HEADER STRUCTURAL PROTEIN/DNA 25-NOV-11 3UT9 TITLE CRYSTAL STRUCTURE OF NUCLEOSOME CORE PARTICLE ASSEMBLED WITH A TITLE 2 PALINDROMIC WIDOM '601' DERIVATIVE (NCP-601L) COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE H3.2; COMPND 3 CHAIN: A, E; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HISTONE H4; COMPND 7 CHAIN: B, F; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: HISTONE H2A; COMPND 11 CHAIN: C, G; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: HISTONE H2B 1.1; COMPND 15 CHAIN: D, H; COMPND 16 SYNONYM: H2B1.1; COMPND 17 ENGINEERED: YES; COMPND 18 MOL_ID: 5; COMPND 19 MOLECULE: 145-MER DNA; COMPND 20 CHAIN: I; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 6; COMPND 23 MOLECULE: 145-MER DNA; COMPND 24 CHAIN: J; COMPND 25 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 3 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 4 ORGANISM_TAXID: 8355; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET3D; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 12 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 13 ORGANISM_TAXID: 8355; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET3A; SOURCE 19 MOL_ID: 3; SOURCE 20 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 21 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 22 ORGANISM_TAXID: 8355; SOURCE 23 GENE: HIST1H2AJ, LOC494591; SOURCE 24 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 26 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 27 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 28 EXPRESSION_SYSTEM_PLASMID: PET3A; SOURCE 29 MOL_ID: 4; SOURCE 30 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 31 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 32 ORGANISM_TAXID: 8355; SOURCE 33 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 34 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 35 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 36 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 37 EXPRESSION_SYSTEM_PLASMID: PET3A; SOURCE 38 MOL_ID: 5; SOURCE 39 SYNTHETIC: YES; SOURCE 40 OTHER_DETAILS: SYNTHETIC CONSTRUCT; SOURCE 41 MOL_ID: 6; SOURCE 42 SYNTHETIC: YES; SOURCE 43 OTHER_DETAILS: SYNTHETIC CONSTRUCT KEYWDS NUCLEOSOME CORE PARTICLE, NCP, 601-SEQUENCE DNA, STRUCTURAL PROTEIN- KEYWDS 2 DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR E.Y.D.CHUA,D.VASUDEVAN,G.E.DAVEY,B.WU,C.A.DAVEY REVDAT 3 20-MAR-24 3UT9 1 REMARK LINK REVDAT 2 26-JUN-13 3UT9 1 JRNL REVDAT 1 11-APR-12 3UT9 0 JRNL AUTH E.Y.D.CHUA,D.VASUDEVAN,G.E.DAVEY,B.WU,C.A.DAVEY JRNL TITL THE MECHANICS BEHIND DNA SEQUENCE-DEPENDENT PROPERTIES OF JRNL TITL 2 THE NUCLEOSOME JRNL REF NUCLEIC ACIDS RES. V. 40 6338 2012 JRNL REFN ISSN 0305-1048 JRNL PMID 22453276 JRNL DOI 10.1093/NAR/GKS261 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.55 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 104004 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.257 REMARK 3 R VALUE (WORKING SET) : 0.257 REMARK 3 FREE R VALUE : 0.289 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2083 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7351 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.3570 REMARK 3 BIN FREE R VALUE SET COUNT : 140 REMARK 3 BIN FREE R VALUE : 0.4030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6068 REMARK 3 NUCLEIC ACID ATOMS : 5939 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 87.