HEADER HORMONE RECEPTOR 28-NOV-11 3UUC TITLE CRYSTAL STRUCTURE OF HERA-LBD (WT) IN COMPLEX WITH BISPHENOL-C COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTROGEN RECEPTOR; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: LIGAND BINDING DOMAIN (RESIDUES 302-552); COMPND 5 SYNONYM: ER, ER-ALPHA, ESTRADIOL RECEPTOR, NUCLEAR RECEPTOR SUBFAMILY COMPND 6 3 GROUP A MEMBER 1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ESR1, ESR, NR3A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET32A KEYWDS LIGAND-BINDING DOMAIN OF NUCLEAR HORMONE RECEPTOR, HORMONE RECEPTOR EXPDTA X-RAY DIFFRACTION AUTHOR V.DELFOSSE,M.GRIMALDI,W.BOURGUET REVDAT 5 16-OCT-24 3UUC 1 REMARK REVDAT 4 06-DEC-23 3UUC 1 REMARK REVDAT 3 13-SEP-23 3UUC 1 REMARK LINK REVDAT 2 26-SEP-12 3UUC 1 JRNL REVDAT 1 22-AUG-12 3UUC 0 JRNL AUTH V.DELFOSSE,M.GRIMALDI,J.L.PONS,A.BOULAHTOUF,A.LE MAIRE, JRNL AUTH 2 V.CAVAILLES,G.LABESSE,W.BOURGUET,P.BALAGUER JRNL TITL STRUCTURAL AND MECHANISTIC INSIGHTS INTO BISPHENOLS ACTION JRNL TITL 2 PROVIDE GUIDELINES FOR RISK ASSESSMENT AND DISCOVERY OF JRNL TITL 3 BISPHENOL A SUBSTITUTES. JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 14930 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 22927406 JRNL DOI 10.1073/PNAS.1203574109 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX / REFMAC REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 3 NUMBER OF REFLECTIONS : 51238 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2563 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.9083 - 5.5008 0.92 2711 143 0.2528 0.2794 REMARK 3 2 5.5008 - 4.3671 0.89 2644 140 0.1974 0.2309 REMARK 3 3 4.3671 - 3.8154 0.90 2642 139 0.1843 0.2138 REMARK 3 4 3.8154 - 3.4667 0.91 2697 142 0.1894 0.2275 REMARK 3 5 3.4667 - 3.2182 0.92 2734 143 0.1996 0.2493 REMARK 3 6 3.2182 - 3.0285 0.93 2773 146 0.2064 0.2467 REMARK 3 7 3.0285 - 2.8769 0.93 2760 146 0.2003 0.2537 REMARK 3 8 2.8769 - 2.7517 0.94 2805 147 0.2051 0.2498 REMARK 3 9 2.7517 - 2.6458 0.92 2677 141 0.2189 0.2551 REMARK 3 10 2.6458 - 2.5545 0.92 2710 143 0.2184 0.2758 REMARK 3 11 2.5545 - 2.4746 0.93 2799 147 0.2194 0.2825 REMARK 3 12 2.4746 - 2.4039 0.93 2731 144 0.2159 0.2591 REMARK 3 13 2.4039 - 2.3406 0.92 2660 140 0.2300 0.2982 REMARK 3 14 2.3406 - 2.2835 0.92 2763 145 0.2351 0.2821 REMARK 3 15 2.2835 - 2.2316 0.92 2688 142 0.2425 0.2773 REMARK 3 16 2.2316 - 2.1841 0.86 2586 136 0.2636 0.3229 REMARK 3 17 2.1841 - 2.1404 0.89 2613 138 0.2709 0.3435 REMARK 3 18 2.1404 - 2.1000 0.91 2682 141 0.2781 0.3144 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.06 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 64.59 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.17 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.06270 