HEADER IMMUNE SYSTEM 18-NOV-11 3UPR TITLE HLA-B*57:01 COMPLEXED TO PEP-V AND ABACAVIR COMPND MOL_ID: 1; COMPND 2 MOLECULE: HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-57 ALPHA CHAIN; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: BW-57, MHC CLASS I ANTIGEN B*57; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PEP-V; COMPND 8 CHAIN: P, Q; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 12 CHAIN: B, D; COMPND 13 SYNONYM: BETA-2-MICROGLOBULIN FORM PI 5.3; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HLA-B, HLAB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 MOL_ID: 3; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 GENE: B2M, CDABP0092, HDCMA22P; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS HLA-B*57:01, MHC, ANTIGEN PRESENTING CELL, T-CELL RECEPTOR, HUMAN KEYWDS 2 LEUKOCYTE ANTIGEN, DRUG HYPERSENSITIVITY, ABACAVIR HYPERSENSITIVITY, KEYWDS 3 REPERTOIRE-ALTERING SMALL MOLECULE, IMMUNE RESPONSE, IMMUNOGLOBULIN- KEYWDS 4 LIKE BETA-SANDWICH, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR Y.A.POMPEU,D.A.OSTROV REVDAT 3 13-SEP-23 3UPR 1 REMARK SEQADV REVDAT 2 14-NOV-12 3UPR 1 JRNL REVDAT 1 13-JUN-12 3UPR 0 JRNL AUTH D.A.OSTROV,B.J.GRANT,Y.A.POMPEU,J.SIDNEY,M.HARNDAHL, JRNL AUTH 2 S.SOUTHWOOD,C.OSEROFF,S.LU,J.JAKONCIC,C.A.DE OLIVEIRA, JRNL AUTH 3 L.YANG,H.MEI,L.SHI,J.SHABANOWITZ,A.M.ENGLISH,A.WRISTON, JRNL AUTH 4 A.LUCAS,E.PHILLIPS,S.MALLAL,H.M.GREY,A.SETTE,D.F.HUNT, JRNL AUTH 5 S.BUUS,B.PETERS JRNL TITL DRUG HYPERSENSITIVITY CAUSED BY ALTERATION OF THE JRNL TITL 2 MHC-PRESENTED SELF-PEPTIDE REPERTOIRE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 9959 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 22645359 JRNL DOI 10.1073/PNAS.1207934109 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.2_869) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 64671 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.150 REMARK 3 FREE R VALUE TEST SET COUNT : 3069 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.8871 - 5.4141 0.92 3125 169 0.1823 0.1969 REMARK 3 2 5.4141 - 4.3025 0.94 3156 168 0.1254 0.1565 REMARK 3 3 4.3025 - 3.7601 0.94 3124 166 0.1287 0.1736 REMARK 3 4 3.7601 - 3.4170 0.94 3143 168 0.1438 0.2125 REMARK 3 5 3.4170 - 3.1724 0.94 3146 168 0.1648 0.2107 REMARK 3 6 3.1724 - 2.9856 0.95 3158 164 0.1849 0.2373 REMARK 3 7 2.9856 - 2.8362 0.95 3169 169 0.2018 0.2427 REMARK 3 8 2.8362 - 2.7129 0.95 3185 164 0.2115 0.3238 REMARK 3 9 2.7129 - 2.6085 0.95 3125 163 0.2258 0.2691 REMARK 3 10 2.6085 - 2.5186 0.95 3173 164 0.2245 0.2729 REMARK 3 11 2.5186 - 2.4399 0.95 3158 166 0.2391 0.2624 REMARK 3 12 2.4399 - 2.3702 0.95 3140 169 0.2389 0.2489 REMARK 3 13 2.3702 - 2.3078 0.95 3184 164 0.2445 0.3053 REMARK 3 14 2.3078 - 2.2515 0.95 3148 167 