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.37000 REMARK 3 B22 (A**2) : -4.73000 REMARK 3 B33 (A**2) : -0.64000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.272 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.222 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.244 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.836 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 12811 ; 0.010 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 18543 ; 1.362 ; 2.543 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 754 ; 6.071 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 274 ;33.411 ;21.131 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1173 ;18.952 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 89 ;19.361 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2108 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7558 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 4701 ; 0.204 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 7929 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 432 ; 0.158 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 36 ; 0.290 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.338 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3782 ; 0.795 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6085 ; 1.416 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 9494 ; 1.256 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 12458 ; 1.886 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3UT9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000069180. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.80 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 104105 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 92.819 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05400 REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.50700 REMARK 200 R SYM FOR SHELL (I) : 0.50700 REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: K-CACODYLATE, KCL, MNCL2, PH 6.0, REMARK 280 TEMPERATURE 291K, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 53.24700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.41100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.76650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 87.41100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 53.24700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.76650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 62460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 71690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -531.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 ARG A 2 REMARK 465 THR A 3 REMARK 465 LYS A 4 REMARK 465 GLN A 5 REMARK 465 THR A 6 REMARK 465 ALA A 7 REMARK 465 ARG A 8 REMARK 465 LYS A 9 REMARK 465 SER A 10 REMARK 465 THR A 11 REMARK 465 GLY A 12 REMARK 465 GLY A 13 REMARK 465 LYS A 14 REMARK 465 ALA A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 LYS A 18 REMARK 465 GLN A 19 REMARK 465 LEU A 20 REMARK 465 ALA A 21 REMARK 465 THR A 22 REMARK 465 LYS A 23 REMARK 465 ALA A 24 REMARK 465 ALA A 25 REMARK 465 ARG A 26 REMARK 465 LYS A 27 REMARK 465 SER A 28 REMARK 465 ALA A 29 REMARK 465 PRO A 30 REMARK 465 ALA A 31 REMARK 465 THR A 32 REMARK 465 GLY A 33 REMARK 465 GLY A 34 REMARK 465 VAL A 35 REMARK 465 LYS A 36 REMARK 465 LYS A 37 REMARK 465 SER B 1 REMARK 465 GLY B 2 REMARK 465 ARG B 3 REMARK 465 GLY B 4 REMARK 465 LYS B 5 REMARK 465 GLY B 6 REMARK 465 GLY B 7 REMARK 465 LYS B 8 REMARK 465 GLY B 9 REMARK 465 LEU B 10 REMARK 465 GLY B 11 REMARK 465 LYS B 12 REMARK 465 GLY B 13 REMARK 465 GLY B 14 REMARK 465 ALA B 15 REMARK 465 LYS B 16 REMARK 465 ARG B 17 REMARK 465 HIS B 18 REMARK 465 ARG B 19 REMARK 465 LYS B 20 REMARK 465 VAL B 21 REMARK 465 LEU B 22 REMARK 465 ARG B 23 REMARK 465 SER C 1 REMARK 465 GLY C 2 REMARK 465 ARG C 3 REMARK 465 GLY C 4 REMARK 465 LYS C 5 REMARK 465 GLN C 6 REMARK 465 GLY C 7 REMARK 465 GLY C 8 REMARK 465 