REMARK 3 B22 (A**2) : -5.38060 REMARK 3 B33 (A**2) : -1.68210 REMARK 3 B12 (A**2) : -0.70240 REMARK 3 B13 (A**2) : 0.79550 REMARK 3 B23 (A**2) : -0.54280 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 7281 REMARK 3 ANGLE : 0.891 9871 REMARK 3 CHIRALITY : 0.072 1171 REMARK 3 PLANARITY : 0.004 1239 REMARK 3 DIHEDRAL : 16.374 2642 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3UUC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000069218. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : SI(311) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51238 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 46.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04800 REMARK 200 FOR THE DATA SET : 10.4900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.4 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.42500 REMARK 200 FOR SHELL : 1.820 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 2QXS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM MGCL2, 100 MM BISTRIS PH 5.5, REMARK 280 25% PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -26.78602 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -52.16473 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 302 REMARK 465 LYS A 303 REMARK 465 ASN A 304 REMARK 465 PRO A 336 REMARK 465 PHE A 337 REMARK 465 SER A 338 REMARK 465 LYS A 416 REMARK 465 CYS A 417 REMARK 465 VAL A 418 REMARK 465 LEU A 462 REMARK 465 SER A 463 REMARK 465 SER A 464 REMARK 465 THR A 465 REMARK 465 LEU A 466 REMARK 465 LYS A 467 REMARK 465 CYS A 530 REMARK 465 LYS A 531 REMARK 465 ASN A 532 REMARK 465 VAL A 533 REMARK 465 VAL A 534 REMARK 465 PRO A 535 REMARK 465 LEU A 536 REMARK 465 ASP A 545 REMARK 465 ALA A 546 REMARK 465 HIS A 547 REMARK 465 ARG A 548 REMARK 465 LEU A 549 REMARK 465 HIS A 550 REMARK 465 ALA A 551 REMARK 465 PRO A 552 REMARK 465 LYS B 302 REMARK 465 LYS B 303 REMARK 465 ASN B 304 REMARK 465 SER B 305 REMARK 465 LYS B 416 REMARK 465 CYS B 417 REMARK 465 VAL B 418 REMARK 465 TYR B 459 REMARK 465 THR B 460 REMARK 465 PHE B 461 REMARK 465 LEU B 462 REMARK 465 SER B 463 REMARK 465 SER B 464 REMARK 465 THR B 465 REMARK 465 LEU B 466 REMARK 465 LYS B 467 REMARK 465 SER B 468 REMARK 465 LYS B 529 REMARK 465 CYS B 530 REMARK 465 LYS B 531 REMARK 465 ASN B 532 REMARK 465 LYS C 302 REMARK 465 LYS C 303 REMARK 465 ASN C 304 REMARK 465 SER C 305 REMARK 465 PRO C 336 REMARK 465 PHE C 337 REMARK 465 SER C 463 REMARK 465 LYS C 529 REMARK 465 CYS C 530 REMARK 465 LYS C 531 REMARK 465 ASN C 532 REMARK 465 VAL C 533 REMARK 465 VAL C 534 REMARK 465 PRO C 535 REMARK 465 LEU C 536 REMARK 465 ALA C 546 REMARK 465 HIS C 547 REMARK 465 ARG C 548 REMARK 465 LEU C 549 REMARK 465 HIS C 550 REMARK 465 ALA C 551 REMARK 465 PRO C 552 REMARK 465 