0.2398 0.3164 REMARK 3 15 2.2515 - 2.2004 0.95 3151 166 0.2571 0.2784 REMARK 3 16 2.2004 - 2.1535 0.95 3143 160 0.2567 0.2707 REMARK 3 17 2.1535 - 2.1105 0.91 3005 154 0.2625 0.3449 REMARK 3 18 2.1105 - 2.0707 0.87 2912 154 0.2708 0.3322 REMARK 3 19 2.0707 - 2.0337 0.80 2633 132 0.2773 0.2811 REMARK 3 20 2.0337 - 1.9992 0.73 2467 124 0.2914 0.3372 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 37.61 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.37520 REMARK 3 B22 (A**2) : 6.70640 REMARK 3 B33 (A**2) : -2.33120 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.75500 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 6516 REMARK 3 ANGLE : 0.795 8855 REMARK 3 CHIRALITY : 0.058 911 REMARK 3 PLANARITY : 0.004 1157 REMARK 3 DIHEDRAL : 13.909 2411 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3UPR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000069055. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : SI(111) WITH TOROIDAL FOCUSING REMARK 200 MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64925 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09000 REMARK 200 FOR THE DATA SET : 22.8400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.48000 REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2RFX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NACACODYLATE, 0.1MNAACETATE, REMARK 280 25%PEG 8,000, 15% GLYCEROL, PH 6.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 65.70600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE MAIN BIOLOGICAL UNIT IS COMPOSED BY A HETERODIMER REMARK 300 CONSISTING OF A SINGLE HEAVY CHAIN (HLA-B*57-01) AND A SINGLE LIGHT REMARK 300 CHAIN (BETA2-MICROGLOBULIN) REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: Q, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 MET C 0 REMARK 465 GLY C 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 276 C - N - CD ANGL. DEV. = -13.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 14 73.62 -161.53 REMARK 500 ASP A 29 -124.84 54.63 REMARK 500 ASP A 114 89.39 -165.94 REMARK 500 TYR A 123 -77.11 -116.85 REMARK 500 SER A 131 -16.47 -147.42 REMARK 500 ARG A 239 -3.50 81.03 REMARK 500 TYR P 5 96.10 -163.35 REMARK 500 TRP B 60 -2.81 75.57 REMARK 500 ARG B 97 3.63 -66.92 REMARK 500 TYR Q 5 99.13 -163.22 REMARK 500 ARG C 14 70.50 -158.51 REMARK 500 ASP C 29 -122.04 53.84 REMARK 500 ASP C 114 91.53 -160.47 REMARK 500 TYR C 123 -75.88 -110.31 REMARK 500 SER C 131 -37.18 -134.84 REMARK 500 SER C 195 -164.53 -167.15 REMARK 500 GLN C 224 57.93 -115.25 REMARK 500 ARG C 239 -5.96 72.55 REMARK 500 PRO D 32 -169.91 -70.98 REMARK 500 LYS D 48 71.70 -101.73 REMARK 500 TRP D 60 -1.95 74.