LYS C 9 REMARK 465 THR C 10 REMARK 465 ARG C 11 REMARK 465 ALA C 12 REMARK 465 LYS C 13 REMARK 465 LYS C 119 REMARK 465 THR C 120 REMARK 465 GLU C 121 REMARK 465 SER C 122 REMARK 465 SER C 123 REMARK 465 LYS C 124 REMARK 465 SER C 125 REMARK 465 ALA C 126 REMARK 465 LYS C 127 REMARK 465 SER C 128 REMARK 465 LYS C 129 REMARK 465 PRO D -2 REMARK 465 GLU D -1 REMARK 465 PRO D 0 REMARK 465 ALA D 1 REMARK 465 LYS D 2 REMARK 465 SER D 3 REMARK 465 ALA D 4 REMARK 465 PRO D 5 REMARK 465 ALA D 6 REMARK 465 PRO D 7 REMARK 465 LYS D 8 REMARK 465 LYS D 9 REMARK 465 GLY D 10 REMARK 465 SER D 11 REMARK 465 LYS D 12 REMARK 465 LYS D 13 REMARK 465 ALA D 14 REMARK 465 VAL D 15 REMARK 465 THR D 16 REMARK 465 LYS D 17 REMARK 465 THR D 18 REMARK 465 GLN D 19 REMARK 465 LYS D 20 REMARK 465 LYS D 21 REMARK 465 ASP D 22 REMARK 465 GLY D 23 REMARK 465 LYS D 24 REMARK 465 LYS D 25 REMARK 465 LYS D 122 REMARK 465 ALA E 1 REMARK 465 ARG E 2 REMARK 465 THR E 3 REMARK 465 LYS E 4 REMARK 465 GLN E 5 REMARK 465 THR E 6 REMARK 465 ALA E 7 REMARK 465 ARG E 8 REMARK 465 LYS E 9 REMARK 465 SER E 10 REMARK 465 THR E 11 REMARK 465 GLY E 12 REMARK 465 GLY E 13 REMARK 465 LYS E 14 REMARK 465 ALA E 15 REMARK 465 PRO E 16 REMARK 465 ARG E 17 REMARK 465 LYS E 18 REMARK 465 GLN E 19 REMARK 465 LEU E 20 REMARK 465 ALA E 21 REMARK 465 THR E 22 REMARK 465 LYS E 23 REMARK 465 ALA E 24 REMARK 465 ALA E 25 REMARK 465 ARG E 26 REMARK 465 LYS E 27 REMARK 465 SER E 28 REMARK 465 ALA E 29 REMARK 465 PRO E 30 REMARK 465 ALA E 31 REMARK 465 THR E 32 REMARK 465 GLY E 33 REMARK 465 GLY E 34 REMARK 465 VAL E 35 REMARK 465 LYS E 36 REMARK 465 LYS E 37 REMARK 465 ALA E 135 REMARK 465 SER F 1 REMARK 465 GLY F 2 REMARK 465 ARG F 3 REMARK 465 GLY F 4 REMARK 465 LYS F 5 REMARK 465 GLY F 6 REMARK 465 GLY F 7 REMARK 465 LYS F 8 REMARK 465 GLY F 9 REMARK 465 LEU F 10 REMARK 465 GLY F 11 REMARK 465 LYS F 12 REMARK 465 GLY F 13 REMARK 465 GLY F 14 REMARK 465 ALA F 15 REMARK 465 SER G 1 REMARK 465 GLY G 2 REMARK 465 ARG G 3 REMARK 465 GLY G 4 REMARK 465 LYS G 5 REMARK 465 GLN G 6 REMARK 465 GLY G 7 REMARK 465 GLY G 8 REMARK 465 LYS G 9 REMARK 465 THR G 10 REMARK 465 ARG G 11 REMARK 465 ALA G 12 REMARK 465 LYS G 13 REMARK 465 ALA G 14 REMARK 465 LYS G 15 REMARK 465 LYS G 119 REMARK 465 THR G 120 REMARK 465 GLU G 121 REMARK 465 SER G 122 REMARK 465 SER G 123 REMARK 465 LYS G 124 REMARK 465 SER G 125 REMARK 465 ALA G 126 REMARK 465 LYS G 127 REMARK 465 SER G 128 REMARK 465 LYS G 129 REMARK 465 PRO H -2 REMARK 465 GLU H -1 REMARK 465 PRO H 0 REMARK 465 ALA H 1 REMARK 465 LYS H 2 REMARK 465 SER H 3 REMARK 465 ALA H 4 REMARK 465 PRO H 5 REMARK 465 ALA H 6 REMARK 465 PRO H 7 REMARK 465 LYS H 8 REMARK 465 LYS H 9 REMARK 465 GLY H 10 REMARK 465 SER H 11 REMARK 465 LYS H 12 REMARK 465 LYS H 13 REMARK 465 ALA H 14 REMARK 465 VAL H 15 REMARK 465 THR H 16 REMARK 465 LYS H 17 REMARK 465 THR H 18 REMARK 465 GLN H 19 REMARK 465 LYS H 20 REMARK 465 LYS H 21 REMARK 465 ASP H 22 REMARK 465 GLY H 23 REMARK 465 LYS H 24 REMARK 465 LYS H 25 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU G 55 OG1 THR G 59 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL E 101 CA VAL E 101 CB -0.127 REMARK 500 VAL E 101 CB VAL E 101 CG2 0.222 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG C 88 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG C 88 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 DT I -71 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG I -58 C3' - O3' - P ANGL. DEV. = 9.1 DEGREES REMARK 500 DG I -52 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DC I -51 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC I -50 O4' - C1' - N1 ANGL. DEV. = 3.0 DEGREES REMARK 