LYS D 302 REMARK 465 LYS D 303 REMARK 465 ASN D 304 REMARK 465 SER D 305 REMARK 465 LEU D 306 REMARK 465 VAL D 418 REMARK 465 GLU D 419 REMARK 465 THR D 460 REMARK 465 PHE D 461 REMARK 465 LEU D 462 REMARK 465 SER D 463 REMARK 465 SER D 464 REMARK 465 THR D 465 REMARK 465 LEU D 466 REMARK 465 LYS D 467 REMARK 465 SER D 468 REMARK 465 CYS D 530 REMARK 465 LYS D 531 REMARK 465 ASN D 532 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 330 CD OE1 OE2 REMARK 470 ASP A 332 CG OD1 OD2 REMARK 470 GLU A 339 CG CD OE1 OE2 REMARK 470 MET A 342 CG SD CE REMARK 470 LEU A 372 CG CD1 CD2 REMARK 470 GLU A 397 CG CD OE1 OE2 REMARK 470 LYS A 401 CD CE NZ REMARK 470 GLN A 414 CG CD OE1 NE2 REMARK 470 GLU A 419 CG CD OE1 OE2 REMARK 470 TYR A 459 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PHE A 461 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER A 468 OG REMARK 470 LYS A 472 CG CD CE NZ REMARK 470 LYS A 481 CG CD CE NZ REMARK 470 SER A 527 OG REMARK 470 LYS A 529 CG CD CE NZ REMARK 470 TYR A 537 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 539 CG CD1 CD2 REMARK 470 LEU A 541 CG CD1 CD2 REMARK 470 LEU B 306 CG CD1 CD2 REMARK 470 LEU B 308 CG CD1 CD2 REMARK 470 ASP B 313 CG OD1 OD2 REMARK 470 GLU B 330 CG CD OE1 OE2 REMARK 470 ASP B 332 CG OD1 OD2 REMARK 470 THR B 334 OG1 CG2 REMARK 470 GLU B 339 CG CD OE1 OE2 REMARK 470 LYS B 401 CG CD CE NZ REMARK 470 GLU B 419 CG CD OE1 OE2 REMARK 470 GLU B 423 CG CD OE1 OE2 REMARK 470 LYS B 472 CG CD CE NZ REMARK 470 ARG B 477 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 492 CG CD CE NZ REMARK 470 HIS B 524 CG ND1 CD2 CE1 NE2 REMARK 470 TYR B 526 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL B 534 CG1 CG2 REMARK 470 TYR B 537 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU B 549 CG CD1 CD2 REMARK 470 LEU C 306 CG CD1 CD2 REMARK 470 THR C 334 OG1 CG2 REMARK 470 ARG C 335 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 339 CG CD OE1 OE2 REMARK 470 GLU C 397 CG CD OE1 OE2 REMARK 470 LYS C 401 CE NZ REMARK 470 LYS C 416 CG CD CE NZ REMARK 470 GLU C 419 CG CD OE1 OE2 REMARK 470 THR C 460 OG1 CG2 REMARK 470 LEU C 462 CG CD1 CD2 REMARK 470 SER C 464 OG REMARK 470 TYR C 537 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU C 539 CG CD1 CD2 REMARK 470 LEU C 541 CG CD1 CD2 REMARK 470 GLU C 542 CG CD OE1 OE2 REMARK 470 ASP C 545 CG OD1 OD2 REMARK 470 LEU D 308 CG CD1 CD2 REMARK 470 ASP D 313 CG OD1 OD2 REMARK 470 TYR D 331 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP D 332 CG OD1 OD2 REMARK 470 THR D 334 OG1 CG2 REMARK 470 GLU D 339 CG CD OE1 OE2 REMARK 470 LYS D 401 CG CD CE NZ REMARK 470 ASN D 413 CG OD1 ND2 REMARK 470 CYS D 417 SG REMARK 470 ASN D 439 CG OD1 ND2 REMARK 470 VAL D 458 CG1 CG2 REMARK 470 TYR D 459 