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1KX A 277 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 278 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1KX C 277 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C 278 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN P OF PEP-V REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN Q OF PEP-V REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2RFX RELATED DB: PDB REMARK 900 RELATED ID: 2HJL RELATED DB: PDB REMARK 900 RELATED ID: 2BVP RELATED DB: PDB REMARK 900 RELATED ID: 2BVO RELATED DB: PDB DBREF 3UPR A 1 276 UNP P18465 1B57_HUMAN 25 300 DBREF 3UPR B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 3UPR C 1 276 UNP P18465 1B57_HUMAN 25 300 DBREF 3UPR D 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 3UPR P 1 9 PDB 3UPR 3UPR 1 9 DBREF 3UPR Q 1 9 PDB 3UPR 3UPR 1 9 SEQADV 3UPR MET A 0 UNP P18465 INITIATING METHIONINE SEQADV 3UPR MET C 0 UNP P18465 INITIATING METHIONINE SEQRES 1 A 277 MET GLY SER HIS SER MET ARG TYR PHE TYR THR ALA MET SEQRES 2 A 277 SER ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE ALA VAL SEQRES 3 A 277 GLY TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP SER SEQRES 4 A 277 ASP ALA ALA SER PRO ARG MET ALA PRO ARG ALA PRO TRP SEQRES 5 A 277 ILE GLU GLN GLU GLY PRO GLU TYR TRP ASP GLY GLU THR SEQRES 6 A 277 ARG ASN MET LYS ALA SER ALA GLN THR TYR ARG GLU ASN SEQRES 7 A 277 LEU ARG ILE ALA LEU ARG TYR TYR ASN GLN SER GLU ALA SEQRES 8 A 277 GLY SER HIS ILE ILE GLN VAL MET TYR GLY CYS ASP VAL SEQRES 9 A 277 GLY PRO ASP GLY ARG LEU LEU ARG GLY HIS ASP GLN SER SEQRES 10 A 277 ALA TYR ASP GLY LYS ASP TYR ILE ALA LEU ASN GLU ASP SEQRES 11 A 277 LEU SER SER TRP THR ALA ALA ASP THR ALA ALA GLN ILE SEQRES 12 A 277 THR GLN ARG LYS TRP GLU ALA ALA ARG VAL ALA GLU GLN SEQRES 13 A 277 LEU ARG ALA TYR LEU GLU GLY LEU CYS VAL GLU TRP LEU SEQRES 14 A 277 ARG ARG TYR LEU GLU ASN GLY LYS GLU THR LEU GLN ARG SEQRES 15 A 277 ALA ASP PRO PRO LYS THR HIS VAL THR HIS HIS PRO ILE SEQRES 16 A 277 SER ASP HIS GLU ALA THR LEU ARG CYS TRP ALA LEU GLY SEQRES 17 A 277 PHE TYR PRO ALA GLU ILE THR LEU THR TRP GLN ARG ASP SEQRES 18 A 277 GLY GLU ASP GLN THR GLN ASP THR GLU LEU VAL GLU THR SEQRES 19 A 277 ARG PRO ALA GLY ASP ARG THR PHE GLN LYS TRP ALA ALA SEQRES 20 A 277 VAL VAL VAL PRO SER GLY GLU GLU GLN ARG TYR THR CYS SEQRES 21 A 277 HIS VAL GLN HIS GLU GLY LEU PRO LYS PRO LEU THR LEU SEQRES 22 A 277 ARG TRP GLU PRO SEQRES 1 P 9 HIS SER ILE THR TYR LEU LEU PRO VAL SEQRES 1 B 99 ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG HIS SEQRES 2 B 99 PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS TYR SEQRES 3 B 99 VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP LEU SEQRES 4 B 99 LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SER SEQRES 5 B 99 ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU LEU SEQRES 6 B 99 TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU TYR SEQRES 7 B 99 ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO LYS SEQRES 8 B 99 ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 Q 9 HIS SER ILE THR TYR LEU LEU PRO VAL SEQRES 1 C 277 MET GLY SER HIS SER MET ARG TYR PHE TYR THR ALA MET SEQRES 2 C 277 SER ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE ALA VAL SEQRES 3 C 277 GLY TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP SER SEQRES 4 C 277 ASP ALA ALA SER PRO ARG MET ALA PRO ARG ALA PRO TRP SEQRES 5 C 277 ILE GLU GLN GLU GLY PRO GLU TYR TRP ASP GLY GLU THR SEQRES 6 C 277 ARG ASN MET LYS ALA SER ALA GLN THR TYR ARG GLU ASN SEQRES 7 C 277 LEU ARG ILE ALA LEU ARG TYR TYR ASN GLN SER GLU ALA SEQRES 8 C 277 GLY SER HIS ILE ILE GLN VAL MET TYR GLY CYS ASP VAL SEQRES 9 C 277 GLY PRO ASP GLY ARG LEU LEU ARG GLY HIS ASP GLN SER SEQRES 10 C 277 ALA TYR ASP GLY LYS ASP TYR ILE ALA LEU ASN GLU ASP SEQRES 11 C 277 LEU SER SER TRP THR ALA ALA ASP THR ALA ALA GLN ILE SEQRES 12 C 277 THR GLN ARG LYS TRP GLU ALA ALA ARG VAL ALA GLU GLN SEQRES 13 C 277 LEU ARG ALA TYR LEU GLU GLY LEU CYS VAL GLU TRP LEU SEQRES 14 C 277 ARG ARG TYR LEU GLU ASN GLY LYS GLU THR LEU GLN ARG SEQRES 15 C 277 ALA ASP PRO PRO LYS THR HIS VAL THR HIS HIS PRO ILE SEQRES 16 C 277 SER ASP HIS GLU ALA THR LEU ARG CYS TRP ALA LEU GLY SEQRES 17 C 277 PHE TYR PRO ALA GLU ILE THR LEU THR TRP GLN ARG ASP SEQRES 18 C 277 GLY GLU ASP GLN THR GLN ASP THR GLU LEU VAL GLU THR SEQRES 19 C 277 ARG PRO ALA GLY ASP ARG THR PHE GLN LYS TRP ALA ALA SEQRES 20 C 277 VAL VAL VAL PRO SER GLY GLU GLU GLN ARG TYR THR CYS SEQRES 21 C 277 HIS VAL GLN HIS GLU GLY LEU PRO LYS PRO LEU THR LEU SEQRES 22 C 277 ARG TRP GLU PRO SEQRES 1 D 99 ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG HIS SEQRES 2 D 99 PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS TYR SEQRES 3 D 99 VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP LEU SEQRES 4 D 99 LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SER SEQRES 5 D 99 ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU LEU SEQRES 6 D 99 TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU TYR SEQRES 7 D 99 ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO LYS SEQRES 8 D 99 ILE VAL LYS TRP ASP ARG ASP MET HET 1KX A 277 21 HET CL A 278 1 HET 1KX C 277 21 HET CL C 278 1 HETNAM 1KX {(1S,4R)-4-[2-AMINO-6-(CYCLOPROPYLAMINO)-9H-PURIN-9- HETNAM 2 1KX YL]CYCLOPENT-2-EN-1-YL}METHANOL HETNAM CL CHLORIDE ION HETSYN 1KX ABACAVIR FORMUL 7 1KX 2(C14 H18 N6 O) FORMUL 8 CL 2(CL 1-) FORMUL 11 HOH *432(H2 O) HELIX 1 1 ALA A 49 GLU A 53 5 5 HELIX 2 2 GLY A 56 TYR A 85 1 30 HELIX 3 3 ASP A 137 ALA A 150 1 14 HELIX 4 4 ARG A 151 GLY A 162 1 12 HELIX 5 5 GLY A 162 GLY A 