500 DG I -49 C3' - C2' - C1' ANGL. DEV. = -5.6 DEGREES REMARK 500 DT I -47 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DT I -43 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DG I -41 C3' - O3' - P ANGL. DEV. = 7.4 DEGREES REMARK 500 DG I -40 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 DC I -38 C3' - O3' - P ANGL. DEV. = 7.7 DEGREES REMARK 500 DT I -36 O4' - C1' - N1 ANGL. DEV. = 3.1 DEGREES REMARK 500 DA I -33 C3' - O3' - P ANGL. DEV. = 8.0 DEGREES REMARK 500 DC I -32 O4' - C1' - N1 ANGL. DEV. = 4.7 DEGREES REMARK 500 DA I -31 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC I -29 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DC I -27 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC I -21 O4' - C1' - N1 ANGL. DEV. = 3.4 DEGREES REMARK 500 DC I -20 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DC I -18 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DC I -10 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DC I -8 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DC I -4 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DT I 1 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DC I 7 O4' - C1' - N1 ANGL. DEV. = 3.6 DEGREES REMARK 500 DG I 8 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DC I 11 O4' - C1' - N1 ANGL. DEV. = 4.0 DEGREES REMARK 500 DT I 14 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 DA I 16 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 DG I 20 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DG I 20 C3' - O3' - P ANGL. DEV. = 8.8 DEGREES REMARK 500 DG I 21 O4' - C1' - N9 ANGL. DEV. = 6.5 DEGREES REMARK 500 DT I 22 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DG I 23 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG I 29 C3' - C2' - C1' ANGL. DEV. = -8.0 DEGREES REMARK 500 DG I 29 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 DC I 30 O4' - C1' - N1 ANGL. DEV. = 4.3 DEGREES REMARK 500 DT I 31 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DG I 32 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC I 34 C3' - O3' - P ANGL. DEV. = 8.2 DEGREES REMARK 500 DT I 44 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 DC I 49 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC I 52 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT I 54 C3' - O3' - P ANGL. DEV. = 9.0 DEGREES REMARK 500 DC I 58 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC I 61 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG I 62 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG I 63 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 111 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 39 138.13 -179.34 REMARK 500 ASP A 81 77.90 56.96 REMARK 500 ALA A 114 33.69 -98.51 REMARK 500 LYS C 36 34.32 -75.64 REMARK 500 LYS C 74 32.08 74.34 REMARK 500 LEU C 97 40.52 -101.35 REMARK 500 ALA C 103 137.13 -35.91 REMARK 500 ARG D 27 100.85 89.46 REMARK 500 HIS D 46 86.44 -159.01 REMARK 500 SER D 88 -27.71 -39.98 REMARK 500 ARG F 95 38.78 -140.61 REMARK 500 THR F 96 136.09 -36.18 REMARK 500 ASN G 110 104.80 -160.89 REMARK 500 ARG H 27 102.14 -171.95 REMARK 500 LYS H 28 -148.21 65.12 REMARK 500 THR H 29 96.99 97.16 REMARK 500 HIS H 46 73.42 -150.59 REMARK 500 LEU H 98 -74.23 -69.22 REMARK 500 SER H 120 33.14 -95.05 REMARK 500 ALA H 121 -2.39 -149.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG H 27 LYS H 28 143.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN E1001 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP E 77 OD1 REMARK 620 2 HOH E 145 O 119.6 REMARK 620 3 HOH E 146 O 112.1 83.8 REMARK 620 4 HOH E 150 O 83.2 90.7 164.5 REMARK 620 5 HOH F 115 O 170.5 55.5 76.3 88.