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU D 469 CG CD1 CD2 REMARK 470 GLU D 470 CG CD OE1 OE2 REMARK 470 LYS D 472 CG CD CE NZ REMARK 470 ARG D 477 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 520 CG CD CE NZ REMARK 470 HIS D 524 CG ND1 CD2 CE1 NE2 REMARK 470 TYR D 526 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER D 527 OG REMARK 470 LYS D 529 CG CD CE NZ REMARK 470 VAL D 534 CG1 CG2 REMARK 470 TYR D 537 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU D 542 CG CD OE1 OE2 REMARK 470 LEU D 549 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 380 O HOH B 560 1.65 REMARK 500 O HOH B 217 O HOH B 281 1.97 REMARK 500 O HOH D 293 O HOH D 294 1.98 REMARK 500 O HOH B 126 O HOH B 556 2.00 REMARK 500 O HOH B 223 O HOH B 562 2.08 REMARK 500 OH TYR C 459 O HOH C 559 2.09 REMARK 500 O HOH C 52 O HOH C 275 2.12 REMARK 500 NH2 ARG A 412 OD2 ASP C 332 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 332 94.67 -172.26 REMARK 500 THR A 460 155.38 118.06 REMARK 500 LEU A 469 -45.36 73.04 REMARK 500 ALA B 307 -75.20 78.78 REMARK 500 ASP B 332 89.00 -69.34 REMARK 500 THR B 334 89.17 -30.54 REMARK 500 ASN B 413 32.84 -75.12 REMARK 500 GLN B 414 -2.09 -140.46 REMARK 500 SER B 527 50.39 -95.97 REMARK 500 GLU C 330 129.87 -39.44 REMARK 500 CYS C 417 -70.97 -53.84 REMARK 500 GLU C 419 172.64 -59.79 REMARK 500 THR C 465 159.02 -46.06 REMARK 500 ASP D 332 106.12 -58.12 REMARK 500 PRO D 333 -101.53 -88.07 REMARK 500 THR D 334 71.09 73.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0D1 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0D1 B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0D1 C 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0D1 D 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3UU7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HERA-LBD (Y537S) IN COMPLEX WITH BISPHENOL-A REMARK 900 RELATED ID: 3UUA RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HERA-LBD (Y537S) IN COMPLEX WITH BISPHENOL-AF REMARK 900 RELATED ID: 3UUD RELATED DB: PDB DBREF 3UUC A 302 552 UNP P03372 ESR1_HUMAN 302 552 DBREF 3UUC B 302 552 UNP P03372 ESR1_HUMAN 302 552 DBREF 3UUC C 302 552 UNP P03372 ESR1_HUMAN 302 552 DBREF 3UUC D 302 552 UNP P03372 ESR1_HUMAN 302 552 SEQRES 1 A 251 LYS LYS ASN SER LEU ALA LEU SER LEU THR ALA ASP GLN SEQRES 2 A 251 MET VAL SER ALA LEU LEU ASP ALA GLU PRO PRO ILE LEU SEQRES 3 A 251 TYR SER GLU TYR ASP PRO THR ARG PRO PHE SER GLU ALA SEQRES 4 A 251 SER MET MET GLY LEU LEU THR ASN LEU ALA ASP ARG GLU SEQRES 5 A 251 LEU VAL HIS MET ILE ASN TRP ALA LYS ARG VAL PRO GLY SEQRES 6 A 251 PHE VAL ASP LEU THR LEU HIS ASP GLN VAL HIS LEU LEU SEQRES 7 A 251 GLU CSO ALA TRP LEU GLU ILE LEU MET ILE GLY LEU VAL SEQRES 8 A 251 TRP ARG SER MET GLU