175 1 14 HELIX 6 6 GLY A 175 GLN A 180 1 6 HELIX 7 7 GLU A 253 GLN A 255 5 3 HELIX 8 8 ALA C 49 GLU C 53 5 5 HELIX 9 9 GLY C 56 TYR C 85 1 30 HELIX 10 10 ASP C 137 ALA C 150 1 14 HELIX 11 11 ARG C 151 GLY C 162 1 12 HELIX 12 12 GLY C 162 GLY C 175 1 14 HELIX 13 13 GLY C 175 GLN C 180 1 6 HELIX 14 14 GLU C 253 GLN C 255 5 3 SHEET 1 A 8 ALA A 46 PRO A 47 0 SHEET 2 A 8 THR A 31 ASP A 37 -1 N ARG A 35 O ALA A 46 SHEET 3 A 8 ARG A 21 VAL A 28 -1 N VAL A 28 O THR A 31 SHEET 4 A 8 HIS A 3 MET A 12 -1 N ARG A 6 O TYR A 27 SHEET 5 A 8 ILE A 94 VAL A 103 -1 O VAL A 97 N TYR A 9 SHEET 6 A 8 LEU A 109 TYR A 118 -1 O LEU A 110 N ASP A 102 SHEET 7 A 8 LYS A 121 LEU A 126 -1 O LEU A 126 N ASP A 114 SHEET 8 A 8 TRP A 133 ALA A 135 -1 O THR A 134 N ALA A 125 SHEET 1 B 4 LYS A 186 HIS A 192 0 SHEET 2 B 4 GLU A 198 PHE A 208 -1 O LEU A 206 N LYS A 186 SHEET 3 B 4 PHE A 241 PRO A 250 -1 O ALA A 245 N CYS A 203 SHEET 4 B 4 GLU A 229 LEU A 230 -1 N GLU A 229 O ALA A 246 SHEET 1 C 4 LYS A 186 HIS A 192 0 SHEET 2 C 4 GLU A 198 PHE A 208 -1 O LEU A 206 N LYS A 186 SHEET 3 C 4 PHE A 241 PRO A 250 -1 O ALA A 245 N CYS A 203 SHEET 4 C 4 ARG A 234 PRO A 235 -1 N ARG A 234 O GLN A 242 SHEET 1 D 4 GLU A 222 ASP A 223 0 SHEET 2 D 4 THR A 214 ARG A 219 -1 N ARG A 219 O GLU A 222 SHEET 3 D 4 TYR A 257 GLN A 262 -1 O HIS A 260 N THR A 216 SHEET 4 D 4 LEU A 270 LEU A 272 -1 O LEU A 272 N CYS A 259 SHEET 1 E 4 LYS B 6 SER B 11 0 SHEET 2 E 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 E 4 PHE B 62 PHE B 70 -1 O THR B 68 N LEU B 23 SHEET 4 E 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 F 4 LYS B 6 SER B 11 0 SHEET 2 F 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 F 4 PHE B 62 PHE B 70 -1 O THR B 68 N LEU B 23 SHEET 4 F 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 G 4 GLU B 44 ARG B 45 0 SHEET 2 G 4 GLU B 36 LYS B 41 -1 N LYS B 41 O GLU B 44 SHEET 3 G 4 TYR B 78 ASN B 83 -1 O ARG B 81 N ASP B 38 SHEET 4 G 4 LYS B 91 LYS B 94 -1 O VAL B 93 N CYS B 80 SHEET 1 H 8 ALA C 46 PRO C 47 0 SHEET 2 H 8 THR C 31 ASP C 37 -1 N ARG C 35 O ALA C 46 SHEET 3 H 8 ARG C 21 VAL C 28 -1 N VAL C 28 O THR C 31 SHEET 4 H 8 HIS C 3 MET C 12 -1 N ARG C 6 O TYR C 27 SHEET 5 H 8 ILE C 94 VAL C 103 -1 O ILE C 95 N ALA C 11 SHEET 6 H 8 LEU C 109 TYR C 118 -1 O LEU C 110 N ASP C 102 SHEET 7 H 8 LYS C 121 LEU C 126 -1 O TYR C 123 N SER C 116 SHEET 8 H 8 TRP C 133 ALA C 135 -1 O THR C 134 N ALA C 125 SHEET 1 I 4 LYS C 186 PRO C 193 0 SHEET 2 I 4 GLU C 198 PHE C 208 -1 O THR C 200 N HIS C 192 SHEET 3 I 4 PHE C 241 PRO C 250 -1 O ALA C 245 N CYS C 203 SHEET 4 I 4 GLU C 229 LEU C 230 -1 N GLU C 229 O ALA C 246 SHEET 1 J 4 LYS C 186 PRO C 193 0 SHEET 2 J 4 GLU C 198 PHE C 208 -1 O THR C 200 N HIS C 192 SHEET 3 J 4 PHE C 241 PRO C 250 -1 O ALA C 245 