A 358 ALA PHE ASP GLN GLY ALA GLN VAL THR TYR ILE GLY PRO SEQRES 9 A 358 SER GLY SER GLN ILE GLY ASP LYS GLU SER MET LYS ASP SEQRES 10 A 358 THR ALA ARG VAL LEU GLY ARG MET TYR ASP GLY ILE GLN SEQRES 11 A 358 TYR ARG GLY PHE GLY GLN ALA ILE VAL GLU GLU LEU GLY SEQRES 12 A 358 ALA PHE ALA GLY VAL PRO VAL TRP ASN GLY LEU THR ASP SEQRES 13 A 358 GLU PHE HIS PRO THR GLN ILE LEU ALA ASP PHE LEU THR SEQRES 14 A 358 MET LEU GLU HIS SER GLN GLY LYS ALA LEU ALA ASP ILE SEQRES 15 A 358 GLN PHE ALA TYR LEU GLY ASP ALA ARG ASN ASN VAL GLY SEQRES 16 A 358 ASN SER LEU MET VAL GLY ALA ALA LYS MET GLY MET ASP SEQRES 17 A 358 ILE ARG LEU VAL GLY PRO GLN ALA TYR TRP PRO ASP GLU SEQRES 18 A 358 GLU LEU VAL ALA ALA CYS GLN ALA ILE ALA LYS GLN THR SEQRES 19 A 358 GLY GLY LYS ILE THR LEU THR GLU ASN VAL ALA GLU GLY SEQRES 20 A 358 VAL GLN GLY CYS ASP PHE LEU TYR THR ASP VAL TRP VAL SEQRES 21 A 358 SER MET GLY GLU SER PRO GLU ALA TRP ASP GLU ARG VAL SEQRES 22 A 358 ALA LEU MET LYS PRO TYR GLN VAL ASN MET ASN VAL LEU SEQRES 23 A 358 LYS GLN THR GLY ASN PRO ASN VAL LYS PHE MET HIS CYS SEQRES 24 A 358 LEU PRO ALA PHE HIS ASN ASP GLU THR THR ILE GLY LYS SEQRES 25 A 358 GLN VAL ALA ASP LYS PHE GLY MET LYS GLY LEU GLU VAL SEQRES 26 A 358 THR GLU GLU VAL PHE GLU SER GLU HIS SER ILE VAL PHE SEQRES 27 A 358 ASP GLU ALA GLU ASN ARG MET HIS THR ILE LYS ALA VAL SEQRES 28 A 358 MET VAL ALA THR LEU GLY SER FORMUL 2 HOH *47(H2 O) HELIX 1 1 GLN A -3 ARG A 6 1 10 HELIX 2 2 LYS A 12 PHE A 16 5 5 HELIX 3 3 SER A 17 GLY A 38 1 22 HELIX 4 4 SER A 57 GLN A 71 1 15 HELIX 5 5 SER A 90 TYR A 102 1 13 HELIX 6 6 GLY A 111 ALA A 122 1 12 HELIX 7 7 HIS A 135 HIS A 149 1 15 HELIX 8 8 ALA A 154 ASP A 157 5 4 HELIX 9 9 ASN A 168 MET A 181 1 14 HELIX 10 10 PRO A 190 TRP A 194 5 5 HELIX 11 11 ASP A 196 GLY A 211 1 16 HELIX 12 12 ASN A 219 GLN A 225 1 7 HELIX 13 13 SER A 241 LYS A 253 1 13 HELIX 14 14 PRO A 254 GLN A 256 5 3 HELIX 15 15 ASN A 258 GLN A 264 1 7 HELIX 16 16 THR A 284 GLY A 295 1 12 HELIX 17 17 THR A 302 GLU A 307 1 6 HELIX 18 18 ILE A 312 GLY A 333 1 22 SHEET 1 A 4 GLN A 74 ILE A 78 0 SHEET 2 A 4 ASN A 48 PHE A 53 1 N LEU A 51 O THR A 76 SHEET 3 A 4 GLY A 104 ARG A 108 1 O GLN A 106 N ILE A 52 SHEET 4 A 4 VAL A 126 LEU A 130 1 O GLY A 129 N TYR A 107 SHEET 1 B 5 LYS A 213 THR A 217 0 SHEET 2 B 5 ASP A 184 VAL A 188 1 N ILE A 185 O LYS A 213 SHEET 3 B 5 GLN A 159 LEU A 163 1 N TYR A 162 O VAL A 188 SHEET 4 B 5 PHE A 229 THR A 232 1 O TYR A 231 N LEU A 163 SHEET 5 B 5 LYS A 271 HIS A 274 1 O MET A 273 N LEU A 230 CISPEP 1 GLU A 240 SER A 241 0 0.83 CISPEP 2 LEU A 276 PRO A 277 0 0.17 CRYST1 153.963 153.963 153.963 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006495 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006495 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006495 0.00000