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K I1052 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT I -26 O2 REMARK 620 2 DA I -25 O4' 82.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN I1007 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG I 50 N7 REMARK 620 2 HOH I 134 O 73.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN J1004 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DG J -34 N7 REMARK 620 2 HOH J 106 O 104.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K J1051 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT J -26 O2 REMARK 620 2 DA J -25 O4' 77.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C 1102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN E 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL G 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN I 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN I 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN I 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN I 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN I 1011 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN I 1013 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN I 1014 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN I 1016 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN I 1018 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN I 1021 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN I 1023 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN I 1028 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K I 1052 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN J 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN J 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN J 1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN J 1009 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN J 1010 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN J 1012 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN J 1015 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN J 1017 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN J 1020 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN J 1022 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN J 1024 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN J 1025 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN J 1026 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K J 1051 REMARK 999 REMARK 999 SEQUENCE REMARK 999 UNINTENTIONAL MUTATIONS OR VARIATIONS IN GENOMIC SOURCES. DBREF 3UT9 A 1 135 UNP P84233 H32_XENLA 2 136 DBREF 3UT9 B 1 102 UNP P62799 H4_XENLA 2 103 DBREF 3UT9 C 1 129 UNP Q6AZJ8 Q6AZJ8_XENLA 2 130 DBREF 3UT9 D -2 122 UNP P02281 H2B11_XENLA 2 126 DBREF 3UT9 E 1 135 UNP P84233 H32_XENLA 2 136 DBREF 3UT9 F 1 102 UNP P62799 H4_XENLA 2 103 DBREF 3UT9 G 1 129 UNP Q6AZJ8 Q6AZJ8_XENLA 2 130 DBREF 3UT9 H -2 122 UNP P02281 H2B11_XENLA 2 126 DBREF 3UT9 I -72 72 PDB 3UT9 3UT9 -72 72 DBREF 3UT9 J -72 72 PDB 3UT9 3UT9 -72 72 SEQADV 3UT9 ALA A 102 UNP P84233 GLY 103 SEE REMARK 999 SEQADV 3UT9 THR D 29 UNP P02281 SER 33 SEE REMARK 999 SEQADV 3UT9 ALA E 102 UNP P84233 GLY 103 SEE REMARK 999 SEQADV 3UT9 THR H 29 UNP P02281 SER 33 SEE REMARK 999 SEQRES 1 A 135 ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY GLY SEQRES 2 A 135 LYS ALA PRO ARG LYS GLN LEU ALA THR LYS ALA ALA ARG SEQRES 3 A 135 LYS SER ALA PRO ALA THR GLY GLY VAL LYS LYS PRO HIS SEQRES 4 A 135 ARG TYR ARG PRO GLY THR VAL ALA LEU ARG GLU ILE ARG SEQRES 5 A 135 ARG TYR GLN LYS SER THR GLU LEU LEU ILE ARG LYS LEU SEQRES 6 A 135 PRO PHE GLN ARG LEU VAL ARG GLU ILE ALA GLN ASP PHE SEQRES 7 A 135 LYS THR ASP LEU ARG PHE GLN SER SER ALA VAL