HIS PRO GLY LYS LEU LEU PHE ALA SEQRES 9 A 251 PRO ASN LEU LEU LEU ASP ARG ASN GLN GLY LYS CYS VAL SEQRES 10 A 251 GLU GLY MET VAL GLU ILE PHE ASP MET LEU LEU ALA THR SEQRES 11 A 251 SER SER ARG PHE ARG MET MET ASN LEU GLN GLY GLU GLU SEQRES 12 A 251 PHE VAL CYS LEU LYS SER ILE ILE LEU LEU ASN SER GLY SEQRES 13 A 251 VAL TYR THR PHE LEU SER SER THR LEU LYS SER LEU GLU SEQRES 14 A 251 GLU LYS ASP HIS ILE HIS ARG VAL LEU ASP LYS ILE THR SEQRES 15 A 251 ASP THR LEU ILE HIS LEU MET ALA LYS ALA GLY LEU THR SEQRES 16 A 251 LEU GLN GLN GLN HIS GLN ARG LEU ALA GLN LEU LEU LEU SEQRES 17 A 251 ILE LEU SER HIS ILE ARG HIS MET SER ASN LYS GLY MET SEQRES 18 A 251 GLU HIS LEU TYR SER MET LYS CYS LYS ASN VAL VAL PRO SEQRES 19 A 251 LEU TYR ASP LEU LEU LEU GLU MET LEU ASP ALA HIS ARG SEQRES 20 A 251 LEU HIS ALA PRO SEQRES 1 B 251 LYS LYS ASN SER LEU ALA LEU SER LEU THR ALA ASP GLN SEQRES 2 B 251 MET VAL SER ALA LEU LEU ASP ALA GLU PRO PRO ILE LEU SEQRES 3 B 251 TYR SER GLU TYR ASP PRO THR ARG PRO PHE SER GLU ALA SEQRES 4 B 251 SER MET MET GLY LEU LEU THR ASN LEU ALA ASP ARG GLU SEQRES 5 B 251 LEU VAL HIS MET ILE ASN TRP ALA LYS ARG VAL PRO GLY SEQRES 6 B 251 PHE VAL ASP LEU THR LEU HIS ASP GLN VAL HIS LEU LEU SEQRES 7 B 251 GLU CSO ALA TRP LEU GLU ILE LEU MET ILE GLY LEU VAL SEQRES 8 B 251 TRP ARG SER MET GLU HIS PRO GLY LYS LEU LEU PHE ALA SEQRES 9 B 251 PRO ASN LEU LEU LEU ASP ARG ASN GLN GLY LYS CYS VAL SEQRES 10 B 251 GLU GLY MET VAL GLU ILE PHE ASP MET LEU LEU ALA THR SEQRES 11 B 251 SER SER ARG PHE ARG MET MET ASN LEU GLN GLY GLU GLU SEQRES 12 B 251 PHE VAL CYS LEU LYS SER ILE ILE LEU LEU ASN SER GLY SEQRES 13 B 251 VAL TYR THR PHE LEU SER SER THR LEU LYS SER LEU GLU SEQRES 14 B 251 GLU LYS ASP HIS ILE HIS ARG VAL LEU ASP LYS ILE THR SEQRES 15 B 251 ASP THR LEU ILE HIS LEU MET ALA LYS ALA GLY LEU THR SEQRES 16 B 251 LEU GLN GLN GLN HIS GLN ARG LEU ALA GLN LEU LEU LEU SEQRES 17 B 251 ILE LEU SER HIS ILE ARG HIS MET SER ASN LYS GLY MET SEQRES 18 B 251 GLU HIS LEU TYR SER MET LYS CYS LYS ASN VAL VAL PRO SEQRES 19 B 251 LEU TYR ASP LEU LEU LEU GLU MET LEU ASP ALA HIS ARG SEQRES 20 B 251 LEU HIS ALA PRO SEQRES 1 C 251 LYS LYS ASN SER LEU ALA LEU SER LEU THR ALA ASP GLN SEQRES 2 C 251 MET VAL SER ALA LEU LEU ASP ALA GLU PRO PRO ILE LEU SEQRES 3 C 251 TYR SER GLU TYR ASP PRO THR ARG PRO PHE SER GLU ALA SEQRES 4 C 251 SER MET MET GLY LEU LEU THR ASN LEU ALA ASP ARG GLU SEQRES 5 C 251 LEU VAL HIS MET ILE ASN TRP ALA LYS ARG VAL PRO GLY SEQRES 6 C 251 PHE VAL ASP LEU THR LEU HIS ASP GLN VAL HIS LEU LEU SEQRES 7 C 251 GLU CSO ALA TRP LEU GLU ILE LEU MET ILE GLY LEU VAL SEQRES 8 C 251 TRP ARG SER MET GLU HIS PRO GLY LYS LEU LEU PHE ALA SEQRES 9 C 251 PRO ASN LEU LEU LEU ASP ARG ASN GLN GLY LYS CYS VAL SEQRES 10 C 251 