N CYS C 203 SHEET 4 J 4 ARG C 234 PRO C 235 -1 N ARG C 234 O GLN C 242 SHEET 1 K 4 GLU C 222 ASP C 223 0 SHEET 2 K 4 THR C 214 ARG C 219 -1 N ARG C 219 O GLU C 222 SHEET 3 K 4 TYR C 257 GLN C 262 -1 O HIS C 260 N THR C 216 SHEET 4 K 4 LEU C 270 LEU C 272 -1 O LEU C 272 N CYS C 259 SHEET 1 L 4 LYS D 6 SER D 11 0 SHEET 2 L 4 ASN D 21 PHE D 30 -1 O ASN D 24 N TYR D 10 SHEET 3 L 4 PHE D 62 PHE D 70 -1 O TYR D 66 N CYS D 25 SHEET 4 L 4 GLU D 50 HIS D 51 -1 N GLU D 50 O TYR D 67 SHEET 1 M 4 LYS D 6 SER D 11 0 SHEET 2 M 4 ASN D 21 PHE D 30 -1 O ASN D 24 N TYR D 10 SHEET 3 M 4 PHE D 62 PHE D 70 -1 O TYR D 66 N CYS D 25 SHEET 4 M 4 SER D 55 PHE D 56 -1 N SER D 55 O TYR D 63 SHEET 1 N 4 GLU D 44 ARG D 45 0 SHEET 2 N 4 GLU D 36 LYS D 41 -1 N LYS D 41 O GLU D 44 SHEET 3 N 4 TYR D 78 ASN D 83 -1 O ALA D 79 N LEU D 40 SHEET 4 N 4 LYS D 91 LYS D 94 -1 O LYS D 91 N VAL D 82 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.05 SSBOND 2 CYS A 203 CYS A 259 1555 1555 2.03 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.03 SSBOND 4 CYS C 101 CYS C 164 1555 1555 2.05 SSBOND 5 CYS C 203 CYS C 259 1555 1555 2.03 SSBOND 6 CYS D 25 CYS D 80 1555 1555 2.03 CISPEP 1 TYR A 209 PRO A 210 0 1.25 CISPEP 2 HIS B 31 PRO B 32 0 0.61 CISPEP 3 TYR C 209 PRO C 210 0 1.73 CISPEP 4 HIS D 31 PRO D 32 0 0.68 SITE 1 AC1 14 TYR A 9 TYR A 74 VAL A 97 TYR A 99 SITE 2 AC1 14 ASP A 114 GLN A 115 SER A 116 TYR A 123 SITE 3 AC1 14 ILE A 124 TRP A 147 HOH A 304 HOH A 326 SITE 4 AC1 14 ILE P 3 VAL P 9 SITE 1 AC2 2 ARG A 145 LEU C 163 SITE 1 AC3 17 TYR C 9 TYR C 74 ILE C 95 VAL C 97 SITE 2 AC3 17 TYR C 99 ASP C 114 GLN C 115 SER C 116 SITE 3 AC3 17 TYR C 123 ILE C 124 TRP C 147 HOH C 307 SITE 4 AC3 17 ILE Q 3 LEU Q 7 VAL Q 9 HOH Q 178 SITE 5 AC3 17 HOH Q 402 SITE 1 AC4 3 TYR A 159 ARG C 145 HOH C 293 SITE 1 AC5 27 TYR A 7 TYR A 9 TYR A 59 GLU A 63 SITE 2 AC5 27 ASN A 66 MET A 67 THR A 73 ASN A 77 SITE 3 AC5 27 TYR A 84 TYR A 99 THR A 143 TRP A 147 SITE 4 AC5 27 VAL A 152 GLN A 155 LEU A 156 TYR A 159 SITE 5 AC5 27 TRP A 167 TYR A 171 1KX A 277 HOH A 287 SITE 6 AC5 27 HOH A 302 HOH A 304 ARG C 145 HOH C 280 SITE 7 AC5 27 HOH P 151 HOH P 212 HOH P 225 SITE 1 AC6 29 ARG A 145 TYR C 7 TYR C 9 TYR C 59 SITE 2 AC6 29 GLU C 63 ASN C 66 MET C 67 ALA C 69 SITE 3 AC6 29 SER C 70 THR C 73 ASN C 77 TYR C 84 SITE 4 AC6 29 TYR C 99 THR C 143 LYS C 146 TRP C 147 SITE 5 AC6 29 VAL C 152 LEU C 156 TYR C 159 TRP C 167 SITE 6 AC6 29 TYR C 171 1KX C 277 HOH C 344 HOH C 384 SITE 7 AC6 29 HOH Q 115 HOH Q 144 HOH Q 178 HOH Q 296 SITE 8 AC6 29 HOH Q 402 CRYST1 44.751 131.412 88.340 90.00 104.30 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022346 0.000000 0.005696 0.00000 SCALE2 0.000000 0.007610 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011682 0.00000