MET ALA SEQRES 8 A 135 LEU GLN GLU ALA SER GLU ALA TYR LEU VAL ALA LEU PHE SEQRES 9 A 135 GLU ASP THR ASN LEU CYS ALA ILE HIS ALA LYS ARG VAL SEQRES 10 A 135 THR ILE MET PRO LYS ASP ILE GLN LEU ALA ARG ARG ILE SEQRES 11 A 135 ARG GLY GLU ARG ALA SEQRES 1 B 102 SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY LYS GLY SEQRES 2 B 102 GLY ALA LYS ARG HIS ARG LYS VAL LEU ARG ASP ASN ILE SEQRES 3 B 102 GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA ARG SEQRES 4 B 102 ARG GLY GLY VAL LYS ARG ILE SER GLY LEU ILE TYR GLU SEQRES 5 B 102 GLU THR ARG GLY VAL LEU LYS VAL PHE LEU GLU ASN VAL SEQRES 6 B 102 ILE ARG ASP ALA VAL THR TYR THR GLU HIS ALA LYS ARG SEQRES 7 B 102 LYS THR VAL THR ALA MET ASP VAL VAL TYR ALA LEU LYS SEQRES 8 B 102 ARG GLN GLY ARG THR LEU TYR GLY PHE GLY GLY SEQRES 1 C 129 SER GLY ARG GLY LYS GLN GLY GLY LYS THR ARG ALA LYS SEQRES 2 C 129 ALA LYS THR ARG SER SER ARG ALA GLY LEU GLN PHE PRO SEQRES 3 C 129 VAL GLY ARG VAL HIS ARG LEU LEU ARG LYS GLY ASN TYR SEQRES 4 C 129 ALA GLU ARG VAL GLY ALA GLY ALA PRO VAL TYR LEU ALA SEQRES 5 C 129 ALA VAL LEU GLU TYR LEU THR ALA GLU ILE LEU GLU LEU SEQRES 6 C 129 ALA GLY ASN ALA ALA ARG ASP ASN LYS LYS THR ARG ILE SEQRES 7 C 129 ILE PRO ARG HIS LEU GLN LEU ALA VAL ARG ASN ASP GLU SEQRES 8 C 129 GLU LEU ASN LYS LEU LEU GLY ARG VAL THR ILE ALA GLN SEQRES 9 C 129 GLY GLY VAL LEU PRO ASN ILE GLN SER VAL LEU LEU PRO SEQRES 10 C 129 LYS LYS THR GLU SER SER LYS SER ALA LYS SER LYS SEQRES 1 D 125 PRO GLU PRO ALA LYS SER ALA PRO ALA PRO LYS LYS GLY SEQRES 2 D 125 SER LYS LYS ALA VAL THR LYS THR GLN LYS LYS ASP GLY SEQRES 3 D 125 LYS LYS ARG ARG LYS THR ARG LYS GLU SER TYR ALA ILE SEQRES 4 D 125 TYR VAL TYR LYS VAL LEU LYS GLN VAL HIS PRO ASP THR SEQRES 5 D 125 GLY ILE SER SER LYS ALA MET SER ILE MET ASN SER PHE SEQRES 6 D 125 VAL ASN ASP VAL PHE GLU ARG ILE ALA GLY GLU ALA SER SEQRES 7 D 125 ARG LEU ALA HIS TYR ASN LYS ARG SER THR ILE THR SER SEQRES 8 D 125 ARG GLU ILE GLN THR ALA VAL ARG LEU LEU LEU PRO GLY SEQRES 9 D 125 GLU LEU ALA LYS HIS ALA VAL SER GLU GLY THR LYS ALA SEQRES 10 D 125 VAL THR LYS TYR THR SER ALA LYS SEQRES 1 E 135 ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY GLY SEQRES 2 E 135 LYS ALA PRO ARG LYS GLN LEU ALA THR LYS ALA ALA ARG SEQRES 3 E 135 LYS SER ALA PRO ALA THR GLY GLY VAL LYS LYS PRO HIS SEQRES 4 E 135 ARG TYR ARG PRO GLY THR VAL ALA LEU ARG GLU ILE ARG SEQRES 5 E 135 ARG TYR GLN LYS SER THR GLU LEU LEU ILE ARG LYS LEU SEQRES 6 E 135 PRO PHE GLN ARG LEU VAL ARG GLU ILE ALA GLN ASP PHE SEQRES 7 E 135 LYS THR ASP LEU ARG PHE GLN SER SER ALA VAL MET ALA SEQRES 8 E 135 LEU GLN GLU ALA SER GLU ALA TYR LEU VAL ALA LEU PHE SEQRES 9 E 135 GLU ASP THR ASN LEU CYS ALA ILE HIS ALA LYS ARG VAL SEQRES 10 E 135 THR ILE MET PRO LYS ASP ILE GLN LEU ALA ARG ARG ILE SEQRES 11 E 135 ARG GLY GLU ARG ALA SEQRES 1 F 102 SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY LYS GLY SEQRES 2 F 102 GLY ALA LYS ARG HIS ARG LYS VAL LEU ARG ASP ASN ILE SEQRES 3 F 102 GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA ARG SEQRES 4 F 102 ARG GLY GLY VAL LYS ARG ILE SER GLY LEU ILE TYR GLU SEQRES 5 F 102 GLU THR ARG GLY VAL LEU LYS VAL PHE LEU GLU ASN VAL SEQRES 6 F 102 ILE ARG ASP ALA VAL THR TYR THR GLU HIS ALA LYS ARG SEQRES 7 F 102 LYS THR VAL THR ALA MET ASP VAL VAL TYR ALA LEU LYS SEQRES 8 F 102 ARG GLN GLY ARG THR LEU TYR GLY PHE GLY GLY SEQRES 1 G 129 SER GLY ARG GLY LYS GLN GLY GLY LYS THR ARG ALA LYS SEQRES 2 G 129 ALA LYS THR ARG SER SER ARG ALA GLY LEU GLN PHE PRO SEQRES 3 G 129 VAL GLY ARG VAL HIS ARG LEU LEU ARG LYS GLY ASN TYR SEQRES 4 G 129 ALA GLU ARG VAL GLY ALA GLY ALA PRO VAL TYR LEU ALA SEQRES 5 G 129 ALA VAL LEU GLU TYR