GLU GLY MET VAL GLU ILE PHE ASP MET LEU LEU ALA THR SEQRES 11 C 251 SER SER ARG PHE ARG MET MET ASN LEU GLN GLY GLU GLU SEQRES 12 C 251 PHE VAL CYS LEU LYS SER ILE ILE LEU LEU ASN SER GLY SEQRES 13 C 251 VAL TYR THR PHE LEU SER SER THR LEU LYS SER LEU GLU SEQRES 14 C 251 GLU LYS ASP HIS ILE HIS ARG VAL LEU ASP LYS ILE THR SEQRES 15 C 251 ASP THR LEU ILE HIS LEU MET ALA LYS ALA GLY LEU THR SEQRES 16 C 251 LEU GLN GLN GLN HIS GLN ARG LEU ALA GLN LEU LEU LEU SEQRES 17 C 251 ILE LEU SER HIS ILE ARG HIS MET SER ASN LYS GLY MET SEQRES 18 C 251 GLU HIS LEU TYR SER MET LYS CYS LYS ASN VAL VAL PRO SEQRES 19 C 251 LEU TYR ASP LEU LEU LEU GLU MET LEU ASP ALA HIS ARG SEQRES 20 C 251 LEU HIS ALA PRO SEQRES 1 D 251 LYS LYS ASN SER LEU ALA LEU SER LEU THR ALA ASP GLN SEQRES 2 D 251 MET VAL SER ALA LEU LEU ASP ALA GLU PRO PRO ILE LEU SEQRES 3 D 251 TYR SER GLU TYR ASP PRO THR ARG PRO PHE SER GLU ALA SEQRES 4 D 251 SER MET MET GLY LEU LEU THR ASN LEU ALA ASP ARG GLU SEQRES 5 D 251 LEU VAL HIS MET ILE ASN TRP ALA LYS ARG VAL PRO GLY SEQRES 6 D 251 PHE VAL ASP LEU THR LEU HIS ASP GLN VAL HIS LEU LEU SEQRES 7 D 251 GLU CSO ALA TRP LEU GLU ILE LEU MET ILE GLY LEU VAL SEQRES 8 D 251 TRP ARG SER MET GLU HIS PRO GLY LYS LEU LEU PHE ALA SEQRES 9 D 251 PRO ASN LEU LEU LEU ASP ARG ASN GLN GLY LYS CYS VAL SEQRES 10 D 251 GLU GLY MET VAL GLU ILE PHE ASP MET LEU LEU ALA THR SEQRES 11 D 251 SER SER ARG PHE ARG MET MET ASN LEU GLN GLY GLU GLU SEQRES 12 D 251 PHE VAL CYS LEU LYS SER ILE ILE LEU LEU ASN SER GLY SEQRES 13 D 251 VAL TYR THR PHE LEU SER SER THR LEU LYS SER LEU GLU SEQRES 14 D 251 GLU LYS ASP HIS ILE HIS ARG VAL LEU ASP LYS ILE THR SEQRES 15 D 251 ASP THR LEU ILE HIS LEU MET ALA LYS ALA GLY LEU THR SEQRES 16 D 251 LEU GLN GLN GLN HIS GLN ARG LEU ALA GLN LEU LEU LEU SEQRES 17 D 251 ILE LEU SER HIS ILE ARG HIS MET SER ASN LYS GLY MET SEQRES 18 D 251 GLU HIS LEU TYR SER MET LYS CYS LYS ASN VAL VAL PRO SEQRES 19 D 251 LEU TYR ASP LEU LEU LEU GLU MET LEU ASP ALA HIS ARG SEQRES 20 D 251 LEU HIS ALA PRO MODRES 3UUC CSO A 381 CYS S-HYDROXYCYSTEINE MODRES 3UUC CSO B 381 CYS S-HYDROXYCYSTEINE MODRES 3UUC CSO C 381 CYS S-HYDROXYCYSTEINE MODRES 3UUC CSO D 381 CYS S-HYDROXYCYSTEINE HET CSO A 381 7 HET CSO B 381 7 HET CSO C 381 7 HET CSO D 381 7 HET 0D1 A 1 18 HET 0D1 B 1 18 HET 0D1 C 1 18 HET 0D1 D 1 18 HETNAM CSO S-HYDROXYCYSTEINE HETNAM 0D1 4,4'-(2,2-DICHLOROETHENE-1,1-DIYL)DIPHENOL FORMUL 1 CSO 4(C3 H7 N O3 S) FORMUL 5 0D1 4(C14 H10 CL2 O2) FORMUL 9 HOH *341(H2 O) HELIX 1 1 SER A 305 LEU A 310 5 6 HELIX 2 2 THR A 311 GLU A 323 1 13 HELIX 3 3 ALA A 340 LYS A 362 1 23 HELIX 4 4 THR A 371 MET A 396 1 26 HELIX 5 5 ASN A 413 GLY A 415 5 3 HELIX 6 6 MET A 421 ASN A 439 1 19 HELIX 7 7 GLN A 441 SER A 456 1 16 HELIX 8 8 LEU A 469 ALA