LEU THR ALA GLU ILE LEU GLU LEU SEQRES 6 G 129 ALA GLY ASN ALA ALA ARG ASP ASN LYS LYS THR ARG ILE SEQRES 7 G 129 ILE PRO ARG HIS LEU GLN LEU ALA VAL ARG ASN ASP GLU SEQRES 8 G 129 GLU LEU ASN LYS LEU LEU GLY ARG VAL THR ILE ALA GLN SEQRES 9 G 129 GLY GLY VAL LEU PRO ASN ILE GLN SER VAL LEU LEU PRO SEQRES 10 G 129 LYS LYS THR GLU SER SER LYS SER ALA LYS SER LYS SEQRES 1 H 125 PRO GLU PRO ALA LYS SER ALA PRO ALA PRO LYS LYS GLY SEQRES 2 H 125 SER LYS LYS ALA VAL THR LYS THR GLN LYS LYS ASP GLY SEQRES 3 H 125 LYS LYS ARG ARG LYS THR ARG LYS GLU SER TYR ALA ILE SEQRES 4 H 125 TYR VAL TYR LYS VAL LEU LYS GLN VAL HIS PRO ASP THR SEQRES 5 H 125 GLY ILE SER SER LYS ALA MET SER ILE MET ASN SER PHE SEQRES 6 H 125 VAL ASN ASP VAL PHE GLU ARG ILE ALA GLY GLU ALA SER SEQRES 7 H 125 ARG LEU ALA HIS TYR ASN LYS ARG SER THR ILE THR SER SEQRES 8 H 125 ARG GLU ILE GLN THR ALA VAL ARG LEU LEU LEU PRO GLY SEQRES 9 H 125 GLU LEU ALA LYS HIS ALA VAL SER GLU GLY THR LYS ALA SEQRES 10 H 125 VAL THR LYS TYR THR SER ALA LYS SEQRES 1 I 145 DA DT DC DA DC DA DA DT DC DC DC DG DG SEQRES 2 I 145 DT DG DC DC DG DA DG DG DC DC DG DC DT SEQRES 3 I 145 DC DA DA DT DT DG DG DT DC DG DT DA DG SEQRES 4 I 145 DA DC DA DG DC DT DC DT DA DG DC DA DC SEQRES 5 I 145 DC DG DC DT DT DA DA DA DC DG DC DA DC SEQRES 6 I 145 DG DT DA DC DG DG DA DA DT DC DC DG DT SEQRES 7 I 145 DA DC DG DT DG DC DG DT DT DT DA DA DG SEQRES 8 I 145 DC DG DG DT DG DC DT DA DG DA DG DC DT SEQRES 9 I 145 DG DT DC DT DA DC DG DA DC DC DA DA DT SEQRES 10 I 145 DT DG DA DG DC DG DG DC DC DT DC DG DG SEQRES 11 I 145 DC DA DC DC DG DG DG DA DT DT DG DT DG SEQRES 12 I 145 DA DT SEQRES 1 J 145 DA DT DC DA DC DA DA DT DC DC DC DG DG SEQRES 2 J 145 DT DG DC DC DG DA DG DG DC DC DG DC DT SEQRES 3 J 145 DC DA DA DT DT DG DG DT DC DG DT DA DG SEQRES 4 J 145 DA DC DA DG DC DT DC DT DA DG DC DA DC SEQRES 5 J 145 DC DG DC DT DT DA DA DA DC DG DC DA DC SEQRES 6 J 145 DG DT DA DC DG DG DA DT DT DC DC DG DT SEQRES 7 J 145 DA DC DG DT DG DC DG DT DT DT DA DA DG SEQRES 8 J 145 DC DG DG DT DG DC DT DA DG DA DG DC DT SEQRES 9 J 145 DG DT DC DT DA DC DG DA DC DC DA DA DT SEQRES 10 J 145 DT DG DA DG DC DG DG DC DC DT DC DG DG SEQRES 11 J 145 DC DA DC DC DG DG DG DA DT DT DG DT DG SEQRES 12 J 145 DA DT HET CL C1102 1 HET MN E1001 1 HET CL G1101 1 HET MN I1003 1 HET MN I1005 1 HET MN I1006 1 HET MN I1007 1 HET MN I1011 1 HET MN I1013 1 HET MN I1014 1 HET MN I1016 1 HET MN I1018 1 HET MN I1019 1 HET MN I1021 1 HET MN I1023 1 HET MN I1027 1 HET MN I1028 1 HET K I1052 1 HET MN J1002 1 HET MN J1004 1 HET MN J1008 1 HET MN J1009 1 HET MN J1010 1 HET MN J1012 1 HET MN J1015 1 HET MN J1017 1 HET MN J1020 1 HET MN J1022 1 HET MN J1024 1 HET MN J1025 1 HET MN J1026 1 HET MN J1029 1 HET K J1051 1 HETNAM CL CHLORIDE ION HETNAM MN MANGANESE (II) ION HETNAM K POTASSIUM ION FORMUL 11 CL 2(CL 1-) FORMUL 12 MN 29(MN 2+) FORMUL 28 K 2(K 1+) FORMUL 44 HOH *140(H2 O) HELIX 1 1 GLY A 44 GLN A 55 1 12 HELIX 2 2 ARG A 63 ASP A 77 1 15 HELIX 3 3 GLN A 85 ALA A 114 1 30 HELIX 4 4 MET A 120 ARG A 131 1 12 HELIX 5 5 ASN B 25 ILE B 29 5 5 HELIX 6 6 THR B 30 GLY B 41 1 12 HELIX 7 7 LEU B 49 ALA B 76 1 28 HELIX 8 8 THR B 82 GLN B 93 1 12 HELIX 9 9 PRO C 26 LYS C 36 1 11 HELIX 10 10 GLY C 46 ASN C 73 1 28 HELIX 11 11 ILE C 79 ASP C 90 1 12 HELIX 12 12 ASP C 90 LEU C 97 1 8 HELIX 13 13 GLN C 112 LEU C 116 5 5 HELIX 14 14 TYR D 34 HIS D 46 1 13 HELIX 15 15 SER D 52 ASN D 81 1 30 HELIX 16 16 THR D 87 LEU D 99 1 13 HELIX 17 17 PRO D 100 ALA D 121 1 22 HELIX 18 18 GLY E 44 SER E 57 1 14 HELIX 19 19 ARG E 63 ASP E 77 1 15 HELIX 20 20 GLN E 85 ALA E 114 1 30 HELIX 21 21 MET E 120 ARG E 131 1 12 HELIX 22 22 ASP F 24 ILE F 29 5 6 HELIX 23 