A 493 1 25 HELIX 9 9 THR A 496 LEU A 525 1 30 HELIX 10 10 TYR A 526 MET A 528 5 3 HELIX 11 11 ASP A 538 LEU A 544 1 7 HELIX 12 12 THR B 311 GLU B 323 1 13 HELIX 13 13 SER B 338 VAL B 364 1 27 HELIX 14 14 GLY B 366 LEU B 370 5 5 HELIX 15 15 THR B 371 MET B 396 1 26 HELIX 16 16 ASN B 413 GLY B 415 5 3 HELIX 17 17 GLY B 420 MET B 438 1 19 HELIX 18 18 GLN B 441 SER B 456 1 16 HELIX 19 19 GLU B 470 GLY B 494 1 25 HELIX 20 20 THR B 496 SER B 527 1 32 HELIX 21 21 PRO B 535 LEU B 544 1 10 HELIX 22 22 LEU C 306 LEU C 310 5 5 HELIX 23 23 THR C 311 ALA C 322 1 12 HELIX 24 24 ALA C 340 LYS C 362 1 23 HELIX 25 25 THR C 371 SER C 395 1 25 HELIX 26 26 ARG C 412 LYS C 416 1 5 HELIX 27 27 MET C 421 ASN C 439 1 19 HELIX 28 28 GLN C 441 SER C 456 1 16 HELIX 29 29 GLY C 457 PHE C 461 5 5 HELIX 30 30 THR C 465 ALA C 493 1 29 HELIX 31 31 THR C 496 LEU C 525 1 30 HELIX 32 32 ASP C 538 ASP C 545 1 8 HELIX 33 33 THR D 311 GLU D 323 1 13 HELIX 34 34 SER D 338 ARG D 363 1 26 HELIX 35 35 GLY D 366 LEU D 370 5 5 HELIX 36 36 THR D 371 SER D 395 1 25 HELIX 37 37 ARG D 412 CYS D 417 1 6 HELIX 38 38 MET D 421 ASN D 439 1 19 HELIX 39 39 GLN D 441 SER D 456 1 16 HELIX 40 40 GLU D 470 ALA D 493 1 24 HELIX 41 41 THR D 496 LYS D 529 1 34 HELIX 42 42 PRO D 535 LEU D 544 1 10 SHEET 1 A 2 LYS A 401 ALA A 405 0 SHEET 2 A 2 LEU A 408 ASP A 411 -1 O LEU A 410 N LEU A 402 SHEET 1 B 2 LYS B 401 ALA B 405 0 SHEET 2 B 2 LEU B 408 ASP B 411 -1 O LEU B 410 N LEU B 402 SHEET 1 C 2 LYS C 401 ALA C 405 0 SHEET 2 C 2 LEU C 408 ASP C 411 -1 O LEU C 410 N LEU C 402 SHEET 1 D 2 LYS D 401 ALA D 405 0 SHEET 2 D 2 LEU D 408 ASP D 411 -1 O LEU D 410 N LEU D 402 LINK C GLU A 380 N CSO A 381 1555 1555 1.33 LINK C CSO A 381 N ALA A 382 1555 1555 1.33 LINK C GLU B 380 N CSO B 381 1555 1555 1.33 LINK C CSO B 381 N ALA B 382 1555 1555 1.33 LINK C GLU C 380 N CSO C 381 1555 1555 1.33 LINK C CSO C 381 N ALA C 382 1555 1555 1.33 LINK C GLU D 380 N CSO D 381 1555 1555 1.33 LINK C CSO D 381 N ALA D 382 1555 1555 1.33 CISPEP 1 ARG B 335 PRO B 336 0 2.25 CISPEP 2 ALA B 551 PRO B 552 0 -6.60 CISPEP 3 ARG D 335 PRO D 336 0 5.68 CISPEP 4 ALA D 551 PRO D 552 0 -0.85 SITE 1 AC1 7 THR A 347 ALA A 350 GLU A 353 LEU A 387 SITE 2 AC1 7 ARG A 394 MET A 421 LEU A 428 SITE 1 AC2 8 HOH B 47 LEU B 346 THR B 347 ALA B 350 SITE 2 AC2 8 GLU B 353 LEU B 387 ARG B 394 MET B 421 SITE 1 AC3 7 HOH C 9 LEU C 346 THR C 347 ALA C 350 SITE 2 AC3 7 GLU C 353 LEU C 387 ARG C 394 SITE 1 AC4 8 HOH D 33 LEU D 346 THR D 347 ALA D 350 SITE 2 AC4 8 GLU D 353 LEU D 387 ARG D 394 MET D 421 CRYST1 53.530 58.640 93.020 75.64 74.77 62.82 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018681 -0.009594 -0.003696 0.00000 SCALE2 0.000000 0.019171 -0.002892 0.00000 SCALE3 0.000000 0.000000 0.011268 0.00000