23 THR F 30 ARG F 40 1 11 HELIX 24 24 LEU F 49 ALA F 76 1 28 HELIX 25 25 THR F 82 GLN F 93 1 12 HELIX 26 26 ARG G 17 GLY G 22 1 6 HELIX 27 27 PRO G 26 GLY G 37 1 12 HELIX 28 28 GLY G 46 ASN G 73 1 28 HELIX 29 29 ILE G 79 ASP G 90 1 12 HELIX 30 30 ASP G 90 LEU G 97 1 8 HELIX 31 31 GLN G 112 LEU G 116 5 5 HELIX 32 32 TYR H 34 HIS H 46 1 13 HELIX 33 33 SER H 52 ASN H 81 1 30 HELIX 34 34 THR H 87 LEU H 99 1 13 HELIX 35 35 PRO H 100 SER H 120 1 21 SHEET 1 A 2 ARG A 83 PHE A 84 0 SHEET 2 A 2 THR B 80 VAL B 81 1 O VAL B 81 N ARG A 83 SHEET 1 B 2 THR A 118 ILE A 119 0 SHEET 2 B 2 ARG B 45 ILE B 46 1 O ARG B 45 N ILE A 119 SHEET 1 C 2 THR B 96 TYR B 98 0 SHEET 2 C 2 VAL G 100 ILE G 102 1 O THR G 101 N TYR B 98 SHEET 1 D 2 ARG C 42 VAL C 43 0 SHEET 2 D 2 THR D 85 ILE D 86 1 O ILE D 86 N ARG C 42 SHEET 1 E 2 ARG C 77 ILE C 78 0 SHEET 2 E 2 GLY D 50 ILE D 51 1 O GLY D 50 N ILE C 78 SHEET 1 F 2 THR C 101 ILE C 102 0 SHEET 2 F 2 LEU F 97 TYR F 98 1 O TYR F 98 N THR C 101 SHEET 1 G 2 ARG E 83 PHE E 84 0 SHEET 2 G 2 THR F 80 VAL F 81 1 O VAL F 81 N ARG E 83 SHEET 1 H 2 THR E 118 ILE E 119 0 SHEET 2 H 2 ARG F 45 ILE F 46 1 O ARG F 45 N ILE E 119 SHEET 1 I 2 ARG G 42 VAL G 43 0 SHEET 2 I 2 THR H 85 ILE H 86 1 O ILE H 86 N ARG G 42 SHEET 1 J 2 ARG G 77 ILE G 78 0 SHEET 2 J 2 GLY H 50 ILE H 51 1 O GLY H 50 N ILE G 78 LINK OD1 ASP E 77 MN MN E1001 1555 1555 2.22 LINK O HOH E 145 MN MN E1001 1555 1555 2.65 LINK O HOH E 146 MN MN E1001 1555 1555 1.79 LINK O HOH E 150 MN MN E1001 1555 1555 1.77 LINK MN MN E1001 O HOH F 115 1555 1555 2.11 LINK N7 DG I -61 MN MN I1003 1555 1555 2.32 LINK N7 DG I -53 MN MN I1016 1555 1555 2.61 LINK N7 DG I -34 MN MN I1011 1555 1555 2.75 LINK O2 DT I -26 K K I1052 1555 1555 2.95 LINK O4' DA I -25 K K I1052 1555 1555 3.49 LINK N7 DG I -3 MN MN I1005 1555 1555 2.43 LINK N7 DG I 27 MN MN I1018 1555 1555 2.66 LINK N7 DG I 38 MN MN I1006 1555 1555 2.61 LINK N7 DG I 50 MN MN I1007 1555 1555 2.48 LINK N7 DG I 63 MN MN I1023 1555 1555 2.45 LINK O HOH I 132 MN MN I1021 1555 1555 2.59 LINK O HOH I 134 MN MN I1007 1555 1555 2.28 LINK N7 DG J -61 MN MN J1017 1555 1555 2.35 LINK N7 DG J -53 MN MN J1022 1555 1555 2.69 LINK N7 DG J -34 MN MN J1004 1555 1555 2.19 LINK O2 DT J -26 K K J1051 1555 1555 3.03 LINK O4' DA J -25 K K J1051 1555 1555 3.30 LINK N7 DG J -3 MN MN J1002 1555 1555 2.68 LINK N7 DG J 20 MN MN J1015 1555 1555 2.73 LINK N7 DG J 27 MN MN J1009 1555 1555 2.66 LINK O6 DG J 29 MN MN J1024 1555 1555 2.65 LINK N7 DG J 38 MN MN J1012 1555 1555 2.67 LINK N7 DG J 62 MN MN J1010 1555 1555 2.35 LINK O HOH J 106 MN MN J1004 1555 1555 2.42 SITE 1 AC1 4 ALA C 45 GLY C 46 THR D 87 SER D 88 SITE 1 AC2 6 VAL D 45 ASP E 77 HOH E 145 HOH E 146 SITE 2 AC2 6 HOH E 150 HOH F 115 SITE 1 AC3 5 GLY G 44 GLY G 46 ALA G 47 THR H 87 SITE 2 AC3 5 SER H 88 SITE 1 AC4 1 DG I -61 SITE 1 AC5 2 DG I -3 DG I -2 SITE 1 AC6 1 DG I 38 SITE 1 AC7 3 DG I 50 DG I 51 HOH I 134 SITE 1 AC8 1 DG I -34 SITE 1 AC9 1 DG I 29 SITE 1 BC1 1 DG I -49 SITE 1 BC2 1 DG I -53 SITE 1 BC3 1 DG I 27 SITE 1 BC4 2 DG I 20 HOH I 132 SITE 1 BC5 2 DG I 62 DG I 63 SITE 1 BC6 1 DC I 3 SITE 1 BC7 2 DT I -26 DA I -25 SITE 1 BC8 1 DG J -3 SITE 1 BC9 2 DG J -34 HOH J 106 SITE 1 CC1 1 DG J 50 SITE 1 CC2 1 DG J 27 SITE 1 CC3 2 DG J 62 HOH J 129 SITE 1 CC4 1 DG J 38 SITE 1 CC5 2 DG J 20 DG J 21 SITE 1 CC6 2 DC J -62 DG J -61 SITE 1 CC7 1 DG J -49 SITE 1 CC8 1 DG J -53 SITE 1 CC9 1 DG J 29 SITE 1 DC1 1 DA J 36 SITE 1 DC2 1 DG J 63 SITE 1 DC3 2 DA J -25 DT J -26 CRYST1 106.494 109.533 174.822 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009390 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009130 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005720 0.00000